Pregenerated sensors for CYP2U1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027983Ensembl transcript IDs: ENSMUST00000106337.7, ENSMUST00000200236.2
Found 190 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCTACCTCACTTCCGAGTTGCCTGGGCATCCCAAGAATCAGGCATaGCGAGGGGGCAGCAGCGTGCAGCCTGGCCGGAGGAGTCAGCTG | + |
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Preference number: 1 (lower is better) Translates to: PYLTSELPGHPKNQA*RGGSSVQPGRRSQL Trigger: CAGCTGACTCCTCCGGCCAGGCTGCACGCTGCTGCCCCCTCGCCATGCCTGATTCTTGGGATGCCCAGGCAACTCGGAAGTGAGGTAGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR GCA 90 bp | ATGCTTCCCCGTGGCCAGTGGGCACCACTCAGCCTCTCCTGGCTGTaGCGAACTGCGAGGCCCATGCTCAGCAGCAATAGGAAGGCTGTC | + |
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Preference number: 1 (lower is better) Translates to: MLPRGQWAPLSLSWL*RTARPMLSSNRKAV Trigger: GACAGCCTTCCTATTGCTGCTGAGCATGGGCCTCGCAGTTCGGCACAGCCAGGAGAGGCTGAGTGGTGCCCACTGGCCACGGGGAAGCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR GCA 90 bp | CCAATCGTGCCCCTGCACTCACCTACGCGGGGCAGACCTGTGCTGTaGAGCCAGGCTCACCGTTCACGTGGCTACAGACAGCAGACACAC | + |
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Preference number: 1 (lower is better) Translates to: PIVPLHSPTRGRPVL*SQAHRSRGYRQQTH Trigger: GTGTGTCTGCTGTCTGTAGCCACGTGAACGGTGAGCCTGGCTGCACAGCACAGGTCTGCCCCGCGTAGGTGAGTGCAGGGGCACGATTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR CCA 90 bp | GTGTCCATGCTTCCCCGTGGCCAGTGGGCACCACTCAGCCTCTCCTaGCTGTGCCGAACTGCGAGGCCCATGCTCAGCAGCAATAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: VSMLPRGQWAPLSLS*LCRTARPMLSSNRK Trigger: CTTCCTATTGCTGCTGAGCATGGGCCTCGCAGTTCGGCACAGCCAGGAGAGGCTGAGTGGTGCCCACTGGCCACGGGGAAGCATGGACAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR GCA 90 bp | TTCTCGGGAGACCCGAGGGAGGGGCCAGACACAAGCACACTGAGATaGACACTGTTGGCTGTGGGCTGGCTTTGCCACCAGCCATCCCTT | + |
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Preference number: 1 (lower is better) Translates to: FSGDPREGPDTSTLR*TLLAVGWLCHQPSL Trigger: AAGGGATGGCTGGTGGCAAAGCCAGCCCACAGCCAACAGTGTGCATCTCAGTGTGCTTGTGTCTGGCCCCTCCCTCGGGTCTCCCGAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR CCA 90 bp | GGGCCAGACACAAGCACACTGAGATGCACACTGTTGGCTGTGGGCTaGCTTTGCCACCAGCCATCCCTTACCCCTGGCAGCAAAAGGGAC | + |
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Preference number: 1 (lower is better) Translates to: GPDTSTLRCTLLAVG*LCHQPSLTPGSKRD Trigger: GTCCCTTTTGCTGCCAGGGGTAAGGGATGGCTGGTGGCAAAGCCAGCCCACAGCCAACAGTGTGCATCTCAGTGTGCTTGTGTCTGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR CCA 90 bp | AGGAAGCAGCTGAGAGTAGGCCTGGGTACCTCAGCGAGCGGCCTGTaGATGCACGCAGTGCGAAGCTGCTGGAAGCTTCCATTCTGGGTT | + |
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Preference number: 1 (lower is better) Translates to: RKQLRVGLGTSASGL*MHAVRSCWKLPFWV Trigger: AACCCAGAATGGAAGCTTCCAGCAGCTTCGCACTGCGTGCATCCACAGGCCGCTCGCTGAGGTACCCAGGCCTACTCTCAGCTGCTTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR GCA 90 bp | CTGGGTACCTCAGCGAGCGGCCTGTGGATGCACGCAGTGCGAAGCTaGTGGAAGCTTCCATTCTGGGTTGTCTTAGCAGCTAAGGCCTCA | + |
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Preference number: 1 (lower is better) Translates to: LGTSASGLWMHAVRS*WKLPFWVVLAAKAS Trigger: TGAGGCCTTAGCTGCTAAGACAACCCAGAATGGAAGCTTCCAGCAGCTTCGCACTGCGTGCATCCACAGGCCGCTCGCTGAGGTACCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR CCA 90 bp | TCTGATGGAATCCACACAACTAAACCGAGTGTCCATGCTTCCCCGTaGCCAGTGGGCACCACTCAGCCTCTCCTGGCTGTGCCGAACTGC | + |
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Preference number: 1 (lower is better) Translates to: SDGIHTTKPSVHASP*PVGTTQPLLAVPNC Trigger: GCAGTTCGGCACAGCCAGGAGAGGCTGAGTGGTGCCCACTGGCCACGGGGAAGCATGGACACTCGGTTTAGTTGTGTGGATTCCATCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR GCA 90 bp | GACACAAGCACACTGAGATGCACACTGTTGGCTGTGGGCTGGCTTTaGCACCAGCCATCCCTTACCCCTGGCAGCAAAAGGGACAATGCC | + |
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Preference number: 1 (lower is better) Translates to: DTSTLRCTLLAVGWL*HQPSLTPGSKRDNA Trigger: GGCATTGTCCCTTTTGCTGCCAGGGGTAAGGGATGGCTGGTGGCAAAGCCAGCCCACAGCCAACAGTGTGCATCTCAGTGTGCTTGTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR GCA 90 bp | TTGCAGGGAGGGGCCTTGGGAGGTCCGAAGGCAGATCTACTGATTTaGCCAGCATCTGCCACCAGCACAGACTTCATGAAGCATCCAGTT | + |
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Preference number: 1 (lower is better) Translates to: LQGGALGGPKADLLI*PASATSTDFMKHPV Trigger: AACTGGATGCTTCATGAAGTCTGTGCTGGTGGCAGATGCTGGGCAAATCAGTAGATCTGCCTTCGGACCTCCCAAGGCCCCTCCCTGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR TCA 90 bp | AGTGCTCTCCAGTCACAAGGCCAAGTAGCTTGGAGACCCGGTGGGTaGTGGCACTTTTTAATTCTGGGCCTTAGCACTGGAGAACCTCAG | + |
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Preference number: 1 (lower is better) Translates to: SALQSQGQVAWRPGG*WHFLILGLSTGEPQ Trigger: CTGAGGTTCTCCAGTGCTAAGGCCCAGAATTAAAAAGTGCCATCACCCACCGGGTCTCCAAGCTACTTGGCCTTGTGACTGGAGAGCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR CCA 90 bp | GGCCTGTGGATGCACGCAGTGCGAAGCTGCTGGAAGCTTCCATTCTaGGTTGTCTTAGCAGCTAAGGCCTCATCCTGGATTTGCCTAAAA | + |
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Preference number: 1 (lower is better) Translates to: GLWMHAVRSCWKLPF*VVLAAKASSWICLK Trigger: TTTTAGGCAAATCCAGGATGAGGCCTTAGCTGCTAAGACAACCCAGAATGGAAGCTTCCAGCAGCTTCGCACTGCGTGCATCCACAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR TCA 90 bp | GTGGCTGATGGCACAGCAGGAGAGGAGGGTTCTGAGTCACTTGAGTaGGAAATCCCTTCCGGACCAATCCCACAACTCCATTATCACACT | + |
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Preference number: 1 (lower is better) Translates to: VADGTAGEEGSESLE*EIPSGPIPQLHYHT Trigger: AGTGTGATAATGGAGTTGTGGGATTGGTCCGGAAGGGATTTCTCACTCAAGTGACTCAGAACCCTCCTCTCCTGCTGTGCCATCAGCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR CCA 90 bp | AGCCAGGCTCACCGTTCACGTGGCTACAGACAGCAGACACACGGGTaGACAACAACCTCAAGAGGATGCTTTTCATTTTCTCAACATACT | + |
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Preference number: 1 (lower is better) Translates to: SQAHRSRGYRQQTHG*TTTSRGCFSFSQHT Trigger: AGTATGTTGAGAAAATGAAAAGCATCCTCTTGAGGTTGTTGTCCACCCGTGTGTCTGCTGTCTGTAGCCACGTGAACGGTGAGCCTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR CCA 90 bp | ATCACGCAATGGCTTCTTGTCTTGAAGAGTAAGTCAGTCATACTGTaGCTGATGGCACAGCAGGAGAGGAGGGTTCTGAGTCACTTGAGT | + |
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Preference number: 1 (lower is better) Translates to: ITQWLLVLKSKSVIL*LMAQQERRVLSHLS Trigger: ACTCAAGTGACTCAGAACCCTCCTCTCCTGCTGTGCCATCAGCCACAGTATGACTGACTTACTCTTCAAGACAAGAAGCCATTGCGTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR-3UTR CCA 90 bp | GGGCATCCCAAGAATCAGGCATGGCGAGGGGGCAGCAGCGTGCAGCCTGGCCGGCTGTTGGCTGTGGGCTaGCTTTGCCACCAGCCATCC | + |
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Preference number: 2 (lower is better) Translates to: GHPKNQAWRGGSSVQPGRLLAVG*LCHQPS Trigger: GGATGGCTGGTGGCAAAGCCAGCCCACAGCCAACAG...CCGGCCAGGCTGCACGCTGCTGCCCCCTCGCCATGCCTGATTCTTGGGATGCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR-3UTR GCA 90 bp | GGGCATCCCAAGAATCAGGCATGGCGAGGGGGCAGCAGCGTGCAGCCTGGCCGGGAACTGCGAGGCCCATaGTCAGCAGCAATAGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: GHPKNQAWRGGSSVQPGRELRGP*SAAIGR Trigger: CCTTCCTATTGCTGCTGAGCATGGGCCTCGCAGTTC...CCGGCCAGGCTGCACGCTGCTGCCCCCTCGCCATGCCTGATTCTTGGGATGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR-3UTR TCA 90 bp | GCCTGGGCATCCCAAGAATCAGGCATGGCGAGGGGGCAGCAGCGTGCAGCCTGGCAGACACAAGCACACTaGGATGCACACTGTTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: AWASQESGMARGQQRAAWQTQAH*DAHCWL Trigger: CAGCCAACAGTGTGCATCTCAGTGTGCTTGTGTCTG...CCAGGCTGCACGCTGCTGCCCCCTCGCCATGCCTGATTCTTGGGATGCCCAGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR-3UTR TCA 90 bp | GGGCATCCCAAGAATCAGGCATGGCGAGGGGGCAGCAGCGTGCAGCCTGGCCGGTGGAGACCCGGTGGGTaGTGGCACTTTTTAATTCTG | + |
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Preference number: 2 (lower is better) Translates to: GHPKNQAWRGGSSVQPGRWRPGG*WHFLIL Trigger: CAGAATTAAAAAGTGCCATCACCCACCGGGTCTCCA...CCGGCCAGGCTGCACGCTGCTGCCCCCTCGCCATGCCTGATTCTTGGGATGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR-3UTR TCA 90 bp | GCCTGGGCATCCCAAGAATCAGGCATGGCGAGGGGGCAGCAGCGTGCAGCCTGGACGGAGGCTGAGAGATaGGAAGCACTGCTTTCTGAT | + |
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Preference number: 2 (lower is better) Translates to: AWASQESGMARGQQRAAWTEAER*EALLSD Trigger: ATCAGAAAGCAGTGCTTCTCATCTCTCAGCCTCCGT...CCAGGCTGCACGCTGCTGCCCCCTCGCCATGCCTGATTCTTGGGATGCCCAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR-3UTR CCA 90 bp | CGGAGGCCAGCTTCAGGACCACGTGGGGCAATACTGAGATGGGGCTCAGAAAGTGCACACTGTTGGCTGTaGGCTGGCTTTGCCACCAGC | + |
