Pregenerated sensors for CYP39A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023963Ensembl transcript IDs: ENSMUST00000170988.2, ENSMUST00000233165.2, ENSMUST00000233437.2, ENSMUST00000233627.2
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGCCAGGCTGGGCTGCAACACTACCCTGCTGTGGACTTGGGAGCTaGCTTCTCCAGTGCACCGAGCCTGCTGAGGGAAGCTCTGAGCTG | + |
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Preference number: 1 (lower is better) Translates to: LPGWAATLPCCGLGS*LLQCTEPAEGSSEL Trigger: CAGCTCAGAGCTTCCCTCAGCAGGCTCGGTGCACTGGAGAAGGCAGCTCCCAAGTCCACAGCAGGGTAGTGTTGCAGCCCAGCCTGGCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170988.2 ENSMUST00000233165.2 |
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| 3UTR GCA 90 bp | GCTGCAACACTACCCTGCTGTGGACTTGGGAGCTGCCTTCTCCAGTaGACCGAGCCTGCTGAGGGAAGCTCTGAGCTGCCAGTTGAGCTC | + |
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Preference number: 1 (lower is better) Translates to: AATLPCCGLGSCLLQ*TEPAEGSSELPVEL Trigger: GAGCTCAACTGGCAGCTCAGAGCTTCCCTCAGCAGGCTCGGTGCACTGGAGAAGGCAGCTCCCAAGTCCACAGCAGGGTAGTGTTGCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170988.2 ENSMUST00000233165.2 |
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| 3UTR GCA 90 bp | TTCCCACAGGAAACAGCTGTTACTGCAGAACCTGCCAGGCTGGGCTaGAACACTACCCTGCTGTGGACTTGGGAGCTGCCTTCTCCAGTG | + |
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Preference number: 1 (lower is better) Translates to: FPQETAVTAEPARLG*NTTLLWTWELPSPV Trigger: CACTGGAGAAGGCAGCTCCCAAGTCCACAGCAGGGTAGTGTTGCAGCCCAGCCTGGCAGGTTCTGCAGTAACAGCTGTTTCCTGTGGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170988.2 ENSMUST00000233165.2 |
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| 3UTR CCA 90 bp | ATCCCTTCCCACAGGAAACAGCTGTTACTGCAGAACCTGCCAGGCTaGGCTGCAACACTACCCTGCTGTGGACTTGGGAGCTGCCTTCTC | + |
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Preference number: 1 (lower is better) Translates to: IPSHRKQLLLQNLPG*AATLPCCGLGSCLL Trigger: GAGAAGGCAGCTCCCAAGTCCACAGCAGGGTAGTGTTGCAGCCCAGCCTGGCAGGTTCTGCAGTAACAGCTGTTTCCTGTGGGAAGGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170988.2 ENSMUST00000233165.2 |
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| 3UTR GCA 90 bp | GCTGCCTTCTCCAGTGCACCGAGCCTGCTGAGGGAAGCTCTGAGCTaGCAGTTGAGCTCCAGAATCAATTCACTCATTGCGAAGAGTGGA | + |
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Preference number: 1 (lower is better) Translates to: AAFSSAPSLLREALS*QLSSRINSLIAKSG Trigger: TCCACTCTTCGCAATGAGTGAATTGATTCTGGAGCTCAACTGGCAGCTCAGAGCTTCCCTCAGCAGGCTCGGTGCACTGGAGAAGGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170988.2 ENSMUST00000233165.2 |
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| 3UTR CCA 90 bp | CTCATTGCGAAGAGTGGACACTCTCGAAAGCACTGGTCAGTCTTCTaGAGACCTGTGTCCTTGTCAGTGAGGAAAAGGAGAGTCAACAAT | + |
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Preference number: 1 (lower is better) Translates to: LIAKSGHSRKHWSVF*RPVSLSVRKRRVNN Trigger: ATTGTTGACTCTCCTTTTCCTCACTGACAAGGACACAGGTCTCCAGAAGACTGACCAGTGCTTTCGAGAGTGTCCACTCTTCGCAATGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170988.2 ENSMUST00000233165.2 |
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| 3UTR TCA 90 bp | CGTAGCTTCACTCCTCTAGAAGGTTCTGAATCTCTTGAGTCCCAATaGAAGTCAAGCTCTTTGTTTATATTCAATCCGGCATTTCCCTGC | + |
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Preference number: 1 (lower is better) Translates to: RSFTPLEGSESLESQ*KSSSLFIFNPAFPC Trigger: GCAGGGAAATGCCGGATTGAATATAAACAAAGAGCTTGACTTTCATTGGGACTCAAGAGATTCAGAACCTTCTAGAGGAGTGAAGCTACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233627.2 |
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| 3UTR TCA 90 bp | AAGAAGCCTGAGAAGAGATATACAGCCACCATGAAATGTCAGAGATaGACTCTTACTGGATTTTGGCGGATGAATGATGGTGCCGTTTTT | + |
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Preference number: 1 (lower is better) Translates to: KKPEKRYTATMKCQR*TLTGFWRMNDGAVF Trigger: AAAAACGGCACCATCATTCATCCGCCAAAATCCAGTAAGAGTTCATCTCTGACATTTCATGGTGGCTGTATATCTCTTCTCAGGCTTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170988.2 |
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| 3UTR-3UTR TCA 90 bp | GAACCTGCCAGGCTGGGCTGCAACACTACCCTGCTGTGGACTTGGGAGCTGCCTCTGTGTCCTTGTCAGTaGGGAAAAGGAGAGTCAACA | + |
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Preference number: 2 (lower is better) Translates to: EPARLGCNTTLLWTWELPLCPCQ*GKGEST Trigger: TGTTGACTCTCCTTTTCCTCACTGACAAGGACACAG...AGGCAGCTCCCAAGTCCACAGCAGGGTAGTGTTGCAGCCCAGCCTGGCAGGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170988.2 ENSMUST00000233165.2 |
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| 3UTR-3UTR GCA 90 bp | CTTCCCCAGATCCACTGTTCATGTTTCATTTCCGAAAAGAGCAGGTCTCCCAGGAATCCGGCATTTCCCTaGAGGCTGGGGGACACCCAC | + |
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Preference number: 2 (lower is better) Translates to: LPQIHCSCFISEKSRSPRNPAFP*RLGDTH Trigger: GTGGGTGTCCCCCAGCCTGCAGGGAAATGCCGGATT...CCTGGGAGACCTGCTCTTTTCGGAAATGAAACATGAACAGTGGATCTGGGGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000233627.2 |
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| 3UTR CAA 90 bp | TTCTCCAGTGCACCGAGCCTGCTGAGGGAAGCTCTGAGCTGCCAGTaGAGCTCCAGAATCAATTCACTCATTGCGAAGAGTGGACACTCT | + |
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Preference number: 2 (lower is better) Translates to: FSSAPSLLREALSCQ*SSRINSLIAKSGHS Trigger: AGAGTGTCCACTCTTCGCAATGAGTGAATTGATTCTGGAGCTCAACTGGCAGCTCAGAGCTTCCCTCAGCAGGCTCGGTGCACTGGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170988.2 ENSMUST00000233165.2 |
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| 3UTR CAA 90 bp | GGACACTCTCGAAAGCACTGGTCAGTCTTCTGGAGACCTGTGTCCTaGTCAGTGAGGAAAAGGAGAGTCAACAATTTCCAACTTCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: GHSRKHWSVFWRPVS*SVRKRRVNNFQLQE Trigger: CTCCTGAAGTTGGAAATTGTTGACTCTCCTTTTCCTCACTGACAAGGACACAGGTCTCCAGAAGACTGACCAGTGCTTTCGAGAGTGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170988.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCCGAAAAGAGCAGGTCTCCCAGGGATACCACAAAGACATGGTATAACCAGAGGGACACCCACCAAATaGCGAGAACTCTGCTTTGGT | + |
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Preference number: 2 (lower is better) Translates to: FPKRAGLPGIPQRHGITRGTPTK*RELCFG Trigger: ACCAAAGCAGAGTTCTCGTCATTTGGTGGGTGTCCC...TCTGGTTATACCATGTCTTTGTGGTATCCCTGGGAGACCTGCTCTTTTCGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233627.2 |
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| 3UTR-3UTR GCA 90 bp | TTTCCGAAAAGAGCAGGTCTCCCAGGGATACCACAAAGACATGGTATAACCAGAGTCTTTAGGTCGAGGTaGTGGGAGGATAGTAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: FPKRAGLPGIPQRHGITRVFRSR*WEDSSW Trigger: CCAGCTACTATCCTCCCAGCACCTCGACCTAAAGAC...TCTGGTTATACCATGTCTTTGTGGTATCCCTGGGAGACCTGCTCTTTTCGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
