Pregenerated sensors for CYP2S1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040703Ensembl transcript IDs: ENSMUST00000043314.10, ENSMUST00000108395.8, ENSMUST00000156714.2
Found 162 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAGGCCTTCTCCCAGGCAGACTCGCTTACCTGGCAGGGAAGGACTaGGTCAGCTGCGGTCACATCTGGCTCCACAGATATGGGGAGCCG | + |
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Preference number: 1 (lower is better) Translates to: PGLLPGRLAYLAGKD*VSCGHIWLHRYGEP Trigger: CGGCTCCCCATATCTGTGGAGCCAGATGTGACCGCAGCTGACTCAGTCCTTCCCTGCCAGGTAAGCGAGTCTGCCTGGGAGAAGGCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108395.8 |
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| 3UTR CCA 90 bp | AGGGAAGGACTGAGTCAGCTGCGGTCACATCTGGCTCCACAGATATaGGGAGCCGACAGAGACCCTGGGGTGCAGGAACGTGCTCCTCAA | + |
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Preference number: 1 (lower is better) Translates to: REGLSQLRSHLAPQI*GADRDPGVQERAPQ Trigger: TTGAGGAGCACGTTCCTGCACCCCAGGGTCTCTGTCGGCTCCCCATATCTGTGGAGCCAGATGTGACCGCAGCTGACTCAGTCCTTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108395.8 |
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| 3UTR GCA 90 bp | TTCTGTCCTGATAAGGAGGGCTGGAAACAGCTAACAGCACTCCCCTaGATCATCCCTGTGAGGCCAGTTAGTCCTTCCAGGAGGAGGATA | + |
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Preference number: 1 (lower is better) Translates to: FCPDKEGWKQLTALP*IIPVRPVSPSRRRI Trigger: TATCCTCCTCCTGGAAGGACTAACTGGCCTCACAGGGATGATGCAGGGGAGTGCTGTTAGCTGTTTCCAGCCCTCCTTATCAGGACAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| 3UTR CCA 90 bp | AGTCACAAAGAGGTCAGCTATGGCTTCTGTCCTGATAAGGAGGGCTaGAAACAGCTAACAGCACTCCCCTGCATCATCCCTGTGAGGCCA | + |
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Preference number: 1 (lower is better) Translates to: SHKEVSYGFCPDKEG*KQLTALPCIIPVRP Trigger: TGGCCTCACAGGGATGATGCAGGGGAGTGCTGTTAGCTGTTTCCAGCCCTCCTTATCAGGACAGAAGCCATAGCTGACCTCTTTGTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| 3UTR TCA 90 bp | TGTAATTCCAGCGAGCAGGACACCGAGGCGGGAGGATCACAAGTTTaGGTTCGGCTTGTGTCACCACATAACAAGATCCCCGTTTCAGAC | + |
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Preference number: 1 (lower is better) Translates to: CNSSEQDTEAGGSQV*VRLVSPHNKIPVSD Trigger: GTCTGAAACGGGGATCTTGTTATGTGGTGACACAAGCCGAACTCAAACTTGTGATCCTCCCGCCTCGGTGTCCTGCTCGCTGGAATTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| 3UTR TCA 90 bp | CACTCTCATGAGGACTTGCAGGCAGCTCAGAGATCAGAATGCGTTTaGGAGCAGGCCCCTGATAACATGACTGGGAAACCCTTTTTCTTT | + |
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Preference number: 1 (lower is better) Translates to: HSHEDLQAAQRSECV*EQAPDNMTGKPFFF Trigger: AAAGAAAAAGGGTTTCCCAGTCATGTTATCAGGGGCCTGCTCTCAAACGCATTCTGATCTCTGAGCTGCCTGCAAGTCCTCATGAGAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| 3UTR TCA 90 bp | CTATATGCTTGCAATTCCAGATGGCCTATATTACATGATGTAGGCTaGAAGCCTATGCAGCTCATGGTGGCGCATACCTGTAATTCCAGC | + |
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Preference number: 1 (lower is better) Translates to: LYACNSRWPILHDVG*KPMQLMVAHTCNSS Trigger: GCTGGAATTACAGGTATGCGCCACCATGAGCTGCATAGGCTTTCAGCCTACATCATGTAATATAGGCCATCTGGAATTGCAAGCATATAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| 3UTR-3UTR TCA 90 bp | GGCTGGCTTCAGGCTCAGGTCACCCGGCGGGCACGGGGTCTCCAGGGAGAAGGCCTGGCAGGGAAGGACTaGGTCAGCTGCGGTCACATC | + |
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Preference number: 2 (lower is better) Translates to: GWLQAQVTRRARGLQGEGLAGKD*VSCGHI Trigger: GATGTGACCGCAGCTGACTCAGTCCTTCCCTGCCAG...GCCTTCTCCCTGGAGACCCCGTGCCCGCCGGGTGACCTGAGCCTGAAGCCAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108395.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGCTTCAGGCTCAGGTCACCCGGCGGGCACGGGGTCTCCAGGGAGAAGGCTTGGTTGTGTAGTGGTGTaGTCCCTGGTCTCCACAGCT | + |
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Preference number: 2 (lower is better) Translates to: LASGSGHPAGTGSPGRRLGCVVV*SLVSTA Trigger: AGCTGTGGAGACCAGGGACCACACCACTACACAACC...AAGCCTTCTCCCTGGAGACCCCGTGCCCGCCGGGTGACCTGAGCCTGAAGCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108395.8 |
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| 3UTR-3UTR TCA 90 bp | GGAGGGCTGGAAACAGCTAACAGCACTCCCCTGCATCATCCCTGTGAGGCCAGTACATCGTTCTGGCTGTaGCATGACCCCAGCTGGGGC | + |
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Preference number: 2 (lower is better) Translates to: GGLETANSTPLHHPCEASTSFWL*HDPSWG Trigger: GCCCCAGCTGGGGTCATGTCACAGCCAGAACGATGT...ACTGGCCTCACAGGGATGATGCAGGGGAGTGCTGTTAGCTGTTTCCAGCCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| 3UTR-3UTR TCA 90 bp | ACATTTGTTGGAAGGAGCGTGCTGGAGGGGCATGGGTGTGGACGTGACTGGGGACCTGCATCATCCCTGTaGGGCCAGTTAGTCCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: TFVGRSVLEGHGCGRDWGPASSL*GQLVLP Trigger: TGGAAGGACTAACTGGCCTCACAGGGATGATGCAGG...TCCCCAGTCACGTCCACACCCATGCCCCTCCAGCACGCTCCTTCCAACAAATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| 3UTR-3UTR CCA 90 bp | ACATTTGTTGGAAGGAGCGTGCTGGAGGGGCATGGGTGTGGACGTGACTGGGGAAAGTCCACTGATGGCTaGCTTCAGGCTCAGGTCACC | + |
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Preference number: 2 (lower is better) Translates to: TFVGRSVLEGHGCGRDWGKSTDG*LQAQVT Trigger: GGTGACCTGAGCCTGAAGCCAGCCATCAGTGGACTT...TCCCCAGTCACGTCCACACCCATGCCCCTCCAGCACGCTCCTTCCAACAAATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108395.8 |
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| 3UTR-3UTR TCA 90 bp | TGTCACATACGGTTTGGCTGTGTGGATTACTGGCTGGTGGCCGTTGATAGAGCCGTTCTGGCTGTGACATaGCCCCAGCTGGGGCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: CHIRFGCVDYWLVAVDRAVLAVT*PQLGLA Trigger: AGCAAGCCCCAGCTGGGGTCATGTCACAGCCAGAAC...GGCTCTATCAACGGCCACCAGCCAGTAATCCACACAGCCAAACCGTATGTGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGAGGGCTGGAAACAGCTAACAGCACTCCCCTGCATCATCCCTGTGAGGCCATACGGTTTGGCTGTGTaGATTACTGGCTGGTGGCCG | + |
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Preference number: 2 (lower is better) Translates to: KEGWKQLTALPCIIPVRPYGLAV*ITGWWP Trigger: CGGCCACCAGCCAGTAATCCACACAGCCAAACCGTA...TGGCCTCACAGGGATGATGCAGGGGAGTGCTGTTAGCTGTTTCCAGCCCTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| 3UTR-3UTR CCA 90 bp | GATAAGGAGGGCTGGAAACAGCTAACAGCACTCCCCTGCATCATCCCTGTGAGGACTCCTTCCTTCATCTaGACTGGTCGCCAGTGGGCC | + |
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Preference number: 2 (lower is better) Translates to: DKEGWKQLTALPCIIPVRTPSFI*TGRQWA Trigger: GGCCCACTGGCGACCAGTCCAGATGAAGGAAGGAGT...CCTCACAGGGATGATGCAGGGGAGTGCTGTTAGCTGTTTCCAGCCCTCCTTATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108395.8 |
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| 3UTR-3UTR GCA 90 bp | CCTTCCAGGAGGAGGATACATTTCCAGCACTCTCATGAGGACTTGCAGGCAGCTACAGAGACCCTGGGGTaGAGGAACGTGCTCCTCAAC | + |
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Preference number: 2 (lower is better) Translates to: PSRRRIHFQHSHEDLQAATETLG*RNVLLN Trigger: GTTGAGGAGCACGTTCCTGCACCCCAGGGTCTCTGT...AGCTGCCTGCAAGTCCTCATGAGAGTGCTGGAAATGTATCCTCCTCCTGGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108395.8 |
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| 3UTR-3UTR CCA 90 bp | GATAAGGAGGGCTGGAAACAGCTAACAGCACTCCCCTGCATCATCCCTGTGAGGGGTTGTGTAGTGGTGTaGTCCCTGGTCTCCACAGCT | + |
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Preference number: 2 (lower is better) Translates to: DKEGWKQLTALPCIIPVRGCVVV*SLVSTA Trigger: AGCTGTGGAGACCAGGGACCACACCACTACACAACC...CCTCACAGGGATGATGCAGGGGAGTGCTGTTAGCTGTTTCCAGCCCTCCTTATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| 3UTR-3UTR CCA 90 bp | AGTCCTTCCAGGAGGAGGATACATTTCCAGCACTCTCATGAGGACTTGCAGGCATTGGAAGGAGCGTGCTaGAGGGGCATGGGTGTGGAC | + |
