Pregenerated sensors for CYP2W1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029541Ensembl transcript IDs: ENSMUST00000031521.13, ENSMUST00000197955.2
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GAGAGCTCCATCAGTGCCCGGTCTTGTTGGGTCACACCCAGCAAATaGAGGTTCCCCAGGAACGGCAGAGGGCGAGGCCCAGGGGGCCAC | + |
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Preference number: 5 (lower is better) Translates to: ESSISARSCWVTPSK*RFPRNGRGRGPGGH Trigger: GTGGCCCCCTGGGCCTCGCCCTCTGCCGTTCCTGGGGAACCTGCATTTGCTGGGTGTGACCCAACAAGACCGGGCACTGATGGAGCTCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031521.13 |
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| CDS GCA 90 bp | GCGTTTCCAGCAGGGTTCTCAGGATGGTGCGCACCTCCTCGATCTTaGTCAAGACCGGCCTGTGCAACCGCAGGAAGGCCCCCAGCCGGG | + |
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Preference number: 5 (lower is better) Translates to: AFPAGFSGWCAPPRS*SRPACATAGRPPAG Trigger: CCCGGCTGGGGGCCTTCCTGCGGTTGCACAGGCCGGTCTTGAGCAAGATCGAGGAGGTGCGCACCATCCTGAGAACCCTGCTGGAAACGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031521.13 ENSMUST00000197955.2 |
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| CDS GCA 90 bp | TGCAGCACCTTGCCCACCATGGATGGCTGTTGCACACCCAGGCTCTaGAGTGTGCGCACCGTGAATTGGCGACCCGCCCTCCAGCGAGCT | + |
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Preference number: 5 (lower is better) Translates to: CSTLPTMDGCCTPRL*SVRTVNWRPALQRA Trigger: AGCTCGCTGGAGGGCGGGTCGCCAATTCACGGTGCGCACACTGCAGAGCCTGGGTGTGCAACAGCCATCCATGGTGGGCAAGGTGCTGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031521.13 |
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| CDS GCA 90 bp | AGCACTCGGTCCAGTTCCTCCTGCACGCGACCCTGCACATGTGGGTaGTTAACCATCAGGAAGACGGCCCACTGCAGCGTGGCCGCCGTG | + |
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Preference number: 5 (lower is better) Translates to: STRSSSSCTRPCTCG*LTIRKTAHCSVAAV Trigger: CACGGCGGCCACGCTGCAGTGGGCCGTCTTCCTGATGGTTAAGCACCCACATGTGCAGGGTCGCGTGCAGGAGGAACTGGACCGAGTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031521.13 ENSMUST00000197955.2 |
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| CDS GCA 90 bp | AGACAGGCCAGCTCCTGCAGCACCTTGCCCACCATGGATGGCTGTTaGACACCCAGGCTCTGCAGTGTGCGCACCGTGAATTGGCGACCC | + |
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Preference number: 5 (lower is better) Translates to: RQASSCSTLPTMDGC*TPRLCSVRTVNWRP Trigger: GGGTCGCCAATTCACGGTGCGCACACTGCAGAGCCTGGGTGTGCAACAGCCATCCATGGTGGGCAAGGTGCTGCAGGAGCTGGCCTGTCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031521.13 |
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| CDS GCA 90 bp | GTCAAAGCGCTGGCCGAAGAGAAGTGTGAAGGTGATGTTGCAGGGTaGCCAACCCAGCAGCGCCAGGGGGAGGGGCTGGCCTCCATAGCT | + |
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Preference number: 5 (lower is better) Translates to: VKALAEEKCEGDVAG*PTQQRQGEGLASIA Trigger: AGCTATGGAGGCCAGCCCCTCCCCCTGGCGCTGCTGGGTTGGGCACCCTGCAACATCACCTTCACACTTCTCTTCGGCCAGCGCTTTGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031521.13 |