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| 3UTR-3UTR CCA 90 bp | TGGAGACCTGTGTCCTTGTCAGTGAGGAAAAGGAGAGTCAACAATTTCCAACTTTTTAGGTCGAGGTGCTaGGAGGATAGTAGCTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: WRPVSLSVRKRRVNNFQLFRSRC*EDSSWA Trigger: TGCCCAGCTACTATCCTCCCAGCACCTCGACCTAAA...AAGTTGGAAATTGTTGACTCTCCTTTTCCTCACTGACAAGGACACAGGTCTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170988.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCCCCAGATCCACTGTTCATGTTTCATTTCCGAAAAGAGCAGGTCTCCCAGGCGAGCAAAGATCATTTaGTTCAAAAGAGTGCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: LPQIHCSCFISEKSRSPRRAKII*FKRVLP Trigger: GGGAAGCACTCTTTTGAATCAAATGATCTTTGCTCG...CCTGGGAGACCTGCTCTTTTCGGAAATGAAACATGAACAGTGGATCTGGGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
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| 3UTR-3UTR TCA 90 bp | CCTTCTTCCCCAGATCCACTGTTCATGTTTCATTTCCGAAAAGAGCAGGTCTCCCGAGCAAAGATCATTTaGTTCAAAAGAGTGCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: PSSPDPLFMFHFRKEQVSRAKII*FKRVLP Trigger: GGGAAGCACTCTTTTGAATCAAATGATCTTTGCTCG...GGAGACCTGCTCTTTTCGGAAATGAAACATGAACAGTGGATCTGGGGAAGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCACCAATATCGTAAAACACTATTTATCTACATTTCTGAGCACTACGCATGTGTCTTTAGGTCGAGGTaGTGGGAGGATAGTAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: PHQYRKTLFIYISEHYACVFRSR*WEDSSW Trigger: CCAGCTACTATCCTCCCAGCACCTCGACCTAAAGAC...ACATGCGTAGTGCTCAGAAATGTAGATAAATAGTGTTTTACGATATTGGTGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
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| 3UTR-3UTR TCA 90 bp | GTTCCCCACCTTCCTTCTTCCCCAGATCCACTGTTCATGTTTCATTTCCGAAAAATTTATCTACATTTCTaGGCACTACGCATGTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: VPHLPSSPDPLFMFHFRKIYLHF*ALRMSA Trigger: TGCAGACATGCGTAGTGCTCAGAAATGTAGATAAAT...TTTTCGGAAATGAAACATGAACAGTGGATCTGGGGAAGAAGGAAGGTGGGGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
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| 3UTR-3UTR TCA 90 bp | TCATGTTTCATTTCCGAAAAGAGCAGGTCTCCCAGGGATACCACAAAGACATGGATTTATCTACATTTCTaGGCACTACGCATGTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: SCFISEKSRSPRDTTKTWIYLHF*ALRMSA Trigger: TGCAGACATGCGTAGTGCTCAGAAATGTAGATAAAT...CCATGTCTTTGTGGTATCCCTGGGAGACCTGCTCTTTTCGGAAATGAAACATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
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| 3UTR-3UTR CCA 90 bp | ACCAATATCGTAAAACACTATTTATCTACATTTCTGAGCACTACGCATGTCTGCTTTAGGTCGAGGTGCTaGGAGGATAGTAGCTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: TNIVKHYLSTFLSTTHVCFRSRC*EDSSWA Trigger: TGCCCAGCTACTATCCTCCCAGCACCTCGACCTAAA...GCAGACATGCGTAGTGCTCAGAAATGTAGATAAATAGTGTTTTACGATATTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
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| 3UTR GCA 72 bp | TGGGCTGCAACACTACCCTGCTGTGGACTTGGGAGCTaGCTTCTCCAGTGCACCGAGCCTGCTGAGGGAAGC | + |
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Preference number: 3 (lower is better) Translates to: WAATLPCCGLGS*LLQCTEPAEGS Trigger: GCTTCCCTCAGCAGGCTCGGTGCACTGGAGAAGGCAGCTCCCAAGTCCACAGCAGGGTAGTGTTGCAGCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170988.2 ENSMUST00000233165.2 |
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| 3UTR GCA 72 bp | CTGCAGAACCTGCCAGGCTGGGCTGCAACACTACCCTaGTGTGGACTTGGGAGCTGCCTTCTCCAGTGCACC | + |
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Preference number: 3 (lower is better) Translates to: LQNLPGWAATLP*CGLGSCLLQCT Trigger: GGTGCACTGGAGAAGGCAGCTCCCAAGTCCACAGCAGGGTAGTGTTGCAGCCCAGCCTGGCAGGTTCTGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170988.2 ENSMUST00000233165.2 |
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| 3UTR GCA 72 bp | GAAACAGCTGTTACTGCAGAACCTGCCAGGCTGGGCTaGAACACTACCCTGCTGTGGACTTGGGAGCTGCCT | + |
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Preference number: 3 (lower is better) Translates to: ETAVTAEPARLG*NTTLLWTWELP Trigger: AGGCAGCTCCCAAGTCCACAGCAGGGTAGTGTTGCAGCCCAGCCTGGCAGGTTCTGCAGTAACAGCTGTTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170988.2 ENSMUST00000233165.2 |
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| 3UTR GCA 72 bp | TCCCTTCCCACAGGAAACAGCTGTTACTGCAGAACCTaGCAGGCTGGGCTGCAACACTACCCTGCTGTGGAC | + |
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Preference number: 3 (lower is better) Translates to: SLPTGNSCYCRT*QAGLQHYPAVD Trigger: GTCCACAGCAGGGTAGTGTTGCAGCCCAGCCTGGCAGGTTCTGCAGTAACAGCTGTTTCCTGTGGGAAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170988.2 ENSMUST00000233165.2 |
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| 3UTR CCA 72 bp | CACAGGAAACAGCTGTTACTGCAGAACCTGCCAGGCTaGGCTGCAACACTACCCTGCTGTGGACTTGGGAGC | + |
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Preference number: 3 (lower is better) Translates to: HRKQLLLQNLPG*AATLPCCGLGS Trigger: GCTCCCAAGTCCACAGCAGGGTAGTGTTGCAGCCCAGCCTGGCAGGTTCTGCAGTAACAGCTGTTTCCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170988.2 ENSMUST00000233165.2 |
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| 3UTR TCA 72 bp | GGAAGACGCTACCCTGGGCATAACAGAGTACAGGAATaGCCGCGGCATGGGAACTCAGCCCCACCAATATCG | + |
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Preference number: 3 (lower is better) Translates to: GRRYPGHNRVQE*PRHGNSAPPIS Trigger: CGATATTGGTGGGGCTGAGTTCCCATGCCGCGGTCATTCCTGTACTCTGTTATGCCCAGGGTAGCGTCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
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| 3UTR TCA 72 bp | CGGCATTTCCCTGCAGGCTGGGGGACACCCACCAAATaGCGAGAACTCTGCTTTGGTAATGGGTCCAGAAGA | + |
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Preference number: 3 (lower is better) Translates to: RHFPAGWGTPTK*RELCFGNGSRR Trigger: TCTTCTGGACCCATTACCAAAGCAGAGTTCTCGTCATTTGGTGGGTGTCCCCCAGCCTGCAGGGAAATGCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233627.2 |
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| 3UTR GCA 72 bp | GAGCTGCCAGTTGAGCTCCAGAATCAATTCACTCATTaGGAAGAGTGGACACTCTCGAAAGCACTGGTCAGT | + |
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Preference number: 3 (lower is better) Translates to: ELPVELQNQFTH*EEWTLSKALVS Trigger: ACTGACCAGTGCTTTCGAGAGTGTCCACTCTTCGCAATGAGTGAATTGATTCTGGAGCTCAACTGGCAGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170988.2 ENSMUST00000233165.2 |
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| 3UTR GCA 72 bp | TCAAGCTCTTTGTTTATATTCAATCCGGCATTTCCCTaGAGGCTGGGGGACACCCACCAAATGACGAGAACT | + |
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Preference number: 3 (lower is better) Translates to: SSSLFIFNPAFP*RLGDTHQMTRT Trigger: AGTTCTCGTCATTTGGTGGGTGTCCCCCAGCCTGCAGGGAAATGCCGGATTGAATATAAACAAAGAGCTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233627.2 |
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| 3UTR TCA 72 bp | ACTGGTCAGTCTTCTGGAGACCTGTGTCCTTGTCAGTaGGGAAAAGGAGAGTCAACAATTTCCAACTTCAGG | + |
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Preference number: 3 (lower is better) Translates to: TGQSSGDLCPCQ*GKGESTISNFR Trigger: CCTGAAGTTGGAAATTGTTGACTCTCCTTTTCCTCACTGACAAGGACACAGGTCTCCAGAAGACTGACCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170988.2 |
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| 3UTR GCA 72 bp | AATTGGGGTGTCTATGTTTCTGACAGTGAAATCTGGTaGACGGTCCTCAGATTTGAAATCCATGAGCCAGTA | + |