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Preference number: 2 (lower is better) Translates to: RRPASGPRGAILRWGSESAHCWL*AGFATS Trigger: GCTGGTGGCAAAGCCAGCCCACAGCCAACAGTGTGC...ACTTTCTGAGCCCCATCTCAGTATTGCCCCACGTGGTCCTGAAGCTGGCCTCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR-3UTR CCA 90 bp | AGCTGCTGGAAGCTTCCATTCTGGGTTGTCTTAGCAGCTAAGGCCTCATCCTGGGCCGGAGGAGTCAGCTaGGGCAGAGAGGGGCACAGG | + |
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Preference number: 2 (lower is better) Translates to: SCWKLPFWVVLAAKASSWAGGVS*GREGHR Trigger: CCTGTGCCCCTCTCTGCCCCAGCTGACTCCTCCGGC...CCAGGATGAGGCCTTAGCTGCTAAGACAACCCAGAATGGAAGCTTCCAGCAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR-3UTR CCA 90 bp | CGGAGGCCAGCTTCAGGACCACGTGGGGCAATACTGAGATGGGGCTCAGAAAGTTTTCCATGTGGCCCTTaGAGGAGCCATGAGAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: RRPASGPRGAILRWGSESFPCGP*RSHERA Trigger: GGCCCTCTCATGGCTCCTCCAAGGGCCACATGGAAA...ACTTTCTGAGCCCCATCTCAGTATTGCCCCACGTGGTCCTGAAGCTGGCCTCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR-3UTR GCA 90 bp | AGCTTCAGGACCACGTGGGGCAATACTGAGATGGGGCTCAGAAAGTGCTCTCCAGCTGTGGGCTGGCTTTaGCACCAGCCATCCCTTACC | + |
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Preference number: 2 (lower is better) Translates to: SFRTTWGNTEMGLRKCSPAVGWL*HQPSLT Trigger: GGTAAGGGATGGCTGGTGGCAAAGCCAGCCCACAGC...TGGAGAGCACTTTCTGAGCCCCATCTCAGTATTGCCCCACGTGGTCCTGAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR CAA 90 bp | GTTGCAGGGAGGGGCCTTGGGAGGTCCGAAGGCAGATCTACTGATTaGCCCAGCATCTGCCACCAGCACAGACTTCATGAAGCATCCAGT | + |
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Preference number: 2 (lower is better) Translates to: VAGRGLGRSEGRSTD*PSICHQHRLHEASS Trigger: ACTGGATGCTTCATGAAGTCTGTGCTGGTGGCAGATGCTGGGCAAATCAGTAGATCTGCCTTCGGACCTCCCAAGGCCCCTCCCTGCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR CAA 90 bp | AGACACAAGCACACTGAGATGCACACTGTTGGCTGTGGGCTGGCTTaGCCACCAGCCATCCCTTACCCCTGGCAGCAAAAGGGACAATGC | + |
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Preference number: 2 (lower is better) Translates to: RHKHTEMHTVGCGLA*PPAIPYPWQQKGQC Trigger: GCATTGTCCCTTTTGCTGCCAGGGGTAAGGGATGGCTGGTGGCAAAGCCAGCCCACAGCCAACAGTGTGCATCTCAGTGTGCTTGTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR-3UTR TCA 90 bp | CGGAGGCCAGCTTCAGGACCACGTGGGGCAATACTGAGATGGGGCTCAGAAAGTTCTGAGTCACTTGAGTaGGAAATCCCTTCCGGACCA | + |
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Preference number: 2 (lower is better) Translates to: RRPASGPRGAILRWGSESSESLE*EIPSGP Trigger: TGGTCCGGAAGGGATTTCTCACTCAAGTGACTCAGA...ACTTTCTGAGCCCCATCTCAGTATTGCCCCACGTGGTCCTGAAGCTGGCCTCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR-3UTR TCA 90 bp | ATCTTTAGCCCCTCGTCTTTAGTGTGCTGGCCTAGACGCAGTCTTGAGGGAGCCCAGTCATACTGTGGCTaGTGGCACAGCAGGAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: IFSPSSLVCWPRRSLEGAQSYCG*WHSRRG Trigger: TCCTCTCCTGCTGTGCCATCAGCCACAGTATGACTG...GGCTCCCTCAAGACTGCGTCTAGGCCAGCACACTAAAGACGAGGGGCTAAAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR-3UTR GCA 90 bp | GCAGGATTTCCCATTCCACACCTTATCCACAATGTGAGCATCTTTAGCCCCTCGCTGGCTGTGCCGAACTaGGAGGCCCATGCTCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: AGFPIPHLIHNVSIFSPSLAVPN*EAHAQQ Trigger: CTGCTGAGCATGGGCCTCGCAGTTCGGCACAGCCAG...CGAGGGGCTAAAGATGCTCACATTGTGGATAAGGTGTGGAATGGGAAATCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR-3UTR CCA 90 bp | GTGCGAAGCTGCTGGAAGCTTCCATTCTGGGTTGTCTTAGCAGCTAAGGCCTCAAGCTTCAGGACCACGTaGGGCAATACTGAGATGGGG | + |
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Preference number: 2 (lower is better) Translates to: VRSCWKLPFWVVLAAKASSFRTT*GNTEMG Trigger: CCCCATCTCAGTATTGCCCCACGTGGTCCTGAAGCT...TGAGGCCTTAGCTGCTAAGACAACCCAGAATGGAAGCTTCCAGCAGCTTCGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR-3UTR GCA 90 bp | AGCTGCTGGAAGCTTCCATTCTGGGTTGTCTTAGCAGCTAAGGCCTCATCCTGGGCAGATCTACTGATTTaGCCAGCATCTGCCACCAGC | + |
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Preference number: 2 (lower is better) Translates to: SCWKLPFWVVLAAKASSWADLLI*PASATS Trigger: GCTGGTGGCAGATGCTGGGCAAATCAGTAGATCTGC...CCAGGATGAGGCCTTAGCTGCTAAGACAACCCAGAATGGAAGCTTCCAGCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR-3UTR GCA 90 bp | AGCTGCTGGAAGCTTCCATTCTGGGTTGTCTTAGCAGCTAAGGCCTCATCCTGGACCTCACTTCCGAGTTaGCTGGGCATCCCAAGAATC | + |
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Preference number: 2 (lower is better) Translates to: SCWKLPFWVVLAAKASSWTSLPS*LGIPRI Trigger: GATTCTTGGGATGCCCAGGCAACTCGGAAGTGAGGT...CCAGGATGAGGCCTTAGCTGCTAAGACAACCCAGAATGGAAGCTTCCAGCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR-3UTR CCA 90 bp | AGCTGCTGGAAGCTTCCATTCTGGGTTGTCTTAGCAGCTAAGGCCTCATCCTGGCAGCAGACACACGGGTaGACAACAACCTCAAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: SCWKLPFWVVLAAKASSWQQTHG*TTTSRG Trigger: TCCTCTTGAGGTTGTTGTCCACCCGTGTGTCTGCTG...CCAGGATGAGGCCTTAGCTGCTAAGACAACCCAGAATGGAAGCTTCCAGCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR-3UTR CCA 90 bp | ATCTTTAGCCCCTCGTCTTTAGTGTGCTGGCCTAGACGCAGTCTTGAGGGAGCCAAGTCAGTCATACTGTaGCTGATGGCACAGCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: IFSPSSLVCWPRRSLEGAKSVIL*LMAQQE Trigger: CTCCTGCTGTGCCATCAGCCACAGTATGACTGACTT...GGCTCCCTCAAGACTGCGTCTAGGCCAGCACACTAAAGACGAGGGGCTAAAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR-3UTR GCA 90 bp | AGCTGCTGGAAGCTTCCATTCTGGGTTGTCTTAGCAGCTAAGGCCTCATCCTGGGATTTGCCCAGCATCTaGCACCAGCACAGACTTCAT | + |
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Preference number: 2 (lower is better) Translates to: SCWKLPFWVVLAAKASSWDLPSI*HQHRLH Trigger: ATGAAGTCTGTGCTGGTGGCAGATGCTGGGCAAATC...CCAGGATGAGGCCTTAGCTGCTAAGACAACCCAGAATGGAAGCTTCCAGCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR CAA 90 bp | ATACTGTGGCTGATGGCACAGCAGGAGAGGAGGGTTCTGAGTCACTaGAGTGAGAAATCCCTTCCGGACCAATCCCACAACTCCATTATC | + |
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Preference number: 2 (lower is better) Translates to: ILWLMAQQERRVLSH*SEKSLPDQSHNSII Trigger: GATAATGGAGTTGTGGGATTGGTCCGGAAGGGATTTCTCACTCAAGTGACTCAGAACCCTCCTCTCCTGCTGTGCCATCAGCCACAGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR-3UTR GCA 90 bp | GAGGGCCCTCTAATCACGCAATGGCTTCTTGTCTTGAAGAGTAAGTCAGTCATAGCTGACACTAGATGTTaGAGGGAGGGGCCTTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: EGPLITQWLLVLKSKSVIADTRC*REGPWE Trigger: CTCCCAAGGCCCCTCCCTGCAACATCTAGTGTCAGC...TATGACTGACTTACTCTTCAAGACAAGAAGCCATTGCGTGATTAGAGGGCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR-3UTR GCA 90 bp | GTGCGAAGCTGCTGGAAGCTTCCATTCTGGGTTGTCTTAGCAGCTAAGGCCTCAACCCATTATGCTCAGTaGATTCCCACATTTCCATGT | + |
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Preference number: 2 (lower is better) Translates to: VRSCWKLPFWVVLAAKASTHYAQ*IPTFPC Trigger: ACATGGAAATGTGGGAATGCACTGAGCATAATGGGT...TGAGGCCTTAGCTGCTAAGACAACCCAGAATGGAAGCTTCCAGCAGCTTCGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR-3UTR TCA 90 bp | AACATACTGGGCAAGGGGACATTTCATCCTAGCTCTATAAAAGGGACACATCCCCCAGCACAGACTTCATaGAGCATCCAGTTCCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: NILGKGTFHPSSIKGTHPPAQTS*SIQFLS Trigger: TGAGAGGAACTGGATGCTTCATGAAGTCTGTGCTGG...GGGATGTGTCCCTTTTATAGAGCTAGGATGAAATGTCCCCTTGCCCAGTATGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR-3UTR TCA 90 bp | GTGCGAAGCTGCTGGAAGCTTCCATTCTGGGTTGTCTTAGCAGCTAAGGCCTCAAATGGCTTCTTGTCTTaGAGAGTAAGTCAGTCATAC | + |
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Preference number: 2 (lower is better) Translates to: VRSCWKLPFWVVLAAKASNGFLS*RVSQSY Trigger: GTATGACTGACTTACTCTTCAAGACAAGAAGCCATT...TGAGGCCTTAGCTGCTAAGACAACCCAGAATGGAAGCTTCCAGCAGCTTCGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR-3UTR CCA 90 bp | TTACTCATATTAGGTTTTTATTTAGCGGCTGTTACCTTCCCTCAGGAAGCAGCTGGGGCAATACTGAGATaGGGCTCAGAAAGTGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: LLILGFYLAAVTFPQEAAGAILR*GSESAL Trigger: GAGAGCACTTTCTGAGCCCCATCTCAGTATTGCCCC...AGCTGCTTCCTGAGGGAAGGTAACAGCCGCTAAATAAAAACCTAATATGAGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR CAA 90 bp | ATCTCAGAGAAGGCGGAAGTCCTTTTCAAGTACGATGTGAAATCTTaGGTTAGGAGGTCCAGAAATCCATGTGCAAGTCATGGAATAAGG | + |
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Preference number: 2 (lower is better) Translates to: ISEKAEVLFKYDVKS*VRRSRNPCASHGIR Trigger: CCTTATTCCATGACTTGCACATGGATTTCTGGACCTCCTAACCAAAGATTTCACATCGTACTTGAAAAGGACTTCCGCCTTCTCTGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR-3UTR GCA 90 bp | AGTATTCAGTATTCTAAGAAAGGCTCAGCATCACCATGGTTCCTTCACGGTTCTAGAGATGAGAAGCACTaGTTTCTGATGGAATCCACA | + |
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Preference number: 2 (lower is better) Translates to: SIQYSKKGSASPWFLHGSRDEKH*FLMEST Trigger: TGTGGATTCCATCAGAAAGCAGTGCTTCTCATCTCT...AGAACCGTGAAGGAACCATGGTGATGCTGAGCCTTTCTTAGAATACTGAATACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR-3UTR CAA 90 bp | GGGCATCCCAAGAATCAGGCATGGCGAGGGGGCAGCAGCGTGCAGCCTGGCCGGTTGCAGGGAGGGGCCTaGGGAGGTCCGAAGGCAGAT | + |
