Pregenerated sensors for CYP3A11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056035Ensembl transcript IDs: ENSMUST00000035918.8
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTAAAGTGGGTGGGAAAGGAGGTAAGATAGAATCTAGGAAGAGTTaGTCAAAAGGAATTAATGTGATCAAAATGTATTCTATGAAGTTC | + |
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Preference number: 1 (lower is better) Translates to: CKVGGKGGKIESRKS*SKGINVIKMYSMKF Trigger: GAACTTCATAGAATACATTTTGATCACATTAATTCCTTTTGACCAACTCTTCCTAGATTCTATCTTACCTCCTTTCCCACCCACTTTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035918.8 |
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| 3UTR-3UTR GCA 90 bp | GGATGTACTGAATCTTTAACCAGGCATCAAAACCAATCTATTAAGCCCCTTATTGATGTTCTTAGACACTaGCTTTCTGAAGAACTCAGA | + |
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Preference number: 2 (lower is better) Translates to: GCTESLTRHQNQSIKPLIDVLRH*LSEELR Trigger: TCTGAGTTCTTCAGAAAGGCAGTGTCTAAGAACATC...AATAAGGGGCTTAATAGATTGGTTTTGATGCCTGGTTAAAGATTCAGTACATCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035918.8 |
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| CDS-3UTR TCA 90 bp | GGATGTACTGAATCTTTAACCAGGCATCAAAACCAATCTATTAAGCCCCTTATTAGAGGAGCACCAAGCTaGTTGCTAGGAGCACCCAGG | + |
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Preference number: 4 (lower is better) Translates to: GCTESLTRHQNQSIKPLIRGAPS*LLGAPR Trigger: CCTGGGTGCTCCTAGCAATCAGCTTGGTGCTCCTCT...AATAAGGGGCTTAATAGATTGGTTTTGATGCCTGGTTAAAGATTCAGTACATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035918.8 |
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| CDS-3UTR CCA 90 bp | GGATGTACTGAATCTTTAACCAGGCATCAAAACCAATCTATTAAGCCCCTTATTTGCCAAGGCAGTTCCTaGGTCCATTCCCAAAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: GCTESLTRHQNQSIKPLICQGSS*VHSQRA Trigger: TGCCCTTTGGGAATGGACCCAGGAACTGCCTTGGCA...AATAAGGGGCTTAATAGATTGGTTTTGATGCCTGGTTAAAGATTCAGTACATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035918.8 |
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| CDS-3UTR TCA 90 bp | GGATGTACTGAATCTTTAACCAGGCATCAAAACCAATCTATTAAGCCCCTTATTCCAAGGAATGCAGGGTaGAGGAAAGTGTGCTACTGG | + |
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Preference number: 4 (lower is better) Translates to: GCTESLTRHQNQSIKPLIPRNAG*RKVCYW Trigger: CCAGTAGCACACTTTCCTTCACCCTGCATTCCTTGG...AATAAGGGGCTTAATAGATTGGTTTTGATGCCTGGTTAAAGATTCAGTACATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035918.8 |
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| CDS-3UTR TCA 90 bp | GGATGTACTGAATCTTTAACCAGGCATCAAAACCAATCTATTAAGCCCCTTATTTTCTGGATATCAGGGTaGGTGGCCAAGGAATGCAGG | + |
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Preference number: 4 (lower is better) Translates to: GCTESLTRHQNQSIKPLIFWISG*VAKECR Trigger: CCTGCATTCCTTGGCCACTCACCCTGATATCCAGAA...AATAAGGGGCTTAATAGATTGGTTTTGATGCCTGGTTAAAGATTCAGTACATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035918.8 |
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| CDS-3UTR GCA 90 bp | GGATGTACTGAATCTTTAACCAGGCATCAAAACCAATCTATTAAGCCCCTTATTTCCACTCGGTGCTTCTaGTTAGAATCCAGGCGGCTT | + |
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Preference number: 4 (lower is better) Translates to: GCTESLTRHQNQSIKPLISTRCF*LESRRL Trigger: AAGCCGCCTGGATTCTAAGCAGAAGCACCGAGTGGA...AATAAGGGGCTTAATAGATTGGTTTTGATGCCTGGTTAAAGATTCAGTACATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035918.8 |
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| CDS-3UTR TCA 90 bp | GGATGTACTGAATCTTTAACCAGGCATCAAAACCAATCTATTAAGCCCCTTATTAATCCCGCCGGTTTGTaGAGACAGAAAAACATTCCT | + |
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Preference number: 4 (lower is better) Translates to: GCTESLTRHQNQSIKPLINPAGL*RQKNIP Trigger: AGGAATGTTTTTCTGTCTTCACAAACCGGCGGGATT...AATAAGGGGCTTAATAGATTGGTTTTGATGCCTGGTTAAAGATTCAGTACATCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035918.8 |
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| CDS-3UTR TCA 90 bp | GGATGTACTGAATCTTTAACCAGGCATCAAAACCAATCTATTAAGCCCCTTATTTGGAATCATCACTGTTaGCCCTTTGGGGATATACAC | + |
