Pregenerated sensors for CYP2T4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078787Ensembl transcript IDs: ENSMUST00000108385.3, ENSMUST00000164093.8
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | ACACTTGTATTCCTCTCTGTAAAGAGATTTACACATACAGTTAGGGCAGGTAAGGATCGAAGACAGCCATaGCCCCGCGGCCGGAGAACG | + |
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Preference number: 4 (lower is better) Translates to: TLVFLSVKRFTHTVRAGKDRRQP*PRGRRT Trigger: CGTTCTCCGGCCGCGGGGCCATGGCTGTCTTCGATC...CTTACCTGCCCTAACTGTATGTGTAAATCTCTTTACAGAGAGGAATACAAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108385.3 |
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| CDS-3UTR CCA 90 bp | CTTGTATTCCTCTCTGTAAAGAGATTTACACATACAGTTAGGGCAGGTAAGGATGCGGAGCTGGAAGGCTaGGGGCACATTACCCAGACC | + |
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Preference number: 4 (lower is better) Translates to: LVFLSVKRFTHTVRAGKDAELEG*GHITQT Trigger: GGTCTGGGTAATGTGCCCCCAGCCTTCCAGCTCCGC...ATCCTTACCTGCCCTAACTGTATGTGTAAATCTCTTTACAGAGAGGAATACAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108385.3 |
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| CDS-3UTR TCA 90 bp | CTTGTATTCCTCTCTGTAAAGAGATTTACACATACAGTTAGGGCAGGTAAGGATGGCTGGAGAGCTCCATaGGCACACGGTCCAAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: LVFLSVKRFTHTVRAGKDGWRAP*AHGPSL Trigger: GAGACTTGGACCGTGTGCTCATGGAGCTCTCCAGCC...ATCCTTACCTGCCCTAACTGTATGTGTAAATCTCTTTACAGAGAGGAATACAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108385.3 |
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| CDS-3UTR GCA 90 bp | ACACTTGTATTCCTCTCTGTAAAGAGATTTACACATACAGTTAGGGCAGGTAAGGCGTCCAGCTCCTCTTaGACCTTGGCTGCCACCTCA | + |
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Preference number: 4 (lower is better) Translates to: TLVFLSVKRFTHTVRAGKASSSS*TLAATS Trigger: TGAGGTGGCAGCCAAGGTGCAAGAGGAGCTGGACGC...CTTACCTGCCCTAACTGTATGTGTAAATCTCTTTACAGAGAGGAATACAAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108385.3 |
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| CDS-3UTR CCA 90 bp | GAGCTGCACACACTTGTATTCCTCTCTGTAAAGAGATTTACACATACAGTTAGGCCATACAGTGAACACTaGGCCCCAGTGGCTGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: ELHTLVFLSVKRFTHTVRPYSEH*APVAGE Trigger: CTCTCCAGCCACTGGGGCCCAGTGTTCACTGTATGG...CCTAACTGTATGTGTAAATCTCTTTACAGAGAGGAATACAAGTGTGTGCAGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108385.3 |
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| CDS-3UTR TCA 90 bp | TCAGAGCTGCACACACTTGTATTCCTCTCTGTAAAGAGATTTACACATACAGTTAAGTCTTTCTGCATCTaGGCTTGGCGGCGGACCACC | + |
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Preference number: 4 (lower is better) Translates to: SELHTLVFLSVKRFTHTVKSFCI*AWRRTT Trigger: GGTGGTCCGCCGCCAAGCTCAGATGCAGAAAGACTT...AACTGTATGTGTAAATCTCTTTACAGAGAGGAATACAAGTGTGTGCAGCTCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108385.3 |
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| CDS-3UTR GCA 90 bp | GAGCTGCACACACTTGTATTCCTCTCTGTAAAGAGATTTACACATACAGTTAGGCTCTTGCACCTTGGCTaGCACCTCAGGGTACTTGAG | + |