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Preference number: 3 (lower is better) Translates to: GHPKNQAWRGGSSVQPGRLQGGA*GGPKAD Trigger: ATCTGCCTTCGGACCTCCCAAGGCCCCTCCCTGCAA...CCGGCCAGGCTGCACGCTGCTGCCCCCTCGCCATGCCTGATTCTTGGGATGCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR CCA 72 bp | CTTCCCCGTGGCCAGTGGGCACCACTCAGCCTCTCCTaGCTGTGCCGAACTGCGAGGCCCATGCTCAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: LPRGQWAPLSLS*LCRTARPMLSS Trigger: GCTGCTGAGCATGGGCCTCGCAGTTCGGCACAGCCAGGAGAGGCTGAGTGGTGCCCACTGGCCACGGGGAAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| 3UTR CCA 72 bp | ACTTCCGAGTTGCCTGGGCATCCCAAGAATCAGGCATaGCGAGGGGGCAGCAGCGTGCAGCCTGGCCGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: TSELPGHPKNQA*RGGSSVQPGRR Trigger: CCTCCGGCCAGGCTGCACGCTGCTGCCCCCTCGCCATGCCTGATTCTTGGGATGCCCAGGCAACTCGGAAGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| 3UTR GCA 72 bp | CGTGGCCAGTGGGCACCACTCAGCCTCTCCTGGCTGTaGCGAACTGCGAGGCCCATGCTCAGCAGCAATAGG | + |
|
Preference number: 3 (lower is better) Translates to: RGQWAPLSLSWL*RTARPMLSSNR Trigger: CCTATTGCTGCTGAGCATGGGCCTCGCAGTTCGGCACAGCCAGGAGAGGCTGAGTGGTGCCCACTGGCCACG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| 3UTR GCA 72 bp | CCCCTGCACTCACCTACGCGGGGCAGACCTGTGCTGTaGAGCCAGGCTCACCGTTCACGTGGCTACAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: PLHSPTRGRPVL*SQAHRSRGYRQ Trigger: CTGTCTGTAGCCACGTGAACGGTGAGCCTGGCTGCACAGCACAGGTCTGCCCCGCGTAGGTGAGTGCAGGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| 3UTR GCA 72 bp | TCGTGCCCCTGCACTCACCTACGCGGGGCAGACCTGTaGTGTGCAGCCAGGCTCACCGTTCACGTGGCTACA | + |
|
Preference number: 3 (lower is better) Translates to: SCPCTHLRGADL*CAARLTVHVAT Trigger: TGTAGCCACGTGAACGGTGAGCCTGGCTGCACAGCACAGGTCTGCCCCGCGTAGGTGAGTGCAGGGGCACGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| 3UTR GCA 72 bp | ACCGTGGGCGGGCTTTCCCCTACCTCACTTCCGAGTTaGCTGGGCATCCCAAGAATCAGGCATGGCGAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: TVGGLSPTSLPS*LGIPRIRHGEG Trigger: CCCCTCGCCATGCCTGATTCTTGGGATGCCCAGGCAACTCGGAAGTGAGGTAGGGGAAAGCCCGCCCACGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| 3UTR GCA 72 bp | GACCCGAGGGAGGGGCCAGACACAAGCACACTGAGATaGACACTGTTGGCTGTGGGCTGGCTTTGCCACCAG | + |
|
Preference number: 3 (lower is better) Translates to: DPREGPDTSTLR*TLLAVGWLCHQ Trigger: CTGGTGGCAAAGCCAGCCCACAGCCAACAGTGTGCATCTCAGTGTGCTTGTGTCTGGCCCCTCCCTCGGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| 3UTR CCA 72 bp | CTGAGAGTAGGCCTGGGTACCTCAGCGAGCGGCCTGTaGATGCACGCAGTGCGAAGCTGCTGGAAGCTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: LRVGLGTSASGL*MHAVRSCWKLP Trigger: TGGAAGCTTCCAGCAGCTTCGCACTGCGTGCATCCACAGGCCGCTCGCTGAGGTACCCAGGCCTACTCTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| 3UTR GCA 72 bp | TCAGCCTCTCCTGGCTGTGCCGAACTGCGAGGCCCATaGTCAGCAGCAATAGGAAGGCTGTCTAGGACCGAC | + |
|
Preference number: 3 (lower is better) Translates to: SASPGCAELRGP*SAAIGRLSRTD Trigger: GTCGGTCCTAGACAGCCTTCCTATTGCTGCTGAGCATGGGCCTCGCAGTTCGGCACAGCCAGGAGAGGCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| 3UTR GCA 72 bp | TGGGTACCTCAGCGAGCGGCCTGTGGATGCACGCAGTaGGAAGCTGCTGGAAGCTTCCATTCTGGGTTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: WVPQRAACGCTQ*EAAGSFHSGLS Trigger: AGACAACCCAGAATGGAAGCTTCCAGCAGCTTCGCACTGCGTGCATCCACAGGCCGCTCGCTGAGGTACCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| 3UTR CCA 72 bp | ACAAGCACACTGAGATGCACACTGTTGGCTGTGGGCTaGCTTTGCCACCAGCCATCCCTTACCCCTGGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: TSTLRCTLLAVG*LCHQPSLTPGS Trigger: GCTGCCAGGGGTAAGGGATGGCTGGTGGCAAAGCCAGCCCACAGCCAACAGTGTGCATCTCAGTGTGCTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| 3UTR CCA 72 bp | GGGGCACAGGTAACGGAGGCCAGCTTCAGGACCACGTaGGGCAATACTGAGATGGGGCTCAGAAAGTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: GAQVTEASFRTT*GNTEMGLRKCS Trigger: AGAGCACTTTCTGAGCCCCATCTCAGTATTGCCCCACGTGGTCCTGAAGCTGGCCTCCGTTACCTGTGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| 3UTR TCA 72 bp | AGGGAGGGGCCTTGGGAGGTCCGAAGGCAGATCTACTaGTTTGCCCAGCATCTGCCACCAGCACAGACTTCA | + |
|
Preference number: 3 (lower is better) Translates to: REGPWEVRRQIY*FAQHLPPAQTS Trigger: TGAAGTCTGTGCTGGTGGCAGATGCTGGGCAAATCAGTAGATCTGCCTTCGGACCTCCCAAGGCCCCTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| 3UTR GCA 72 bp | TCAGCGAGCGGCCTGTGGATGCACGCAGTGCGAAGCTaGTGGAAGCTTCCATTCTGGGTTGTCTTAGCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: SASGLWMHAVRS*WKLPFWVVLAA Trigger: AGCTGCTAAGACAACCCAGAATGGAAGCTTCCAGCAGCTTCGCACTGCGTGCATCCACAGGCCGCTCGCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| 3UTR CCA 72 bp | GCGAGCGGCCTGTGGATGCACGCAGTGCGAAGCTGCTaGAAGCTTCCATTCTGGGTTGTCTTAGCAGCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: ASGLWMHAVRSC*KLPFWVVLAAK Trigger: CTTAGCTGCTAAGACAACCCAGAATGGAAGCTTCCAGCAGCTTCGCACTGCGTGCATCCACAGGCCGCTCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| 3UTR-3UTR CAA 90 bp | AGCTTCAGGACCACGTGGGGCAATACTGAGATGGGGCTCAGAAAGTGCTCTCCACTGAGATGCACACTGTaGGCTGTGGGCTGGCTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: SFRTTWGNTEMGLRKCSPLRCTL*AVGWLC Trigger: GCAAAGCCAGCCCACAGCCAACAGTGTGCATCTCAG...TGGAGAGCACTTTCTGAGCCCCATCTCAGTATTGCCCCACGTGGTCCTGAAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| 3UTR GCA 72 bp | GGGGCCTTGGGAGGTCCGAAGGCAGATCTACTGATTTaGCCAGCATCTGCCACCAGCACAGACTTCATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: GALGGPKADLLI*PASATSTDFMK Trigger: CTTCATGAAGTCTGTGCTGGTGGCAGATGCTGGGCAAATCAGTAGATCTGCCTTCGGACCTCCCAAGGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| 3UTR CCA 72 bp | AGGCCAGCTTCAGGACCACGTGGGGCAATACTGAGATaGGGCTCAGAAAGTGCTCTCCAGTCACAAGGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: RPASGPRGAILR*GSESALQSQGQ Trigger: TTGGCCTTGTGACTGGAGAGCACTTTCTGAGCCCCATCTCAGTATTGCCCCACGTGGTCCTGAAGCTGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| 3UTR GCA 72 bp | ACCACGTGGGGCAATACTGAGATGGGGCTCAGAAAGTaGTCTCCAGTCACAAGGCCAAGTAGCTTGGAGACC | + |
|
Preference number: 3 (lower is better) Translates to: TTWGNTEMGLRK*SPVTRPSSLET Trigger: GGTCTCCAAGCTACTTGGCCTTGTGACTGGAGAGCACTTTCTGAGCCCCATCTCAGTATTGCCCCACGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| 3UTR-3UTR CAA 90 bp | AGCACTGGAGAACCTCAGCTTCCTCAGTGTGAGGACTGCATATACACAAAAGCAGGCTGTGGGCTGGCTTaGCCACCAGCCATCCCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: STGEPQLPQCEDCIYTKAGCGLA*PPAIPY Trigger: GTAAGGGATGGCTGGTGGCAAAGCCAGCCCACAGCC...TGCTTTTGTGTATATGCAGTCCTCACACTGAGGAAGCTGAGGTTCTCCAGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| 3UTR TCA 72 bp | GGCACAGCAGGAGAGGAGGGTTCTGAGTCACTTGAGTaGGAAATCCCTTCCGGACCAATCCCACAACTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: GTAGEEGSESLE*EIPSGPIPQLH Trigger: ATGGAGTTGTGGGATTGGTCCGGAAGGGATTTCTCACTCAAGTGACTCAGAACCCTCCTCTCCTGCTGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| 3UTR TCA 72 bp | CAGTCACAAGGCCAAGTAGCTTGGAGACCCGGTGGGTaGTGGCACTTTTTAATTCTGGGCCTTAGCACTGGA | + |
|
Preference number: 3 (lower is better) Translates to: QSQGQVAWRPGG*WHFLILGLSTG Trigger: TCCAGTGCTAAGGCCCAGAATTAAAAAGTGCCATCACCCACCGGGTCTCCAAGCTACTTGGCCTTGTGACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| 3UTR CCA 72 bp | AGTATTCAGTATTCTAAGAAAGGCTCAGCATCACCATaGTTCCTTCACGGTTCTCGGGAGACCCGAGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SIQYSKKGSASP*FLHGSRETRGR Trigger: CCTCCCTCGGGTCTCCCGAGAACCGTGAAGGAACCATGGTGATGCTGAGCCTTTCTTAGAATACTGAATACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| 3UTR CCA 72 bp | TGGCTTCTTGTCTTGAAGAGTAAGTCAGTCATACTGTaGCTGATGGCACAGCAGGAGAGGAGGGTTCTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: WLLVLKSKSVIL*LMAQQERRVLS Trigger: ACTCAGAACCCTCCTCTCCTGCTGTGCCATCAGCCACAGTATGACTGACTTACTCTTCAAGACAAGAAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| 3UTR TCA 72 bp | GGCACGGTGTTAAACTGCTGGATAATCGTGGGACTCTaGTGTCATCTCAGAGAAGGCGGAAGTCCTTTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: GTVLNCWIIVGL*CHLREGGSPFQ Trigger: TTGAAAAGGACTTCCGCCTTCTCTGAGATGACATCAGAGTCCCACGATTATCCAGCAGTTTAACACCGTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| 3UTR GCA 72 bp | CCAGCAAAGGTGGAGGTCAGATTAGGACAAACAATCTaGACAGCGAGCAGGATTTCCCATTCCACACCTTAT | + |
|
Preference number: 3 (lower is better) Translates to: PAKVEVRLGQTI*TASRISHSTPY Trigger: ATAAGGTGTGGAATGGGAAATCCTGCTCGCTGTGCAGATTGTTTGTCCTAATCTGACCTCCACCTTTGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| 3UTR-3UTR CAA 90 bp | TTACTCATATTAGGTTTTTATTTAGCGGCTGTTACCTTCCCTCAGGAAGCAGCTGGCAGATCTACTGATTaGCCCAGCATCTGCCACCAG | + |
|