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Preference number: 3 (lower is better) Translates to: NWGVYVSDSEIW*TVLRFEIHEPV Trigger: TACTGGCTCATGGATTTCAAATCTGAGGACCGTGCACCAGATTTCACTGTCAGAAACATAGACACCCCAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
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| 3UTR CCA 72 bp | TTGAATTGGGGTGTCTATGTTTCTGACAGTGAAATCTaGTGCACGGTCCTCAGATTTGAAATCCATGAGCCA | + |
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Preference number: 3 (lower is better) Translates to: LNWGVYVSDSEI*CTVLRFEIHEP Trigger: TGGCTCATGGATTTCAAATCTGAGGACCGTGCACCAGATTTCACTGTCAGAAACATAGACACCCCAATTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
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| 3UTR-3UTR CAA 90 bp | CCCCACCAATATCGTAAAACACTATTTATCTACATTTCTGAGCACTACGCATGTGACGAGAACTCTGCTTaGGTAATGGGTCCAGAAGAC | + |
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Preference number: 3 (lower is better) Translates to: PHQYRKTLFIYISEHYACDENSA*VMGPED Trigger: GTCTTCTGGACCCATTACCAAAGCAGAGTTCTCGTC...ACATGCGTAGTGCTCAGAAATGTAGATAAATAGTGTTTTACGATATTGGTGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233627.2 |
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| 3UTR TCA 72 bp | AAGGGAAGAAGCCTGAGAAGAGATATACAGCCACCATaGAATGTCAGAGATGAACTCTTACTGGATTTTGGC | + |
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Preference number: 3 (lower is better) Translates to: KGRSLRRDIQPP*NVRDELLLDFG Trigger: GCCAAAATCCAGTAAGAGTTCATCTCTGACATTTCATGGTGGCTGTATATCTCTTCTCAGGCTTCTTCCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170988.2 |
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| 3UTR-3UTR CAA 90 bp | GTGTCTATGTTTCTGACAGTGAAATCTGGTGCACGGTCCTCAGATTTGAAATCCAAGGTTCTGAATCTCTaGAGTCCCAATGAAAGTCAA | + |
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Preference number: 3 (lower is better) Translates to: VSMFLTVKSGARSSDLKSKVLNL*SPNESQ Trigger: TTGACTTTCATTGGGACTCAAGAGATTCAGAACCTT...GGATTTCAAATCTGAGGACCGTGCACCAGATTTCACTGTCAGAAACATAGACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233627.2 |
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| 3UTR TCA 72 bp | ACTCCTCTAGAAGGTTCTGAATCTCTTGAGTCCCAATaGAAGTCAAGCTCTTTGTTTATATTCAATCCGGCA | + |
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Preference number: 3 (lower is better) Translates to: TPLEGSESLESQ*KSSSLFIFNPA Trigger: TGCCGGATTGAATATAAACAAAGAGCTTGACTTTCATTGGGACTCAAGAGATTCAGAACCTTCTAGAGGAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233627.2 |
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| 3UTR CAA 72 bp | TGCCAGGCTGGGCTGCAACACTACCCTGCTGTGGACTaGGGAGCTGCCTTCTCCAGTGCACCGAGCCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: CQAGLQHYPAVD*GAAFSSAPSLL Trigger: CAGCAGGCTCGGTGCACTGGAGAAGGCAGCTCCCAAGTCCACAGCAGGGTAGTGTTGCAGCCCAGCCTGGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170988.2 ENSMUST00000233165.2 |
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| CDS-3UTR CCA 90 bp | TGCATATCCCTTCCCACAGGAAACAGCTGTTACTGCAGAACCTGCCAGGCTGGGCAGGGAATCCAGCCTTaGATGCACGGGGGTCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: CISLPTGNSCYCRTCQAGQGIQP*MHGGPS Trigger: GCTTGGACCCCCGTGCATCCAAGGCTGGATTCCCTG...CCCAGCCTGGCAGGTTCTGCAGTAACAGCTGTTTCCTGTGGGAAGGGATATGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170988.2 |
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| CDS-3UTR GCA 90 bp | GGTAGTGCATATCCCTTCCCACAGGAAACAGCTGTTACTGCAGAACCTGCCAGGAATCCGGCATTTCCCTaGAGGCTGGGGGACACCCAC | + |
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Preference number: 4 (lower is better) Translates to: GSAYPFPQETAVTAEPARNPAFP*RLGDTH Trigger: GTGGGTGTCCCCCAGCCTGCAGGGAAATGCCGGATT...CCTGGCAGGTTCTGCAGTAACAGCTGTTTCCTGTGGGAAGGGATATGCACTACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170988.2 |
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| CDS-3UTR GCA 90 bp | AACCTGCCAGGCTGGGCTGCAACACTACCCTGCTGTGGACTTGGGAGCTGCCTTGCATACAGTCGCTCATaGAGTGCAGAGAAGACATTC | + |
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Preference number: 4 (lower is better) Translates to: NLPGWAATLPCCGLGSCLAYSRS*SAEKTF Trigger: GAATGTCTTCTCTGCACTGCATGAGCGACTGTATGC...AAGGCAGCTCCCAAGTCCACAGCAGGGTAGTGTTGCAGCCCAGCCTGGCAGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170988.2 |
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| CDS-3UTR CCA 90 bp | TGCTGGGAGGATAGTAGCTGGGCACGTAGCTTCACTCCTCTAGAAGGTTCTGAACAGGGAATCCAGCCTTaGATGCACGGGGGTCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: CWEDSSWARSFTPLEGSEQGIQP*MHGGPS Trigger: GCTTGGACCCCCGTGCATCCAAGGCTGGATTCCCTG...TTCAGAACCTTCTAGAGGAGTGAAGCTACGTGCCCAGCTACTATCCTCCCAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
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| CDS-3UTR CCA 90 bp | TGCACCGAGCCTGCTGAGGGAAGCTCTGAGCTGCCAGTTGAGCTCCAGAATCAACACCTTCCAGGACACTaGAACTTCCCGCCTCCAAAT | + |
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Preference number: 4 (lower is better) Translates to: CTEPAEGSSELPVELQNQHLPGH*NFPPPN Trigger: ATTTGGAGGCGGGAAGTTCCAGTGTCCTGGAAGGTG...TTGATTCTGGAGCTCAACTGGCAGCTCAGAGCTTCCCTCAGCAGGCTCGGTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170988.2 ENSMUST00000233165.2 |
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| CDS-3UTR CCA 90 bp | GTGCATATCCCTTCCCACAGGAAACAGCTGTTACTGCAGAACCTGCCAGGCTGGCACCTTCCAGGACACTaGAACTTCCCGCCTCCAAAT | + |
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Preference number: 4 (lower is better) Translates to: VHIPSHRKQLLLQNLPGWHLPGH*NFPPPN Trigger: ATTTGGAGGCGGGAAGTTCCAGTGTCCTGGAAGGTG...CCAGCCTGGCAGGTTCTGCAGTAACAGCTGTTTCCTGTGGGAAGGGATATGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170988.2 ENSMUST00000233165.2 |
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| 3UTR CAA 72 bp | GCACCGAGCCTGCTGAGGGAAGCTCTGAGCTGCCAGTaGAGCTCCAGAATCAATTCACTCATTGCGAAGAGT | + |
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Preference number: 4 (lower is better) Translates to: APSLLREALSCQ*SSRINSLIAKS Trigger: ACTCTTCGCAATGAGTGAATTGATTCTGGAGCTCAACTGGCAGCTCAGAGCTTCCCTCAGCAGGCTCGGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170988.2 ENSMUST00000233165.2 |
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| CDS-3UTR GCA 90 bp | AACCTGCCAGGCTGGGCTGCAACACTACCCTGCTGTGGACTTGGGAGCTGCCTTTGTCTTTACCTGCAGTaGCAAACACAGAAGATATGC | + |
|
Preference number: 4 (lower is better) Translates to: NLPGWAATLPCCGLGSCLCLYLQ*QTQKIC Trigger: GCATATCTTCTGTGTTTGGCACTGCAGGTAAAGACA...AAGGCAGCTCCCAAGTCCACAGCAGGGTAGTGTTGCAGCCCAGCCTGGCAGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170988.2 |
||
| CDS-3UTR TCA 90 bp | GGTAGTGCATATCCCTTCCCACAGGAAACAGCTGTTACTGCAGAACCTGCCAGGCCTTCCAGTTGCTCATaGAGTTCTTCAGTTAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: GSAYPFPQETAVTAEPARPSSCS*SSSVSG Trigger: GCCGCTAACTGAAGAACTTCATGAGCAACTGGAAGG...CCTGGCAGGTTCTGCAGTAACAGCTGTTTCCTGTGGGAAGGGATATGCACTACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170988.2 |
||