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Preference number: 2 (lower is better) Translates to: SPSRRRIHFQHSHEDLQALEGAC*RGMGVD Trigger: GTCCACACCCATGCCCCTCCAGCACGCTCCTTCCAA...TGCCTGCAAGTCCTCATGAGAGTGCTGGAAATGTATCCTCCTCCTGGAAGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| 3UTR CAA 90 bp | GACAGCCCTCTCCAAAAAGAAGCCTATGCATCAGTTGCTGTGCGGTaGTGTAGTGGTGTGGTCCCTGGTCTCCACAGCTGCCTTGATACG | + |
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Preference number: 2 (lower is better) Translates to: DSPLQKEAYASVAVR*CSGVVPGLHSCLDT Trigger: CGTATCAAGGCAGCTGTGGAGACCAGGGACCACACCACTACACAACCGCACAGCAACTGATGCATAGGCTTCTTTTTGGAGAGGGCTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| 3UTR-3UTR CCA 90 bp | ACATTTGTTGGAAGGAGCGTGCTGGAGGGGCATGGGTGTGGACGTGACTGGGGACTATGCAGCTCATGGTaGCGCATACCTGTAATTCCA | + |
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Preference number: 2 (lower is better) Translates to: TFVGRSVLEGHGCGRDWGLCSSW*RIPVIP Trigger: TGGAATTACAGGTATGCGCCACCATGAGCTGCATAG...TCCCCAGTCACGTCCACACCCATGCCCCTCCAGCACGCTCCTTCCAACAAATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGAAGCCTATGCATCAGTTGCTGTGCGGTTGTGTAGTGGTGTGGTCCCTGGTCTGGCTCCACAGATATaGGGAGCCGACAGAGACCCT | + |
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Preference number: 2 (lower is better) Translates to: KEAYASVAVRLCSGVVPGLAPQI*GADRDP Trigger: AGGGTCTCTGTCGGCTCCCCATATCTGTGGAGCCAG...ACCAGGGACCACACCACTACACAACCGCACAGCAACTGATGCATAGGCTTCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108395.8 |
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| 3UTR-3UTR CCA 90 bp | CCGAGGCGGGAGGATCACAAGTTTGAGTTCGGCTTGTGTCACCACATAACAAGAAACGTGCTCCTCAACTaGAGCTCACACCACTGGCCA | + |
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Preference number: 2 (lower is better) Translates to: PRREDHKFEFGLCHHITRNVLLN*SSHHWP Trigger: TGGCCAGTGGTGTGAGCTCCAGTTGAGGAGCACGTT...TCTTGTTATGTGGTGACACAAGCCGAACTCAAACTTGTGATCCTCCCGCCTCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108395.8 |
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| 3UTR CAA 90 bp | GTGCACAATCACAGACCAGGAAACCTTTATATTTGGGAACATTTGTaGGAAGGAGCGTGCTGGAGGGGCATGGGTGTGGACGTGACTGGG | + |
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Preference number: 2 (lower is better) Translates to: VHNHRPGNLYIWEHL*EGACWRGMGVDVTG Trigger: CCCAGTCACGTCCACACCCATGCCCCTCCAGCACGCTCCTTCCAACAAATGTTCCCAAATATAAAGGTTTCCTGGTCTGTGATTGTGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| 3UTR CAA 90 bp | CTGGGGAATAGTATGTCGTCACGGTGTGCCTCAGTGGGAAGAAGTTaGGAAGGGCCAAGATCTTGTCACATACGGTTTGGCTGTGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: LGNSMSSRCASVGRS*EGPRSCHIRFGCVD Trigger: ATCCACACAGCCAAACCGTATGTGACAAGATCTTGGCCCTTCCAAACTTCTTCCCACTGAGGCACACCGTGACGACATACTATTCCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| 3UTR-3UTR TCA 90 bp | GTGTCACCACATAACAAGATCCCCGTTTCAGACAGCCCTCTCCAAAAAGAAGCCTCTCCACAGCTGCCTTaGTACGTGGTGTGTAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: VSPHNKIPVSDSPLQKEASPQLP*YVVCSV Trigger: CACACTACACACCACGTATCAAGGCAGCTGTGGAGA...GGCTTCTTTTTGGAGAGGGCTGTCTGAAACGGGGATCTTGTTATGTGGTGACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| 3UTR-3UTR CCA 90 bp | AGTCCTTCCAGGAGGAGGATACATTTCCAGCACTCTCATGAGGACTTGCAGGCACTATGCAGCTCATGGTaGCGCATACCTGTAATTCCA | + |
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Preference number: 2 (lower is better) Translates to: SPSRRRIHFQHSHEDLQALCSSW*RIPVIP Trigger: TGGAATTACAGGTATGCGCCACCATGAGCTGCATAG...TGCCTGCAAGTCCTCATGAGAGTGCTGGAAATGTATCCTCCTCCTGGAAGGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| 3UTR CAA 90 bp | GTAGAAGGTCTGTGTGCACAATCACAGACCAGGAAACCTTTATATTaGGGAACATTTGTTGGAAGGAGCGTGCTGGAGGGGCATGGGTGT | + |
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Preference number: 2 (lower is better) Translates to: VEGLCAQSQTRKPLY*GTFVGRSVLEGHGC Trigger: ACACCCATGCCCCTCCAGCACGCTCCTTCCAACAAATGTTCCCAAATATAAAGGTTTCCTGGTCTGTGATTGTGCACACAGACCTTCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| 3UTR-3UTR TCA 90 bp | CCGTTTCAGACAGCCCTCTCCAAAAAGAAGCCTATGCATCAGTTGCTGTGCGGTTTACATGATGTAGGCTaGAAGCCTATGCAGCTCATG | + |
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Preference number: 2 (lower is better) Translates to: PFQTALSKKKPMHQLLCGLHDVG*KPMQLM Trigger: CATGAGCTGCATAGGCTTTCAGCCTACATCATGTAA...ACCGCACAGCAACTGATGCATAGGCTTCTTTTTGGAGAGGGCTGTCTGAAACGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| 3UTR-3UTR TCA 90 bp | CGGGAGGATCACAAGTTTGAGTTCGGCTTGTGTCACCACATAACAAGATCCCCGTTACATGATGTAGGCTaGAAGCCTATGCAGCTCATG | + |
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Preference number: 2 (lower is better) Translates to: REDHKFEFGLCHHITRSPLHDVG*KPMQLM Trigger: CATGAGCTGCATAGGCTTTCAGCCTACATCATGTAA...CGGGGATCTTGTTATGTGGTGACACAAGCCGAACTCAAACTTGTGATCCTCCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| 3UTR-3UTR TCA 90 bp | AAGATCCCCGTTTCAGACAGCCCTCTCCAAAAAGAAGCCTATGCATCAGTTGCTGCTGGATTAGAGTTGTaGGCATACAGAGTCGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: KIPVSDSPLQKEAYASVAAGLEL*AYRVVW Trigger: CCACACGACTCTGTATGCTCACAACTCTAATCCAGC...AGCAACTGATGCATAGGCTTCTTTTTGGAGAGGGCTGTCTGAAACGGGGATCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| 3UTR-3UTR CCA 90 bp | ACTCTCATGAGGACTTGCAGGCAGCTCAGAGATCAGAATGCGTTTGAGAGCAGGGAAACCCTTTTTCTTTaGGTCGCTGGTCCTCATTTG | + |
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Preference number: 2 (lower is better) Translates to: TLMRTCRQLRDQNAFESRETLFL*VAGPHL Trigger: CAAATGAGGACCAGCGACCCAAAGAAAAAGGGTTTC...CCTGCTCTCAAACGCATTCTGATCTCTGAGCTGCCTGCAAGTCCTCATGAGAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| 3UTR-3UTR TCA 90 bp | TATTTGGGAACATTTGTTGGAAGGAGCGTGCTGGAGGGGCATGGGTGTGGACGTATGGCCTATATTACATaGTGTAGGCTGAAAGCCTAT | + |
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Preference number: 2 (lower is better) Translates to: YLGTFVGRSVLEGHGCGRMAYIT*CRLKAY Trigger: ATAGGCTTTCAGCCTACATCATGTAATATAGGCCAT...ACGTCCACACCCATGCCCCTCCAGCACGCTCCTTCCAACAAATGTTCCCAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| 3UTR-3UTR CCA 90 bp | GTAGAAGGTCTGTGTGCACAATCACAGACCAGGAAACCTTTATATTTGGGAACAAGTCCTGAATACGGTTaGGTTGTTTGTGTGTTTGTG | + |
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Preference number: 2 (lower is better) Translates to: VEGLCAQSQTRKPLYLGTSPEYG*VVCVFV Trigger: CACAAACACACAAACAACCCAACCGTATTCAGGACT...TGTTCCCAAATATAAAGGTTTCCTGGTCTGTGATTGTGCACACAGACCTTCTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| 3UTR-3UTR CCA 90 bp | TCATTTGTAGAAGGTCTGTGTGCACAATCACAGACCAGGAAACCTTTATATTTGCAGTGGGAAGAAGTTTaGAAGGGCCAAGATCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: SFVEGLCAQSQTRKPLYLQWEEV*KGQDLV Trigger: GACAAGATCTTGGCCCTTCCAAACTTCTTCCCACTG...CAAATATAAAGGTTTCCTGGTCTGTGATTGTGCACACAGACCTTCTACAAATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| 3UTR-3UTR TCA 90 bp | TCATTTGTAGAAGGTCTGTGTGCACAATCACAGACCAGGAAACCTTTATATTTGATGGCCTATATTACATaGTGTAGGCTGAAAGCCTAT | + |
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Preference number: 2 (lower is better) Translates to: SFVEGLCAQSQTRKPLYLMAYIT*CRLKAY Trigger: ATAGGCTTTCAGCCTACATCATGTAATATAGGCCAT...CAAATATAAAGGTTTCCTGGTCTGTGATTGTGCACACAGACCTTCTACAAATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| 3UTR CCA 72 bp | GGCTCCCACCTTCCAAACTCCTTCCTTCATCTGGACTaGTCGCCAGTGGGCCAGACCCGCAGCTGGAAGTCC | + |