Preference number: 3 (lower is better) Translates to: LLILGFYLAAVTFPQEAAGRSTD*PSICHQ Trigger: CTGGTGGCAGATGCTGGGCAAATCAGTAGATCTGCC...AGCTGCTTCCTGAGGGAAGGTAACAGCCGCTAAATAAAAACCTAATATGAGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| 3UTR TCA 72 bp | ACCTCATTTTACCATGGGATGACGGAGGCTGAGAGATaGGAAGCACTGCTTTCTGATGGAATCCACACAACT | + |
|
Preference number: 3 (lower is better) Translates to: TSFYHGMTEAER*EALLSDGIHTT Trigger: AGTTGTGTGGATTCCATCAGAAAGCAGTGCTTCTCATCTCTCAGCCTCCGTCATCCCATGGTAAAATGAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| 3UTR-3UTR CAA 90 bp | TTACTCATATTAGGTTTTTATTTAGCGGCTGTTACCTTCCCTCAGGAAGCAGCTAGGGTTCTGAGTCACTaGAGTGAGAAATCCCTTCCG | + |
|
Preference number: 3 (lower is better) Translates to: LLILGFYLAAVTFPQEAARVLSH*SEKSLP Trigger: CGGAAGGGATTTCTCACTCAAGTGACTCAGAACCCT...AGCTGCTTCCTGAGGGAAGGTAACAGCCGCTAAATAAAAACCTAATATGAGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| 3UTR TCA 72 bp | CTCGTGATTAGAAAACTGACTCCGGTTAATTTCAGATaGATCGTGACCTGCAAAACCATCCAACAGCAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LVIRKLTPVNFR*IVTCKTIQQQW Trigger: CCACTGCTGTTGGATGGTTTTGCAGGTCACGATTCATCTGAAATTAACCGGAGTCAGTTTTCTAATCACGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| 3UTR TCA 72 bp | CACAGACTTCATGAAGCATCCAGTTCCTCTCAGAGTTaGGAGACGTTTCATTACCTCATTTTACCATGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: HRLHEASSSSQS*ETFHYLILPWD Trigger: ATCCCATGGTAAAATGAGGTAATGAAACGTCTCTCAACTCTGAGAGGAACTGGATGCTTCATGAAGTCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| CDS-3UTR GCA 90 bp | GGGCATCCCAAGAATCAGGCATGGCGAGGGGGCAGCAGCGTGCAGCCTGGCCGGCGAAGCTGCTGCGCCTaGTGGCTCCCTGCTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GHPKNQAWRGGSSVQPGRRSCCA*WLPALP Trigger: AGGAAGAGCAGGGAGCCAGCAGGCGCAGCAGCTTCG...CCGGCCAGGCTGCACGCTGCTGCCCCCTCGCCATGCCTGATTCTTGGGATGCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| CDS-3UTR TCA 90 bp | GCCTGGGCATCCCAAGAATCAGGCATGGCGAGGGGGCAGCAGCGTGCAGCCTGGCACGTCGGGGTTCAGTaGCATGTACAGCAGGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: AWASQESGMARGQQRAAWHVGVQ*HVQQAP Trigger: TGGTGCCTGCTGTACATGTCACTGAACCCCGACGTG...CCAGGCTGCACGCTGCTGCCCCCTCGCCATGCCTGATTCTTGGGATGCCCAGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| CDS-3UTR CCA 90 bp | GGGCATCCCAAGAATCAGGCATGGCGAGGGGGCAGCAGCGTGCAGCCTGGCCGGACCACCACCAGACGGTaGCCGATGAAGAAGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GHPKNQAWRGGSSVQPGRTTTRR*PMKKLK Trigger: CTTCAGCTTCTTCATCGGCCACCGTCTGGTGGTGGT...CCGGCCAGGCTGCACGCTGCTGCCCCCTCGCCATGCCTGATTCTTGGGATGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| CDS-3UTR CCA 90 bp | GGGCATCCCAAGAATCAGGCATGGCGAGGGGGCAGCAGCGTGCAGCCTGGCCGGCTGGCTTCTCCCAGATaGCTGGGTCTCTGTGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: GHPKNQAWRGGSSVQPGRLASPR*LGLCVL Trigger: CAGTACACAGAGACCCAGCCATCTGGGAGAAGCCAG...CCGGCCAGGCTGCACGCTGCTGCCCCCTCGCCATGCCTGATTCTTGGGATGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| CDS-3UTR CCA 90 bp | GCCTGGGCATCCCAAGAATCAGGCATGGCGAGGGGGCAGCAGCGTGCAGCCTGGAGGACAGAAGTCGTCTaGCTTCTCCCAGATGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AWASQESGMARGQQRAAWRTEVV*LLPDGW Trigger: CCAGCCATCTGGGAGAAGCCAGACGACTTCTGTCCT...CCAGGCTGCACGCTGCTGCCCCCTCGCCATGCCTGATTCTTGGGATGCCCAGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| CDS-3UTR TCA 90 bp | GCCTGGGCATCCCAAGAATCAGGCATGGCGAGGGGGCAGCAGCGTGCAGCCTGGGAAGGTACATGTCTATaGAGTCCTGAGGGTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AWASQESGMARGQQRAAWEGTCL*SPEGCW Trigger: CCAGCAACCCTCAGGACTTCATAGACATGTACCTTC...CCAGGCTGCACGCTGCTGCCCCCTCGCCATGCCTGATTCTTGGGATGCCCAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| CDS-3UTR TCA 90 bp | GCCTGGGCATCCCAAGAATCAGGCATGGCGAGGGGGCAGCAGCGTGCAGCCTGGCAGGTAACGCAAAGGTaGAAGTCTGCATCAGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: AWASQESGMARGQQRAAWQVTQR*KSASGS Trigger: TGAGCCTGATGCAGACTTTCACCTTTGCGTTACCTG...CCAGGCTGCACGCTGCTGCCCCCTCGCCATGCCTGATTCTTGGGATGCCCAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| CDS-3UTR TCA 90 bp | GCCTGGGCATCCCAAGAATCAGGCATGGCGAGGGGGCAGCAGCGTGCAGCCTGGGCATCCAGAGACTCTTaGTGCTCTCGGATGATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: AWASQESGMARGQQRAAWASRDS*CSRMMF Trigger: AAACATCATCCGAGAGCATCAAGAGTCTCTGGATGC...CCAGGCTGCACGCTGCTGCCCCCTCGCCATGCCTGATTCTTGGGATGCCCAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| CDS-3UTR TCA 90 bp | CAGCAGGAGAGGAGGGTTCTGAGTCACTTGAGTGAGAAATCCCTTCCGGACCAACGCTGTGGAAGTCGCTaGGGACCACCACCAGACGGT | + |
|
Preference number: 4 (lower is better) Translates to: QQERRVLSHLSEKSLPDQRCGSR*GPPPDG Trigger: ACCGTCTGGTGGTGGTCCTCAGCGACTTCCACAGCG...TTGGTCCGGAAGGGATTTCTCACTCAAGTGACTCAGAACCCTCCTCTCCTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| CDS-3UTR TCA 90 bp | CAGCAGGAGAGGAGGGTTCTGAGTCACTTGAGTGAGAAATCCCTTCCGGACCAATCCGCGGGCGGTCACTaGACACTTCAGCCTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QQERRVLSHLSEKSLPDQSAGGH*TLQPAA Trigger: TGCAGCAGGCTGAAGTGTTCAGTGACCGCCCGCGGA...TTGGTCCGGAAGGGATTTCTCACTCAAGTGACTCAGAACCCTCCTCTCCTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| CDS-3UTR TCA 90 bp | AGCTTCAGGACCACGTGGGGCAATACTGAGATGGGGCTCAGAAAGTGCTCTCCATCCTGGGCTCCAGGCTaGGCTTGCCCAGACCGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SFRTTWGNTEMGLRKCSPSWAPG*ACPDRN Trigger: ATTTCGGTCTGGGCAAGCTCAGCCTGGAGCCCAGGA...TGGAGAGCACTTTCTGAGCCCCATCTCAGTATTGCCCCACGTGGTCCTGAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| CDS-3UTR CCA 90 bp | AGCACTGGAGAACCTCAGCTTCCTCAGTGTGAGGACTGCATATACACAAAAGCACCCACCGTGTCCGTCTaGCTGCCCGAGCCCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: STGEPQLPQCEDCIYTKAPTVSV*LPEPSQ Trigger: CTGGCTGGGCTCGGGCAGCCAGACGGACACGGTGGG...TGCTTTTGTGTATATGCAGTCCTCACACTGAGGAAGCTGAGGTTCTCCAGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| CDS-3UTR CCA 90 bp | GCAGGATTTCCCATTCCACACCTTATCCACAATGTGAGCATCTTTAGCCCCTCGGCCTCGCGCACGCTGTaGAAGTCGCTGAGGACCACC | + |
|
Preference number: 4 (lower is better) Translates to: AGFPIPHLIHNVSIFSPSASRTL*KSLRTT Trigger: GGTGGTCCTCAGCGACTTCCACAGCGTGCGCGAGGC...CGAGGGGCTAAAGATGCTCACATTGTGGATAAGGTGTGGAATGGGAAATCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| CDS-3UTR CCA 90 bp | GCAGGATTTCCCATTCCACACCTTATCCACAATGTGAGCATCTTTAGCCCCTCGCGAGCGGCACCACCATaGACAGCCGCTGCACCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AGFPIPHLIHNVSIFSPSRAAPP*TAAAPP Trigger: TGGAGGTGCAGCGGCTGTCCATGGTGGTGCCGCTCG...CGAGGGGCTAAAGATGCTCACATTGTGGATAAGGTGTGGAATGGGAAATCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| 3UTR CAA 72 bp | AGGGGCCTTGGGAGGTCCGAAGGCAGATCTACTGATTaGCCCAGCATCTGCCACCAGCACAGACTTCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: RGLGRSEGRSTD*PSICHQHRLHE Trigger: TTCATGAAGTCTGTGCTGGTGGCAGATGCTGGGCAAATCAGTAGATCTGCCTTCGGACCTCCCAAGGCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| CDS-3UTR TCA 90 bp | CGGAGGCCAGCTTCAGGACCACGTGGGGCAATACTGAGATGGGGCTCAGAAAGTCTTGATGCTCTCGGATaGTGTTTTTCAGGAAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RRPASGPRGAILRWGSESLDALG*CFSGSR Trigger: CCTGCTTCCTGAAAAACATCATCCGAGAGCATCAAG...ACTTTCTGAGCCCCATCTCAGTATTGCCCCACGTGGTCCTGAAGCTGGCCTCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| CDS-3UTR TCA 90 bp | CAAGGCAACTCAGTAGCAAGAACTGATTCCTTGACATTGTCCTCTGAACCCGGTTCTGGGCCTTGTCCGTaGGGGAAGGTGCACGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QGNSVARTDSLTLSSEPGSGPCP*GKVHGH Trigger: GTGACCGTGCACCTTCCCTCACGGACAAGGCCCAGA...ACCGGGTTCAGAGGACAATGTCAAGGAATCAGTTCTTGCTACTGAGTTGCCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200236.2 |
||
| CDS-3UTR TCA 90 bp | AGCTTCAGGACCACGTGGGGCAATACTGAGATGGGGCTCAGAAAGTGCTCTCCACAAATCTCCCAGTCATaGCAGGCTTCTCGGAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: SFRTTWGNTEMGLRKCSPQISQS*QASRNP Trigger: AGGGTTCCGAGAAGCCTGTCATGACTGGGAGATTTG...TGGAGAGCACTTTCTGAGCCCCATCTCAGTATTGCCCCACGTGGTCCTGAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| CDS-3UTR GCA 90 bp | CAAGGCAACTCAGTAGCAAGAACTGATTCCTTGACATTGTCCTCTGAACCCGGTCGAAGCTGCTGCGCCTaGTGGCTCCCTGCTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QGNSVARTDSLTLSSEPGRSCCA*WLPALP Trigger: AGGAAGAGCAGGGAGCCAGCAGGCGCAGCAGCTTCG...ACCGGGTTCAGAGGACAATGTCAAGGAATCAGTTCTTGCTACTGAGTTGCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200236.2 |
||
| CDS-3UTR GCA 90 bp | AACATACTGGGCAAGGGGACATTTCATCCTAGCTCTATAAAAGGGACACATCCCCCTCGTCGAAGCTGCTaGGCCTGCTGGCTCCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NILGKGTFHPSSIKGTHPPRRSC*ACWLPA Trigger: AGCAGGGAGCCAGCAGGCGCAGCAGCTTCGACGAGG...GGGATGTGTCCCTTTTATAGAGCTAGGATGAAATGTCCCCTTGCCCAGTATGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| 3UTR CAA 72 bp | CTGATGGCACAGCAGGAGAGGAGGGTTCTGAGTCACTaGAGTGAGAAATCCCTTCCGGACCAATCCCACAAC | + |
|
