Pregenerated sensors for CYP2R1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030670Ensembl transcript IDs: ENSMUST00000032908.15, ENSMUST00000119712.8, ENSMUST00000128587.8, ENSMUST00000138712.8, ENSMUST00000147428.2, ENSMUST00000211506.2
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAAATATCCATTGCTGTCCAGAAATCGCTCAGGATAGAACATGTCTaGATCTTTCCAGTACTTTTCATCAAAGTGAACAGAATAAAGATT | + |
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Preference number: 1 (lower is better) Translates to: KISIAVQKSLRIEHV*IFPVLFIKVNRIKI Trigger: AATCTTTATTCTGTTCACTTTGATGAAAAGTACTGGAAAGATCCAGACATGTTCTATCCTGAGCGATTTCTGGACAGCAATGGATATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138712.8 ENSMUST00000147428.2 |
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| 3UTR-3UTR TCA 90 bp | TGTTGTGCCTTTAGGAATGGAATAGCCACGTACAACTGCATCTTCCGAAGTTGCGTCTTTCTGCACAGATaGGGTAGGGCTGGGGTTGTA | + |
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Preference number: 2 (lower is better) Translates to: CCAFRNGIATYNCIFRSCVFLHR*GRAGVV Trigger: TACAACCCCAGCCCTACCTCATCTGTGCAGAAAGAC...GCAACTTCGGAAGATGCAGTTGTACGTGGCTATTCCATTCCTAAAGGCACAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138712.8 ENSMUST00000147428.2 |
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| 3UTR-3UTR TCA 90 bp | ACAAGAACATTTCCATTCGAGCCAGCTGTTCTCCAAGACAATGTCTTCTCCCTAGTCTTTCTGCACAGATaGGGTAGGGCTGGGGTTGTA | + |
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Preference number: 2 (lower is better) Translates to: TRTFPFEPAVLQDNVFSLVFLHR*GRAGVV Trigger: TACAACCCCAGCCCTACCTCATCTGTGCAGAAAGAC...TAGGGAGAAGACATTGTCTTGGAGAACAGCTGGCTCGAATGGAAATGTTCTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128587.8 ENSMUST00000138712.8 ENSMUST00000147428.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGCTGGGGTTGTAATGTCATGCCCAACCTGGGCTTCAGATTTGGAACTAGTTATGTCATGCCCAACCTaGGCTTCAGATTTGGAACTA | + |
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Preference number: 2 (lower is better) Translates to: RAGVVMSCPTWASDLELVMSCPT*ASDLEL Trigger: TAGTTCCAAATCTGAAGCCCAGGTTGGGCATGACAT...AACTAGTTCCAAATCTGAAGCCCAGGTTGGGCATGACATTACAACCCCAGCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000128587.8 ENSMUST00000138712.8 ENSMUST00000147428.2 |
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| 3UTR-3UTR GCA 90 bp | ATATCCATTGCTGTCCAGAAATCGCTCAGGATAGAACATGTCTGGATCTTTCCAGGGGTTGTAATGTCATaGCCAACCTGGGCTTCAGAT | + |
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Preference number: 2 (lower is better) Translates to: ISIAVQKSLRIEHVWIFPGVVMS*PTWASD Trigger: ATCTGAAGCCCAGGTTGGGCATGACATTACAACCCC...TGGAAAGATCCAGACATGTTCTATCCTGAGCGATTTCTGGACAGCAATGGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138712.8 ENSMUST00000147428.2 |
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| 3UTR CAA 90 bp | GGTAGGGCTGGGGTTGTAATGTCATGCCCAACCTGGGCTTCAGATTaGGAACTAGTTCATGTGGAAAATGCAAATGAAATTGCTGAAGTA | + |
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Preference number: 2 (lower is better) Translates to: GRAGVVMSCPTWASD*ELVHVENANEIAEV Trigger: TACTTCAGCAATTTCATTTGCATTTTCCACATGAACTAGTTCCAAATCTGAAGCCCAGGTTGGGCATGACATTACAACCCCAGCCCTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128587.8 ENSMUST00000138712.8 ENSMUST00000147428.2 |