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Preference number: 4 (lower is better) Translates to: GCTESLTRHQNQSIKPLIWNHHC*PFGDIH Trigger: GTGTATATCCCCAAAGGGTCAACAGTGATGATTCCA...AATAAGGGGCTTAATAGATTGGTTTTGATGCCTGGTTAAAGATTCAGTACATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035918.8 |
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| CDS-3UTR CCA 90 bp | GGATGTACTGAATCTTTAACCAGGCATCAAAACCAATCTATTAAGCCCCTTATTCTGAACCTTTCAGGTTaGAATTCTTCAGGCTCTGAC | + |
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Preference number: 4 (lower is better) Translates to: GCTESLTRHQNQSIKPLILNLSG*NSSGSD Trigger: GTCAGAGCCTGAAGAATTCCAACCTGAAAGGTTCAG...AATAAGGGGCTTAATAGATTGGTTTTGATGCCTGGTTAAAGATTCAGTACATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035918.8 |
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| CDS-3UTR TCA 90 bp | GGATGTACTGAATCTTTAACCAGGCATCAAAACCAATCTATTAAGCCCCTTATTTCAGAAAGGGCTTTATaGGAGACTTTGTCTTTGGAA | + |
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Preference number: 4 (lower is better) Translates to: GCTESLTRHQNQSIKPLISERAL*ETLSLE Trigger: TTCCAAAGACAAAGTCTCTCATAAAGCCCTTTCTGA...AATAAGGGGCTTAATAGATTGGTTTTGATGCCTGGTTAAAGATTCAGTACATCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035918.8 |
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| CDS-3UTR GCA 90 bp | GGATGTACTGAATCTTTAACCAGGCATCAAAACCAATCTATTAAGCCCCTTATTCCTTTCTTTGCCTTCTaGCTCAAGTACTTTACCAAA | + |
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Preference number: 4 (lower is better) Translates to: GCTESLTRHQNQSIKPLIPFFAF*LKYFTK Trigger: TTTGGTAAAGTACTTGAGGCAGAAGGCAAAGAAAGG...AATAAGGGGCTTAATAGATTGGTTTTGATGCCTGGTTAAAGATTCAGTACATCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035918.8 |
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| CDS-3UTR GCA 90 bp | GGATGTACTGAATCTTTAACCAGGCATCAAAACCAATCTATTAAGCCCCTTATTTGGAAGGAGAAGTTCTaGATAATTTTAGTGAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: GCTESLTRHQNQSIKPLIWKEKF*IILVRA Trigger: TGCTCTCACTAAAATTATGCAGAACTTCTCCTTCCA...AATAAGGGGCTTAATAGATTGGTTTTGATGCCTGGTTAAAGATTCAGTACATCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035918.8 |
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| CDS-3UTR CCA 90 bp | GGATGTACTGAATCTTTAACCAGGCATCAAAACCAATCTATTAAGCCCCTTATTATAAAGATAATTGACTaGGCTGTGATCTCCATGTCA | + |
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Preference number: 4 (lower is better) Translates to: GCTESLTRHQNQSIKPLIIKIID*AVISMS Trigger: TGACATGGAGATCACAGCCCAGTCAATTATCTTTAT...AATAAGGGGCTTAATAGATTGGTTTTGATGCCTGGTTAAAGATTCAGTACATCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035918.8 |
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| CDS TCA 90 bp | AGGGCAGATATACATAAGGATCAATGCTGCCCTTGTTCTCCTTGCTaGACCTTTCAGGTTGGAATTCTTCAGGCTCTGACCAGTGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: RADIHKDQCCPCSPC*TFQVGILQALTSAV Trigger: CACAGCACTGGTCAGAGCCTGAAGAATTCCAACCTGAAAGGTTCAGCAAGGAGAACAAGGGCAGCATTGATCCTTATGTATATCTGCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035918.8 |
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| CDS-3UTR CAA 90 bp | GGATGTACTGAATCTTTAACCAGGCATCAAAACCAATCTATTAAGCCCCTTATTGTGGGAGGTGCCTTGTaGGGCAGAGCCTCATCGATC | + |
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Preference number: 5 (lower is better) Translates to: GCTESLTRHQNQSIKPLIVGGAL*GRASSI Trigger: GATCGATGAGGCTCTGCCCAACAAGGCACCTCCCAC...AATAAGGGGCTTAATAGATTGGTTTTGATGCCTGGTTAAAGATTCAGTACATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035918.8 |
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| CDS-3UTR CAA 90 bp | GGATGTACTGAATCTTTAACCAGGCATCAAAACCAATCTATTAAGCCCCTTATTGGATCCTCTGGGTTGTaGAGGGAATCCACGTTCACT | + |
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Preference number: 5 (lower is better) Translates to: GCTESLTRHQNQSIKPLIGSSGL*RESTFT Trigger: AGTGAACGTGGATTCCCTCAACAACCCAGAGGATCC...AATAAGGGGCTTAATAGATTGGTTTTGATGCCTGGTTAAAGATTCAGTACATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035918.8 |