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Preference number: 4 (lower is better) Translates to: ELHTLVFLSVKRFTHTVRLLHLG*HLRVLE Trigger: CTCAAGTACCCTGAGGTGGCAGCCAAGGTGCAAGAG...CCTAACTGTATGTGTAAATCTCTTTACAGAGAGGAATACAAGTGTGTGCAGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108385.3 |
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| CDS-3UTR CCA 90 bp | CTTGTATTCCTCTCTGTAAAGAGATTTACACATACAGTTAGGGCAGGTAAGGATGAGCCTCCGGAACTCTaGGTCCCCATAGTCATAGCG | + |
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Preference number: 4 (lower is better) Translates to: LVFLSVKRFTHTVRAGKDEPPEL*VPIVIA Trigger: CGCTATGACTATGGGGACCCAGAGTTCCGGAGGCTC...ATCCTTACCTGCCCTAACTGTATGTGTAAATCTCTTTACAGAGAGGAATACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108385.3 |
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| CDS-3UTR TCA 90 bp | TCAGAGCTGCACACACTTGTATTCCTCTCTGTAAAGAGATTTACACATACAGTTTTCCCCAGTCTGTCGTaGCTGCCAGTGCCACTGAAT | + |
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Preference number: 4 (lower is better) Translates to: SELHTLVFLSVKRFTHTVFPSLS*LPVPLN Trigger: ATTCAGTGGCACTGGCAGTCACGACAGACTGGGGAA...AACTGTATGTGTAAATCTCTTTACAGAGAGGAATACAAGTGTGTGCAGCTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108385.3 |
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| CDS-3UTR GCA 90 bp | CTTGTATTCCTCTCTGTAAAGAGATTTACACATACAGTTAGGGCAGGTAAGGATCTGCCTCCTCCAGGATaGGATCCTCAATGGTACTCC | + |
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Preference number: 4 (lower is better) Translates to: LVFLSVKRFTHTVRAGKDLPPPG*DPQWYS Trigger: GGAGTACCATTGAGGATCGCATCCTGGAGGAGGCAG...ATCCTTACCTGCCCTAACTGTATGTGTAAATCTCTTTACAGAGAGGAATACAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108385.3 |
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| CDS-3UTR GCA 90 bp | CACACACTTGTATTCCTCTCTGTAAAGAGATTTACACATACAGTTAGGGCAGGTGGGGAATCACGAATGTaGCCTTGTGCAGGAAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: HTLVFLSVKRFTHTVRAGGESRM*PCAGSG Trigger: ACCACTTCCTGCACAAGGGCACATTCGTGATTCCCC...ACCTGCCCTAACTGTATGTGTAAATCTCTTTACAGAGAGGAATACAAGTGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108385.3 |
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| CDS-3UTR CCA 90 bp | TCAGAGCTGCACACACTTGTATTCCTCTCTGTAAAGAGATTTACACATACAGTTCTATCCAGTAGCTGCTaGGGGTCAAATGGAGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: SELHTLVFLSVKRFTHTVLSSSC*GSNGAP Trigger: GGGAGCTCCATTTGACCCCCAGCAGCTACTGGATAG...AACTGTATGTGTAAATCTCTTTACAGAGAGGAATACAAGTGTGTGCAGCTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108385.3 |
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| CDS-3UTR CCA 90 bp | TCAGAGCTGCACACACTTGTATTCCTCTCTGTAAAGAGATTTACACATACAGTTTCAGGGTCCTTGAATTaGGTGGGATCCCGGTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: SELHTLVFLSVKRFTHTVSGSLN*VGSRCA Trigger: TGCACACCGGGATCCCACCCAATTCAAGGACCCTGA...AACTGTATGTGTAAATCTCTTTACAGAGAGGAATACAAGTGTGTGCAGCTCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108385.3 |
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| CDS-3UTR TCA 90 bp | CACACACTTGTATTCCTCTCTGTAAAGAGATTTACACATACAGTTAGGGCAGGTCAGGGATCCAGTCCATaGAGGATGGGAACATATTAT | + |