| CDS-3UTR GCA 90 bp | CTGTTACTGCAGAACCTGCCAGGCTGGGCTGCAACACTACCCTGCTGTGGACTTCCATTGTTCCATGAGTaGCTAAACCTTCCAGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLQNLPGWAATLPCCGLPLFHE*LNLPVA Trigger: AGCAACTGGAAGGTTTAGGCACTCATGGAACAATGG...AAGTCCACAGCAGGGTAGTGTTGCAGCCCAGCCTGGCAGGTTCTGCAGTAACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170988.2 |
||
| CDS-3UTR CCA 90 bp | CTTCCCCAGATCCACTGTTCATGTTTCATTTCCGAAAAGAGCAGGTCTCCCAGGAGCCATTCAGGCAGCTaGGAGCCATACTCAAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LPQIHCSCFISEKSRSPRSHSGS*EPYSKP Trigger: GGGCTTTGAGTATGGCTCCCAGCTGCCTGAATGGCT...CCTGGGAGACCTGCTCTTTTCGGAAATGAAACATGAACAGTGGATCTGGGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170988.2 ENSMUST00000233627.2 |
||
| CDS-3UTR TCA 90 bp | ACCGAGCCTGCTGAGGGAAGCTCTGAGCTGCCAGTTGAGCTCCAGAATCAATTCCGCCTCCAAATGCCATaGAGTAGTCCAAGAAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: TEPAEGSSELPVELQNQFRLQMP*SSPRKC Trigger: ACATTTTCTTGGACTACTTCATGGCATTTGGAGGCG...GAATTGATTCTGGAGCTCAACTGGCAGCTCAGAGCTTCCCTCAGCAGGCTCGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170988.2 ENSMUST00000233165.2 |
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| CDS-3UTR GCA 90 bp | ACCGAGCCTGCTGAGGGAAGCTCTGAGCTGCCAGTTGAGCTCCAGAATCAATTCGGTTCCAGAATGACCTaGAGATCCGTGAGCTTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: TEPAEGSSELPVELQNQFGSRMT*RSVSFY Trigger: ATAAAAGCTCACGGATCTGCAGGTCATTCTGGAACC...GAATTGATTCTGGAGCTCAACTGGCAGCTCAGAGCTTCCCTCAGCAGGCTCGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170988.2 |
||
| CDS-3UTR GCA 90 bp | TTCCCACAGGAAACAGCTGTTACTGCAGAACCTGCCAGGCTGGGCTGCAACACTATGGGTCCAGAAGACTaGATTCGTACTTATACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FPQETAVTAEPARLGCNTMGPED*IRTYTA Trigger: TGCTGTATAAGTACGAATGCAGTCTTCTGGACCCAT...AGTGTTGCAGCCCAGCCTGGCAGGTTCTGCAGTAACAGCTGTTTCCTGTGGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170988.2 ENSMUST00000233165.2 |
||
| CDS-3UTR GCA 90 bp | TGCATATCCCTTCCCACAGGAAACAGCTGTTACTGCAGAACCTGCCAGGCTGGGATGGGTCCAGAAGACTaGATTCGTACTTATACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CISLPTGNSCYCRTCQAGMGPED*IRTYTA Trigger: TGCTGTATAAGTACGAATGCAGTCTTCTGGACCCAT...CCCAGCCTGGCAGGTTCTGCAGTAACAGCTGTTTCCTGTGGGAAGGGATATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170988.2 ENSMUST00000233165.2 |
||
| CDS-3UTR CCA 90 bp | TTTATTCATCTCTTAAGACAATACATTCCCACCCCAGTTTCCGTTCCCCACCTTCAGGGAATCCAGCCTTaGATGCACGGGGGTCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FIHLLRQYIPTPVSVPHLQGIQP*MHGGPS Trigger: GCTTGGACCCCCGTGCATCCAAGGCTGGATTCCCTG...AAGGTGGGGAACGGAAACTGGGGTGGGAATGTATTGTCTTAAGAGATGAATAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
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| CDS-3UTR CCA 90 bp | GATAGTAGCTGGGCACGTAGCTTCACTCCTCTAGAAGGTTCTGAATCTCTTGAGCACCTTCCAGGACACTaGAACTTCCCGCCTCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: DSSWARSFTPLEGSESLEHLPGH*NFPPPN Trigger: ATTTGGAGGCGGGAAGTTCCAGTGTCCTGGAAGGTG...CTCAAGAGATTCAGAACCTTCTAGAGGAGTGAAGCTACGTGCCCAGCTACTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 |
||
| CDS-3UTR TCA 90 bp | TGCTGGGAGGATAGTAGCTGGGCACGTAGCTTCACTCCTCTAGAAGGTTCTGAACGCCTCCAAATGCCATaGAGTAGTCCAAGAAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: CWEDSSWARSFTPLEGSERLQMP*SSPRKC Trigger: ACATTTTCTTGGACTACTTCATGGCATTTGGAGGCG...TTCAGAACCTTCTAGAGGAGTGAAGCTACGTGCCCAGCTACTATCCTCCCAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 |
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| CDS-3UTR CCA 90 bp | ATGATGGTGCCGTTTTTCAGGAAAACCCTATGTTCCCATGGATCTGCTGTGTTTAGCCATTCAGGCAGCTaGGAGCCATACTCAAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: MMVPFFRKTLCSHGSAVFSHSGS*EPYSKP Trigger: GGGCTTTGAGTATGGCTCCCAGCTGCCTGAATGGCT...AAACACAGCAGATCCATGGGAACATAGGGTTTTCCTGAAAAACGGCACCATCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170988.2 |
||
| CDS-3UTR TCA 90 bp | TGCTGGGAGGATAGTAGCTGGGCACGTAGCTTCACTCCTCTAGAAGGTTCTGAACCATCTTTTGGATTTTaGCCAGTTTCTCAGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CWEDSSWARSFTPLEGSEPSFGF*PVSQKP Trigger: TGGCTTCTGAGAAACTGGTCAAAATCCAAAAGATGG...TTCAGAACCTTCTAGAGGAGTGAAGCTACGTGCCCAGCTACTATCCTCCCAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170988.2 ENSMUST00000233627.2 |
||
| CDS-3UTR GCA 90 bp | TGCTGGGAGGATAGTAGCTGGGCACGTAGCTTCACTCCTCTAGAAGGTTCTGAAATGGGTCCAGAAGACTaGATTCGTACTTATACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CWEDSSWARSFTPLEGSEMGPED*IRTYTA Trigger: TGCTGTATAAGTACGAATGCAGTCTTCTGGACCCAT...TTCAGAACCTTCTAGAGGAGTGAAGCTACGTGCCCAGCTACTATCCTCCCAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 |
||
| CDS-3UTR GCA 90 bp | CCCCACCAATATCGTAAAACACTATTTATCTACATTTCTGAGCACTACGCATGTAATCCGGCATTTCCCTaGAGGCTGGGGGACACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PHQYRKTLFIYISEHYACNPAFP*RLGDTH Trigger: GTGGGTGTCCCCCAGCCTGCAGGGAAATGCCGGATT...ACATGCGTAGTGCTCAGAAATGTAGATAAATAGTGTTTTACGATATTGGTGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 |
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| CDS-3UTR TCA 90 bp | CCTTCTTCCCCAGATCCACTGTTCATGTTTCATTTCCGAAAAGAGCAGGTCTCCCTGTGGATATCGGGATaGGACAGGATATATCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PSSPDPLFMFHFRKEQVSLWISG*DRIYPS Trigger: ACTTGGATATATCCTGTCTCATCCCGATATCCACAG...GGAGACCTGCTCTTTTCGGAAATGAAACATGAACAGTGGATCTGGGGAAGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
||
| CDS-3UTR TCA 90 bp | CAAAAACCAGACTCATGTGCAGTTATTTACCTGGCACAAAACCAGATGCGCATTGGGACACCCACCAAATaGCGAGAACTCTGCTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QKPDSCAVIYLAQNQMRIGTPTK*RELCFG Trigger: ACCAAAGCAGAGTTCTCGTCATTTGGTGGGTGTCCC...AATGCGCATCTGGTTTTGTGCCAGGTAAATAACTGCACATGAGTCTGGTTTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170988.2 |
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| CDS-3UTR GCA 90 bp | TGGGTAGTGCATATCCCTTCCCACAGGAAACAGCTGTTACTGCAGAACCTGCCAATTCTTTGGAATCCATaGTGTGTGATAGACAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: WVVHIPSHRKQLLLQNLPILWNP*CVIDRT Trigger: AGTCCTGTCTATCACACAGCATGGATTCCAAAGAAT...TGGCAGGTTCTGCAGTAACAGCTGTTTCCTGTGGGAAGGGATATGCACTACCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170988.2 |
||
| CDS-3UTR GCA 90 bp | TGCTGGGAGGATAGTAGCTGGGCACGTAGCTTCACTCCTCTAGAAGGTTCTGAAATTCTTTGGAATCCATaGTGTGTGATAGACAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: CWEDSSWARSFTPLEGSEILWNP*CVIDRT Trigger: AGTCCTGTCTATCACACAGCATGGATTCCAAAGAAT...TTCAGAACCTTCTAGAGGAGTGAAGCTACGTGCCCAGCTACTATCCTCCCAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
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| CDS-3UTR GCA 90 bp | CCTTCTTCCCCAGATCCACTGTTCATGTTTCATTTCCGAAAAGAGCAGGTCTCCGGTTCCAGAATGACCTaGAGATCCGTGAGCTTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: PSSPDPLFMFHFRKEQVSGSRMT*RSVSFY Trigger: ATAAAAGCTCACGGATCTGCAGGTCATTCTGGAACC...GGAGACCTGCTCTTTTCGGAAATGAAACATGAACAGTGGATCTGGGGAAGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
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| 3UTR CAA 72 bp | CGAAAGCACTGGTCAGTCTTCTGGAGACCTGTGTCCTaGTCAGTGAGGAAAAGGAGAGTCAACAATTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RKHWSVFWRPVS*SVRKRRVNNFQ Trigger: TTGGAAATTGTTGACTCTCCTTTTCCTCACTGACAAGGACACAGGTCTCCAGAAGACTGACCAGTGCTTTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170988.2 ENSMUST00000233165.2 |