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| CDS GCA 90 bp | CTCAGGATGGTGCGCACCTCCTCGATCTTGCTCAAGACCGGCCTGTaGAACCGCAGGAAGGCCCCCAGCCGGGGGAACGTGTTGAATAGC | + |
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Preference number: 5 (lower is better) Translates to: LRMVRTSSILLKTGL*NRRKAPSRGNVLNS Trigger: GCTATTCAACACGTTCCCCCGGCTGGGGGCCTTCCTGCGGTTGCACAGGCCGGTCTTGAGCAAGATCGAGGAGGTGCGCACCATCCTGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031521.13 ENSMUST00000197955.2 |
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| CDS CCA 90 bp | CCGTTGGCAAGGGTGGTCTCCGCGTTTCCAGCAGGGTTCTCAGGATaGTGCGCACCTCCTCGATCTTGCTCAAGACCGGCCTGTGCAACC | + |
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Preference number: 5 (lower is better) Translates to: PLARVVSAFPAGFSG*CAPPRSCSRPACAT Trigger: GGTTGCACAGGCCGGTCTTGAGCAAGATCGAGGAGGTGCGCACCATCCTGAGAACCCTGCTGGAAACGCGGAGACCACCCTTGCCAACGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031521.13 ENSMUST00000197955.2 |
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| CDS CCA 90 bp | CTCATGCAACACAGCACTGGTGTAGGGCAGTGCTCGCTGGTGCTCTaGTTGAGGCAGCTGCCCAGGACCCAGCACTCGGTCCAGTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: LMQHSTGVGQCSLVL*LRQLPRTQHSVQFL Trigger: GAGGAACTGGACCGAGTGCTGGGTCCTGGGCAGCTGCCTCAACCAGAGCACCAGCGAGCACTGCCCTACACCAGTGCTGTGTTGCATGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031521.13 ENSMUST00000197955.2 |
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| CDS GCA 90 bp | TTGGCAAGGGTGGTCTCCGCGTTTCCAGCAGGGTTCTCAGGATGGTaGGCACCTCCTCGATCTTGCTCAAGACCGGCCTGTGCAACCGCA | + |
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Preference number: 5 (lower is better) Translates to: LARVVSAFPAGFSGW*APPRSCSRPACATA Trigger: TGCGGTTGCACAGGCCGGTCTTGAGCAAGATCGAGGAGGTGCGCACCATCCTGAGAACCCTGCTGGAAACGCGGAGACCACCCTTGCCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031521.13 ENSMUST00000197955.2 |
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| CDS CCA 90 bp | GATGGCTGTTGCACACCCAGGCTCTGCAGTGTGCGCACCGTGAATTaGCGACCCGCCCTCCAGCGAGCTCCAGAAGAAAAGAAAATGCCC | + |
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Preference number: 5 (lower is better) Translates to: DGCCTPRLCSVRTVN*RPALQRAPEEKKMP Trigger: GGGCATTTTCTTTTCTTCTGGAGCTCGCTGGAGGGCGGGTCGCCAATTCACGGTGCGCACACTGCAGAGCCTGGGTGTGCAACAGCCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031521.13 |
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| CDS TCA 90 bp | CCATGGATGGCTGTTGCACACCCAGGCTCTGCAGTGTGCGCACCGTaGATTGGCGACCCGCCCTCCAGCGAGCTCCAGAAGAAAAGAAAA | + |
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Preference number: 5 (lower is better) Translates to: PWMAVAHPGSAVCAP*IGDPPSSELQKKRK Trigger: TTTTCTTTTCTTCTGGAGCTCGCTGGAGGGCGGGTCGCCAATTCACGGTGCGCACACTGCAGAGCCTGGGTGTGCAACAGCCATCCATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031521.13 |
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| CDS TCA 90 bp | ACTGGCTTGGGGTCTCCCACTGCGTCTTGTCCAGGAGGACTGAAGTaGGCAAAGGAATCACAGGAGTGCCCTTGGGGAGCAGGTAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: TGLGSPTASCPGGLK*AKESQECPWGAGSH Trigger: GTGGCTACCTGCTCCCCAAGGGCACTCCTGTGATTCCTTTGCTCACTTCAGTCCTCCTGGACAAGACGCAGTGGGAGACCCCAAGCCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031521.13 |