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Preference number: 4 (lower is better) Translates to: HTLVFLSVKRFTHTVRAGQGSSP*RMGTYY Trigger: ATAATATGTTCCCATCCTTCATGGACTGGATCCCTG...ACCTGCCCTAACTGTATGTGTAAATCTCTTTACAGAGAGGAATACAAGTGTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108385.3 |
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| CDS-3UTR GCA 90 bp | TCAGAGCTGCACACACTTGTATTCCTCTCTGTAAAGAGATTTACACATACAGTTGAGAACGCATCTGCTTaGAGTACTAATGCATCTCGG | + |
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Preference number: 4 (lower is better) Translates to: SELHTLVFLSVKRFTHTVENASA*STNASR Trigger: CCGAGATGCATTAGTACTGCAAGCAGATGCGTTCTC...AACTGTATGTGTAAATCTCTTTACAGAGAGGAATACAAGTGTGTGCAGCTCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108385.3 |
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| CDS-3UTR GCA 90 bp | GTATTCCTCTCTGTAAAGAGATTTACACATACAGTTAGGGCAGGTAAGGATATCTGGCTTTCCAGGTCCTaGTGTTCCTTATCCATTTGG | + |
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Preference number: 4 (lower is better) Translates to: VFLSVKRFTHTVRAGKDIWLSRS*CSLSIW Trigger: CCAAATGGATAAGGAACAGCAGGACCTGGAAAGCCA...GATATCCTTACCTGCCCTAACTGTATGTGTAAATCTCTTTACAGAGAGGAATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108385.3 |
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| CDS-3UTR CCA 90 bp | ACACTTGTATTCCTCTCTGTAAAGAGATTTACACATACAGTTAGGGCAGGTAAGCCCTTGTGCAGGAAGTaGTTCTTGAGGTTTACGTCT | + |
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Preference number: 4 (lower is better) Translates to: TLVFLSVKRFTHTVRAGKPLCRK*FLRFTS Trigger: AGACGTAAACCTCAAGAACCACTTCCTGCACAAGGG...CTTACCTGCCCTAACTGTATGTGTAAATCTCTTTACAGAGAGGAATACAAGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108385.3 |
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| CDS-3UTR GCA 90 bp | CACACACTTGTATTCCTCTCTGTAAAGAGATTTACACATACAGTTAGGGCAGGTTGCTTGTGGTTTCAGTaGCACCAAAGAAAAGATCGT | + |
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Preference number: 4 (lower is better) Translates to: HTLVFLSVKRFTHTVRAGCLWFQ*HQRKDR Trigger: ACGATCTTTTCTTTGGTGGCACTGAAACCACAAGCA...ACCTGCCCTAACTGTATGTGTAAATCTCTTTACAGAGAGGAATACAAGTGTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108385.3 |
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| CDS-3UTR TCA 90 bp | GAGCTGCACACACTTGTATTCCTCTCTGTAAAGAGATTTACACATACAGTTAGGAAACCACAGTACAAATaGCATTGGATACAGCACTAT | + |
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Preference number: 4 (lower is better) Translates to: ELHTLVFLSVKRFTHTVRKPQYK*HWIQHY Trigger: ATAGTGCTGTATCCAATGTCATTTGTACTGTGGTTT...CCTAACTGTATGTGTAAATCTCTTTACAGAGAGGAATACAAGTGTGTGCAGCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108385.3 |
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| CDS-3UTR CCA 90 bp | GAGCTGCACACACTTGTATTCCTCTCTGTAAAGAGATTTACACATACAGTTAGGAAGAGTCGGAGCTCTTaGAAGTTTTTAAATATTCGG | + |
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Preference number: 4 (lower is better) Translates to: ELHTLVFLSVKRFTHTVRKSRSS*KFLNIR Trigger: CCGAATATTTAAAAACTTCCAAGAGCTCCGACTCTT...CCTAACTGTATGTGTAAATCTCTTTACAGAGAGGAATACAAGTGTGTGCAGCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108385.3 |
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| CDS-3UTR CCA 90 bp | TCAGAGCTGCACACACTTGTATTCCTCTCTGTAAAGAGATTTACACATACAGTTTGTTCCTTATCCATTTaGTCGAGGAAACAATCAATG | + |