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Preference number: 3 (lower is better) Translates to: GSHLPNSFLHLD*SPVGQTRSWKS Trigger: GGACTTCCAGCTGCGGGTCTGGCCCACTGGCGACCAGTCCAGATGAAGGAAGGAGTTTGGAAGGTGGGAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108395.8 |
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| 3UTR CCA 72 bp | CAGAGGGCTCCCACCTTCCAAACTCCTTCCTTCATCTaGACTGGTCGCCAGTGGGCCAGACCCGCAGCTGGA | + |
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Preference number: 3 (lower is better) Translates to: QRAPTFQTPSFI*TGRQWARPAAG Trigger: TCCAGCTGCGGGTCTGGCCCACTGGCGACCAGTCCAGATGAAGGAAGGAGTTTGGAAGGTGGGAGCCCTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108395.8 |
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| 3UTR GCA 72 bp | CTCCACAGATATGGGGAGCCGACAGAGACCCTGGGGTaGAGGAACGTGCTCCTCAACTGGAGCTCACACCAC | + |
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Preference number: 3 (lower is better) Translates to: LHRYGEPTETLG*RNVLLNWSSHH Trigger: GTGGTGTGAGCTCCAGTTGAGGAGCACGTTCCTGCACCCCAGGGTCTCTGTCGGCTCCCCATATCTGTGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108395.8 |
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| 3UTR CCA 72 bp | CTGAGTCAGCTGCGGTCACATCTGGCTCCACAGATATaGGGAGCCGACAGAGACCCTGGGGTGCAGGAACGT | + |
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Preference number: 3 (lower is better) Translates to: LSQLRSHLAPQI*GADRDPGVQER Trigger: ACGTTCCTGCACCCCAGGGTCTCTGTCGGCTCCCCATATCTGTGGAGCCAGATGTGACCGCAGCTGACTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108395.8 |
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| 3UTR TCA 72 bp | TGGAAGGAGCGTGCTGGAGGGGCATGGGTGTGGACGTaGCTGGGGAATAGTATGTCGTCACGGTGTGCCTCA | + |
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Preference number: 3 (lower is better) Translates to: WKERAGGAWVWT*LGNSMSSRCAS Trigger: TGAGGCACACCGTGACGACATACTATTCCCCAGTCACGTCCACACCCATGCCCCTCCAGCACGCTCCTTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| 3UTR TCA 72 bp | AGCGAGCAGGACACCGAGGCGGGAGGATCACAAGTTTaGGTTCGGCTTGTGTCACCACATAACAAGATCCCC | + |
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Preference number: 3 (lower is better) Translates to: SEQDTEAGGSQV*VRLVSPHNKIP Trigger: GGGGATCTTGTTATGTGGTGACACAAGCCGAACTCAAACTTGTGATCCTCCCGCCTCGGTGTCCTGCTCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| 3UTR CCA 72 bp | CCTATGCATCAGTTGCTGTGCGGTTGTGTAGTGGTGTaGTCCCTGGTCTCCACAGCTGCCTTGATACGTGGT | + |
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Preference number: 3 (lower is better) Translates to: PMHQLLCGCVVV*SLVSTAALIRG Trigger: ACCACGTATCAAGGCAGCTGTGGAGACCAGGGACCACACCACTACACAACCGCACAGCAACTGATGCATAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| 3UTR-3UTR CAA 90 bp | ACATTTGTTGGAAGGAGCGTGCTGGAGGGGCATGGGTGTGGACGTGACTGGGGATCAGTGGGAAGAAGTTaGGAAGGGCCAAGATCTTGT | + |
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Preference number: 3 (lower is better) Translates to: TFVGRSVLEGHGCGRDWGSVGRS*EGPRSC Trigger: ACAAGATCTTGGCCCTTCCAAACTTCTTCCCACTGA...TCCCCAGTCACGTCCACACCCATGCCCCTCCAGCACGCTCCTTCCAACAAATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| 3UTR-3UTR CAA 90 bp | AAGGAGGGCTGGAAACAGCTAACAGCACTCCCCTGCATCATCCCTGTGAGGCCAATTTGGGAACATTTGTaGGAAGGAGCGTGCTGGAGG | + |
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Preference number: 3 (lower is better) Translates to: KEGWKQLTALPCIIPVRPIWEHL*EGACWR Trigger: CCTCCAGCACGCTCCTTCCAACAAATGTTCCCAAAT...TGGCCTCACAGGGATGATGCAGGGGAGTGCTGTTAGCTGTTTCCAGCCCTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| 3UTR CCA 72 bp | GAGGTCAGCTATGGCTTCTGTCCTGATAAGGAGGGCTaGAAACAGCTAACAGCACTCCCCTGCATCATCCCT | + |
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Preference number: 3 (lower is better) Translates to: EVSYGFCPDKEG*KQLTALPCIIP Trigger: AGGGATGATGCAGGGGAGTGCTGTTAGCTGTTTCCAGCCCTCCTTATCAGGACAGAAGCCATAGCTGACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| 3UTR CCA 72 bp | CTTGTCACATACGGTTTGGCTGTGTGGATTACTGGCTaGTGGCCGTTGATAGAGCCACTCATGAGCCTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: LVTYGLAVWITG*WPLIEPLMSLD Trigger: ATCCAGGCTCATGAGTGGCTCTATCAACGGCCACCAGCCAGTAATCCACACAGCCAAACCGTATGTGACAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| 3UTR-3UTR CAA 90 bp | CCGTTTCAGACAGCCCTCTCCAAAAAGAAGCCTATGCATCAGTTGCTGTGCGGTGGGTTGTTTGTGTGTTaGTGTAGGCAGTCGCTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: PFQTALSKKKPMHQLLCGGLFVC*CRQSLD Trigger: ATCCAGCGACTGCCTACACAAACACACAAACAACCC...ACCGCACAGCAACTGATGCATAGGCTTCTTTTTGGAGAGGGCTGTCTGAAACGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| 3UTR TCA 72 bp | GATCAGAATGCGTTTGAGAGCAGGCCCCTGATAACATaGCTGGGAAACCCTTTTTCTTTGGGTCGCTGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: DQNAFESRPLIT*LGNPFSLGRWS Trigger: GGACCAGCGACCCAAAGAAAAAGGGTTTCCCAGTCATGTTATCAGGGGCCTGCTCTCAAACGCATTCTGATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| 3UTR TCA 72 bp | TCCTTCCAGGAGGAGGATACATTTCCAGCACTCTCATaGGGACTTGCAGGCAGCTCAGAGATCAGAATGCGT | + |
|
Preference number: 3 (lower is better) Translates to: SFQEEDTFPALS*GLAGSSEIRMR Trigger: ACGCATTCTGATCTCTGAGCTGCCTGCAAGTCCTCATGAGAGTGCTGGAAATGTATCCTCCTCCTGGAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| 3UTR GCA 72 bp | AACCTTTATATTTGGGAACATTTGTTGGAAGGAGCGTaGTGGAGGGGCATGGGTGTGGACGTGACTGGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: NLYIWEHLLEGA*WRGMGVDVTGE Trigger: TTCCCCAGTCACGTCCACACCCATGCCCCTCCAGCACGCTCCTTCCAACAAATGTTCCCAAATATAAAGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| 3UTR GCA 72 bp | GGAGGAGGATACATTTCCAGCACTCTCATGAGGACTTaGAGGCAGCTCAGAGATCAGAATGCGTTTGAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: GGGYISSTLMRT*RQLRDQNAFES Trigger: GCTCTCAAACGCATTCTGATCTCTGAGCTGCCTGCAAGTCCTCATGAGAGTGCTGGAAATGTATCCTCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| 3UTR CCA 72 bp | ACAGACCAGGAAACCTTTATATTTGGGAACATTTGTTaGAAGGAGCGTGCTGGAGGGGCATGGGTGTGGACG | + |
|
Preference number: 3 (lower is better) Translates to: TDQETFIFGNIC*KERAGGAWVWT Trigger: CGTCCACACCCATGCCCCTCCAGCACGCTCCTTCCAACAAATGTTCCCAAATATAAAGGTTTCCTGGTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCAGACAGCCCTCTCCAAAAAGAAGCCTATGCATCAGTTGCTGTGCGGTTGTGGGGTTGTTTGTGTGTTaGTGTAGGCAGTCGCTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: FRQPSPKRSLCISCCAVVGLFVC*CRQSLD Trigger: ATCCAGCGACTGCCTACACAAACACACAAACAACCC...CACAACCGCACAGCAACTGATGCATAGGCTTCTTTTTGGAGAGGGCTGTCTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| 3UTR-3UTR CAA 90 bp | ACATTTGTTGGAAGGAGCGTGCTGGAGGGGCATGGGTGTGGACGTGACTGGGGAAGGAAACCTTTATATTaGGGAACATTTGTTGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: TFVGRSVLEGHGCGRDWGRKPLY*GTFVGR Trigger: CCTTCCAACAAATGTTCCCAAATATAAAGGTTTCCT...TCCCCAGTCACGTCCACACCCATGCCCCTCCAGCACGCTCCTTCCAACAAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| 3UTR CCA 72 bp | CGGTTGGGTTGTTTGTGTGTTTGTGTAGGCAGTCGCTaGATTAGAGTTGTGAGCATACAGAGTCGTGTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: RLGCLCVCVGSR*IRVVSIQSRVV Trigger: CACCACACGACTCTGTATGCTCACAACTCTAATCCAGCGACTGCCTACACAAACACACAAACAACCCAACCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTCCTTCCAGGAGGAGGATACATTTCCAGCACTCTCATGAGGACTTGCAGGCACTGAATACGGTTGGGTaGTTTGTGTGTTTGTGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: SPSRRRIHFQHSHEDLQALNTVG*FVCLCR Trigger: CCTACACAAACACACAAACAACCCAACCGTATTCAG...TGCCTGCAAGTCCTCATGAGAGTGCTGGAAATGTATCCTCCTCCTGGAAGGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| 3UTR TCA 72 bp | TGCAATTCCAGATGGCCTATATTACATGATGTAGGCTaGAAGCCTATGCAGCTCATGGTGGCGCATACCTGT | + |