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| CDS CCA 90 bp | TCCTTTAAGACAGGCCAGCTCCTGCAGCACCTTGCCCACCATGGATaGCTGTTGCACACCCAGGCTCTGCAGTGTGCGCACCGTGAATTG | + |
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Preference number: 5 (lower is better) Translates to: SFKTGQLLQHLAHHG*LLHTQALQCAHREL Trigger: CAATTCACGGTGCGCACACTGCAGAGCCTGGGTGTGCAACAGCCATCCATGGTGGGCAAGGTGCTGCAGGAGCTGGCCTGTCTTAAAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031521.13 |
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| CDS TCA 90 bp | CATAGCCCGACAGCACCACGGTCTTCTGAGATCCCAGATGGATTGTaGACATGGGCCCGTAGCGTTCTGAGAGCTCCATCAGTGCCCGGT | + |
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Preference number: 5 (lower is better) Translates to: HSPTAPRSSEIPDGL*TWARSVLRAPSVPG Trigger: ACCGGGCACTGATGGAGCTCTCAGAACGCTACGGGCCCATGTTCACAATCCATCTGGGATCTCAGAAGACCGTGGTGCTGTCGGGCTATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031521.13 |
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| CDS TCA 90 bp | GTTGAACTGGCTTGGGGTCTCCCACTGCGTCTTGTCCAGGAGGACTaGAGTGAGCAAAGGAATCACAGGAGTGCCCTTGGGGAGCAGGTA | + |
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Preference number: 5 (lower is better) Translates to: VELAWGLPLRLVQED*SEQRNHRSALGEQV Trigger: TACCTGCTCCCCAAGGGCACTCCTGTGATTCCTTTGCTCACTTCAGTCCTCCTGGACAAGACGCAGTGGGAGACCCCAAGCCAGTTCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031521.13 |
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| CDS TCA 90 bp | CTTCTGAGATCCCAGATGGATTGTGAACATGGGCCCGTAGCGTTCTaGGAGCTCCATCAGTGCCCGGTCTTGTTGGGTCACACCCAGCAA | + |
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Preference number: 5 (lower is better) Translates to: LLRSQMDCEHGPVAF*ELHQCPVLLGHTQQ Trigger: TTGCTGGGTGTGACCCAACAAGACCGGGCACTGATGGAGCTCTCAGAACGCTACGGGCCCATGTTCACAATCCATCTGGGATCTCAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031521.13 |
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| CDS CCA 90 bp | TTCATAAAGCGCCCCTTCGCGTCCAGAAAGTGGTTTGGGTTGAACTaGCTTGGGGTCTCCCACTGCGTCTTGTCCAGGAGGACTGAAGTG | + |
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Preference number: 5 (lower is better) Translates to: FIKRPFASRKWFGLN*LGVSHCVLSRRTEV Trigger: CACTTCAGTCCTCCTGGACAAGACGCAGTGGGAGACCCCAAGCCAGTTCAACCCAAACCACTTTCTGGACGCGAAGGGGCGCTTTATGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031521.13 |
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| CDS GCA 72 bp | CTGGCCGAAGAGAAGTGTGAAGGTGATGTTGCAGGGTaGCCAACCCAGCAGCGCCAGGGGGAGGGGCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: LAEEKCEGDVAG*PTQQRQGEGLA Trigger: GGCCAGCCCCTCCCCCTGGCGCTGCTGGGTTGGGCACCCTGCAACATCACCTTCACACTTCTCTTCGGCCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031521.13 |
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| CDS CAA 90 bp | CGCGTTTCCAGCAGGGTTCTCAGGATGGTGCGCACCTCCTCGATCTaGCTCAAGACCGGCCTGTGCAACCGCAGGAAGGCCCCCAGCCGG | + |