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| CDS-3UTR TCA 90 bp | GAAAACCCTATGTTCCCATGGATCTGCTGTGTTTTCTCTCCAGAACGTAATGGCCTGTGGATATCGGGATaGGACAGGATATATCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ENPMFPWICCVFSPERNGLWISG*DRIYPS Trigger: ACTTGGATATATCCTGTCTCATCCCGATATCCACAG...GCCATTACGTTCTGGAGAGAAAACACAGCAGATCCATGGGAACATAGGGTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170988.2 |
||
| CDS-3UTR TCA 90 bp | TCATTTCCGAAAAGAGCAGGTCTCCCAGGGATACCACAAAGACATGGTATAACCCGCCTCCAAATGCCATaGAGTAGTCCAAGAAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: SFPKRAGLPGIPQRHGITRLQMP*SSPRKC Trigger: ACATTTTCTTGGACTACTTCATGGCATTTGGAGGCG...GGTTATACCATGTCTTTGTGGTATCCCTGGGAGACCTGCTCTTTTCGGAAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 |
||
| CDS-3UTR TCA 90 bp | CAGCCCCACCAATATCGTAAAACACTATTTATCTACATTTCTGAGCACTACGCAGGGACACCCACCAAATaGCGAGAACTCTGCTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QPHQYRKTLFIYISEHYAGTPTK*RELCFG Trigger: ACCAAAGCAGAGTTCTCGTCATTTGGTGGGTGTCCC...TGCGTAGTGCTCAGAAATGTAGATAAATAGTGTTTTACGATATTGGTGGGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 |
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| CDS-3UTR GCA 90 bp | TTTATTCATCTCTTAAGACAATACATTCCCACCCCAGTTTCCGTTCCCCACCTTGCATACAGTCGCTCATaGAGTGCAGAGAAGACATTC | + |
|
Preference number: 4 (lower is better) Translates to: FIHLLRQYIPTPVSVPHLAYSRS*SAEKTF Trigger: GAATGTCTTCTCTGCACTGCATGAGCGACTGTATGC...AAGGTGGGGAACGGAAACTGGGGTGGGAATGTATTGTCTTAAGAGATGAATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
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| CDS-3UTR GCA 90 bp | GTTCATGTTTCATTTCCGAAAAGAGCAGGTCTCCCAGGGATACCACAAAGACATCCATTGTTCCATGAGTaGCTAAACCTTCCAGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VHVSFPKRAGLPGIPQRHPLFHE*LNLPVA Trigger: AGCAACTGGAAGGTTTAGGCACTCATGGAACAATGG...ATGTCTTTGTGGTATCCCTGGGAGACCTGCTCTTTTCGGAAATGAAACATGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
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| CDS-3UTR GCA 90 bp | CCTTCTTCCCCAGATCCACTGTTCATGTTTCATTTCCGAAAAGAGCAGGTCTCCAATCTTGTCTTTACCTaGAGTGCCAAACACAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PSSPDPLFMFHFRKEQVSNLVFT*SAKHRR Trigger: TCTTCTGTGTTTGGCACTGCAGGTAAAGACAAGATT...GGAGACCTGCTCTTTTCGGAAATGAAACATGAACAGTGGATCTGGGGAAGAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
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| CDS-3UTR GCA 90 bp | GATAGTAGCTGGGCACGTAGCTTCACTCCTCTAGAAGGTTCTGAATCTCTTGAGAATCTTGTCTTTACCTaGAGTGCCAAACACAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: DSSWARSFTPLEGSESLENLVFT*SAKHRR Trigger: TCTTCTGTGTTTGGCACTGCAGGTAAAGACAAGATT...CTCAAGAGATTCAGAACCTTCTAGAGGAGTGAAGCTACGTGCCCAGCTACTATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
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| CDS-3UTR CCA 90 bp | CTTCCCCAGATCCACTGTTCATGTTTCATTTCCGAAAAGAGCAGGTCTCCCAGGAGAGAAGACATTCTTTaGAATCCATGCTGTGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: LPQIHCSCFISEKSRSPRREDIL*NPCCVI Trigger: TATCACACAGCATGGATTCCAAAGAATGTCTTCTCT...CCTGGGAGACCTGCTCTTTTCGGAAATGAAACATGAACAGTGGATCTGGGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
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| 3UTR CAA 72 bp | ATCTACATTTCTGAGCACTACGCATGTCTGCAGCGGTaGGCATCAATAAGCCTAAGATTTCCAAGGTCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: IYISEHYACLQR*ASISLRFPRSS Trigger: ACTAGACCTTGGAAATCTTAGGCTTATTGATGCCAACCGCTGCAGACATGCGTAGTGCTCAGAAATGTAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
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| CDS-3UTR TCA 90 bp | AGCCCCACCAATATCGTAAAACACTATTTATCTACATTTCTGAGCACTACGCATCCTTCCAGTTGCTCATaGAGTTCTTCAGTTAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SPTNIVKHYLSTFLSTTHPSSCS*SSSVSG Trigger: GCCGCTAACTGAAGAACTTCATGAGCAACTGGAAGG...ATGCGTAGTGCTCAGAAATGTAGATAAATAGTGTTTTACGATATTGGTGGGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
||
| CDS-3UTR TCA 90 bp | CAGCCCCACCAATATCGTAAAACACTATTTATCTACATTTCTGAGCACTACGCAAGGTCCATTGTTCCATaGGTGCCTAAACCTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QPHQYRKTLFIYISEHYARSIVP*VPKPSS Trigger: ACTGGAAGGTTTAGGCACTCATGGAACAATGGACCT...TGCGTAGTGCTCAGAAATGTAGATAAATAGTGTTTTACGATATTGGTGGGGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
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| CDS-3UTR TCA 90 bp | TTTATTCATCTCTTAAGACAATACATTCCCACCCCAGTTTCCGTTCCCCACCTTCTGTGGATATCGGGATaGGACAGGATATATCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FIHLLRQYIPTPVSVPHLLWISG*DRIYPS Trigger: ACTTGGATATATCCTGTCTCATCCCGATATCCACAG...AAGGTGGGGAACGGAAACTGGGGTGGGAATGTATTGTCTTAAGAGATGAATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
||
| CDS-3UTR GCA 90 bp | TCATGTTTCATTTCCGAAAAGAGCAGGTCTCCCAGGGATACCACAAAGACATGGATTCTTTGGAATCCATaGTGTGTGATAGACAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: SCFISEKSRSPRDTTKTWILWNP*CVIDRT Trigger: AGTCCTGTCTATCACACAGCATGGATTCCAAAGAAT...CCATGTCTTTGTGGTATCCCTGGGAGACCTGCTCTTTTCGGAAATGAAACATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
||
| CDS-3UTR GCA 90 bp | GAGGGAAGCTCTGAGCTGCCAGTTGAGCTCCAGAATCAATTCACTCATTGCGAACAAACACAGAAGATATaGTTTCTAAAACAGTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EGSSELPVELQNQFTHCEQTQKI*FLKQSC Trigger: ACAGGACTGTTTTAGAAAGCATATCTTCTGTGTTTG...TTCGCAATGAGTGAATTGATTCTGGAGCTCAACTGGCAGCTCAGAGCTTCCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170988.2 |
||
| CDS-3UTR TCA 90 bp | CCCACCAATATCGTAAAACACTATTTATCTACATTTCTGAGCACTACGCATGTCAGGTCCATTGTTCCATaGGTGCCTAAACCTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PTNIVKHYLSTFLSTTHVRSIVP*VPKPSS Trigger: ACTGGAAGGTTTAGGCACTCATGGAACAATGGACCT...GACATGCGTAGTGCTCAGAAATGTAGATAAATAGTGTTTTACGATATTGGTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
||
| CDS-3UTR TCA 90 bp | TTTATTCATCTCTTAAGACAATACATTCCCACCCCAGTTTCCGTTCCCCACCTTCCATCTTTTGGATTTTaGCCAGTTTCTCAGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FIHLLRQYIPTPVSVPHLPSFGF*PVSQKP Trigger: TGGCTTCTGAGAAACTGGTCAAAATCCAAAAGATGG...AAGGTGGGGAACGGAAACTGGGGTGGGAATGTATTGTCTTAAGAGATGAATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000170988.2 ENSMUST00000233627.2 |
||
| CDS-3UTR GCA 90 bp | CCCACCAATATCGTAAAACACTATTTATCTACATTTCTGAGCACTACGCATGTCTCCAAGTGTCCAGAATaGAATAGGAGGAGCATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PTNIVKHYLSTFLSTTHVSKCPE*NRRSIG Trigger: GCCAATGCTCCTCCTATTGCATTCTGGACACTTGGA...GACATGCGTAGTGCTCAGAAATGTAGATAAATAGTGTTTTACGATATTGGTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
||
| CDS-3UTR GCA 90 bp | GATAGTAGCTGGGCACGTAGCTTCACTCCTCTAGAAGGTTCTGAATCTCTTGAGCAAACACAGAAGATATaGTTTCTAAAACAGTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: DSSWARSFTPLEGSESLEQTQKI*FLKQSC Trigger: ACAGGACTGTTTTAGAAAGCATATCTTCTGTGTTTG...CTCAAGAGATTCAGAACCTTCTAGAGGAGTGAAGCTACGTGCCCAGCTACTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
||
| CDS-3UTR GCA 90 bp | TTTATTCATCTCTTAAGACAATACATTCCCACCCCAGTTTCCGTTCCCCACCTTTGTCTTTACCTGCAGTaGCAAACACAGAAGATATGC | + |
|