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Preference number: 4 (lower is better) Translates to: SELHTLVFLSVKRFTHTVCSLSI*SRKQSM Trigger: CATTGATTGTTTCCTCGACCAAATGGATAAGGAACA...AACTGTATGTGTAAATCTCTTTACAGAGAGGAATACAAGTGTGTGCAGCTCTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108385.3 |
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| CDS CCA 90 bp | GCAGACACAAGTAGGGGAATCACGAATGTGCCCTTGTGCAGGAAGTaGTTCTTGAGGTTTACGTCTCGGGTGAGGGCCCGGGGCAGCCCC | + |
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Preference number: 5 (lower is better) Translates to: ADTSRGITNVPLCRK*FLRFTSRVRARGSP Trigger: GGGGCTGCCCCGGGCCCTCACCCGAGACGTAAACCTCAAGAACCACTTCCTGCACAAGGGCACATTCGTGATTCCCCTACTTGTGTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108385.3 ENSMUST00000164093.8 |
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| CDS CCA 90 bp | GCGGAGCTGGAAGGCTGGGGGCACATTACCCAGACCAGTACACTGTaGGTTAAGGTTGATGTTGGCAGGACTTCCCACAGGGAGCAGGGA | + |
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Preference number: 5 (lower is better) Translates to: AELEGWGHITQTSTL*VKVDVGRTSHREQG Trigger: TCCCTGCTCCCTGTGGGAAGTCCTGCCAACATCAACCTTAACCCACAGTGTACTGGTCTGGGTAATGTGCCCCCAGCCTTCCAGCTCCGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108385.3 ENSMUST00000164093.8 |
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| CDS GCA 90 bp | TCCCGGTGTGCAGACACAAGTAGGGGAATCACGAATGTGCCCTTGTaGAGGAAGTGGTTCTTGAGGTTTACGTCTCGGGTGAGGGCCCGG | + |
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Preference number: 5 (lower is better) Translates to: SRCADTSRGITNVPL*RKWFLRFTSRVRAR Trigger: CCGGGCCCTCACCCGAGACGTAAACCTCAAGAACCACTTCCTGCACAAGGGCACATTCGTGATTCCCCTACTTGTGTCTGCACACCGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108385.3 ENSMUST00000164093.8 |
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| CDS CCA 90 bp | TTCTGGAACTCGCCATGGTCATCCAGGAAATTGGTGGGATTGAAATaGTCAGGGTCCTTGAATTGGGTGGGATCCCGGTGTGCAGACACA | + |
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Preference number: 5 (lower is better) Translates to: FWNSPWSSRKLVGLK*SGSLNWVGSRCADT Trigger: TGTGTCTGCACACCGGGATCCCACCCAATTCAAGGACCCTGACCATTTCAATCCCACCAATTTCCTGGATGACCATGGCGAGTTCCAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108385.3 ENSMUST00000164093.8 |
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| CDS CCA 90 bp | TCATCCAGGAAATTGGTGGGATTGAAATGGTCAGGGTCCTTGAATTaGGTGGGATCCCGGTGTGCAGACACAAGTAGGGGAATCACGAAT | + |
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Preference number: 5 (lower is better) Translates to: SSRKLVGLKWSGSLN*VGSRCADTSRGITN Trigger: ATTCGTGATTCCCCTACTTGTGTCTGCACACCGGGATCCCACCCAATTCAAGGACCCTGACCATTTCAATCCCACCAATTTCCTGGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108385.3 ENSMUST00000164093.8 |
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| CDS-3UTR CAA 90 bp | CACACACTTGTATTCCTCTCTGTAAAGAGATTTACACATACAGTTAGGGCAGGTAGCTCCTCTTGCACCTaGGCTGCCACCTCAGGGTAC | + |