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Preference number: 6 (lower is better) Translates to: RVSSRVLRMVRTSSI*LKTGLCNRRKAPSR Trigger: CCGGCTGGGGGCCTTCCTGCGGTTGCACAGGCCGGTCTTGAGCAAGATCGAGGAGGTGCGCACCATCCTGAGAACCCTGCTGGAAACGCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031521.13 ENSMUST00000197955.2 |
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| CDS TCA 72 bp | GCTGTTGCACACCCAGGCTCTGCAGTGTGCGCACCGTaGATTGGCGACCCGCCCTCCAGCGAGCTCCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: AVAHPGSAVCAP*IGDPPSSELQK Trigger: CTTCTGGAGCTCGCTGGAGGGCGGGTCGCCAATTCACGGTGCGCACACTGCAGAGCCTGGGTGTGCAACAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031521.13 |
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| CDS GCA 72 bp | TTGCCCACCATGGATGGCTGTTGCACACCCAGGCTCTaGAGTGTGCGCACCGTGAATTGGCGACCCGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: LPTMDGCCTPRL*SVRTVNWRPAL Trigger: GAGGGCGGGTCGCCAATTCACGGTGCGCACACTGCAGAGCCTGGGTGTGCAACAGCCATCCATGGTGGGCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031521.13 |
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| CDS GCA 72 bp | GCAGGGTTCTCAGGATGGTGCGCACCTCCTCGATCTTaGTCAAGACCGGCCTGTGCAACCGCAGGAAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: AGFSGWCAPPRS*SRPACATAGRP Trigger: GGGCCTTCCTGCGGTTGCACAGGCCGGTCTTGAGCAAGATCGAGGAGGTGCGCACCATCCTGAGAACCCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031521.13 ENSMUST00000197955.2 |
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| CDS CCA 72 bp | ACAGGCCAGCTCCTGCAGCACCTTGCCCACCATGGATaGCTGTTGCACACCCAGGCTCTGCAGTGTGCGCAC | + |
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Preference number: 6 (lower is better) Translates to: TGQLLQHLAHHG*LLHTQALQCAH Trigger: GTGCGCACACTGCAGAGCCTGGGTGTGCAACAGCCATCCATGGTGGGCAAGGTGCTGCAGGAGCTGGCCTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031521.13 |
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| CDS CCA 72 bp | CCCAGCTGGATGTCAGCAGCTGTGCAGCGGGGCACATaGGGCAGGAGTGTGATGTACCGCTGGACCTCATGC | + |
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Preference number: 6 (lower is better) Translates to: PSWMSAAVQRGT*GRSVMYRWTSC Trigger: GCATGAGGTCCAGCGGTACATCACACTCCTGCCCCATGTGCCCCGCTGCACAGCTGCTGACATCCAGCTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031521.13 ENSMUST00000197955.2 |
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| CDS CAA 90 bp | AAGACAGGCCAGCTCCTGCAGCACCTTGCCCACCATGGATGGCTGTaGCACACCCAGGCTCTGCAGTGTGCGCACCGTGAATTGGCGACC | + |
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Preference number: 6 (lower is better) Translates to: KTGQLLQHLAHHGWL*HTQALQCAHRELAT Trigger: GGTCGCCAATTCACGGTGCGCACACTGCAGAGCCTGGGTGTGCAACAGCCATCCATGGTGGGCAAGGTGCTGCAGGAGCTGGCCTGTCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031521.13 |
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| CDS GCA 72 bp | TGGAAGATGGGAATTGGGGGCCGGTCGGCTAGCTCATaGCCGGTTCCAACCAAGGCCTCCCTCACCACCTCA | + |
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Preference number: 6 (lower is better) Translates to: WKMGIGGRSASS*PVPTKASLTTS Trigger: TGAGGTGGTGAGGGAGGCCTTGGTTGGAACCGGGCATGAGCTAGCCGACCGGCCCCCAATTCCCATCTTCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031521.13 |