Preference number: 4 (lower is better) Translates to: FIHLLRQYIPTPVSVPHLCLYLQ*QTQKIC Trigger: GCATATCTTCTGTGTTTGGCACTGCAGGTAAAGACA...AAGGTGGGGAACGGAAACTGGGGTGGGAATGTATTGTCTTAAGAGATGAATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
||
| CDS-3UTR TCA 90 bp | AGGAAAACCCTATGTTCCCATGGATCTGCTGTGTTTTCTCTCCAGAACGTAATGAGGACTTTGTACTGCTaGTTCAAAATCTACATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RKTLCSHGSAVFSLQNVMRTLYC*FKIYMF Trigger: GAACATGTAGATTTTGAATCAGCAGTACAAAGTCCT...CATTACGTTCTGGAGAGAAAACACAGCAGATCCATGGGAACATAGGGTTTTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170988.2 |
||
| CDS-3UTR GCA 90 bp | CACCAATATCGTAAAACACTATTTATCTACATTTCTGAGCACTACGCATGTCTGTCCAAGTGTCCAGAATaGAATAGGAGGAGCATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HQYRKTLFIYISEHYACLSKCPE*NRRSIG Trigger: GCCAATGCTCCTCCTATTGCATTCTGGACACTTGGA...CAGACATGCGTAGTGCTCAGAAATGTAGATAAATAGTGTTTTACGATATTGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
||
| CDS-3UTR TCA 90 bp | TTTATTCATCTCTTAAGACAATACATTCCCACCCCAGTTTCCGTTCCCCACCTTAGGACTTTGTACTGCTaGTTCAAAATCTACATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FIHLLRQYIPTPVSVPHLRTLYC*FKIYMF Trigger: GAACATGTAGATTTTGAATCAGCAGTACAAAGTCCT...AAGGTGGGGAACGGAAACTGGGGTGGGAATGTATTGTCTTAAGAGATGAATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
||
| CDS-3UTR GCA 90 bp | CACCAATATCGTAAAACACTATTTATCTACATTTCTGAGCACTACGCATGTCTGGGTTCCAGAATGACCTaGAGATCCGTGAGCTTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: HQYRKTLFIYISEHYACLGSRMT*RSVSFY Trigger: ATAAAAGCTCACGGATCTGCAGGTCATTCTGGAACC...CAGACATGCGTAGTGCTCAGAAATGTAGATAAATAGTGTTTTACGATATTGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
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| CDS-3UTR GCA 90 bp | AAGGTTCTGAATCTCTTGAGTCCCAATGAAAGTCAAGCTCTTTGTTTATATTCATCCAAGTGTCCAGAATaGAATAGGAGGAGCATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KVLNLLSPNESQALCLYSSKCPE*NRRSIG Trigger: GCCAATGCTCCTCCTATTGCATTCTGGACACTTGGA...TGAATATAAACAAAGAGCTTGACTTTCATTGGGACTCAAGAGATTCAGAACCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233627.2 |
||
| CDS-3UTR GCA 90 bp | AAGGTTCTGAATCTCTTGAGTCCCAATGAAAGTCAAGCTCTTTGTTTATATTCACCATTGTTCCATGAGTaGCTAAACCTTCCAGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KVLNLLSPNESQALCLYSPLFHE*LNLPVA Trigger: AGCAACTGGAAGGTTTAGGCACTCATGGAACAATGG...TGAATATAAACAAAGAGCTTGACTTTCATTGGGACTCAAGAGATTCAGAACCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233627.2 |
||
| CDS-3UTR GCA 90 bp | CACCAATATCGTAAAACACTATTTATCTACATTTCTGAGCACTACGCATGTCTGTGTCTTTACCTGCAGTaGCAAACACAGAAGATATGC | + |
|
Preference number: 4 (lower is better) Translates to: HQYRKTLFIYISEHYACLCLYLQ*QTQKIC Trigger: GCATATCTTCTGTGTTTGGCACTGCAGGTAAAGACA...CAGACATGCGTAGTGCTCAGAAATGTAGATAAATAGTGTTTTACGATATTGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
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| CDS-3UTR GCA 90 bp | CCCCACCAATATCGTAAAACACTATTTATCTACATTTCTGAGCACTACGCATGTAATCTTGTCTTTACCTaGAGTGCCAAACACAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PHQYRKTLFIYISEHYACNLVFT*SAKHRR Trigger: TCTTCTGTGTTTGGCACTGCAGGTAAAGACAAGATT...ACATGCGTAGTGCTCAGAAATGTAGATAAATAGTGTTTTACGATATTGGTGGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
||
| CDS-3UTR TCA 90 bp | CCCACCAATATCGTAAAACACTATTTATCTACATTTCTGAGCACTACGCATGTCAGGACTTTGTACTGCTaGTTCAAAATCTACATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PTNIVKHYLSTFLSTTHVRTLYC*FKIYMF Trigger: GAACATGTAGATTTTGAATCAGCAGTACAAAGTCCT...GACATGCGTAGTGCTCAGAAATGTAGATAAATAGTGTTTTACGATATTGGTGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
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| CDS-3UTR CCA 90 bp | CCCACCAATATCGTAAAACACTATTTATCTACATTTCTGAGCACTACGCATGTCAGAGAAGACATTCTTTaGAATCCATGCTGTGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: PTNIVKHYLSTFLSTTHVREDIL*NPCCVI Trigger: TATCACACAGCATGGATTCCAAAGAATGTCTTCTCT...GACATGCGTAGTGCTCAGAAATGTAGATAAATAGTGTTTTACGATATTGGTGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
||
| CDS-3UTR GCA 90 bp | CCCACCAATATCGTAAAACACTATTTATCTACATTTCTGAGCACTACGCATGTCCAAACACAGAAGATATaGTTTCTAAAACAGTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PTNIVKHYLSTFLSTTHVQTQKI*FLKQSC Trigger: ACAGGACTGTTTTAGAAAGCATATCTTCTGTGTTTG...GACATGCGTAGTGCTCAGAAATGTAGATAAATAGTGTTTTACGATATTGGTGGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
||
| 3UTR CAA 72 bp | AAATGTTATCTTTGTCAAACTACGAGCAAAGATCATTaGATTCAAAAGAGTGCTTCCCCCTTAGCTAACATA | + |
|
Preference number: 4 (lower is better) Translates to: KCYLCQTTSKDH*IQKSASPLANI Trigger: TATGTTAGCTAAGGGGGAAGCACTCTTTTGAATCAAATGATCTTTGCTCGTAGTTTGACAAAGATAACATTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
||
| CDS-3UTR CAA 90 bp | CTTCCCACAGGAAACAGCTGTTACTGCAGAACCTGCCAGGCTGGGCTGCAACACCCAGGGAATCCAGCCTaGGATGCACGGGGGTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LPTGNSCYCRTCQAGLQHPGNPA*DARGSK Trigger: CTTGGACCCCCGTGCATCCAAGGCTGGATTCCCTGG...GTGTTGCAGCCCAGCCTGGCAGGTTCTGCAGTAACAGCTGTTTCCTGTGGGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170988.2 |
||
| CDS-3UTR CAA 90 bp | GTGGACTTGGGAGCTGCCTTCTCCAGTGCACCGAGCCTGCTGAGGGAAGCTCTGTTCCAGCGTTCAGGTTaGAATGACTCAGGTTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VDLGAAFSSAPSLLREALFQRSG*NDSGSG Trigger: TCCTGAACCTGAGTCATTCAAACCTGAACGCTGGAA...CAGAGCTTCCCTCAGCAGGCTCGGTGCACTGGAGAAGGCAGCTCCCAAGTCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170988.2 |
||
| CDS-3UTR CAA 90 bp | GATAGTAGCTGGGCACGTAGCTTCACTCCTCTAGAAGGTTCTGAATCTCTTGAGCCAGGGAATCCAGCCTaGGATGCACGGGGGTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: DSSWARSFTPLEGSESLEPGNPA*DARGSK Trigger: CTTGGACCCCCGTGCATCCAAGGCTGGATTCCCTGG...CTCAAGAGATTCAGAACCTTCTAGAGGAGTGAAGCTACGTGCCCAGCTACTATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
||
| CDS-3UTR CAA 90 bp | TGCTGGGAGGATAGTAGCTGGGCACGTAGCTTCACTCCTCTAGAAGGTTCTGAAGCAATAGGAGGAGCATaGGCCAGAGCAGCCCAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: CWEDSSWARSFTPLEGSEAIGGA*ARAAQS Trigger: ACTTTGGGCTGCTCTGGCCAATGCTCCTCCTATTGC...TTCAGAACCTTCTAGAGGAGTGAAGCTACGTGCCCAGCTACTATCCTCCCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
||
| CDS-3UTR CAA 90 bp | GTTCATGTTTCATTTCCGAAAAGAGCAGGTCTCCCAGGGATACCACAAAGACATCCAGGGAATCCAGCCTaGGATGCACGGGGGTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VHVSFPKRAGLPGIPQRHPGNPA*DARGSK Trigger: CTTGGACCCCCGTGCATCCAAGGCTGGATTCCCTGG...ATGTCTTTGTGGTATCCCTGGGAGACCTGCTCTTTTCGGAAATGAAACATGAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
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| CDS-3UTR CAA 90 bp | AATCCGGCATTTCCCTGCAGGCTGGGGGACACCCACCAAATGACGAGAACTCTGAGTCATTCAGGTCCATaGTTCCATGAGTGCCTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: NPAFPCRLGDTHQMTRTLSHSGP*FHECLN Trigger: GTTTAGGCACTCATGGAACAATGGACCTGAATGACT...CAGAGTTCTCGTCATTTGGTGGGTGTCCCCCAGCCTGCAGGGAAATGCCGGATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233627.2 |
||
| CDS-3UTR CAA 90 bp | CACTGGTCAGTCTTCTGGAGACCTGTGTCCTTGTCAGTGAGGAAAAGGAGAGTCGGGAAGAAGCCTGCTTaGGTAATGGGTCCAGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: HWSVFWRPVSLSVRKRRVGKKPA*VMGPED Trigger: GTCTTCTGGACCCATTACCAAAGCAGGCTTCTTCCC...GACTCTCCTTTTCCTCACTGACAAGGACACAGGTCTCCAGAAGACTGACCAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233165.2 |