|
Preference number: 3 (lower is better) Translates to: CNSRWPILHDVG*KPMQLMVAHTC Trigger: ACAGGTATGCGCCACCATGAGCTGCATAGGCTTTCAGCCTACATCATGTAATATAGGCCATCTGGAATTGCA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGGGTTGTTTGTGTGTTTGTGTAGGCAGTCGCTGGATTAGAGTTGTGAGCATAGTGTGTAGTGTGATGTaGCTTCTGAGACACCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: LGCLCVCVGSRWIRVVSIVCSVM*LLRHLL Trigger: AAGCAGGTGTCTCAGAAGCAACATCACACTACACAC...TATGCTCACAACTCTAATCCAGCGACTGCCTACACAAACACACAAACAACCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| 3UTR GCA 72 bp | TTTGGGTCGCTGGTCCTCATTTGTAGAAGGTCTGTGTaGACAATCACAGACCAGGAAACCTTTATATTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: FGSLVLICRRSV*TITDQETFIFG Trigger: CCCAAATATAAAGGTTTCCTGGTCTGTGATTGTGCACACAGACCTTCTACAAATGAGGACCAGCGACCCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| 3UTR-3UTR CAA 90 bp | TCATTTGTAGAAGGTCTGTGTGCACAATCACAGACCAGGAAACCTTTATATTTGGTGTGTAGTGTGATGTaGCTTCTGAGACACCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: SFVEGLCAQSQTRKPLYLVCSVM*LLRHLL Trigger: AAGCAGGTGTCTCAGAAGCAACATCACACTACACAC...CAAATATAAAGGTTTCCTGGTCTGTGATTGTGCACACAGACCTTCTACAAATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR GCA 90 bp | GGGGAGCCGACAGAGACCCTGGGGTGCAGGAACGTGCTCCTCAACTGGAGCTCAGCCCATGGGTACCAGTaGCAGGAGCCGCTGTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GEPTETLGCRNVLLNWSSAHGYQ*QEPLCL Trigger: GAGGCACAGCGGCTCCTGGCACTGGTACCCATGGGC...TGAGCTCCAGTTGAGGAGCACGTTCCTGCACCCCAGGGTCTCTGTCGGCTCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108395.8 |
||
| CDS-3UTR TCA 90 bp | AAGTCCACTGATGGCTGGCTTCAGGCTCAGGTCACCCGGCGGGCACGGGGTCTCACGCGCTGCTGGACTTaGGGGTATCTCAGCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KSTDGWLQAQVTRRARGLTRCWT*GYLSRS Trigger: GCTCCTGCTGAGATACCCTCAAGTCCAGCAGCGCGT...GAGACCCCGTGCCCGCCGGGTGACCTGAGCCTGAAGCCAGCCATCAGTGGACTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108395.8 |
||
| CDS-3UTR GCA 90 bp | CTGGCTTCAGGCTCAGGTCACCCGGCGGGCACGGGGTCTCCAGGGAGAAGGCTTGAGGGAAGACCTCAGTaGCCTTGGGCAGAGTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: LASGSGHPAGTGSPGRRLEGRPQ*PWAECT Trigger: GGTACACTCTGCCCAAGGGCACTGAGGTCTTCCCTC...AAGCCTTCTCCCTGGAGACCCCGTGCCCGCCGGGTGACCTGAGCCTGAAGCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108395.8 |
||
| CDS-3UTR CCA 90 bp | GGCTGGCTTCAGGCTCAGGTCACCCGGCGGGCACGGGGTCTCCAGGGAGAAGGCTCCACCGCTCCCCATTaGCAAAGAAAACTCCGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GWLQAQVTRRARGLQGEGSTAPH*QRKLRD Trigger: GTCACGGAGTTTTCTTTGCCAATGGGGAGCGGTGGA...GCCTTCTCCCTGGAGACCCCGTGCCCGCCGGGTGACCTGAGCCTGAAGCCAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108395.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGAGCCGACAGAGACCCTGGGGTGCAGGAACGTGCTCCTCAACTGGAGCTCGCCAGGGTGCCCAAGTaGTGCTGGAGCTGTGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: WGADRDPGVQERAPQLELARVPK*CWSCVW Trigger: CCACACACAGCTCCAGCACCACTTGGGCACCCTGGC...GAGCTCCAGTTGAGGAGCACGTTCCTGCACCCCAGGGTCTCTGTCGGCTCCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108395.8 |
||
| CDS-3UTR GCA 90 bp | AAGGAGGGCTGGAAACAGCTAACAGCACTCCCCTGCATCATCCCTGTGAGGCCAGCCCCGGGACGCAGCTaGAGGAGGTTCCCCAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: KEGWKQLTALPCIIPVRPAPGRS*RRFPSN Trigger: GTTGCTGGGGAACCTCCTGCAGCTGCGTCCCGGGGC...TGGCCTCACAGGGATGATGCAGGGGAGTGCTGTTAGCTGTTTCCAGCCCTCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR GCA 90 bp | ACATTTGTTGGAAGGAGCGTGCTGGAGGGGCATGGGTGTGGACGTGACTGGGGAGCCTCCACCAGACTCTaGACCTCCGCCTGGATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TFVGRSVLEGHGCGRDWGASTRL*TSAWIS Trigger: GCTGATCCAGGCGGAGGTGCAGAGTCTGGTGGAGGC...TCCCCAGTCACGTCCACACCCATGCCCCTCCAGCACGCTCCTTCCAACAAATGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR CCA 90 bp | AAGTCCACTGATGGCTGGCTTCAGGCTCAGGTCACCCGGCGGGCACGGGGTCTCGTTTGGAAGCGTCCCTaGTGTTTCTGTACCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KSTDGWLQAQVTRRARGLVWKRP*CFCTCW Trigger: CCAGCAGGTACAGAAACACCAGGGACGCTTCCAAAC...GAGACCCCGTGCCCGCCGGGTGACCTGAGCCTGAAGCCAGCCATCAGTGGACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108395.8 |
||
| CDS-3UTR CCA 90 bp | AAGTCCACTGATGGCTGGCTTCAGGCTCAGGTCACCCGGCGGGCACGGGGTCTCTGTTTCTGTACCTGCTaGATAGTGAAGGCAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KSTDGWLQAQVTRRARGLCFCTC*IVKAAR Trigger: CCTGGCTGCCTTCACTATCCAGCAGGTACAGAAACA...GAGACCCCGTGCCCGCCGGGTGACCTGAGCCTGAAGCCAGCCATCAGTGGACTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108395.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGAGCCGACAGAGACCCTGGGGTGCAGGAACGTGCTCCTCAACTGGAGCTCAACTCTCCTGGGTTCTaGAAAACCGCAGGGTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: WGADRDPGVQERAPQLELNSPGF*KTAGSC Trigger: GCATGACCCTGCGGTTTTCCAGAACCCAGGAGAGTT...GAGCTCCAGTTGAGGAGCACGTTCCTGCACCCCAGGGTCTCTGTCGGCTCCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108395.8 |
||
| CDS-3UTR TCA 90 bp | GGAGGGCTGGAAACAGCTAACAGCACTCCCCTGCATCATCCCTGTGAGGCCAGTATCACGTGCAGGACCTaGGGTTTGGAAGCGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GGLETANSTPLHHPCEASITCRT*GLEASL Trigger: CAGGGACGCTTCCAAACCTCAGGTCCTGCACGTGAT...ACTGGCCTCACAGGGATGATGCAGGGGAGTGCTGTTAGCTGTTTCCAGCCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR GCA 90 bp | ACTCTCATGAGGACTTGCAGGCAGCTCAGAGATCAGAATGCGTTTGAGAGCAGGGCCCCGGGACGCAGCTaGAGGAGGTTCCCCAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: TLMRTCRQLRDQNAFESRAPGRS*RRFPSN Trigger: GTTGCTGGGGAACCTCCTGCAGCTGCGTCCCGGGGC...CCTGCTCTCAAACGCATTCTGATCTCTGAGCTGCCTGCAAGTCCTCATGAGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR GCA 90 bp | TATGGCTTCTGTCCTGATAAGGAGGGCTGGAAACAGCTAACAGCACTCCCCTGCGCCCATGGGTACCAGTaGCAGGAGCCGCTGTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: YGFCPDKEGWKQLTALPCAHGYQ*QEPLCL Trigger: GAGGCACAGCGGCTCCTGGCACTGGTACCCATGGGC...GCAGGGGAGTGCTGTTAGCTGTTTCCAGCCCTCCTTATCAGGACAGAAGCCATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR CCA 90 bp | ACATTTGTTGGAAGGAGCGTGCTGGAGGGGCATGGGTGTGGACGTGACTGGGGAACATTAGAGGTGGCCTaGGCCAGCAGCATGGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TFVGRSVLEGHGCGRDWGTLEVA*ASSMEG Trigger: CCCTTCCATGCTGCTGGCCCAGGCCACCTCTAATGT...TCCCCAGTCACGTCCACACCCATGCCCCTCCAGCACGCTCCTTCCAACAAATGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR TCA 90 bp | GATAAGGAGGGCTGGAAACAGCTAACAGCACTCCCCTGCATCATCCCTGTGAGGACGCGCTGCTGGACTTaGGGGTATCTCAGCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: DKEGWKQLTALPCIIPVRTRCWT*GYLSRS Trigger: GCTCCTGCTGAGATACCCTCAAGTCCAGCAGCGCGT...CCTCACAGGGATGATGCAGGGGAGTGCTGTTAGCTGTTTCCAGCCCTCCTTATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR GCA 90 bp | TATTTGGGAACATTTGTTGGAAGGAGCGTGCTGGAGGGGCATGGGTGTGGACGTCCTCGCCTTCTCGCTTaGCCATGCCCAGGTCCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: YLGTFVGRSVLEGHGCGRPRLLA*PCPGPV Trigger: TACGGGACCTGGGCATGGGCAAGCGAGAAGGCGAGG...ACGTCCACACCCATGCCCCTCCAGCACGCTCCTTCCAACAAATGTTCCCAAATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR CCA 90 bp | TATTTGGGAACATTTGTTGGAAGGAGCGTGCTGGAGGGGCATGGGTGTGGACGTTGTGGGGCATGCCCATaGGTACCAGTGCCAGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: YLGTFVGRSVLEGHGCGRCGACP*VPVPGA Trigger: GGCTCCTGGCACTGGTACCCATGGGCATGCCCCACA...ACGTCCACACCCATGCCCCTCCAGCACGCTCCTTCCAACAAATGTTCCCAAATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR GCA 90 bp | AGTCCTTCCAGGAGGAGGATACATTTCCAGCACTCTCATGAGGACTTGCAGGCACCTCGCCTTCTCGCTTaGCCATGCCCAGGTCCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: SPSRRRIHFQHSHEDLQAPRLLA*PCPGPV Trigger: TACGGGACCTGGGCATGGGCAAGCGAGAAGGCGAGG...TGCCTGCAAGTCCTCATGAGAGTGCTGGAAATGTATCCTCCTCCTGGAAGGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR GCA 90 bp | AGTCGTGTGGTGGACAGCGGGGTATCTAGCTATATGCTTGCAATTCCAGATGGCAGGGTGCCCAAGTGGTaGTGGAGCTGTGTGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SRVVDSGVSSYMLAIPDGRVPKW*WSCVWG Trigger: CCCCCACACACAGCTCCAGCACCACTTGGGCACCCT...GCCATCTGGAATTGCAAGCATATAGCTAGATACCCCGCTGTCCACCACACGACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR CCA 90 bp | GAGTTCGGCTTGTGTCACCACATAACAAGATCCCCGTTTCAGACAGCCCTCTCCCTCTGCACCTCCGCCTaGATCAGCTCCTCGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EFGLCHHITRSPFQTALSLCTSA*ISSSPS Trigger: AGAAGGCGAGGAGCTGATCCAGGCGGAGGTGCAGAG...GGAGAGGGCTGTCTGAAACGGGGATCTTGTTATGTGGTGACACAAGCCGAACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR CCA 90 bp | TGTCACATACGGTTTGGCTGTGTGGATTACTGGCTGGTGGCCGTTGATAGAGCCGGGCATAGCGGATGGTaGCACCGATGGTCATGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CHIRFGCVDYWLVAVDRAGHSGW*HRWSWS Trigger: GGACCATGACCATCGGTGCCACCATCCGCTATGCCC...GGCTCTATCAACGGCCACCAGCCAGTAATCCACACAGCCAAACCGTATGTGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR CCA 90 bp | GAGTTCGGCTTGTGTCACCACATAACAAGATCCCCGTTTCAGACAGCCCTCTCCGGGCATAGCGGATGGTaGCACCGATGGTCATGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: EFGLCHHITRSPFQTALSGHSGW*HRWSWS Trigger: GGACCATGACCATCGGTGCCACCATCCGCTATGCCC...GGAGAGGGCTGTCTGAAACGGGGATCTTGTTATGTGGTGACACAAGCCGAACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR TCA 90 bp | TTGTGTAGTGGTGTGGTCCCTGGTCTCCACAGCTGCCTTGATACGTGGTGTGTAATGTTCCACGCCCGCTaGATTCCTCAGCCTGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: LCSGVVPGLHSCLDTWCVMFHAR*IPQPDL Trigger: GAGGTCAGGCTGAGGAATTCAGCGGGCGTGGAACAT...TACACACCACGTATCAAGGCAGCTGTGGAGACCAGGGACCACACCACTACACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR CCA 90 bp | CCGAGGCGGGAGGATCACAAGTTTGAGTTCGGCTTGTGTCACCACATAACAAGACTCTGCACCTCCGCCTaGATCAGCTCCTCGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PRREDHKFEFGLCHHITRLCTSA*ISSSPS Trigger: AGAAGGCGAGGAGCTGATCCAGGCGGAGGTGCAGAG...TCTTGTTATGTGGTGACACAAGCCGAACTCAAACTTGTGATCCTCCCGCCTCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR CCA 90 bp | TCCAAACTCCTTCCTTCATCTGGACTGGTCGCCAGTGGGCCAGACCCGCAGCTGGGTGAATTCTGTACCTaGGTCTTGTTTCTCCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SKLLPSSGLVASGPDPQLGEFCT*VLFLLC Trigger: GCACAGGAGAAACAAGACCCAGGTACAGAATTCACC...CAGCTGCGGGTCTGGCCCACTGGCGACCAGTCCAGATGAAGGAAGGAGTTTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108395.8 |
||
| CDS-3UTR CCA 90 bp | AGTCCTTCCAGGAGGAGGATACATTTCCAGCACTCTCATGAGGACTTGCAGGCATCGATCGCTGAGACTTaGAGCCCTGCCAGGACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPSRRRIHFQHSHEDLQASIAET*SPARTQ Trigger: CTGGGTCCTGGCAGGGCTCCAAGTCTCAGCGATCGA...TGCCTGCAAGTCCTCATGAGAGTGCTGGAAATGTATCCTCCTCCTGGAAGGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR CCA 90 bp | TTCAGACAGCCCTCTCCAAAAAGAAGCCTATGCATCAGTTGCTGTGCGGTTGTGTGTGGGGCATGCCCATaGGTACCAGTGCCAGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FRQPSPKRSLCISCCAVVCGACP*VPVPGA Trigger: GGCTCCTGGCACTGGTACCCATGGGCATGCCCCACA...CACAACCGCACAGCAACTGATGCATAGGCTTCTTTTTGGAGAGGGCTGTCTGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| 3UTR CAA 72 bp | TACGGTTTGGCTGTGTGGATTACTGGCTGGTGGCCGTaGATAGAGCCACTCATGAGCCTGGATGGTGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YGLAVWITGWWP*IEPLMSLDGGE Trigger: CTCACCACCATCCAGGCTCATGAGTGGCTCTATCAACGGCCACCAGCCAGTAATCCACACAGCCAAACCGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR TCA 90 bp | CTCATGAGCCTGGATGGTGGTGAGGTCATCCATGGGAGTAGACAGAACATCGTTATGTTCCACGCCCGCTaGATTCCTCAGCCTGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: LMSLDGGEVIHGSRQNIVMFHAR*IPQPDL Trigger: GAGGTCAGGCTGAGGAATTCAGCGGGCGTGGAACAT...AACGATGTTCTGTCTACTCCCATGGATGACCTCACCACCATCCAGGCTCATGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR TCA 90 bp | AAAGAAGCCTATGCATCAGTTGCTGTGCGGTTGTGTAGTGGTGTGGTCCCTGGTATCACGTGCAGGACCTaGGGTTTGGAAGCGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KEAYASVAVRLCSGVVPGITCRT*GLEASL Trigger: CAGGGACGCTTCCAAACCTCAGGTCCTGCACGTGAT...ACCAGGGACCACACCACTACACAACCGCACAGCAACTGATGCATAGGCTTCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR CCA 90 bp | GATAAGGAGGGCTGGAAACAGCTAACAGCACTCCCCTGCATCATCCCTGTGAGGTCCACCGCTCCCCATTaGCAAAGAAAACTCCGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: DKEGWKQLTALPCIIPVRSTAPH*QRKLRD Trigger: GTCACGGAGTTTTCTTTGCCAATGGGGAGCGGTGGA...CCTCACAGGGATGATGCAGGGGAGTGCTGTTAGCTGTTTCCAGCCCTCCTTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR CCA 90 bp | GAGTTCGGCTTGTGTCACCACATAACAAGATCCCCGTTTCAGACAGCCCTCTCCGCAGGACCTGAGGTTTaGAAGCGTCCCTGGTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EFGLCHHITRSPFQTALSAGPEV*KRPWCF Trigger: GAAACACCAGGGACGCTTCCAAACCTCAGGTCCTGC...GGAGAGGGCTGTCTGAAACGGGGATCTTGTTATGTGGTGACACAAGCCGAACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| 3UTR CAA 72 bp | CTCCAAAAAGAAGCCTATGCATCAGTTGCTGTGCGGTaGTGTAGTGGTGTGGTCCCTGGTCTCCACAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LQKEAYASVAVR*CSGVVPGLHSC Trigger: GCAGCTGTGGAGACCAGGGACCACACCACTACACAACCGCACAGCAACTGATGCATAGGCTTCTTTTTGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| 3UTR CAA 72 bp | CAGACAGCCCTCTCCAAAAAGAAGCCTATGCATCAGTaGCTGTGCGGTTGTGTAGTGGTGTGGTCCCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QTALSKKKPMHQ*LCGCVVVWSLV Trigger: GACCAGGGACCACACCACTACACAACCGCACAGCAACTGATGCATAGGCTTCTTTTTGGAGAGGGCTGTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR CCA 90 bp | TATTTGGGAACATTTGTTGGAAGGAGCGTGCTGGAGGGGCATGGGTGTGGACGTGTACCACTTGCTGCCTaGATCACAGCCTGGAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: YLGTFVGRSVLEGHGCGRVPLAA*ITAWNS Trigger: AGAGTTCCAGGCTGTGATCCAGGCAGCAAGTGGTAC...ACGTCCACACCCATGCCCCTCCAGCACGCTCCTTCCAACAAATGTTCCCAAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR CCA 90 bp | TTAAGAGTCCTGAATACGGTTGGGTTGTTTGTGTGTTTGTGTAGGCAGTCGCTGGTGCCCAAGTGGTGCTaGAGCTGTGTGTGGGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LRVLNTVGLFVCLCRQSLVPKWC*SCVWGP Trigger: AGGCCCCCACACACAGCTCCAGCACCACTTGGGCAC...CAGCGACTGCCTACACAAACACACAAACAACCCAACCGTATTCAGGACTCTTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR CCA 90 bp | ATGACTGGGAAACCCTTTTTCTTTGGGTCGCTGGTCCTCATTTGTAGAAGGTCTGTGCCCAAGTGGTGCTaGAGCTGTGTGTGGGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: MTGKPFFFGSLVLICRRSVPKWC*SCVWGP Trigger: AGGCCCCCACACACAGCTCCAGCACCACTTGGGCAC...AGACCTTCTACAAATGAGGACCAGCGACCCAAAGAAAAAGGGTTTCCCAGTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR CCA 90 bp | GATCACAAGTTTGAGTTCGGCTTGTGTCACCACATAACAAGATCCCCGTTTCAGGCCAGGGTGCCCAAGTaGTGCTGGAGCTGTGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DHKFEFGLCHHITRSPFQARVPK*CWSCVW Trigger: CCACACACAGCTCCAGCACCACTTGGGCACCCTGGC...CTGAAACGGGGATCTTGTTATGTGGTGACACAAGCCGAACTCAAACTTGTGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR CCA 90 bp | CGGGAGGATCACAAGTTTGAGTTCGGCTTGTGTCACCACATAACAAGATCCCCGGCAGGACCTGAGGTTTaGAAGCGTCCCTGGTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: REDHKFEFGLCHHITRSPAGPEV*KRPWCF Trigger: GAAACACCAGGGACGCTTCCAAACCTCAGGTCCTGC...CGGGGATCTTGTTATGTGGTGACACAAGCCGAACTCAAACTTGTGATCCTCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTCACACACACCCTGAGTAAGGCTCTTTCAGCCCAGAGGGCTCCCACCTTCGGTGAATTCTGTACCTaGGTCTTGTTTCTCCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: CFTHTLSKALSAQRAPTFGEFCT*VLFLLC Trigger: GCACAGGAGAAACAAGACCCAGGTACAGAATTCACC...GAAGGTGGGAGCCCTCTGGGCTGAAAGAGCCTTACTCAGGGTGTGTGTGAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR TCA 90 bp | ACTCTCATGAGGACTTGCAGGCAGCTCAGAGATCAGAATGCGTTTGAGAGCAGGGTAGAGCGAGCAGGGTaGATTTCCTCAGCTGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLMRTCRQLRDQNAFESRVERAG*ISSAVS Trigger: GGAAACAGCTGAGGAAATTCACCCTGCTCGCTCTAC...CCTGCTCTCAAACGCATTCTGATCTCTGAGCTGCCTGCAAGTCCTCATGAGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR GCA 90 bp | AAGATCCCCGTTTCAGACAGCCCTCTCCAAAAAGAAGCCTATGCATCAGTTGCTGAGGGAAGACCTCAGTaGCCTTGGGCAGAGTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: KIPVSDSPLQKEAYASVAEGRPQ*PWAECT Trigger: GGTACACTCTGCCCAAGGGCACTGAGGTCTTCCCTC...AGCAACTGATGCATAGGCTTCTTTTTGGAGAGGGCTGTCTGAAACGGGGATCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR CCA 90 bp | CAAGTCACAAAGAGGTCAGCTATGGCTTCTGTCCTGATAAGGAGGGCTGGAAACGGATGGTGGCACCGATaGTCATGGTCCCAGCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: QVTKRSAMASVLIRRAGNGWWHR*SWSQQT Trigger: TGTTTGCTGGGACCATGACCATCGGTGCCACCATCC...GTTTCCAGCCCTCCTTATCAGGACAGAAGCCATAGCTGACCTCTTTGTGACTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR CCA 90 bp | TTAAGAGTCCTGAATACGGTTGGGTTGTTTGTGTGTTTGTGTAGGCAGTCGCTGTCGATCGCTGAGACTTaGAGCCCTGCCAGGACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LRVLNTVGLFVCLCRQSLSIAET*SPARTQ Trigger: CTGGGTCCTGGCAGGGCTCCAAGTCTCAGCGATCGA...CAGCGACTGCCTACACAAACACACAAACAACCCAACCGTATTCAGGACTCTTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR GCA 90 bp | TATGGCTTCTGTCCTGATAAGGAGGGCTGGAAACAGCTAACAGCACTCCCCTGCAAAACCGCAGGGTCATaGAGTATGGAGCCAATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: YGFCPDKEGWKQLTALPCKTAGS*SMEPIR Trigger: TCTGATTGGCTCCATACTGCATGACCCTGCGGTTTT...GCAGGGGAGTGCTGTTAGCTGTTTCCAGCCCTCCTTATCAGGACAGAAGCCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR CCA 90 bp | GATCACAAGTTTGAGTTCGGCTTGTGTCACCACATAACAAGATCCCCGTTTCAGACATTAGAGGTGGCCTaGGCCAGCAGCATGGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: DHKFEFGLCHHITRSPFQTLEVA*ASSMEG Trigger: CCCTTCCATGCTGCTGGCCCAGGCCACCTCTAATGT...CTGAAACGGGGATCTTGTTATGTGGTGACACAAGCCGAACTCAAACTTGTGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR CCA 90 bp | CAAGTCACAAAGAGGTCAGCTATGGCTTCTGTCCTGATAAGGAGGGCTGGAAACGTACCACTTGCTGCCTaGATCACAGCCTGGAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: QVTKRSAMASVLIRRAGNVPLAA*ITAWNS Trigger: AGAGTTCCAGGCTGTGATCCAGGCAGCAAGTGGTAC...GTTTCCAGCCCTCCTTATCAGGACAGAAGCCATAGCTGACCTCTTTGTGACTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR CCA 90 bp | AAGATCCCCGTTTCAGACAGCCCTCTCCAAAAAGAAGCCTATGCATCAGTTGCTTGGCACCGATGGTCATaGTCCCAGCAAACAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KIPVSDSPLQKEAYASVAWHRWS*SQQTAG Trigger: ACCTGCTGTTTGCTGGGACCATGACCATCGGTGCCA...AGCAACTGATGCATAGGCTTCTTTTTGGAGAGGGCTGTCTGAAACGGGGATCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR CCA 90 bp | AAGATCCCCGTTTCAGACAGCCCTCTCCAAAAAGAAGCCTATGCATCAGTTGCTAAGTCCACTGATGGCTaGCTTCAGGCTCAGGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: KIPVSDSPLQKEAYASVAKSTDG*LQAQVT Trigger: GGTGACCTGAGCCTGAAGCCAGCCATCAGTGGACTT...AGCAACTGATGCATAGGCTTCTTTTTGGAGAGGGCTGTCTGAAACGGGGATCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043314.10 |
||
| 3UTR CAA 72 bp | AGTATGTCGTCACGGTGTGCCTCAGTGGGAAGAAGTTaGGAAGGGCCAAGATCTTGTCACATACGGTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SMSSRCASVGRS*EGPRSCHIRFG Trigger: GCCAAACCGTATGTGACAAGATCTTGGCCCTTCCAAACTTCTTCCCACTGAGGCACACCGTGACGACATACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR TCA 90 bp | CTCATGAGCCTGGATGGTGGTGAGGTCATCCATGGGAGTAGACAGAACATCGTTGCAAAGAAAACTCCGTaGCCATCAAAGGTCTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LMSLDGGEVIHGSRQNIVAKKTP*PSKVLS Trigger: GGACAAGACCTTTGATGGTCACGGAGTTTTCTTTGC...AACGATGTTCTGTCTACTCCCATGGATGACCTCACCACCATCCAGGCTCATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR GCA 90 bp | AGTCGTGTGGTGGACAGCGGGGTATCTAGCTATATGCTTGCAATTCCAGATGGCCATAGGGCAAACGGATaGCAAAGACAAGGGAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SRVVDSGVSSYMLAIPDGHRANG*QRQGNR Trigger: TCTGTTCCCTTGTCTTTGGCATCCGTTTGCCCTATG...GCCATCTGGAATTGCAAGCATATAGCTAGATACCCCGCTGTCCACCACACGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR GCA 90 bp | AGTCCTTCCAGGAGGAGGATACATTTCCAGCACTCTCATGAGGACTTGCAGGCACATAGGGCAAACGGATaGCAAAGACAAGGGAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SPSRRRIHFQHSHEDLQAHRANG*QRQGNR Trigger: TCTGTTCCCTTGTCTTTGGCATCCGTTTGCCCTATG...TGCCTGCAAGTCCTCATGAGAGTGCTGGAAATGTATCCTCCTCCTGGAAGGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR CCA 90 bp | CACATAACAAGATCCCCGTTTCAGACAGCCCTCTCCAAAAAGAAGCCTATGCATTGGCACCGATGGTCATaGTCCCAGCAAACAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HITRSPFQTALSKKKPMHWHRWS*SQQTAG Trigger: ACCTGCTGTTTGCTGGGACCATGACCATCGGTGCCA...ATGCATAGGCTTCTTTTTGGAGAGGGCTGTCTGAAACGGGGATCTTGTTATGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR CCA 90 bp | AAGATCCCCGTTTCAGACAGCCCTCTCCAAAAAGAAGCCTATGCATCAGTTGCTTGGATGGAACTCTCCTaGGTTCTGGAAAACCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KIPVSDSPLQKEAYASVAWMELS*VLENRR Trigger: CCTGCGGTTTTCCAGAACCCAGGAGAGTTCCATCCA...AGCAACTGATGCATAGGCTTCTTTTTGGAGAGGGCTGTCTGAAACGGGGATCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| 3UTR CAA 72 bp | GAAGTTTGGAAGGGCCAAGATCTTGTCACATACGGTTaGGCTGTGTGGATTACTGGCTGGTGGCCGTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: EVWKGQDLVTYG*AVWITGWWPLI Trigger: TATCAACGGCCACCAGCCAGTAATCCACACAGCCAAACCGTATGTGACAAGATCTTGGCCCTTCCAAACTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR TCA 90 bp | CCTTTATATTTGGGAACATTTGTTGGAAGGAGCGTGCTGGAGGGGCATGGGTGTCTTGCAAGATGGAAGTaGAGAAAAGCCACAACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: PLYLGTFVGRSVLEGHGCLARWK*RKATTP Trigger: CGGAGTTGTGGCTTTTCTTCACTTCCATCTTGCAAG...ACACCCATGCCCCTCCAGCACGCTCCTTCCAACAAATGTTCCCAAATATAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043314.10 |
||
| CDS-3UTR GCA 90 bp | TCATTTGTAGAAGGTCTGTGTGCACAATCACAGACCAGGAAACCTTTATATTTGAGGGTGCCCAAGTGGTaGTGGAGCTGTGTGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SFVEGLCAQSQTRKPLYLRVPKW*WSCVWG Trigger: CCCCCACACACAGCTCCAGCACCACTTGGGCACCCT...CAAATATAAAGGTTTCCTGGTCTGTGATTGTGCACACAGACCTTCTACAAATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR CCA 90 bp | CACATAACAAGATCCCCGTTTCAGACAGCCCTCTCCAAAAAGAAGCCTATGCATCGTCCTTCTGTCTTCTaGAAAGCCTCCACCAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: HITRSPFQTALSKKKPMHRPSVF*KASTRL Trigger: GAGTCTGGTGGAGGCTTTCCAGAAGACAGAAGGACG...ATGCATAGGCTTCTTTTTGGAGAGGGCTGTCTGAAACGGGGATCTTGTTATGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| 3UTR CAA 72 bp | AATCACAGACCAGGAAACCTTTATATTTGGGAACATTaGTTGGAAGGAGCGTGCTGGAGGGGCATGGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: NHRPGNLYIWEH*LEGACWRGMGV Trigger: CACACCCATGCCCCTCCAGCACGCTCCTTCCAACAAATGTTCCCAAATATAAAGGTTTCCTGGTCTGTGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR CCA 90 bp | CACATAACAAGATCCCCGTTTCAGACAGCCCTCTCCAAAAAGAAGCCTATGCATTGTTTCTGTACCTGCTaGATAGTGAAGGCAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HITRSPFQTALSKKKPMHCFCTC*IVKAAR Trigger: CCTGGCTGCCTTCACTATCCAGCAGGTACAGAAACA...ATGCATAGGCTTCTTTTTGGAGAGGGCTGTCTGAAACGGGGATCTTGTTATGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR CCA 90 bp | GTAGAAGGTCTGTGTGCACAATCACAGACCAGGAAACCTTTATATTTGGGAACAGGATGGTGGCACCGATaGTCATGGTCCCAGCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: VEGLCAQSQTRKPLYLGTGWWHR*SWSQQT Trigger: TGTTTGCTGGGACCATGACCATCGGTGCCACCATCC...TGTTCCCAAATATAAAGGTTTCCTGGTCTGTGATTGTGCACACAGACCTTCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR CCA 90 bp | TTGGGTTGTTTGTGTGTTTGTGTAGGCAGTCGCTGGATTAGAGTTGTGAGCATATGGATGGAACTCTCCTaGGTTCTGGAAAACCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LGCLCVCVGSRWIRVVSIWMELS*VLENRR Trigger: CCTGCGGTTTTCCAGAACCCAGGAGAGTTCCATCCA...TATGCTCACAACTCTAATCCAGCGACTGCCTACACAAACACACAAACAACCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR GCA 90 bp | CACATAACAAGATCCCCGTTTCAGACAGCCCTCTCCAAAAAGAAGCCTATGCATAAAACCGCAGGGTCATaGAGTATGGAGCCAATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HITRSPFQTALSKKKPMHKTAGS*SMEPIR Trigger: TCTGATTGGCTCCATACTGCATGACCCTGCGGTTTT...ATGCATAGGCTTCTTTTTGGAGAGGGCTGTCTGAAACGGGGATCTTGTTATGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR CCA 90 bp | AGCGGGGTATCTAGCTATATGCTTGCAATTCCAGATGGCCTATATTACATGATGGTTTGGAAGCGTCCCTaGTGTTTCTGTACCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SGVSSYMLAIPDGLYYMMVWKRP*CFCTCW Trigger: CCAGCAGGTACAGAAACACCAGGGACGCTTCCAAAC...CATCATGTAATATAGGCCATCTGGAATTGCAAGCATATAGCTAGATACCCCGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR CCA 90 bp | AGCGGGGTATCTAGCTATATGCTTGCAATTCCAGATGGCCTATATTACATGATGAACTCTCCTGGGTTCTaGAAAACCGCAGGGTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: SGVSSYMLAIPDGLYYMMNSPGF*KTAGSC Trigger: GCATGACCCTGCGGTTTTCCAGAACCCAGGAGAGTT...CATCATGTAATATAGGCCATCTGGAATTGCAAGCATATAGCTAGATACCCCGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR TCA 90 bp | AGCGGGGTATCTAGCTATATGCTTGCAATTCCAGATGGCCTATATTACATGATGGCAAAGAAAACTCCGTaGCCATCAAAGGTCTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SGVSSYMLAIPDGLYYMMAKKTP*PSKVLS Trigger: GGACAAGACCTTTGATGGTCACGGAGTTTTCTTTGC...CATCATGTAATATAGGCCATCTGGAATTGCAAGCATATAGCTAGATACCCCGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR CAA 90 bp | CTGGCTTCAGGCTCAGGTCACCCGGCGGGCACGGGGTCTCCAGGGAGAAGGCTTTCCTCGCCTTCTCGCTaGCCCATGCCCAGGTCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: LASGSGHPAGTGSPGRRLSSPSR*PMPRSR Trigger: ACGGGACCTGGGCATGGGCAAGCGAGAAGGCGAGGA...AAGCCTTCTCCCTGGAGACCCCGTGCCCGCCGGGTGACCTGAGCCTGAAGCCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108395.8 |
||
| CDS CCA 90 bp | TTGGGCAGAGTGTACCCTCGGAAGCAAGTGGTCCTCGTGATGGTGTaGGGCATGCCCATGGGTACCAGTGCCAGGAGCCGCTGTGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LGRVYPRKQVVLVMV*GMPMGTSARSRCAS Trigger: CGAGGCACAGCGGCTCCTGGCACTGGTACCCATGGGCATGCCCCACACCATCACGAGGACCACTTGCTTCCGAGGGTACACTCTGCCCAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR CAA 90 bp | ACATTTGTTGGAAGGAGCGTGCTGGAGGGGCATGGGTGTGGACGTGACTGGGGATCCTCGCCTTCTCGCTaGCCCATGCCCAGGTCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: TFVGRSVLEGHGCGRDWGSSPSR*PMPRSR Trigger: ACGGGACCTGGGCATGGGCAAGCGAGAAGGCGAGGA...TCCCCAGTCACGTCCACACCCATGCCCCTCCAGCACGCTCCTTCCAACAAATGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS-3UTR CAA 90 bp | CTGGCTTCAGGCTCAGGTCACCCGGCGGGCACGGGGTCTCCAGGGAGAAGGCTTAGCAGCATGGAAGGGTaGAATGGACGTCCTTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LASGSGHPAGTGSPGRRLSSMEG*NGRPSV Trigger: GACAGAAGGACGTCCATTCAACCCTTCCATGCTGCT...AAGCCTTCTCCCTGGAGACCCCGTGCCCGCCGGGTGACCTGAGCCTGAAGCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108395.8 |
||
| CDS GCA 90 bp | CGTGCAGGACCTGAGGTTTGGAAGCGTCCCTGGTGTTTCTGTACCTaGTGGATAGTGAAGGCAGCCAGGGTGCCCAAGTGGTGCTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RAGPEVWKRPWCFCT*WIVKAARVPKWCWS Trigger: GCTCCAGCACCACTTGGGCACCCTGGCTGCCTTCACTATCCAGCAGGTACAGAAACACCAGGGACGCTTCCAAACCTCAGGTCCTGCACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS GCA 90 bp | CGGCCTGGATGGAACTCTCCTGGGTTCTGGAAAACCGCAGGGTCATaGAGTATGGAGCCAATCAGAGGGAAGACCTCAGTGCCCTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RPGWNSPGFWKTAGS*SMEPIRGKTSVPLG Trigger: GCCCAAGGGCACTGAGGTCTTCCCTCTGATTGGCTCCATACTGCATGACCCTGCGGTTTTCCAGAACCCAGGAGAGTTCCATCCAGGCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
||
| CDS CCA 90 bp | GCAGGACCTGAGGTTTGGAAGCGTCCCTGGTGTTTCTGTACCTGCTaGATAGTGAAGGCAGCCAGGGTGCCCAAGTGGTGCTGGAGCTGT | + |
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Preference number: 5 (lower is better) Translates to: AGPEVWKRPWCFCTC*IVKAARVPKWCWSC Trigger: ACAGCTCCAGCACCACTTGGGCACCCTGGCTGCCTTCACTATCCAGCAGGTACAGAAACACCAGGGACGCTTCCAAACCTCAGGTCCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| CDS CCA 90 bp | GCGTCAACGACATCACGTGCAGGACCTGAGGTTTGGAAGCGTCCCTaGTGTTTCTGTACCTGCTGGATAGTGAAGGCAGCCAGGGTGCCC | + |
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Preference number: 5 (lower is better) Translates to: ASTTSRAGPEVWKRP*CFCTCWIVKAARVP Trigger: GGGCACCCTGGCTGCCTTCACTATCCAGCAGGTACAGAAACACCAGGGACGCTTCCAAACCTCAGGTCCTGCACGTGATGTCGTTGACGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| CDS TCA 90 bp | CGCCTTCTCGCTTGCCCATGCCCAGGTCCCGTAGAGCGAGCAGGGTaGATTTCCTCAGCTGTTTCCACCGCTCCCCATTGGCAAAGAAAA | + |
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Preference number: 5 (lower is better) Translates to: RLLACPCPGPVERAG*ISSAVSTAPHWQRK Trigger: TTTTCTTTGCCAATGGGGAGCGGTGGAAACAGCTGAGGAAATTCACCCTGCTCGCTCTACGGGACCTGGGCATGGGCAAGCGAGAAGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| CDS CCA 90 bp | CCATCTTCGTCCAGGAAGCGGCCTGGATGGAACTCTCCTGGGTTCTaGAAAACCGCAGGGTCATGCAGTATGGAGCCAATCAGAGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: PSSSRKRPGWNSPGF*KTAGSCSMEPIRGK Trigger: CTTCCCTCTGATTGGCTCCATACTGCATGACCCTGCGGTTTTCCAGAACCCAGGAGAGTTCCATCCAGGCCGCTTCCTGGACGAAGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| CDS CCA 90 bp | GGCTTCGTGTTTTCTCAACCGACCATCTTCGTCCAGGAAGCGGCCTaGATGGAACTCTCCTGGGTTCTGGAAAACCGCAGGGTCATGCAG | + |
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Preference number: 5 (lower is better) Translates to: GFVFSQPTIFVQEAA*MELSWVLENRRVMQ Trigger: CTGCATGACCCTGCGGTTTTCCAGAACCCAGGAGAGTTCCATCCAGGCCGCTTCCTGGACGAAGATGGTCGGTTGAGAAAACACGAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| CDS CCA 90 bp | GATGGAACTCTCCTGGGTTCTGGAAAACCGCAGGGTCATGCAGTATaGAGCCAATCAGAGGGAAGACCTCAGTGCCCTTGGGCAGAGTGT | + |
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Preference number: 5 (lower is better) Translates to: DGTLLGSGKPQGHAV*SQSEGRPQCPWAEC Trigger: ACACTCTGCCCAAGGGCACTGAGGTCTTCCCTCTGATTGGCTCCATACTGCATGACCCTGCGGTTTTCCAGAACCCAGGAGAGTTCCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| CDS CCA 90 bp | TCGTGTTTTCTCAACCGACCATCTTCGTCCAGGAAGCGGCCTGGATaGAACTCTCCTGGGTTCTGGAAAACCGCAGGGTCATGCAGTATG | + |
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Preference number: 5 (lower is better) Translates to: SCFLNRPSSSRKRPG*NSPGFWKTAGSCSM Trigger: CATACTGCATGACCCTGCGGTTTTCCAGAACCCAGGAGAGTTCCATCCAGGCCGCTTCCTGGACGAAGATGGTCGGTTGAGAAAACACGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| CDS-3UTR CAA 90 bp | CAAGTCACAAAGAGGTCAGCTATGGCTTCTGTCCTGATAAGGAGGGCTGGAAACAAGACCTCAGTGCCCTaGGGCAGAGTGTACCCTCGG | + |
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Preference number: 5 (lower is better) Translates to: QVTKRSAMASVLIRRAGNKTSVP*GRVYPR Trigger: CCGAGGGTACACTCTGCCCAAGGGCACTGAGGTCTT...GTTTCCAGCCCTCCTTATCAGGACAGAAGCCATAGCTGACCTCTTTGTGACTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| CDS TCA 90 bp | GACCATCAAAGGTCTTGTCCAGCGTTGCCAATGTTCCACGCCCGCTaGATTCCTCAGCCTGACCTCCCAAGGCTTCTCTTACAGCATCAT | + |
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Preference number: 5 (lower is better) Translates to: DHQRSCPALPMFHAR*IPQPDLPRLLLQHH Trigger: ATGATGCTGTAAGAGAAGCCTTGGGAGGTCAGGCTGAGGAATTCAGCGGGCGTGGAACATTGGCAACGCTGGACAAGACCTTTGATGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| CDS CCA 90 bp | AAACGGATGCCAAAGACAAGGGAACAGACGACATTAGAGGTGGCCTaGGCCAGCAGCATGGAAGGGTTGAATGGACGTCCTTCTGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: KRMPKTREQTTLEVA*ASSMEGLNGRPSVF Trigger: GAAGACAGAAGGACGTCCATTCAACCCTTCCATGCTGCTGGCCCAGGCCACCTCTAATGTCGTCTGTTCCCTTGTCTTTGGCATCCGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 ENSMUST00000156714.2 |