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| CDS GCA 72 bp | AGCTGCCCAGGACCCAGCACTCGGTCCAGTTCCTCCTaGACGCGACCCTGCACATGTGGGTGCTTAACCATC | + |
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Preference number: 6 (lower is better) Translates to: SCPGPSTRSSSS*TRPCTCGCLTI Trigger: GATGGTTAAGCACCCACATGTGCAGGGTCGCGTGCAGGAGGAACTGGACCGAGTGCTGGGTCCTGGGCAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031521.13 ENSMUST00000197955.2 |
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| CDS CCA 72 bp | TGCACACCCAGGCTCTGCAGTGTGCGCACCGTGAATTaGCGACCCGCCCTCCAGCGAGCTCCAGAAGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: CTPRLCSVRTVN*RPALQRAPEEK Trigger: CTTTTCTTCTGGAGCTCGCTGGAGGGCGGGTCGCCAATTCACGGTGCGCACACTGCAGAGCCTGGGTGTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031521.13 |
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| CDS CCA 72 bp | AGGGTGGTCTCCGCGTTTCCAGCAGGGTTCTCAGGATaGTGCGCACCTCCTCGATCTTGCTCAAGACCGGCC | + |
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Preference number: 6 (lower is better) Translates to: RVVSAFPAGFSG*CAPPRSCSRPA Trigger: GGCCGGTCTTGAGCAAGATCGAGGAGGTGCGCACCATCCTGAGAACCCTGCTGGAAACGCGGAGACCACCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031521.13 ENSMUST00000197955.2 |
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| CDS CAA 72 bp | AGCAGGGTTCTCAGGATGGTGCGCACCTCCTCGATCTaGCTCAAGACCGGCCTGTGCAACCGCAGGAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: SRVLRMVRTSSI*LKTGLCNRRKA Trigger: GGCCTTCCTGCGGTTGCACAGGCCGGTCTTGAGCAAGATCGAGGAGGTGCGCACCATCCTGAGAACCCTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031521.13 ENSMUST00000197955.2 |
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| CDS CAA 72 bp | GCAGAGCTTCTACATAACTCTGCGCGGGACCGCCCGTaGGCAAGGGTGGTCTCCGCGTTTCCAGCAGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: AELLHNSARDRP*ARVVSAFPAGF Trigger: GAACCCTGCTGGAAACGCGGAGACCACCCTTGCCAACGGGCGGTCCCGCGCAGAGTTATGTAGAAGCTCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031521.13 ENSMUST00000197955.2 |
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| CDS CAA 90 bp | CCTGCTGAAGCAGAGCTTCTACATAACTCTGCGCGGGACCGCCCGTaGGCAAGGGTGGTCTCCGCGTTTCCAGCAGGGTTCTCAGGATGG | + |
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Preference number: 6 (lower is better) Translates to: PAEAELLHNSARDRP*ARVVSAFPAGFSGW Trigger: CCATCCTGAGAACCCTGCTGGAAACGCGGAGACCACCCTTGCCAACGGGCGGTCCCGCGCAGAGTTATGTAGAAGCTCTGCTTCAGCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031521.13 ENSMUST00000197955.2 |
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| CDS GCA 72 bp | GTGGTCTCCGCGTTTCCAGCAGGGTTCTCAGGATGGTaGGCACCTCCTCGATCTTGCTCAAGACCGGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: VVSAFPAGFSGW*APPRSCSRPAC Trigger: ACAGGCCGGTCTTGAGCAAGATCGAGGAGGTGCGCACCATCCTGAGAACCCTGCTGGAAACGCGGAGACCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031521.13 ENSMUST00000197955.2 |
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| CDS GCA 72 bp | ACATGTGGGTGCTTAACCATCAGGAAGACGGCCCACTaGAGCGTGGCCGCCGTGGTCTCTGTTCCAGCCATG | + |