||
| CDS CCA 90 bp | GCTTTCCCAAACTCAAGTCCAGCTCCAATCCAGGGAATCCAGCCTTaGATGCACGGGGGTCCAAGCAAATTCTTCAACCGAGAGAATAAG | + |
|
Preference number: 5 (lower is better) Translates to: AFPNSSPAPIQGIQP*MHGGPSKFFNRENK Trigger: CTTATTCTCTCGGTTGAAGAATTTGCTTGGACCCCCGTGCATCCAAGGCTGGATTCCCTGGATTGGAGCTGGACTTGAGTTTGGGAAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
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| CDS-3UTR CAA 90 bp | CCTTCTTCCCCAGATCCACTGTTCATGTTTCATTTCCGAAAAGAGCAGGTCTCCGCAATAGGAGGAGCATaGGCCAGAGCAGCCCAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: PSSPDPLFMFHFRKEQVSAIGGA*ARAAQS Trigger: ACTTTGGGCTGCTCTGGCCAATGCTCCTCCTATTGC...GGAGACCTGCTCTTTTCGGAAATGAAACATGAACAGTGGATCTGGGGAAGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
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| CDS GCA 90 bp | TCCCAAACTCAAGTCCAGCTCCAATCCAGGGAATCCAGCCTTGGATaGACGGGGGTCCAAGCAAATTCTTCAACCGAGAGAATAAGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SQTQVQLQSRESSLG*TGVQANSSTERIRK Trigger: TTTTCTTATTCTCTCGGTTGAAGAATTTGCTTGGACCCCCGTGCATCCAAGGCTGGATTCCCTGGATTGGAGCTGGACTTGAGTTTGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
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| CDS CCA 90 bp | CATCAGCAGATCACCAGAAGGAACTGTGTGATTCAGAATTTTAACTaGCTTCACTACCTTTCTAGTAATGACACCAGGGGCTCTCAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: HQQITRRNCVIQNFN*LHYLSSNDTRGSQA Trigger: CGCTTGAGAGCCCCTGGTGTCATTACTAGAAAGGTAGTGAAGCCAGTTAAAATTCTGAATCACACAGTTCCTTCTGGTGATCTGCTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
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| CDS-3UTR CAA 90 bp | TTTCCGAAAAGAGCAGGTCTCCCAGGGATACCACAAAGACATGGTATAACCAGAAGTCATTCAGGTCCATaGTTCCATGAGTGCCTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: FPKRAGLPGIPQRHGITRSHSGP*FHECLN Trigger: GTTTAGGCACTCATGGAACAATGGACCTGAATGACT...TCTGGTTATACCATGTCTTTGTGGTATCCCTGGGAGACCTGCTCTTTTCGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
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| CDS-3UTR CAA 90 bp | GTGTCTATGTTTCTGACAGTGAAATCTGGTGCACGGTCCTCAGATTTGAAATCCTTCCAGCGTTCAGGTTaGAATGACTCAGGTTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VSMFLTVKSGARSSDLKSFQRSG*NDSGSG Trigger: TCCTGAACCTGAGTCATTCAAACCTGAACGCTGGAA...GGATTTCAAATCTGAGGACCGTGCACCAGATTTCACTGTCAGAAACATAGACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 |
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| CDS-3UTR CAA 90 bp | GGTGTCTATGTTTCTGACAGTGAAATCTGGTGCACGGTCCTCAGATTTGAAATCGAGCAAACCACAGGTTaGAATGACTCAGGTTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GVYVSDSEIWCTVLRFEIEQTTG*NDSGSG Trigger: TCCTGAACCTGAGTCATTCAAACCTGTGGTTTGCTC...GATTTCAAATCTGAGGACCGTGCACCAGATTTCACTGTCAGAAACATAGACACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233627.2 |
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| CDS-3UTR CAA 90 bp | TGCTGGGAGGATAGTAGCTGGGCACGTAGCTTCACTCCTCTAGAAGGTTCTGAAGCCATCTTTTGGATTTaGACCAGTTTCTTACAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: CWEDSSWARSFTPLEGSEAIFWI*TSFLQS Trigger: ACTTTGTAAGAAACTGGTCAAAATCCAAAAGATGGC...TTCAGAACCTTCTAGAGGAGTGAAGCTACGTGCCCAGCTACTATCCTCCCAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233437.2 |
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| CDS TCA 90 bp | CAAACCACCTTCCAGGACACTGGAACTTCCCGCCTCCAAATGCCATaGAGTAGTCCAAGAAAATGTACTTATCTAAATTTGCCTCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: QTTFQDTGTSRLQMP*SSPRKCTYLNLPLS Trigger: GGAAAGAGGCAAATTTAGATAAGTACATTTTCTTGGACTACTTCATGGCATTTGGAGGCGGGAAGTTCCAGTGTCCTGGAAGGTGGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 |
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| CDS GCA 90 bp | TTGACCAGTTTCTTACAAAGTCATTCAGGTCCATTGTTCCATGAGTaGCTAAACCTTCCAGTTGCTCATGAAGTTCTTCAGTTAGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LTSFLQSHSGPLFHE*LNLPVAHEVLQLAA Trigger: GGCCGCTAACTGAAGAACTTCATGAGCAACTGGAAGGTTTAGGCACTCATGGAACAATGGACCTGAATGACTTTGTAAGAAACTGGTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233437.2 |
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| CDS-3UTR CAA 90 bp | TTTCCGAAAAGAGCAGGTCTCCCAGGGATACCACAAAGACATGGTATAACCAGACAGAGAAGACATTCTTaGGAATCCATGCTGTGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: FPKRAGLPGIPQRHGITRQRRHS*ESMLCD Trigger: ATCACACAGCATGGATTCCAAAGAATGTCTTCTCTG...TCTGGTTATACCATGTCTTTGTGGTATCCCTGGGAGACCTGCTCTTTTCGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
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| CDS-3UTR CAA 90 bp | CAGCCCCACCAATATCGTAAAACACTATTTATCTACATTTCTGAGCACTACGCAGACGAGAACTCTGCTTaGGTAATGGGTCCAGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: QPHQYRKTLFIYISEHYADENSA*VMGPED Trigger: GTCTTCTGGACCCATTACCAAAGCAGAGTTCTCGTC...TGCGTAGTGCTCAGAAATGTAGATAAATAGTGTTTTACGATATTGGTGGGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 |
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| CDS GCA 90 bp | AAAGTAGATACCTTACAAAGTCATTCAGGTCCATTGTTCCATGAGTaGCTAAACCTTCCAGTTGCTCATGAAGTTCTTCAGTTAGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: KVDTLQSHSGPLFHE*LNLPVAHEVLQLAA Trigger: GGCCGCTAACTGAAGAACTTCATGAGCAACTGGAAGGTTTAGGCACTCATGGAACAATGGACCTGAATGACTTTGTAAGGTATCTACTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170988.2 ENSMUST00000233627.2 |
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| CDS-3UTR CAA 90 bp | ATGATGGTGCCGTTTTTCAGGAAAACCCTATGTTCCCATGGATCTGCTGTGTTTCAGAGAAGACATTCTTaGGAATCCATGCTGTGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: MMVPFFRKTLCSHGSAVFQRRHS*ESMLCD Trigger: ATCACACAGCATGGATTCCAAAGAATGTCTTCTCTG...AAACACAGCAGATCCATGGGAACATAGGGTTTTCCTGAAAAACGGCACCATCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170988.2 |
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| CDS-3UTR CAA 90 bp | AGCCCCACCAATATCGTAAAACACTATTTATCTACATTTCTGAGCACTACGCATGACGAGAACTCTGCTTaGGTAATGGGTCCAGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SPTNIVKHYLSTFLSTTHDENSA*VMGPED Trigger: GTCTTCTGGACCCATTACCAAAGCAGAGTTCTCGTC...ATGCGTAGTGCTCAGAAATGTAGATAAATAGTGTTTTACGATATTGGTGGGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 |
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| CDS TCA 90 bp | AACACAGAAGATATGCTTTCTAAAACAGTCCTGTGGATATCGGGATaGGACAGGATATATCCAAGTGTCCAGAATGCAATAGGAGGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: NTEDMLSKTVLWISG*DRIYPSVQNAIGGA Trigger: TGCTCCTCCTATTGCATTCTGGACACTTGGATATATCCTGTCTCATCCCGATATCCACAGGACTGTTTTAGAAAGCATATCTTCTGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
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| CDS TCA 90 bp | AGAAGACTGCATTCGTACTTATACAGCACTAAGATAATGCATAGTTaGATCTCTAAGAGAGCAAACCACCTTCCAGGACACTGGAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: RRLHSYLYSTKIMHS*ISKRANHLPGHWNF Trigger: GAAGTTCCAGTGTCCTGGAAGGTGGTTTGCTCTCTTAGAGATTCAACTATGCATTATCTTAGTGCTGTATAAGTACGAATGCAGTCTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233165.2 ENSMUST00000233437.2 |