Preference number: 4 (lower is better) Translates to: LMAQQERRVLSH*SEKSLPDQSHN Trigger: GTTGTGGGATTGGTCCGGAAGGGATTTCTCACTCAAGTGACTCAGAACCCTCCTCTCCTGCTGTGCCATCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| CDS-3UTR TCA 90 bp | CAAGGCAACTCAGTAGCAAGAACTGATTCCTTGACATTGTCCTCTGAACCCGGTGCCGCTGCACCTCCATaGTGGTGGCCTCTGTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: QGNSVARTDSLTLSSEPGAAAPP*WWPLCM Trigger: CATACACAGAGGCCACCATCATGGAGGTGCAGCGGC...ACCGGGTTCAGAGGACAATGTCAAGGAATCAGTTCTTGCTACTGAGTTGCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200236.2 |
||
| CDS-3UTR GCA 90 bp | CAAGGCAACTCAGTAGCAAGAACTGATTCCTTGACATTGTCCTCTGAACCCGGTCTGAACACTTCAGCCTaGTGCACTAGCGCCTCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: QGNSVARTDSLTLSSEPGLNTSA*CTSASR Trigger: GCGCGAGGCGCTAGTGCAGCAGGCTGAAGTGTTCAG...ACCGGGTTCAGAGGACAATGTCAAGGAATCAGTTCTTGCTACTGAGTTGCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200236.2 |
||
| CDS-3UTR CCA 90 bp | AGCTTCAGGACCACGTGGGGCAATACTGAGATGGGGCTCAGAAAGTGCTCTCCAAGTCCTGAGGGTTGCTaGCATCCAGAGACTCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SFRTTWGNTEMGLRKCSPSPEGC*HPETLD Trigger: ATCAAGAGTCTCTGGATGCCAGCAACCCTCAGGACT...TGGAGAGCACTTTCTGAGCCCCATCTCAGTATTGCCCCACGTGGTCCTGAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| CDS-3UTR TCA 90 bp | CAAACAAAAAGGTTGGGTCAGCAAGGCAACTCAGTAGCAAGAACTGATTCCTTGCGCTGTGGAAGTCGCTaGGGACCACCACCAGACGGT | + |
|
Preference number: 4 (lower is better) Translates to: QTKRLGQQGNSVARTDSLRCGSR*GPPPDG Trigger: ACCGTCTGGTGGTGGTCCTCAGCGACTTCCACAGCG...CAAGGAATCAGTTCTTGCTACTGAGTTGCCTTGCTGACCCAACCTTTTTGTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200236.2 |
||
| CDS-3UTR TCA 90 bp | GAGGGCCCTCTAATCACGCAATGGCTTCTTGTCTTGAAGAGTAAGTCAGTCATAGCCGCTGCACCTCCATaGTGGTGGCCTCTGTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: EGPLITQWLLVLKSKSVIAAAPP*WWPLCM Trigger: CATACACAGAGGCCACCATCATGGAGGTGCAGCGGC...TATGACTGACTTACTCTTCAAGACAAGAAGCCATTGCGTGATTAGAGGGCCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| CDS-3UTR GCA 90 bp | AACATACTGGGCAAGGGGACATTTCATCCTAGCTCTATAAAAGGGACACATCCCCTGAACACTTCAGCCTaGTGCACTAGCGCCTCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: NILGKGTFHPSSIKGTHPLNTSA*CTSASR Trigger: GCGCGAGGCGCTAGTGCAGCAGGCTGAAGTGTTCAG...GGGATGTGTCCCTTTTATAGAGCTAGGATGAAATGTCCCCTTGCCCAGTATGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| CDS-3UTR GCA 90 bp | AGCACTGGAGAACCTCAGCTTCCTCAGTGTGAGGACTGCATATACACAAAAGCAGTCCGTGAGGGAAGGTaGACGGTCACAGCCAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: STGEPQLPQCEDCIYTKAVREGR*TVTAND Trigger: GTCATTGGCTGTGACCGTGCACCTTCCCTCACGGAC...TGCTTTTGTGTATATGCAGTCCTCACACTGAGGAAGCTGAGGTTCTCCAGTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| CDS-3UTR CCA 90 bp | CAAGGCAACTCAGTAGCAAGAACTGATTCCTTGACATTGTCCTCTGAACCCGGTAGGTCATGTGAGGAATaGCGAGCGGCACCACCATGG | + |
|
Preference number: 4 (lower is better) Translates to: QGNSVARTDSLTLSSEPGRSCEE*RAAPPW Trigger: CCATGGTGGTGCCGCTCGCCATTCCTCACATGACCT...ACCGGGTTCAGAGGACAATGTCAAGGAATCAGTTCTTGCTACTGAGTTGCCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200236.2 |
||
| CDS-3UTR TCA 90 bp | AAACAAACAAAAAGGTTGGGTCAGCAAGGCAACTCAGTAGCAAGAACTGATTCCTCCGCGGGCGGTCACTaGACACTTCAGCCTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KQTKRLGQQGNSVARTDSSAGGH*TLQPAA Trigger: TGCAGCAGGCTGAAGTGTTCAGTGACCGCCCGCGGA...GGAATCAGTTCTTGCTACTGAGTTGCCTTGCTGACCCAACCTTTTTGTTTGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200236.2 |
||
| CDS-3UTR TCA 90 bp | AGCTTCAGGACCACGTGGGGCAATACTGAGATGGGGCTCAGAAAGTGCTCTCCACACGGTCACAGCCAATaGCCCTTTCAATTTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SFRTTWGNTEMGLRKCSPHGHSQ*PFQFLH Trigger: ATGAAGAAATTGAAAGGGTCATTGGCTGTGACCGTG...TGGAGAGCACTTTCTGAGCCCCATCTCAGTATTGCCCCACGTGGTCCTGAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| CDS-3UTR TCA 90 bp | TTACTCATATTAGGTTTTTATTTAGCGGCTGTTACCTTCCCTCAGGAAGCAGCTTCTGGGCCTTGTCCGTaGGGGAAGGTGCACGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLILGFYLAAVTFPQEAASGPCP*GKVHGH Trigger: GTGACCGTGCACCTTCCCTCACGGACAAGGCCCAGA...AGCTGCTTCCTGAGGGAAGGTAACAGCCGCTAAATAAAAACCTAATATGAGTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| CDS-3UTR GCA 90 bp | AAACAAACAAAAAGGTTGGGTCAGCAAGGCAACTCAGTAGCAAGAACTGATTCCAACACTTCAGCCTGCTaGACTAGCGCCTCGCGCACG | + |
|
Preference number: 4 (lower is better) Translates to: KQTKRLGQQGNSVARTDSNTSAC*TSASRT Trigger: CGTGCGCGAGGCGCTAGTGCAGCAGGCTGAAGTGTT...GGAATCAGTTCTTGCTACTGAGTTGCCTTGCTGACCCAACCTTTTTGTTTGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200236.2 |
||
| CDS-3UTR GCA 90 bp | CAAACAAAAAGGTTGGGTCAGCAAGGCAACTCAGTAGCAAGAACTGATTCCTTGGTCCGTGAGGGAAGGTaGACGGTCACAGCCAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: QTKRLGQQGNSVARTDSLVREGR*TVTAND Trigger: GTCATTGGCTGTGACCGTGCACCTTCCCTCACGGAC...CAAGGAATCAGTTCTTGCTACTGAGTTGCCTTGCTGACCCAACCTTTTTGTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200236.2 |
||
| CDS-3UTR CCA 90 bp | TTATTTGAAACAAACAAACAAACAAAAAGGTTGGGTCAGCAAGGCAACTCAGTACCCACCGTGTCCGTCTaGCTGCCCGAGCCCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LFETNKQTKRLGQQGNSVPTVSV*LPEPSQ Trigger: CTGGCTGGGCTCGGGCAGCCAGACGGACACGGTGGG...TACTGAGTTGCCTTGCTGACCCAACCTTTTTGTTTGTTTGTTTGTTTCAAATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200236.2 |
||
| CDS-3UTR CCA 90 bp | TTTGAAACAAACAAACAAACAAAAAGGTTGGGTCAGCAAGGCAACTCAGTAGCACGAGCGGCACCACCATaGACAGCCGCTGCACCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FETNKQTKRLGQQGNSVARAAPP*TAAAPP Trigger: TGGAGGTGCAGCGGCTGTCCATGGTGGTGCCGCTCG...TGCTACTGAGTTGCCTTGCTGACCCAACCTTTTTGTTTGTTTGTTTGTTTCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200236.2 |
||
| 3UTR CAA 72 bp | CTCAGAAAGTGCTCTCCAGTCACAAGGCCAAGTAGCTaGGAGACCCGGTGGGTGATGGCACTTTTTAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRKCSPVTRPSS*ETRWVMALFNS Trigger: AGAATTAAAAAGTGCCATCACCCACCGGGTCTCCAAGCTACTTGGCCTTGTGACTGGAGAGCACTTTCTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| 3UTR CAA 72 bp | GGTCAGCAAGGCAACTCAGTAGCAAGAACTGATTCCTaGACATTGTCCTCTGAACCCGGTACCTACACTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GQQGNSVARTDS*TLSSEPGTYTH Trigger: GTGAGTGTAGGTACCGGGTTCAGAGGACAATGTCAAGGAATCAGTTCTTGCTACTGAGTTGCCTTGCTGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200236.2 |
||
| CDS-3UTR TCA 90 bp | AAACAAACAAAAAGGTTGGGTCAGCAAGGCAACTCAGTAGCAAGAACTGATTCCCACGTCGGGGTTCAGTaGCATGTACAGCAGGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: KQTKRLGQQGNSVARTDSHVGVQ*HVQQAP Trigger: TGGTGCCTGCTGTACATGTCACTGAACCCCGACGTG...GGAATCAGTTCTTGCTACTGAGTTGCCTTGCTGACCCAACCTTTTTGTTTGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200236.2 |
||
| CDS-3UTR GCA 90 bp | TTACTCATATTAGGTTTTTATTTAGCGGCTGTTACCTTCCCTCAGGAAGCAGCTAACACTTCAGCCTGCTaGACTAGCGCCTCGCGCACG | + |
|
Preference number: 4 (lower is better) Translates to: LLILGFYLAAVTFPQEAANTSAC*TSASRT Trigger: CGTGCGCGAGGCGCTAGTGCAGCAGGCTGAAGTGTT...AGCTGCTTCCTGAGGGAAGGTAACAGCCGCTAAATAAAAACCTAATATGAGTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| CDS-3UTR GCA 90 bp | AGTATTCAGTATTCTAAGAAAGGCTCAGCATCACCATGGTTCCTTCACGGTTCTTCCATCTTGGCCAGCTaGTCTCCCATACACACCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SIQYSKKGSASPWFLHGSSILAS*SPIHTR Trigger: GCGGGTGTGTATGGGAGAGCAGCTGGCCAAGATGGA...AGAACCGTGAAGGAACCATGGTGATGCTGAGCCTTTCTTAGAATACTGAATACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| CDS-3UTR CCA 90 bp | CAAACAAAAAGGTTGGGTCAGCAAGGCAACTCAGTAGCAAGAACTGATTCCTTGACCACCACCAGACGGTaGCCGATGAAGAAGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QTKRLGQQGNSVARTDSLTTTRR*PMKKLK Trigger: CTTCAGCTTCTTCATCGGCCACCGTCTGGTGGTGGT...CAAGGAATCAGTTCTTGCTACTGAGTTGCCTTGCTGACCCAACCTTTTTGTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200236.2 |
||
| CDS-3UTR CCA 90 bp | AGCACTGGAGAACCTCAGCTTCCTCAGTGTGAGGACTGCATATACACAAAAGCATTGATCAGGAAGAGCTaGCTGTGCAGGCAGATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: STGEPQLPQCEDCIYTKALIRKS*LCRQIS Trigger: GGAAATCTGCCTGCACAGCCAGCTCTTCCTGATCAA...TGCTTTTGTGTATATGCAGTCCTCACACTGAGGAAGCTGAGGTTCTCCAGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| CDS-3UTR TCA 90 bp | GAGGGCCCTCTAATCACGCAATGGCTTCTTGTCTTGAAGAGTAAGTCAGTCATAGTACTGACCACAGGTTaGTTAGGACCACTGTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: EGPLITQWLLVLKSKSVIVLTTG*LGPLCL Trigger: AAGGCACAGTGGTCCTAATCAACCTGTGGTCAGTAC...TATGACTGACTTACTCTTCAAGACAAGAAGCCATTGCGTGATTAGAGGGCCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| CDS-3UTR TCA 90 bp | TTGGGTCAGCAAGGCAACTCAGTAGCAAGAACTGATTCCTTGACATTGTCCTCTGTACTGACCACAGGTTaGTTAGGACCACTGTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LGQQGNSVARTDSLTLSSVLTTG*LGPLCL Trigger: AAGGCACAGTGGTCCTAATCAACCTGTGGTCAGTAC...AGAGGACAATGTCAAGGAATCAGTTCTTGCTACTGAGTTGCCTTGCTGACCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200236.2 |
||