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Preference number: 6 (lower is better) Translates to: TCGCLTIRKTAH*SVAAVVSVPAM Trigger: CATGGCTGGAACAGAGACCACGGCGGCCACGCTGCAGTGGGCCGTCTTCCTGATGGTTAAGCACCCACATGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031521.13 ENSMUST00000197955.2 |
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| CDS CCA 72 bp | CGCCCCTTCGCGTCCAGAAAGTGGTTTGGGTTGAACTaGCTTGGGGTCTCCCACTGCGTCTTGTCCAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: RPFASRKWFGLN*LGVSHCVLSRR Trigger: CCTCCTGGACAAGACGCAGTGGGAGACCCCAAGCCAGTTCAACCCAAACCACTTTCTGGACGCGAAGGGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031521.13 |
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| CDS CAA 72 bp | TTGCACACCCAGGCTCTGCAGTGTGCGCACCGTGAATaGGCGACCCGCCCTCCAGCGAGCTCCAGAAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: LHTQALQCAHRE*ATRPPASSRRK Trigger: TTTTCTTCTGGAGCTCGCTGGAGGGCGGGTCGCCAATTCACGGTGCGCACACTGCAGAGCCTGGGTGTGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031521.13 |
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| CDS CAA 90 bp | GGATGGCTGTTGCACACCCAGGCTCTGCAGTGTGCGCACCGTGAATaGGCGACCCGCCCTCCAGCGAGCTCCAGAAGAAAAGAAAATGCC | + |
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Preference number: 6 (lower is better) Translates to: GWLLHTQALQCAHRE*ATRPPASSRRKENA Trigger: GGCATTTTCTTTTCTTCTGGAGCTCGCTGGAGGGCGGGTCGCCAATTCACGGTGCGCACACTGCAGAGCCTGGGTGTGCAACAGCCATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031521.13 |
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| CDS CAA 72 bp | AGCTGTCCTTTAAGACAGGCCAGCTCCTGCAGCACCTaGCCCACCATGGATGGCTGTTGCACACCCAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: SCPLRQASSCST*PTMDGCCTPRL Trigger: GAGCCTGGGTGTGCAACAGCCATCCATGGTGGGCAAGGTGCTGCAGGAGCTGGCCTGTCTTAAAGGACAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031521.13 |
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| CDS CAA 90 bp | GTCTCTGTTCCAGCCATGACCATGTCCAGTGTACAGGCCAGGACATaGGCCTCGCCAAACATGTCCTCAGGGTCATCTTCCTGGCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: VSVPAMTMSSVQART*ASPNMSSGSSSWPC Trigger: GCAGGGCCAGGAAGATGACCCTGAGGACATGTTTGGCGAGGCCAATGTCCTGGCCTGTACACTGGACATGGTCATGGCTGGAACAGAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031521.13 ENSMUST00000197955.2 |
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| CDS TCA 72 bp | GGGTCTCCCACTGCGTCTTGTCCAGGAGGACTGAAGTaGGCAAAGGAATCACAGGAGTGCCCTTGGGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: GSPTASCPGGLK*AKESQECPWGA Trigger: TGCTCCCCAAGGGCACTCCTGTGATTCCTTTGCTCACTTCAGTCCTCCTGGACAAGACGCAGTGGGAGACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031521.13 ENSMUST00000197955.2 |
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| CDS TCA 72 bp | GCTTGGGGTCTCCCACTGCGTCTTGTCCAGGAGGACTaGAGTGAGCAAAGGAATCACAGGAGTGCCCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: AWGLPLRLVQED*SEQRNHRSALG Trigger: CCCAAGGGCACTCCTGTGATTCCTTTGCTCACTTCAGTCCTCCTGGACAAGACGCAGTGGGAGACCCCAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031521.13 |