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Preference number: 5 (lower is better) Translates to: HTLVFLSVKRFTHTVRAGSSSCT*AATSGY Trigger: GTACCCTGAGGTGGCAGCCAAGGTGCAAGAGGAGCT...ACCTGCCCTAACTGTATGTGTAAATCTCTTTACAGAGAGGAATACAAGTGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108385.3 |
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| CDS-3UTR CAA 90 bp | TCAGAGCTGCACACACTTGTATTCCTCTCTGTAAAGAGATTTACACATACAGTTGTCAGGGTCCTTGAATaGGGTGGGATCCCGGTGTGC | + |
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Preference number: 5 (lower is better) Translates to: SELHTLVFLSVKRFTHTVVRVLE*GGIPVC Trigger: GCACACCGGGATCCCACCCAATTCAAGGACCCTGAC...AACTGTATGTGTAAATCTCTTTACAGAGAGGAATACAAGTGTGTGCAGCTCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108385.3 |
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| CDS-3UTR CAA 90 bp | GTATTCCTCTCTGTAAAGAGATTTACACATACAGTTAGGGCAGGTAAGGATATCAAATGGTCAGGGTCCTaGAATTGGGTGGGATCCCGG | + |
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Preference number: 5 (lower is better) Translates to: VFLSVKRFTHTVRAGKDIKWSGS*NWVGSR Trigger: CCGGGATCCCACCCAATTCAAGGACCCTGACCATTT...GATATCCTTACCTGCCCTAACTGTATGTGTAAATCTCTTTACAGAGAGGAATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108385.3 |
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| CDS-3UTR CAA 90 bp | ACACTTGTATTCCTCTCTGTAAAGAGATTTACACATACAGTTAGGGCAGGTAAGGGCATGAAGGCATCGTaGTTCTGGAACTCGCCATGG | + |
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Preference number: 5 (lower is better) Translates to: TLVFLSVKRFTHTVRAGKGMKAS*FWNSPW Trigger: CCATGGCGAGTTCCAGAACAACGATGCCTTCATGCC...CTTACCTGCCCTAACTGTATGTGTAAATCTCTTTACAGAGAGGAATACAAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108385.3 |
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| CDS-3UTR CAA 90 bp | CTTGTATTCCTCTCTGTAAAGAGATTTACACATACAGTTAGGGCAGGTAAGGATGGGTTAAGGTTGATGTaGGCAGGACTTCCCACAGGG | + |
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Preference number: 5 (lower is better) Translates to: LVFLSVKRFTHTVRAGKDGLRLM*AGLPTG Trigger: CCCTGTGGGAAGTCCTGCCAACATCAACCTTAACCC...ATCCTTACCTGCCCTAACTGTATGTGTAAATCTCTTTACAGAGAGGAATACAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108385.3 |
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| CDS CCA 90 bp | TTTAAATATTCGGTTGTGGGGCCCAGGGATCCAGTCCATGAAGGATaGGAACATATTATATATCTCAGCCCATCGGGAACTCATGATACA | + |
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Preference number: 5 (lower is better) Translates to: FKYSVVGPRDPVHEG*EHIIYLSPSGTHDT Trigger: TGTATCATGAGTTCCCGATGGGCTGAGATATATAATATGTTCCCATCCTTCATGGACTGGATCCCTGGGCCCCACAACCGAATATTTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108385.3 ENSMUST00000164093.8 |
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| CDS-3UTR CAA 90 bp | CACACACTTGTATTCCTCTCTGTAAAGAGATTTACACATACAGTTAGGGCAGGTCCAGTGCCACTGAATTaGCTCAGAGATGAAGAGTCG | + |
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Preference number: 5 (lower is better) Translates to: HTLVFLSVKRFTHTVRAGPVPLN*LRDEES Trigger: CGACTCTTCATCTCTGAGCAAATTCAGTGGCACTGG...ACCTGCCCTAACTGTATGTGTAAATCTCTTTACAGAGAGGAATACAAGTGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108385.3 |
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| CDS-3UTR CAA 90 bp | TCAGAGCTGCACACACTTGTATTCCTCTCTGTAAAGAGATTTACACATACAGTTCACTGTGGGTTAAGGTaGATGTTGGCAGGACTTCCC | + |