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| CDS-3UTR CAA 90 bp | CAGACTCATGTGCAGTTATTTACCTGGCACAAAACCAGATGCGCATTTATTTTAAGTCATTCAGGTCCATaGTTCCATGAGTGCCTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: QTHVQLFTWHKTRCAFILSHSGP*FHECLN Trigger: GTTTAGGCACTCATGGAACAATGGACCTGAATGACT...TAAAATAAATGCGCATCTGGTTTTGTGCCAGGTAAATAACTGCACATGAGTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170988.2 |
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| CDS-3UTR CAA 90 bp | GGTGTCTATGTTTCTGACAGTGAAATCTGGTGCACGGTCCTCAGATTTGAAATCGTTCAGGAAAATATTTaGGATTTCTGTGTAGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GVYVSDSEIWCTVLRFEIVQENI*DFCVAR Trigger: TCTGGCTACACAGAAATCCAAAATATTTTCCTGAAC...GATTTCAAATCTGAGGACCGTGCACCAGATTTCACTGTCAGAAACATAGACACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
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| CDS-3UTR CAA 90 bp | CCCCACCAATATCGTAAAACACTATTTATCTACATTTCTGAGCACTACGCATGTGTTCAGGAAAATATTTaGGATTTCTGTGTAGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PHQYRKTLFIYISEHYACVQENI*DFCVAR Trigger: TCTGGCTACACAGAAATCCAAAATATTTTCCTGAAC...ACATGCGTAGTGCTCAGAAATGTAGATAAATAGTGTTTTACGATATTGGTGGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
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| CDS GCA 72 bp | CAGGAGCCGGAGCCAGGACAGGTAAGGGAAGAAGCCTaGTTTGGTAATGGGTCCAGAAGACTGCATTCGTAC | + |
|
Preference number: 6 (lower is better) Translates to: QEPEPGQVREEA*FGNGSRRLHSY Trigger: GTACGAATGCAGTCTTCTGGACCCATTACCAAAGCAGGCTTCTTCCCTTACCTGTCCTGGCTCCGGCTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233165.2 |
||
| CDS GCA 72 bp | CAAGTCCAGCTCCAATCCAGGGAATCCAGCCTTGGATaGACGGGGGTCCAAGCAAATTCTTCAACCGAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: QVQLQSRESSLG*TGVQANSSTER Trigger: TCTCTCGGTTGAAGAATTTGCTTGGACCCCCGTGCATCCAAGGCTGGATTCCCTGGATTGGAGCTGGACTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
||
| CDS CCA 72 bp | AACTCAAGTCCAGCTCCAATCCAGGGAATCCAGCCTTaGATGCACGGGGGTCCAAGCAAATTCTTCAACCGA | + |
|
Preference number: 6 (lower is better) Translates to: NSSPAPIQGIQP*MHGGPSKFFNR Trigger: TCGGTTGAAGAATTTGCTTGGACCCCCGTGCATCCAAGGCTGGATTCCCTGGATTGGAGCTGGACTTGAGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
||
| CDS CAA 72 bp | AAACTCAAGTCCAGCTCCAATCCAGGGAATCCAGCCTaGGATGCACGGGGGTCCAAGCAAATTCTTCAACCG | + |
|
Preference number: 6 (lower is better) Translates to: KLKSSSNPGNPA*DARGSKQILQP Trigger: CGGTTGAAGAATTTGCTTGGACCCCCGTGCATCCAAGGCTGGATTCCCTGGATTGGAGCTGGACTTGAGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
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| CDS GCA 72 bp | ATCGGGATGAGACAGGATATATCCAAGTGTCCAGAATaGAATAGGAGGAGCATTGGCCAGAGCAGCCCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: IGMRQDISKCPE*NRRSIGQSSPK Trigger: CTTTGGGCTGCTCTGGCCAATGCTCCTCCTATTGCATTCTGGACACTTGGATATATCCTGTCTCATCCCGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
||
| CDS GCA 72 bp | CCCATCTTCCCTTTCATCAAGGCATACAGTCGCTCATaGAGTGCAGAGAAGACATTCTTTGGAATCCATGCT | + |
|
Preference number: 6 (lower is better) Translates to: PIFPFIKAYSRS*SAEKTFFGIHA Trigger: AGCATGGATTCCAAAGAATGTCTTCTCTGCACTGCATGAGCGACTGTATGCCTTGATGAAAGGGAAGATGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
||
| CDS CAA 72 bp | CATACAGTCGCTCATGCAGTGCAGAGAAGACATTCTTaGGAATCCATGCTGTGTGATAGACAGGACTTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: HTVAHAVQRRHS*ESMLCDRQDFV Trigger: TACAAAGTCCTGTCTATCACACAGCATGGATTCCAAAGAATGTCTTCTCTGCACTGCATGAGCGACTGTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
||
| CDS CAA 72 bp | CCAATATTTTTCTCAAACAGCGCCAGGAGCCATCTTTaGGATTTTGACCAGTTTCTCAGAAGCCATTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: PIFFSNSARSHL*DFDQFLRSHSG Trigger: GCCTGAATGGCTTCTGAGAAACTGGTCAAAATCCAAAAGATGGCTCCTGGCGCTGTTTGAGAAAAATATTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170988.2 ENSMUST00000233627.2 |
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| CDS GCA 72 bp | ACCTTACAAAGTCATTCAGGTCCATTGTTCCATGAGTaGCTAAACCTTCCAGTTGCTCATGAAGTTCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: TLQSHSGPLFHE*LNLPVAHEVLQ Trigger: CTGAAGAACTTCATGAGCAACTGGAAGGTTTAGGCACTCATGGAACAATGGACCTGAATGACTTTGTAAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170988.2 ENSMUST00000233627.2 |
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| CDS GCA 72 bp | TTCCAATATGGCCTGCAAGAGGGTTCCAGAATGACCTaGAGATCCGTGAGCTTTTATGTTGCCAATATTTTT | + |
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Preference number: 6 (lower is better) Translates to: FQYGLQEGSRMT*RSVSFYVANIF Trigger: AAAAATATTGGCAACATAAAAGCTCACGGATCTGCAGGTCATTCTGGAACCCTCTTGCAGGCCATATTGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
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| CDS GCA 72 bp | TTCTTACAAAGTCATTCAGGTCCATTGTTCCATGAGTaGCTAAACCTTCCAGTTGCTCATGAAGTTCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: FLQSHSGPLFHE*LNLPVAHEVLQ Trigger: CTGAAGAACTTCATGAGCAACTGGAAGGTTTAGGCACTCATGGAACAATGGACCTGAATGACTTTGTAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233437.2 |
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| CDS CAA 72 bp | TTTTCTCAAACAGCGCCAGGAGCCATCTTTTGGATTTaGACCAGTTTCTTACAAAGTCATTCAGGTCCATTG | + |
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Preference number: 6 (lower is better) Translates to: FSQTAPGAIFWI*TSFLQSHSGPL Trigger: CAATGGACCTGAATGACTTTGTAAGAAACTGGTCAAAATCCAAAAGATGGCTCCTGGCGCTGTTTGAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233437.2 |
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| CDS TCA 72 bp | GATATGCTTTCTAAAACAGTCCTGTGGATATCGGGATaGGACAGGATATATCCAAGTGTCCAGAATGCAATA | + |
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Preference number: 6 (lower is better) Translates to: DMLSKTVLWISG*DRIYPSVQNAI Trigger: TATTGCATTCTGGACACTTGGATATATCCTGTCTCATCCCGATATCCACAGGACTGTTTTAGAAAGCATATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170988.2 ENSMUST00000233437.2 ENSMUST00000233627.2 |
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| CDS CAA 72 bp | ATTTTGACCAGTTTCTTACAAAGTCATTCAGGTCCATaGTTCCATGAGTGCCTAAACCTTCCAGTTGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: ILTSFLQSHSGP*FHECLNLPVAH Trigger: ATGAGCAACTGGAAGGTTTAGGCACTCATGGAACAATGGACCTGAATGACTTTGTAAGAAACTGGTCAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233437.2 |
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| CDS CAA 90 bp | ATCTTTTGGATTTTGACCAGTTTCTTACAAAGTCATTCAGGTCCATaGTTCCATGAGTGCCTAAACCTTCCAGTTGCTCATGAAGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: IFWILTSFLQSHSGP*FHECLNLPVAHEVL Trigger: AAGAACTTCATGAGCAACTGGAAGGTTTAGGCACTCATGGAACAATGGACCTGAATGACTTTGTAAGAAACTGGTCAAAATCCAAAAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233437.2 |
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| CDS CAA 90 bp | TTTATGTTGCCAATATTTTTCTCAAACAGCGCCAGGAGCCATCTTTaGGATTTTGACCAGTTTCTTACAAAGTCATTCAGGTCCATTGTT | + |
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Preference number: 6 (lower is better) Translates to: FMLPIFFSNSARSHL*DFDQFLTKSFRSIV Trigger: AACAATGGACCTGAATGACTTTGTAAGAAACTGGTCAAAATCCAAAAGATGGCTCCTGGCGCTGTTTGAGAAAAATATTGGCAACATAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233437.2 |
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