| CDS-3UTR GCA 90 bp | TTATTTGAAACAAACAAACAAACAAAAAGGTTGGGTCAGCAAGGCAACTCAGTACCTCGTCGAAGCTGCTaGGCCTGCTGGCTCCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LFETNKQTKRLGQQGNSVPRRSC*ACWLPA Trigger: AGCAGGGAGCCAGCAGGCGCAGCAGCTTCGACGAGG...TACTGAGTTGCCTTGCTGACCCAACCTTTTTGTTTGTTTGTTTGTTTCAAATAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200236.2 |
||
| CDS-3UTR GCA 90 bp | AGCACTGGAGAACCTCAGCTTCCTCAGTGTGAGGACTGCATATACACAAAAGCAGCAAAGGTGAAAGTCTaGATCAGGCTCACGAACATC | + |
|
Preference number: 4 (lower is better) Translates to: STGEPQLPQCEDCIYTKAAKVKV*IRLTNI Trigger: GATGTTCGTGAGCCTGATGCAGACTTTCACCTTTGC...TGCTTTTGTGTATATGCAGTCCTCACACTGAGGAAGCTGAGGTTCTCCAGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| CDS-3UTR CCA 90 bp | TTACTCATATTAGGTTTTTATTTAGCGGCTGTTACCTTCCCTCAGGAAGCAGCTAGGTCATGTGAGGAATaGCGAGCGGCACCACCATGG | + |
|
Preference number: 4 (lower is better) Translates to: LLILGFYLAAVTFPQEAARSCEE*RAAPPW Trigger: CCATGGTGGTGCCGCTCGCCATTCCTCACATGACCT...AGCTGCTTCCTGAGGGAAGGTAACAGCCGCTAAATAAAAACCTAATATGAGTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| CDS-3UTR CCA 90 bp | AAACAAACAAAAAGGTTGGGTCAGCAAGGCAACTCAGTAGCAAGAACTGATTCCAGGACAGAAGTCGTCTaGCTTCTCCCAGATGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KQTKRLGQQGNSVARTDSRTEVV*LLPDGW Trigger: CCAGCCATCTGGGAGAAGCCAGACGACTTCTGTCCT...GGAATCAGTTCTTGCTACTGAGTTGCCTTGCTGACCCAACCTTTTTGTTTGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200236.2 |
||
| CDS-3UTR TCA 90 bp | TTGGGTCAGCAAGGCAACTCAGTAGCAAGAACTGATTCCTTGACATTGTCCTCTGCATCCAGAGACTCTTaGTGCTCTCGGATGATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LGQQGNSVARTDSLTLSSASRDS*CSRMMF Trigger: AAACATCATCCGAGAGCATCAAGAGTCTCTGGATGC...AGAGGACAATGTCAAGGAATCAGTTCTTGCTACTGAGTTGCCTTGCTGACCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200236.2 |
||
| CDS-3UTR CCA 90 bp | CAAACAAAAAGGTTGGGTCAGCAAGGCAACTCAGTAGCAAGAACTGATTCCTTGAGTCCTGAGGGTTGCTaGCATCCAGAGACTCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: QTKRLGQQGNSVARTDSLSPEGC*HPETLD Trigger: ATCAAGAGTCTCTGGATGCCAGCAACCCTCAGGACT...CAAGGAATCAGTTCTTGCTACTGAGTTGCCTTGCTGACCCAACCTTTTTGTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200236.2 |
||
| 3UTR CAA 72 bp | CAAGGCAACTCAGTAGCAAGAACTGATTCCTTGACATaGTCCTCTGAACCCGGTACCTACACTCACACATAC | + |
|
Preference number: 4 (lower is better) Translates to: QGNSVARTDSLT*SSEPGTYTHTY Trigger: GTATGTGTGAGTGTAGGTACCGGGTTCAGAGGACAATGTCAAGGAATCAGTTCTTGCTACTGAGTTGCCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200236.2 |
||
| CDS-3UTR GCA 90 bp | AACATACTGGGCAAGGGGACATTTCATCCTAGCTCTATAAAAGGGACACATCCCTGCTCTTCCTCCATGTaGAGAAGGTACATGTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: NILGKGTFHPSSIKGTHPCSSSM*RRYMSM Trigger: CATAGACATGTACCTTCTGCACATGGAGGAAGAGCA...GGGATGTGTCCCTTTTATAGAGCTAGGATGAAATGTCCCCTTGCCCAGTATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| CDS-3UTR CCA 90 bp | AGTATTCAGTATTCTAAGAAAGGCTCAGCATCACCATGGTTCCTTCACGGTTCTCCCCGTGCTTCTGCATaGCTTCTTTCACGTATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SIQYSKKGSASPWFLHGSPRASA*LLSRMQ Trigger: TTGCATACGTGAAAGAAGCCATGCAGAAGCACGGGG...AGAACCGTGAAGGAACCATGGTGATGCTGAGCCTTTCTTAGAATACTGAATACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| CDS-3UTR CCA 90 bp | AAACAAACAAAAAGGTTGGGTCAGCAAGGCAACTCAGTAGCAAGAACTGATTCCCCCCGTGCTTCTGCATaGCTTCTTTCACGTATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KQTKRLGQQGNSVARTDSPRASA*LLSRMQ Trigger: TTGCATACGTGAAAGAAGCCATGCAGAAGCACGGGG...GGAATCAGTTCTTGCTACTGAGTTGCCTTGCTGACCCAACCTTTTTGTTTGTTT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000200236.2 |
||
| CDS-3UTR TCA 90 bp | TTTGAAACAAACAAACAAACAAAAAGGTTGGGTCAGCAAGGCAACTCAGTAGCAGAAGGTACATGTCTATaGAGTCCTGAGGGTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FETNKQTKRLGQQGNSVAEGTCL*SPEGCW Trigger: CCAGCAACCCTCAGGACTTCATAGACATGTACCTTC...TGCTACTGAGTTGCCTTGCTGACCCAACCTTTTTGTTTGTTTGTTTGTTTCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200236.2 |
||
| CDS-3UTR TCA 90 bp | AAACAAACAAAAAGGTTGGGTCAGCAAGGCAACTCAGTAGCAAGAACTGATTCCCACGGTCACAGCCAATaGCCCTTTCAATTTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KQTKRLGQQGNSVARTDSHGHSQ*PFQFLH Trigger: ATGAAGAAATTGAAAGGGTCATTGGCTGTGACCGTG...GGAATCAGTTCTTGCTACTGAGTTGCCTTGCTGACCCAACCTTTTTGTTTGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200236.2 |
||
| CDS-3UTR CCA 90 bp | TTATTTGAAACAAACAAACAAACAAAAAGGTTGGGTCAGCAAGGCAACTCAGTACTGGCTTCTCCCAGATaGCTGGGTCTCTGTGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: LFETNKQTKRLGQQGNSVLASPR*LGLCVL Trigger: CAGTACACAGAGACCCAGCCATCTGGGAGAAGCCAG...TACTGAGTTGCCTTGCTGACCCAACCTTTTTGTTTGTTTGTTTGTTTCAAATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200236.2 |
||
| 3UTR CAA 72 bp | AAGGCGGAAGTCCTTTTCAAGTACGATGTGAAATCTTaGGTTAGGAGGTCCAGAAATCCATGTGCAAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KAEVLFKYDVKS*VRRSRNPCASH Trigger: ATGACTTGCACATGGATTTCTGGACCTCCTAACCAAAGATTTCACATCGTACTTGAAAAGGACTTCCGCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| CDS-3UTR TCA 90 bp | TTTGAAACAAACAAACAAACAAAAAGGTTGGGTCAGCAAGGCAACTCAGTAGCACTTGATGCTCTCGGATaGTGTTTTTCAGGAAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FETNKQTKRLGQQGNSVALDALG*CFSGSR Trigger: CCTGCTTCCTGAAAAACATCATCCGAGAGCATCAAG...TGCTACTGAGTTGCCTTGCTGACCCAACCTTTTTGTTTGTTTGTTTGTTTCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000200236.2 |
||
| CDS-3UTR CCA 90 bp | TTATTTGAAACAAACAAACAAACAAAAAGGTTGGGTCAGCAAGGCAACTCAGTATTGATCAGGAAGAGCTaGCTGTGCAGGCAGATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LFETNKQTKRLGQQGNSVLIRKS*LCRQIS Trigger: GGAAATCTGCCTGCACAGCCAGCTCTTCCTGATCAA...TACTGAGTTGCCTTGCTGACCCAACCTTTTTGTTTGTTTGTTTGTTTCAAATAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200236.2 |
||
| CDS-3UTR TCA 90 bp | TTATTTGAAACAAACAAACAAACAAAAAGGTTGGGTCAGCAAGGCAACTCAGTAAAACCAAGCTTTAACTaGCCTATCCCAAAAGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: LFETNKQTKRLGQQGNSVKPSFN*PIPKGI Trigger: TATTCCTTTTGGGATAGGTCAGTTAAAGCTTGGTTT...TACTGAGTTGCCTTGCTGACCCAACCTTTTTGTTTGTTTGTTTGTTTCAAATAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000200236.2 |
||
| CDS GCA 90 bp | GCCCGAAGTTACCCACGAGTGGCCGAGGCTTGGGCCCCGGAGGGATaGCGCAGGCGCGTTGCCGCCGCAGCCAAACCCAGCCTAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: ARSYPRVAEAWAPEG*RRRVAAAAKPSLAA Trigger: TGCTGCTAGGCTGGGTTTGGCTGCGGCGGCAACGCGCCTGCGGCATCCCTCCGGGGCCCAAGCCTCGGCCACTCGTGGGTAACTTCGGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106337.7 ENSMUST00000200236.2 |
||
| CDS GCA 90 bp | GAGATGAGCGGCATCCGCGGGCGGTCACTGAACACTTCAGCCTGCTaGACTAGCGCCTCGCGCACGCTGTGGAAGTCGCTGAGGACCACC | + |
|
Preference number: 5 (lower is better) Translates to: EMSGIRGRSLNTSAC*TSASRTLWKSLRTT Trigger: GGTGGTCCTCAGCGACTTCCACAGCGTGCGCGAGGCGCTAGTGCAGCAGGCTGAAGTGTTCAGTGACCGCCCGCGGATGCCGCTCATCTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106337.7 ENSMUST00000200236.2 |
||
| CDS GCA 90 bp | ATGGAGATGAGCGGCATCCGCGGGCGGTCACTGAACACTTCAGCCTaGTGCACTAGCGCCTCGCGCACGCTGTGGAAGTCGCTGAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: MEMSGIRGRSLNTSA*CTSASRTLWKSLRT Trigger: GGTCCTCAGCGACTTCCACAGCGTGCGCGAGGCGCTAGTGCAGCAGGCTGAAGTGTTCAGTGACCGCCCGCGGATGCCGCTCATCTCCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106337.7 ENSMUST00000200236.2 |
||
| CDS-3UTR CAA 90 bp | GGGCATCCCAAGAATCAGGCATGGCGAGGGGGCAGCAGCGTGCAGCCTGGCCGGAACCAGGGGCATATGTaGATCAGGAAGAGCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GHPKNQAWRGGSSVQPGRNQGHM*IRKSWL Trigger: CAGCCAGCTCTTCCTGATCAACATATGCCCCTGGTT...CCGGCCAGGCTGCACGCTGCTGCCCCCTCGCCATGCCTGATTCTTGGGATGCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| CDS CCA 90 bp | TCACTGAACACTTCAGCCTGCTGCACTAGCGCCTCGCGCACGCTGTaGAAGTCGCTGAGGACCACCACCAGACGGTGGCCGATGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SLNTSACCTSASRTL*KSLRTTTRRWPMKK Trigger: CTTCTTCATCGGCCACCGTCTGGTGGTGGTCCTCAGCGACTTCCACAGCGTGCGCGAGGCGCTAGTGCAGCAGGCTGAAGTGTTCAGTGA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106337.7 ENSMUST00000200236.2 |
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| CDS GCA 90 bp | GCTGAAGGGGGCCTCCCCGTGCTTCTGCATGGCTTCTTTCACGTATaGAAACTCCTCGATGATCCTGGGCTCCAGGCTGAGCTTGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AEGGLPVLLHGFFHV*KLLDDPGLQAELAQ Trigger: CTGGGCAAGCTCAGCCTGGAGCCCAGGATCATCGAGGAGTTTGCATACGTGAAAGAAGCCATGCAGAAGCACGGGGAGGCCCCCTTCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106337.7 ENSMUST00000200236.2 |
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| CDS TCA 90 bp | TTGGGAATGGTGAACCCTTGGAGGACTGTTTTCTCCGAGGTCATGTaGGGAATGGCGAGCGGCACCACCATGGACAGCCGCTGCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LGMVNPWRTVFSEVM*GMASGTTMDSRCTS Trigger: GGAGGTGCAGCGGCTGTCCATGGTGGTGCCGCTCGCCATTCCTCACATGACCTCGGAGAAAACAGTCCTCCAAGGGTTCACCATTCCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106337.7 ENSMUST00000200236.2 |
||