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Preference number: 5 (lower is better) Translates to: SELHTLVFLSVKRFTHTVHCGLR*MLAGLP Trigger: GGGAAGTCCTGCCAACATCAACCTTAACCCACAGTG...AACTGTATGTGTAAATCTCTTTACAGAGAGGAATACAAGTGTGTGCAGCTCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108385.3 |
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| CDS-3UTR CAA 90 bp | GAGCTGCACACACTTGTATTCCTCTCTGTAAAGAGATTTACACATACAGTTAGGTTTTTAAATATTCGGTaGTGGGGCCCAGGGATCCAG | + |
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Preference number: 5 (lower is better) Translates to: ELHTLVFLSVKRFTHTVRFLNIR*WGPGIQ Trigger: CTGGATCCCTGGGCCCCACAACCGAATATTTAAAAA...CCTAACTGTATGTGTAAATCTCTTTACAGAGAGGAATACAAGTGTGTGCAGCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108385.3 |
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| CDS-3UTR CAA 90 bp | TCAGAGCTGCACACACTTGTATTCCTCTCTGTAAAGAGATTTACACATACAGTTAGGAAATTGGTGGGATaGAAATGGTCAGGGTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: SELHTLVFLSVKRFTHTVRKLVG*KWSGSL Trigger: CAAGGACCCTGACCATTTCAATCCCACCAATTTCCT...AACTGTATGTGTAAATCTCTTTACAGAGAGGAATACAAGTGTGTGCAGCTCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108385.3 |
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| CDS-3UTR CAA 90 bp | ACACTTGTATTCCTCTCTGTAAAGAGATTTACACATACAGTTAGGGCAGGTAAGTGGTCATCCAGGAAATaGGTGGGATTGAAATGGTCA | + |
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Preference number: 5 (lower is better) Translates to: TLVFLSVKRFTHTVRAGKWSSRK*VGLKWS Trigger: TGACCATTTCAATCCCACCAATTTCCTGGATGACCA...CTTACCTGCCCTAACTGTATGTGTAAATCTCTTTACAGAGAGGAATACAAGTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108385.3 |
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| CDS-3UTR CAA 90 bp | CACACACTTGTATTCCTCTCTGTAAAGAGATTTACACATACAGTTAGGGCAGGTCTCATGATACAGAAATaGTCACTGAAGAGGTTTAGG | + |
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Preference number: 5 (lower is better) Translates to: HTLVFLSVKRFTHTVRAGLMIQK*SLKRFR Trigger: CCTAAACCTCTTCAGTGACAATTTCTGTATCATGAG...ACCTGCCCTAACTGTATGTGTAAATCTCTTTACAGAGAGGAATACAAGTGTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108385.3 |
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| CDS-3UTR CAA 90 bp | GAGCTGCACACACTTGTATTCCTCTCTGTAAAGAGATTTACACATACAGTTAGGGAAGAGTCGGAGCTCTaGGAAGTTTTTAAATATTCG | + |
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Preference number: 5 (lower is better) Translates to: ELHTLVFLSVKRFTHTVREESEL*EVFKYS Trigger: CGAATATTTAAAAACTTCCAAGAGCTCCGACTCTTC...CCTAACTGTATGTGTAAATCTCTTTACAGAGAGGAATACAAGTGTGTGCAGCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108385.3 |
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| CDS-3UTR CAA 90 bp | GTATTCCTCTCTGTAAAGAGATTTACACATACAGTTAGGGCAGGTAAGGATATCCTGTTCCTTATCCATTaGGTCGAGGAAACAATCAAT | + |
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Preference number: 5 (lower is better) Translates to: VFLSVKRFTHTVRAGKDILFLIH*VEETIN Trigger: ATTGATTGTTTCCTCGACCAAATGGATAAGGAACAG...GATATCCTTACCTGCCCTAACTGTATGTGTAAATCTCTTTACAGAGAGGAATAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108385.3 |