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| CDS CCA 90 bp | TTTAGCAGGAAGGCGTCAACGACATCACGTGCAGGACCTGAGGTTTaGAAGCGTCCCTGGTGTTTCTGTACCTGCTGGATAGTGAAGGCA | + |
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Preference number: 5 (lower is better) Translates to: FSRKASTTSRAGPEV*KRPWCFCTCWIVKA Trigger: TGCCTTCACTATCCAGCAGGTACAGAAACACCAGGGACGCTTCCAAACCTCAGGTCCTGCACGTGATGTCGTTGACGCCTTCCTGCTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| CDS-3UTR CAA 90 bp | ATTTCCAGCACTCTCATGAGGACTTGCAGGCAGCTCAGAGATCAGAATGCGTTTAAGACCTCAGTGCCCTaGGGCAGAGTGTACCCTCGG | + |
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Preference number: 5 (lower is better) Translates to: ISSTLMRTCRQLRDQNAFKTSVP*GRVYPR Trigger: CCGAGGGTACACTCTGCCCAAGGGCACTGAGGTCTT...AAACGCATTCTGATCTCTGAGCTGCCTGCAAGTCCTCATGAGAGTGCTGGAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| CDS-3UTR CAA 90 bp | GATAAGGAGGGCTGGAAACAGCTAACAGCACTCCCCTGCATCATCCCTGTGAGGTTCTGTACCTGGGTCTaGTTTCTCCTGTGCCATCTT | + |
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Preference number: 5 (lower is better) Translates to: DKEGWKQLTALPCIIPVRFCTWV*FLLCHL Trigger: AAGATGGCACAGGAGAAACAAGACCCAGGTACAGAA...CCTCACAGGGATGATGCAGGGGAGTGCTGTTAGCTGTTTCCAGCCCTCCTTATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| CDS-3UTR CAA 90 bp | TTCAGACAGCCCTCTCCAAAAAGAAGCCTATGCATCAGTTGCTGTGCGGTTGTGAGCAGCATGGAAGGGTaGAATGGACGTCCTTCTGTC | + |
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Preference number: 5 (lower is better) Translates to: FRQPSPKRSLCISCCAVVSSMEG*NGRPSV Trigger: GACAGAAGGACGTCCATTCAACCCTTCCATGCTGCT...CACAACCGCACAGCAACTGATGCATAGGCTTCTTTTTGGAGAGGGCTGTCTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| CDS CCA 72 bp | GTGTACCCTCGGAAGCAAGTGGTCCTCGTGATGGTGTaGGGCATGCCCATGGGTACCAGTGCCAGGAGCCGC | + |
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Preference number: 6 (lower is better) Translates to: VYPRKQVVLVMV*GMPMGTSARSR Trigger: GCGGCTCCTGGCACTGGTACCCATGGGCATGCCCCACACCATCACGAGGACCACTTGCTTCCGAGGGTACAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| CDS CAA 90 bp | AGGACCCAGCTCCTGTATGAGCTCCTCCCGGACGCGCTGCTGGACTaGAGGGTATCTCAGCAGGAGCAGGAGGGCATAGCGGATGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: RTQLLYELLPDALLD*RVSQQEQEGIADGG Trigger: GCCACCATCCGCTATGCCCTCCTGCTCCTGCTGAGATACCCTCAAGTCCAGCAGCGCGTCCGGGAGGAGCTCATACAGGAGCTGGGTCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| CDS CAA 90 bp | ACCAGACTCTGCACCTCCGCCTGGATCAGCTCCTCGCCTTCTCGCTaGCCCATGCCCAGGTCCCGTAGAGCGAGCAGGGTGAATTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: TRLCTSAWISSSPSR*PMPRSRRASRVNFL Trigger: GAGGAAATTCACCCTGCTCGCTCTACGGGACCTGGGCATGGGCAAGCGAGAAGGCGAGGAGCTGATCCAGGCGGAGGTGCAGAGTCTGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| CDS CAA 72 bp | CTCCTGTATGAGCTCCTCCCGGACGCGCTGCTGGACTaGAGGGTATCTCAGCAGGAGCAGGAGGGCATAGCG | + |
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Preference number: 6 (lower is better) Translates to: LLYELLPDALLD*RVSQQEQEGIA Trigger: CGCTATGCCCTCCTGCTCCTGCTGAGATACCCTCAAGTCCAGCAGCGCGTCCGGGAGGAGCTCATACAGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| CDS TCA 72 bp | GCTTGCCCATGCCCAGGTCCCGTAGAGCGAGCAGGGTaGATTTCCTCAGCTGTTTCCACCGCTCCCCATTGG | + |
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Preference number: 6 (lower is better) Translates to: ACPCPGPVERAG*ISSAVSTAPHW Trigger: CCAATGGGGAGCGGTGGAAACAGCTGAGGAAATTCACCCTGCTCGCTCTACGGGACCTGGGCATGGGCAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| CDS TCA 72 bp | TGGGCAGAGTGTACCCTCGGAAGCAAGTGGTCCTCGTaGTGGTGTGGGGCATGCCCATGGGTACCAGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: WAECTLGSKWSS*WCGACPWVPVP Trigger: TGGCACTGGTACCCATGGGCATGCCCCACACCATCACGAGGACCACTTGCTTCCGAGGGTACACTCTGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| CDS GCA 72 bp | CGTCCTTCTGTCTTCTGGAAAGCCTCCACCAGACTCTaGACCTCCGCCTGGATCAGCTCCTCGCCTTCTCGC | + |
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Preference number: 6 (lower is better) Translates to: RPSVFWKASTRL*TSAWISSSPSR Trigger: GCGAGAAGGCGAGGAGCTGATCCAGGCGGAGGTGCAGAGTCTGGTGGAGGCTTTCCAGAAGACAGAAGGACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 ENSMUST00000156714.2 |
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| CDS TCA 72 bp | GGACCACCACGCGGCGCCAGGGGCCCAGGTATACCGTaGACACAGGCCCATACTTCTTACTTAGCCGCAAAA | + |
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Preference number: 6 (lower is better) Translates to: GPPRGARGPGIP*TQAHTSYLAAK Trigger: TTTTGCGGCTAAGTAAGAAGTATGGGCCTGTGTTCACGGTATACCTGGGCCCCTGGCGCCGCGTGGTGGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| CDS CCA 72 bp | ATCCGTGTAAGGGAGGCGAACTCGATCGCTGAGACTTaGAGCCCTGCCAGGACCCAGCTCCTGTATGAGCTC | + |
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Preference number: 6 (lower is better) Translates to: IRVREANSIAET*SPARTQLLYEL Trigger: GAGCTCATACAGGAGCTGGGTCCTGGCAGGGCTCCAAGTCTCAGCGATCGAGTTCGCCTCCCTTACACGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| CDS CCA 72 bp | GAGGTTTGGAAGCGTCCCTGGTGTTTCTGTACCTGCTaGATAGTGAAGGCAGCCAGGGTGCCCAAGTGGTGC | + |
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Preference number: 6 (lower is better) Translates to: EVWKRPWCFCTC*IVKAARVPKWC Trigger: GCACCACTTGGGCACCCTGGCTGCCTTCACTATCCAGCAGGTACAGAAACACCAGGGACGCTTCCAAACCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| CDS CCA 72 bp | CTCCTGGGTTCTGGAAAACCGCAGGGTCATGCAGTATaGAGCCAATCAGAGGGAAGACCTCAGTGCCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: LLGSGKPQGHAV*SQSEGRPQCPW Trigger: CCAAGGGCACTGAGGTCTTCCCTCTGATTGGCTCCATACTGCATGACCCTGCGGTTTTCCAGAACCCAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| CDS CCA 72 bp | TCCAGGAAGCGGCCTGGATGGAACTCTCCTGGGTTCTaGAAAACCGCAGGGTCATGCAGTATGGAGCCAATC | + |
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Preference number: 6 (lower is better) Translates to: SRKRPGWNSPGF*KTAGSCSMEPI Trigger: GATTGGCTCCATACTGCATGACCCTGCGGTTTTCCAGAACCCAGGAGAGTTCCATCCAGGCCGCTTCCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| CDS TCA 72 bp | AGGTCTTGTCCAGCGTTGCCAATGTTCCACGCCCGCTaGATTCCTCAGCCTGACCTCCCAAGGCTTCTCTTA | + |
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Preference number: 6 (lower is better) Translates to: RSCPALPMFHAR*IPQPDLPRLLL Trigger: TAAGAGAAGCCTTGGGAGGTCAGGCTGAGGAATTCAGCGGGCGTGGAACATTGGCAACGCTGGACAAGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| CDS GCA 72 bp | GAAAACTCCGTGACCATCAAAGGTCTTGTCCAGCGTTaGCAATGTTCCACGCCCGCTGAATTCCTCAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: ENSVTIKGLVQR*QCSTPAEFLSL Trigger: CAGGCTGAGGAATTCAGCGGGCGTGGAACATTGGCAACGCTGGACAAGACCTTTGATGGTCACGGAGTTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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| CDS GCA 72 bp | TGGAACTCTCCTGGGTTCTGGAAAACCGCAGGGTCATaGAGTATGGAGCCAATCAGAGGGAAGACCTCAGTG | + |
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Preference number: 6 (lower is better) Translates to: WNSPGFWKTAGS*SMEPIRGKTSV Trigger: CACTGAGGTCTTCCCTCTGATTGGCTCCATACTGCATGACCCTGCGGTTTTCCAGAACCCAGGAGAGTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043314.10 ENSMUST00000108395.8 |
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