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| CDS TCA 72 bp | TCCCAGATGGATTGTGAACATGGGCCCGTAGCGTTCTaGGAGCTCCATCAGTGCCCGGTCTTGTTGGGTCAC | + |
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Preference number: 6 (lower is better) Translates to: SQMDCEHGPVAF*ELHQCPVLLGH Trigger: GTGACCCAACAAGACCGGGCACTGATGGAGCTCTCAGAACGCTACGGGCCCATGTTCACAATCCATCTGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031521.13 |
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| CDS CAA 72 bp | CCAGCCATGACCATGTCCAGTGTACAGGCCAGGACATaGGCCTCGCCAAACATGTCCTCAGGGTCATCTTCC | + |
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Preference number: 6 (lower is better) Translates to: PAMTMSSVQART*ASPNMSSGSSS Trigger: GGAAGATGACCCTGAGGACATGTTTGGCGAGGCCAATGTCCTGGCCTGTACACTGGACATGGTCATGGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031521.13 ENSMUST00000197955.2 |
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| CDS CAA 72 bp | ATAAAGCGCCCCTTCGCGTCCAGAAAGTGGTTTGGGTaGAACTGGCTTGGGGTCTCCCACTGCGTCTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: IKRPFASRKWFG*NWLGVSHCVLS Trigger: GGACAAGACGCAGTGGGAGACCCCAAGCCAGTTCAACCCAAACCACTTTCTGGACGCGAAGGGGCGCTTTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031521.13 |
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| CDS CCA 72 bp | CTTCATAAAGCGCCCCTTCGCGTCCAGAAAGTGGTTTaGGTTGAACTGGCTTGGGGTCTCCCACTGCGTCTT | + |
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Preference number: 6 (lower is better) Translates to: LHKAPLRVQKVV*VELAWGLPLRL Trigger: AAGACGCAGTGGGAGACCCCAAGCCAGTTCAACCCAAACCACTTTCTGGACGCGAAGGGGCGCTTTATGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031521.13 |
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| CDS CAA 90 bp | AGAAAGTGGTTTGGGTTGAACTGGCTTGGGGTCTCCCACTGCGTCTaGTCCAGGAGGACTGAAGTGAGCAAAGGAATCACAGGAGTGCCC | + |
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Preference number: 6 (lower is better) Translates to: RKWFGLNWLGVSHCV*SRRTEVSKGITGVP Trigger: GGGCACTCCTGTGATTCCTTTGCTCACTTCAGTCCTCCTGGACAAGACGCAGTGGGAGACCCCAAGCCAGTTCAACCCAAACCACTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031521.13 |
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| CDS TCA 72 bp | ACAGCACCACGGTCTTCTGAGATCCCAGATGGATTGTaGACATGGGCCCGTAGCGTTCTGAGAGCTCCATCA | + |
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Preference number: 6 (lower is better) Translates to: TAPRSSEIPDGL*TWARSVLRAPS Trigger: TGATGGAGCTCTCAGAACGCTACGGGCCCATGTTCACAATCCATCTGGGATCTCAGAAGACCGTGGTGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031521.13 |
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| CDS CAA 72 bp | TTTGGGTTGAACTGGCTTGGGGTCTCCCACTGCGTCTaGTCCAGGAGGACTGAAGTGAGCAAAGGAATCACA | + |
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Preference number: 6 (lower is better) Translates to: FGLNWLGVSHCV*SRRTEVSKGIT Trigger: TGTGATTCCTTTGCTCACTTCAGTCCTCCTGGACAAGACGCAGTGGGAGACCCCAAGCCAGTTCAACCCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031521.13 |
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