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| CDS CAA 72 bp | GTCCGACCTACAGTGGCGTCCAGCTCCTCTTGCACCTaGGCTGCCACCTCAGGGTACTTGAGCATAATGAGG | + |
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Preference number: 6 (lower is better) Translates to: VRPTVASSSSCT*AATSGYLSIMR Trigger: CCTCATTATGCTCAAGTACCCTGAGGTGGCAGCCAAGGTGCAAGAGGAGCTGGACGCCACTGTAGGTCGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108385.3 ENSMUST00000164093.8 |
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| CDS CAA 90 bp | GGATCCCGGTGTGCAGACACAAGTAGGGGAATCACGAATGTGCCCTaGTGCAGGAAGTGGTTCTTGAGGTTTACGTCTCGGGTGAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: GSRCADTSRGITNVP*CRKWFLRFTSRVRA Trigger: GGCCCTCACCCGAGACGTAAACCTCAAGAACCACTTCCTGCACAAGGGCACATTCGTGATTCCCCTACTTGTGTCTGCACACCGGGATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108385.3 ENSMUST00000164093.8 |
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| CDS CCA 72 bp | AGTAGGGGAATCACGAATGTGCCCTTGTGCAGGAAGTaGTTCTTGAGGTTTACGTCTCGGGTGAGGGCCCGG | + |
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Preference number: 6 (lower is better) Translates to: SRGITNVPLCRK*FLRFTSRVRAR Trigger: CCGGGCCCTCACCCGAGACGTAAACCTCAAGAACCACTTCCTGCACAAGGGCACATTCGTGATTCCCCTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108385.3 ENSMUST00000164093.8 |
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| CDS CAA 90 bp | AAGGCTGGGGGCACATTACCCAGACCAGTACACTGTGGGTTAAGGTaGATGTTGGCAGGACTTCCCACAGGGAGCAGGGAGAACTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: KAGGTLPRPVHCGLR*MLAGLPTGSRENFC Trigger: GCAGAAGTTCTCCCTGCTCCCTGTGGGAAGTCCTGCCAACATCAACCTTAACCCACAGTGTACTGGTCTGGGTAATGTGCCCCCAGCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108385.3 ENSMUST00000164093.8 |
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| CDS CCA 72 bp | GAAGGCTGGGGGCACATTACCCAGACCAGTACACTGTaGGTTAAGGTTGATGTTGGCAGGACTTCCCACAGG | + |
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Preference number: 6 (lower is better) Translates to: EGWGHITQTSTL*VKVDVGRTSHR Trigger: CCTGTGGGAAGTCCTGCCAACATCAACCTTAACCCACAGTGTACTGGTCTGGGTAATGTGCCCCCAGCCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108385.3 ENSMUST00000164093.8 |
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| CDS CAA 90 bp | GGGGGCACATTACCCAGACCAGTACACTGTGGGTTAAGGTTGATGTaGGCAGGACTTCCCACAGGGAGCAGGGAGAACTTCTGCAGGATA | + |
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Preference number: 6 (lower is better) Translates to: GGTLPRPVHCGLRLM*AGLPTGSRENFCRI Trigger: TATCCTGCAGAAGTTCTCCCTGCTCCCTGTGGGAAGTCCTGCCAACATCAACCTTAACCCACAGTGTACTGGTCTGGGTAATGTGCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108385.3 ENSMUST00000164093.8 |
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| CDS GCA 72 bp | GCAGACACAAGTAGGGGAATCACGAATGTGCCCTTGTaGAGGAAGTGGTTCTTGAGGTTTACGTCTCGGGTG | + |
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Preference number: 6 (lower is better) Translates to: ADTSRGITNVPL*RKWFLRFTSRV Trigger: CACCCGAGACGTAAACCTCAAGAACCACTTCCTGCACAAGGGCACATTCGTGATTCCCCTACTTGTGTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108385.3 ENSMUST00000164093.8 |