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| CDS-3UTR CAA 90 bp | GGATGTACTGAATCTTTAACCAGGCATCAAAACCAATCTATTAAGCCCCTTATTCAGGCTTGCCTTTCTTaGCCTTCTGCCTCAAGTACT | + |
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Preference number: 5 (lower is better) Translates to: GCTESLTRHQNQSIKPLIQACLS*PSASST Trigger: AGTACTTGAGGCAGAAGGCAAAGAAAGGCAAGCCTG...AATAAGGGGCTTAATAGATTGGTTTTGATGCCTGGTTAAAGATTCAGTACATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035918.8 |
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| CDS-3UTR CAA 90 bp | GGATGTACTGAATCTTTAACCAGGCATCAAAACCAATCTATTAAGCCCCTTATTGGATCAATGCTGCCCTaGTTCTCCTTGCTGAACCTT | + |
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Preference number: 5 (lower is better) Translates to: GCTESLTRHQNQSIKPLIGSMLP*FSLLNL Trigger: AAGGTTCAGCAAGGAGAACAAGGGCAGCATTGATCC...AATAAGGGGCTTAATAGATTGGTTTTGATGCCTGGTTAAAGATTCAGTACATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035918.8 |
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| CDS-3UTR CAA 90 bp | GGATGTACTGAATCTTTAACCAGGCATCAAAACCAATCTATTAAGCCCCTTATTACAGGGAACATCTCCTaGAGTTTTCCACTGGTGAAT | + |
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Preference number: 5 (lower is better) Translates to: GCTESLTRHQNQSIKPLITGNIS*SFPLVN Trigger: ATTCACCAGTGGAAAACTCAAGGAGATGTTCCCTGT...AATAAGGGGCTTAATAGATTGGTTTTGATGCCTGGTTAAAGATTCAGTACATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035918.8 |
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| CDS-3UTR CAA 90 bp | GGATGTACTGAATCTTTAACCAGGCATCAAAACCAATCTATTAAGCCCCTTATTTTCATAGTAACAGGCTaGCCTTTCTTTGCCTTCTGC | + |
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Preference number: 5 (lower is better) Translates to: GCTESLTRHQNQSIKPLIFIVTG*PFFAFC Trigger: GCAGAAGGCAAAGAAAGGCAAGCCTGTTACTATGAA...AATAAGGGGCTTAATAGATTGGTTTTGATGCCTGGTTAAAGATTCAGTACATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035918.8 |
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| CDS CCA 72 bp | ATGCTGCCCTTGTTCTCCTTGCTGAACCTTTCAGGTTaGAATTCTTCAGGCTCTGACCAGTGCTGTGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: MLPLFSLLNLSG*NSSGSDQCCGS Trigger: TGACCCACAGCACTGGTCAGAGCCTGAAGAATTCCAACCTGAAAGGTTCAGCAAGGAGAACAAGGGCAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035918.8 |
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| CDS CCA 72 bp | TCTCCATCACAGTATCATACGTGGGAGGTGCCTTGTTaGGCAGAGCCTCATCGATCTCATCCTGCAGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: SPSQYHTWEVPC*AEPHRSHPAVF Trigger: AAAAACTGCAGGATGAGATCGATGAGGCTCTGCCCAACAAGGCACCTCCCACGTATGATACTGTGATGGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035918.8 |
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| CDS TCA 72 bp | ATACATAAGGATCAATGCTGCCCTTGTTCTCCTTGCTaGACCTTTCAGGTTGGAATTCTTCAGGCTCTGACC | + |
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Preference number: 6 (lower is better) Translates to: IHKDQCCPCSPC*TFQVGILQALT Trigger: GGTCAGAGCCTGAAGAATTCCAACCTGAAAGGTTCAGCAAGGAGAACAAGGGCAGCATTGATCCTTATGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035918.8 |
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| CDS GCA 72 bp | CGAATTTCCATAAACCCTTGTAATAATTCAGCACAGTaGCTAAAAATGGCAGAGGTTTGGGCCCAGGAATTC | + |
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Preference number: 6 (lower is better) Translates to: RISINPCNNSAQ*LKMAEVWAQEF Trigger: GAATTCCTGGGCCCAAACCTCTGCCATTTTTAGGCACTGTGCTGAATTATTACAAGGGTTTATGGAAATTCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035918.8 |
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| CDS CCA 72 bp | CCATGTCAGAAAGGGCTTTATGAGAGACTTTGTCTTTaGAATTATTATGAGAATTCATCATCAGCTGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: PCQKGLYERLCL*NYYENSSSAEE Trigger: TTCTTCAGCTGATGATGAATTCTCATAATAATTCCAAAGACAAAGTCTCTCATAAAGCCCTTTCTGACATGG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035918.8 |
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