| CDS-3UTR CAA 90 bp | CGGAGGCCAGCTTCAGGACCACGTGGGGCAATACTGAGATGGGGCTCAGAAAGTAGGGAGCAGATGATGTaGGAGACGGCATTGCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: RRPASGPRGAILRWGSESREQMM*ETALLM Trigger: CATCAGCAATGCCGTCTCCAACATCATCTGCTCCCT...ACTTTCTGAGCCCCATCTCAGTATTGCCCCACGTGGTCCTGAAGCTGGCCTCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| CDS-3UTR CAA 90 bp | AGCTGCTGGAAGCTTCCATTCTGGGTTGTCTTAGCAGCTAAGGCCTCATCCTGGTATGGCATCTGGGCCTaGTCCGTGAGGGAAGGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SCWKLPFWVVLAAKASSWYGIWA*SVREGA Trigger: TGCACCTTCCCTCACGGACAAGGCCCAGATGCCATA...CCAGGATGAGGCCTTAGCTGCTAAGACAACCCAGAATGGAAGCTTCCAGCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| CDS TCA 90 bp | TCCTCGATGATCCTGGGCTCCAGGCTGAGCTTGCCCAGACCGAAATaGCGAAGCGTCGAGTGGGAGAATCTCCTCTGCTGTTTCCAAATT | + |
|
Preference number: 5 (lower is better) Translates to: SSMILGSRLSLPRPK*RSVEWENLLCCFQI Trigger: AATTTGGAAACAGCAGAGGAGATTCTCCCACTCGACGCTTCGTCATTTCGGTCTGGGCAAGCTCAGCCTGGAGCCCAGGATCATCGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106337.7 ENSMUST00000200236.2 |
||
| CDS TCA 90 bp | TGCTGGCTCCCTGCTCTTCCTCCATGTGCAGAAGGTACATGTCTATaGAGTCCTGAGGGTTGCTGGCATCCAGAGACTCTTGATGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: CWLPALPPCAEGTCL*SPEGCWHPETLDAL Trigger: GAGAGCATCAAGAGTCTCTGGATGCCAGCAACCCTCAGGACTTCATAGACATGTACCTTCTGCACATGGAGGAAGAGCAGGGAGCCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106337.7 ENSMUST00000200236.2 |
||
| CDS-3UTR CAA 90 bp | AGCTTCAGGACCACGTGGGGCAATACTGAGATGGGGCTCAGAAAGTGCTCTCCAGGCATCCAGAGACTCTaGATGCTCTCGGATGATGTT | + |
|
Preference number: 5 (lower is better) Translates to: SFRTTWGNTEMGLRKCSPGIQRL*MLSDDV Trigger: AACATCATCCGAGAGCATCAAGAGTCTCTGGATGCC...TGGAGAGCACTTTCTGAGCCCCATCTCAGTATTGCCCCACGTGGTCCTGAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| CDS-3UTR CAA 90 bp | CAAGGCAACTCAGTAGCAAGAACTGATTCCTTGACATTGTCCTCTGAACCCGGTTATGGCATCTGGGCCTaGTCCGTGAGGGAAGGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: QGNSVARTDSLTLSSEPGYGIWA*SVREGA Trigger: TGCACCTTCCCTCACGGACAAGGCCCAGATGCCATA...ACCGGGTTCAGAGGACAATGTCAAGGAATCAGTTCTTGCTACTGAGTTGCCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200236.2 |
||
| CDS GCA 90 bp | CGAGTGGGAGAATCTCCTCTGCTGTTTCCAAATTGGACCATAGTGTaGAAACACGATTCCCTTCTCCTTGGTCATGATGGAGATGAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RVGESPLLFPNWTIV*KHDSLLLGHDGDER Trigger: CCGCTCATCTCCATCATGACCAAGGAGAAGGGAATCGTGTTTGCACACTATGGTCCAATTTGGAAACAGCAGAGGAGATTCTCCCACTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106337.7 ENSMUST00000200236.2 |
||
| CDS-3UTR CAA 90 bp | TTGGGTCAGCAAGGCAACTCAGTAGCAAGAACTGATTCCTTGACATTGTCCTCTAGGACCACTGTGCCTTaGGGAATGGTGAACCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LGQQGNSVARTDSLTLSSRTTVP*GMVNPW Trigger: CCAAGGGTTCACCATTCCCAAAGGCACAGTGGTCCT...AGAGGACAATGTCAAGGAATCAGTTCTTGCTACTGAGTTGCCTTGCTGACCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200236.2 |
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| CDS-3UTR CAA 90 bp | GCAGGATTTCCCATTCCACACCTTATCCACAATGTGAGCATCTTTAGCCCCTCGAGGAATAACTCCATCTaGGCCAGCTGCTCTCCCATA | + |
|
Preference number: 5 (lower is better) Translates to: AGFPIPHLIHNVSIFSPSRNNSI*ASCSPI Trigger: TATGGGAGAGCAGCTGGCCAAGATGGAGTTATTCCT...CGAGGGGCTAAAGATGCTCACATTGTGGATAAGGTGTGGAATGGGAAATCCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| CDS-3UTR CAA 90 bp | AGCTTCAGGACCACGTGGGGCAATACTGAGATGGGGCTCAGAAAGTGCTCTCCATTTCAAAAGTTGTCCTaGGTCATCCAGAAATCGATG | + |
|
Preference number: 5 (lower is better) Translates to: SFRTTWGNTEMGLRKCSPFQKLS*VIQKSM Trigger: CATCGATTTCTGGATGACCAAGGACAACTTTTGAAA...TGGAGAGCACTTTCTGAGCCCCATCTCAGTATTGCCCCACGTGGTCCTGAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| CDS TCA 90 bp | AGTCCTGAGGGTTGCTGGCATCCAGAGACTCTTGATGCTCTCGGATaGTGTTTTTCAGGAAGCAGGATATGTCCCTTTCGATTTGCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: SPEGCWHPETLDALG*CFSGSRICPFRFAL Trigger: TAAGGCAAATCGAAAGGGACATATCCTGCTTCCTGAAAAACATCATCCGAGAGCATCAAGAGTCTCTGGATGCCAGCAACCCTCAGGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106337.7 ENSMUST00000200236.2 |
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| CDS CCA 90 bp | ATGACGAAGCGTCGAGTGGGAGAATCTCCTCTGCTGTTTCCAAATTaGACCATAGTGTGCAAACACGATTCCCTTCTCCTTGGTCATGAT | + |
|
Preference number: 5 (lower is better) Translates to: MTKRRVGESPLLFPN*TIVCKHDSLLLGHD Trigger: ATCATGACCAAGGAGAAGGGAATCGTGTTTGCACACTATGGTCCAATTTGGAAACAGCAGAGGAGATTCTCCCACTCGACGCTTCGTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106337.7 ENSMUST00000200236.2 |
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| CDS-3UTR CAA 90 bp | CAAACAAAAAGGTTGGGTCAGCAAGGCAACTCAGTAGCAAGAACTGATTCCTTGAGGGAGCAGATGATGTaGGAGACGGCATTGCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: QTKRLGQQGNSVARTDSLREQMM*ETALLM Trigger: CATCAGCAATGCCGTCTCCAACATCATCTGCTCCCT...CAAGGAATCAGTTCTTGCTACTGAGTTGCCTTGCTGACCCAACCTTTTTGTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200236.2 |
||
| CDS-3UTR CAA 90 bp | AAACAAACAAAAAGGTTGGGTCAGCAAGGCAACTCAGTAGCAAGAACTGATTCCAACCAGGGGCATATGTaGATCAGGAAGAGCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KQTKRLGQQGNSVARTDSNQGHM*IRKSWL Trigger: CAGCCAGCTCTTCCTGATCAACATATGCCCCTGGTT...GGAATCAGTTCTTGCTACTGAGTTGCCTTGCTGACCCAACCTTTTTGTTTGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200236.2 |
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| CDS-3UTR CAA 90 bp | TTACTCATATTAGGTTTTTATTTAGCGGCTGTTACCTTCCCTCAGGAAGCAGCTAGGACCACTGTGCCTTaGGGAATGGTGAACCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLILGFYLAAVTFPQEAARTTVP*GMVNPW Trigger: CCAAGGGTTCACCATTCCCAAAGGCACAGTGGTCCT...AGCTGCTTCCTGAGGGAAGGTAACAGCCGCTAAATAAAAACCTAATATGAGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| CDS-3UTR CAA 90 bp | TTACTCATATTAGGTTTTTATTTAGCGGCTGTTACCTTCCCTCAGGAAGCAGCTTGTACTGACCACAGGTaGATTAGGACCACTGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LLILGFYLAAVTFPQEAACTDHR*IRTTVP Trigger: AGGCACAGTGGTCCTAATCAACCTGTGGTCAGTACA...AGCTGCTTCCTGAGGGAAGGTAACAGCCGCTAAATAAAAACCTAATATGAGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| CDS-3UTR CAA 90 bp | GCAGGATTTCCCATTCCACACCTTATCCACAATGTGAGCATCTTTAGCCCCTCGTTCTCTTTTCAAAAGTaGTCCTTGGTCATCCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: AGFPIPHLIHNVSIFSPSFSFQK*SLVIQK Trigger: TTTCTGGATGACCAAGGACAACTTTTGAAAAGAGAA...CGAGGGGCTAAAGATGCTCACATTGTGGATAAGGTGTGGAATGGGAAATCCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
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| CDS-3UTR CAA 90 bp | TTTGAAACAAACAAACAAACAAAAAGGTTGGGTCAGCAAGGCAACTCAGTAGCATGTACTGACCACAGGTaGATTAGGACCACTGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: FETNKQTKRLGQQGNSVACTDHR*IRTTVP Trigger: AGGCACAGTGGTCCTAATCAACCTGTGGTCAGTACA...TGCTACTGAGTTGCCTTGCTGACCCAACCTTTTTGTTTGTTTGTTTGTTTCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200236.2 |
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| CDS-3UTR CAA 90 bp | TTATTTGAAACAAACAAACAAACAAAAAGGTTGGGTCAGCAAGGCAACTCAGTATTTCAAAAGTTGTCCTaGGTCATCCAGAAATCGATG | + |
|
Preference number: 5 (lower is better) Translates to: LFETNKQTKRLGQQGNSVFQKLS*VIQKSM Trigger: CATCGATTTCTGGATGACCAAGGACAACTTTTGAAA...TACTGAGTTGCCTTGCTGACCCAACCTTTTTGTTTGTTTGTTTGTTTCAAATAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200236.2 |
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| CDS-3UTR CAA 90 bp | TTATTTGAAACAAACAAACAAACAAAAAGGTTGGGTCAGCAAGGCAACTCAGTATTCTCTTTTCAAAAGTaGTCCTTGGTCATCCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LFETNKQTKRLGQQGNSVFSFQK*SLVIQK Trigger: TTTCTGGATGACCAAGGACAACTTTTGAAAAGAGAA...TACTGAGTTGCCTTGCTGACCCAACCTTTTTGTTTGTTTGTTTGTTTCAAATAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000200236.2 |
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| CDS GCA 72 bp | TACCCACGAGTGGCCGAGGCTTGGGCCCCGGAGGGATaGCGCAGGCGCGTTGCCGCCGCAGCCAAACCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: YPRVAEAWAPEG*RRRVAAAAKPS Trigger: GCTGGGTTTGGCTGCGGCGGCAACGCGCCTGCGGCATCCCTCCGGGGCCCAAGCCTCGGCCACTCGTGGGTA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106337.7 ENSMUST00000200236.2 |
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| CDS GCA 72 bp | GGCATCCGCGGGCGGTCACTGAACACTTCAGCCTGCTaGACTAGCGCCTCGCGCACGCTGTGGAAGTCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GIRGRSLNTSAC*TSASRTLWKSL Trigger: CAGCGACTTCCACAGCGTGCGCGAGGCGCTAGTGCAGCAGGCTGAAGTGTTCAGTGACCGCCCGCGGATGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106337.7 ENSMUST00000200236.2 |
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| CDS GCA 72 bp | AGCGGCATCCGCGGGCGGTCACTGAACACTTCAGCCTaGTGCACTAGCGCCTCGCGCACGCTGTGGAAGTCG | + |
|