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| CDS CAA 72 bp | TTACCCAGACCAGTACACTGTGGGTTAAGGTTGATGTaGGCAGGACTTCCCACAGGGAGCAGGGAGAACTTC | + |
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Preference number: 6 (lower is better) Translates to: LPRPVHCGLRLM*AGLPTGSRENF Trigger: GAAGTTCTCCCTGCTCCCTGTGGGAAGTCCTGCCAACATCAACCTTAACCCACAGTGTACTGGTCTGGGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108385.3 ENSMUST00000164093.8 |
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| CDS CAA 90 bp | CCATGGTCATCCAGGAAATTGGTGGGATTGAAATGGTCAGGGTCCTaGAATTGGGTGGGATCCCGGTGTGCAGACACAAGTAGGGGAATC | + |
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Preference number: 6 (lower is better) Translates to: PWSSRKLVGLKWSGS*NWVGSRCADTSRGI Trigger: GATTCCCCTACTTGTGTCTGCACACCGGGATCCCACCCAATTCAAGGACCCTGACCATTTCAATCCCACCAATTTCCTGGATGACCATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108385.3 ENSMUST00000164093.8 |
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| CDS TCA 72 bp | GCTGTTCCTTATCCATTTGGTCGAGGAAACAATCAATaGAGTCACGGGGTTCCCCAGTCTGTCGTGACTGCC | + |
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Preference number: 6 (lower is better) Translates to: AVPYPFGRGNNQ*SHGVPQSVVTA Trigger: GGCAGTCACGACAGACTGGGGAACCCCGTGACTTCATTGATTGTTTCCTCGACCAAATGGATAAGGAACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108385.3 ENSMUST00000164093.8 |
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| CDS CAA 72 bp | TGTGCAGACACAAGTAGGGGAATCACGAATGTGCCCTaGTGCAGGAAGTGGTTCTTGAGGTTTACGTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: CADTSRGITNVP*CRKWFLRFTSR Trigger: CCGAGACGTAAACCTCAAGAACCACTTCCTGCACAAGGGCACATTCGTGATTCCCCTACTTGTGTCTGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108385.3 ENSMUST00000164093.8 |
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| CDS CAA 72 bp | TCCAGGAAATTGGTGGGATTGAAATGGTCAGGGTCCTaGAATTGGGTGGGATCCCGGTGTGCAGACACAAGT | + |
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Preference number: 6 (lower is better) Translates to: SRKLVGLKWSGS*NWVGSRCADTS Trigger: ACTTGTGTCTGCACACCGGGATCCCACCCAATTCAAGGACCCTGACCATTTCAATCCCACCAATTTCCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108385.3 ENSMUST00000164093.8 |
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| CDS CAA 90 bp | ATGAAGGCATCGTTGTTCTGGAACTCGCCATGGTCATCCAGGAAATaGGTGGGATTGAAATGGTCAGGGTCCTTGAATTGGGTGGGATCC | + |
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Preference number: 6 (lower is better) Translates to: MKASLFWNSPWSSRK*VGLKWSGSLNWVGS Trigger: GGATCCCACCCAATTCAAGGACCCTGACCATTTCAATCCCACCAATTTCCTGGATGACCATGGCGAGTTCCAGAACAACGATGCCTTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108385.3 ENSMUST00000164093.8 |
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| CDS CAA 72 bp | GAAATGGCTTTCCAGGTCCTGCTGTTCCTTATCCATTaGGTCGAGGAAACAATCAATGAAGTCACGGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: EMAFQVLLFLIH*VEETINEVTGF Trigger: GAACCCCGTGACTTCATTGATTGTTTCCTCGACCAAATGGATAAGGAACAGCAGGACCTGGAAAGCCATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108385.3 ENSMUST00000164093.8 |
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