Preference number: 6 (lower is better) Translates to: SGIRGRSLNTSA*CTSASRTLWKS Trigger: CGACTTCCACAGCGTGCGCGAGGCGCTAGTGCAGCAGGCTGAAGTGTTCAGTGACCGCCCGCGGATGCCGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106337.7 ENSMUST00000200236.2 |
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| CDS CCA 72 bp | CTGGCCAGGTACACATGCTGGCCCACCGTGTCCGTCTaGCTGCCCGAGCCCAGCCAGAACTGCGGTCGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: LARYTCWPTVSV*LPEPSQNCGRR Trigger: TCTACGACCGCAGTTCTGGCTGGGCTCGGGCAGCCAGACGGACACGGTGGGCCAGCATGTGTACCTGGCCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106337.7 ENSMUST00000200236.2 |
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| CDS CCA 72 bp | ACTTCAGCCTGCTGCACTAGCGCCTCGCGCACGCTGTaGAAGTCGCTGAGGACCACCACCAGACGGTGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: TSACCTSASRTL*KSLRTTTRRWP Trigger: CGGCCACCGTCTGGTGGTGGTCCTCAGCGACTTCCACAGCGTGCGCGAGGCGCTAGTGCAGCAGGCTGAAGT 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106337.7 ENSMUST00000200236.2 |
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| CDS TCA 72 bp | CGAGCGGCACCACCATGGACAGCCGCTGCACCTCCATaGTGGTGGCCTCTGTGTATGGCATCTGGGCCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: RAAPPWTAAAPP*WWPLCMASGPC Trigger: ACAAGGCCCAGATGCCATACACAGAGGCCACCATCATGGAGGTGCAGCGGCTGTCCATGGTGGTGCCGCTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106337.7 ENSMUST00000200236.2 |
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| CDS TCA 72 bp | GTGAACCCTTGGAGGACTGTTTTCTCCGAGGTCATGTaGGGAATGGCGAGCGGCACCACCATGGACAGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: VNPWRTVFSEVM*GMASGTTMDSR Trigger: GCGGCTGTCCATGGTGGTGCCGCTCGCCATTCCTCACATGACCTCGGAGAAAACAGTCCTCCAAGGGTTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106337.7 ENSMUST00000200236.2 |
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| CDS CCA 72 bp | CTTGGAGGACTGTTTTCTCCGAGGTCATGTGAGGAATaGCGAGCGGCACCACCATGGACAGCCGCTGCACCT | + |
|
Preference number: 6 (lower is better) Translates to: LGGLFSPRSCEE*RAAPPWTAAAP Trigger: AGGTGCAGCGGCTGTCCATGGTGGTGCCGCTCGCCATTCCTCACATGACCTCGGAGAAAACAGTCCTCCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106337.7 ENSMUST00000200236.2 |
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| CDS CAA 90 bp | CGCTGCACCTCCATGATGGTGGCCTCTGTGTATGGCATCTGGGCCTaGTCCGTGAGGGAAGGTGCACGGTCACAGCCAATGACCCTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: RCTSMMVASVYGIWA*SVREGARSQPMTLS Trigger: TGAAAGGGTCATTGGCTGTGACCGTGCACCTTCCCTCACGGACAAGGCCCAGATGCCATACACAGAGGCCACCATCATGGAGGTGCAGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106337.7 ENSMUST00000200236.2 |
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| CDS CAA 90 bp | ACGTCGGGGTTCAGTGACATGTACAGCAGGCACCAGAGCAGAGAGTaGGTCGTGGTGTCAGTGCCGGCGATGAAGAGGTCCCCAATGATG | + |
|
Preference number: 6 (lower is better) Translates to: TSGFSDMYSRHQSRE*VVVSVPAMKRSPMM Trigger: CATCATTGGGGACCTCTTCATCGCCGGCACTGACACCACGACCAACTCTCTGCTCTGGTGCCTGCTGTACATGTCACTGAACCCCGACGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106337.7 ENSMUST00000200236.2 |
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| CDS TCA 72 bp | ATCCTGGGCTCCAGGCTGAGCTTGCCCAGACCGAAATaGCGAAGCGTCGAGTGGGAGAATCTCCTCTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: ILGSRLSLPRPK*RSVEWENLLCC Trigger: ACAGCAGAGGAGATTCTCCCACTCGACGCTTCGTCATTTCGGTCTGGGCAAGCTCAGCCTGGAGCCCAGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106337.7 ENSMUST00000200236.2 |
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| CDS GCA 72 bp | GGCCTCCCCGTGCTTCTGCATGGCTTCTTTCACGTATaGAAACTCCTCGATGATCCTGGGCTCCAGGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: GLPVLLHGFFHV*KLLDDPGLQAE Trigger: CTCAGCCTGGAGCCCAGGATCATCGAGGAGTTTGCATACGTGAAAGAAGCCATGCAGAAGCACGGGGAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106337.7 ENSMUST00000200236.2 |
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| CDS CAA 72 bp | TCGAAGCGCTGGCCGAAGCACAGGGAGCAGATGATGTaGGAGACGGCATTGCTGATGATTGGGAAGGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SKRWPKHREQMM*ETALLMIGKGL Trigger: CAGCCCCTTCCCAATCATCAGCAATGCCGTCTCCAACATCATCTGCTCCCTGTGCTTCGGCCAGCGCTTCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106337.7 ENSMUST00000200236.2 |
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| CDS CAA 72 bp | TTCAGTGACATGTACAGCAGGCACCAGAGCAGAGAGTaGGTCGTGGTGTCAGTGCCGGCGATGAAGAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: FSDMYSRHQSRE*VVVSVPAMKRS Trigger: GGACCTCTTCATCGCCGGCACTGACACCACGACCAACTCTCTGCTCTGGTGCCTGCTGTACATGTCACTGAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106337.7 ENSMUST00000200236.2 |
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| CDS CAA 90 bp | TCTGGCTTCTCCCAGATGGCTGGGTCTCTGTGTACTGACCACAGGTaGATTAGGACCACTGTGCCTTTGGGAATGGTGAACCCTTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SGFSQMAGSLCTDHR*IRTTVPLGMVNPWR Trigger: CCTCCAAGGGTTCACCATTCCCAAAGGCACAGTGGTCCTAATCAACCTGTGGTCAGTACACAGAGACCCAGCCATCTGGGAGAAGCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106337.7 ENSMUST00000200236.2 |
||
| CDS GCA 72 bp | TGTGTATGGCATCTGGGCCTTGTCCGTGAGGGAAGGTaGACGGTCACAGCCAATGACCCTTTCAATTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: CVWHLGLVREGR*TVTANDPFNFF Trigger: GAAGAAATTGAAAGGGTCATTGGCTGTGACCGTGCACCTTCCCTCACGGACAAGGCCCAGATGCCATACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106337.7 ENSMUST00000200236.2 |
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| CDS CAA 90 bp | GGGTCTCTGTGTACTGACCACAGGTTGATTAGGACCACTGTGCCTTaGGGAATGGTGAACCCTTGGAGGACTGTTTTCTCCGAGGTCATG | + |
|
Preference number: 6 (lower is better) Translates to: GSLCTDHRLIRTTVP*GMVNPWRTVFSEVM Trigger: CATGACCTCGGAGAAAACAGTCCTCCAAGGGTTCACCATTCCCAAAGGCACAGTGGTCCTAATCAACCTGTGGTCAGTACACAGAGACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106337.7 ENSMUST00000200236.2 |
||
| CDS TCA 72 bp | CCTGCTCTTCCTCCATGTGCAGAAGGTACATGTCTATaGAGTCCTGAGGGTTGCTGGCATCCAGAGACTCTT | + |
|
Preference number: 6 (lower is better) Translates to: PALPPCAEGTCL*SPEGCWHPETL Trigger: AAGAGTCTCTGGATGCCAGCAACCCTCAGGACTTCATAGACATGTACCTTCTGCACATGGAGGAAGAGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106337.7 ENSMUST00000200236.2 |
||
| CDS CAA 72 bp | GCGTCGAGTGGGAGAATCTCCTCTGCTGTTTCCAAATaGGACCATAGTGTGCAAACACGATTCCCTTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: ASSGRISSAVSK*DHSVQTRFPSP Trigger: AGGAGAAGGGAATCGTGTTTGCACACTATGGTCCAATTTGGAAACAGCAGAGGAGATTCTCCCACTCGACGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106337.7 ENSMUST00000200236.2 |
||
| CDS CAA 72 bp | TGTACTGACCACAGGTTGATTAGGACCACTGTGCCTTaGGGAATGGTGAACCCTTGGAGGACTGTTTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: CTDHRLIRTTVP*GMVNPWRTVFS Trigger: GGAGAAAACAGTCCTCCAAGGGTTCACCATTCCCAAAGGCACAGTGGTCCTAATCAACCTGTGGTCAGTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106337.7 ENSMUST00000200236.2 |
||
| CDS TCA 72 bp | GGTTGCTGGCATCCAGAGACTCTTGATGCTCTCGGATaGTGTTTTTCAGGAAGCAGGATATGTCCCTTTCGA | + |
|
Preference number: 6 (lower is better) Translates to: GCWHPETLDALG*CFSGSRICPFR Trigger: TCGAAAGGGACATATCCTGCTTCCTGAAAAACATCATCCGAGAGCATCAAGAGTCTCTGGATGCCAGCAACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106337.7 ENSMUST00000200236.2 |
||
| CDS GCA 72 bp | TTCTCGGAACCCTCAGGTAACGCAAAGGTGAAAGTCTaGATCAGGCTCACGAACATCAGGAATAACTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: FSEPSGNAKVKV*IRLTNIRNNSI Trigger: GATGGAGTTATTCCTGATGTTCGTGAGCCTGATGCAGACTTTCACCTTTGCGTTACCTGAGGGTTCCGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106337.7 |
||
| CDS CAA 72 bp | TATGAAGTCCTGAGGGTTGCTGGCATCCAGAGACTCTaGATGCTCTCGGATGATGTTTTTCAGGAAGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: YEVLRVAGIQRL*MLSDDVFQEAG Trigger: TCCTGCTTCCTGAAAAACATCATCCGAGAGCATCAAGAGTCTCTGGATGCCAGCAACCCTCAGGACTTCATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106337.7 ENSMUST00000200236.2 |
||
| CDS CAA 90 bp | GTACATGTCTATGAAGTCCTGAGGGTTGCTGGCATCCAGAGACTCTaGATGCTCTCGGATGATGTTTTTCAGGAAGCAGGATATGTCCCT | + |
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Preference number: 6 (lower is better) Translates to: VHVYEVLRVAGIQRL*MLSDDVFQEAGYVP Trigger: AGGGACATATCCTGCTTCCTGAAAAACATCATCCGAGAGCATCAAGAGTCTCTGGATGCCAGCAACCCTCAGGACTTCATAGACATGTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106337.7 ENSMUST00000200236.2 |
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| CDS GCA 72 bp | GAATCTCCTCTGCTGTTTCCAAATTGGACCATAGTGTaGAAACACGATTCCCTTCTCCTTGGTCATGATGGA | + |
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Preference number: 6 (lower is better) Translates to: ESPLLFPNWTIV*KHDSLLLGHDG Trigger: TCCATCATGACCAAGGAGAAGGGAATCGTGTTTGCACACTATGGTCCAATTTGGAAACAGCAGAGGAGATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106337.7 ENSMUST00000200236.2 |
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