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| 3UTR-3UTR GCA 90 bp | CTCAGGATAGAACATGTCTGGATCTTTCCAGTACTTTTCATCAAAGTGAACAGAGGCCATGAAAAGAATTaGCCAGCGGAGCACATTGGT | + |
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Preference number: 2 (lower is better) Translates to: LRIEHVWIFPVLFIKVNRGHEKN*PAEHIG Trigger: ACCAATGTGCTCCGCTGGGCAATTCTTTTCATGGCC...TCTGTTCACTTTGATGAAAAGTACTGGAAAGATCCAGACATGTTCTATCCTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138712.8 ENSMUST00000147428.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGCTGGGGTTGTAATGTCATGCCCAACCTGGGCTTCAGATTTGGAACTAGTTCAGTATAAGGCATTTTaGATTTGTATTCCCAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: RAGVVMSCPTWASDLELVQYKAF*ICIPKK Trigger: CTTCTTGGGAATACAAATGCAAAATGCCTTATACTG...AACTAGTTCCAAATCTGAAGCCCAGGTTGGGCATGACATTACAACCCCAGCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138712.8 ENSMUST00000147428.2 |
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| 3UTR-3UTR CCA 90 bp | ATCCATTGCTGTCCAGAAATCGCTCAGGATAGAACATGTCTGGATCTTTCCAGTGAAGGTCTCCTGTTGTaGCCCACAATTAAATCAATC | + |
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Preference number: 2 (lower is better) Translates to: IHCCPEIAQDRTCLDLSSEGLLL*PTIKSI Trigger: GATTGATTTAATTGTGGGCCACAACAGGAGACCTTC...ACTGGAAAGATCCAGACATGTTCTATCCTGAGCGATTTCTGGACAGCAATGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138712.8 ENSMUST00000147428.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGATAGAACATGTCTGGATCTTTCCAGTACTTTTCATCAAAGTGAACAGAATGGCCATGAAAAGAATTaGCCAGCGGAGCACATTGGT | + |
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Preference number: 2 (lower is better) Translates to: QDRTCLDLSSTFHQSEQNGHEKN*PAEHIG Trigger: ACCAATGTGCTCCGCTGGGCAATTCTTTTCATGGCC...ATTCTGTTCACTTTGATGAAAAGTACTGGAAAGATCCAGACATGTTCTATCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138712.8 ENSMUST00000147428.2 |
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| 3UTR-3UTR CCA 90 bp | TTTAGGAATGGAATAGCCACGTACAACTGCATCTTCCGAAGTTGCATGGAAAATATGTCATGCCCAACCTaGGCTTCAGATTTGGAACTA | + |
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Preference number: 2 (lower is better) Translates to: FRNGIATYNCIFRSCMENMSCPT*ASDLEL Trigger: TAGTTCCAAATCTGAAGCCCAGGTTGGGCATGACAT...ATTTTCCATGCAACTTCGGAAGATGCAGTTGTACGTGGCTATTCCATTCCTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138712.8 ENSMUST00000147428.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGTAAAGTTCCTTAGGATGGAGACAGATGAGAAGAACCTTATCCTAGCAAGAGGCTTTATAAAAATGTaGCTTTGGCCCAAACACCAT | + |
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Preference number: 2 (lower is better) Translates to: GVKFLRMETDEKNLILARGFIKM*LWPKHH Trigger: ATGGTGTTTGGGCCAAAGCCACATTTTTATAAAGCC...TCTTGCTAGGATAAGGTTCTTCTCATCTGTCTCCATCCTAAGGAACTTTACTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211506.2 |
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| 3UTR-3UTR CCA 90 bp | AATGTCATGCCCAACCTGGGCTTCAGATTTGGAACTAGTTCATGTGGAAAATGCAGGATAGAACATGTCTaGATCTTTCCAGTACTTTTC | + |
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Preference number: 2 (lower is better) Translates to: NVMPNLGFRFGTSSCGKCRIEHV*IFPVLF Trigger: GAAAAGTACTGGAAAGATCCAGACATGTTCTATCCT...GCATTTTCCACATGAACTAGTTCCAAATCTGAAGCCCAGGTTGGGCATGACATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138712.8 ENSMUST00000147428.2 |
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| 3UTR-3UTR CCA 90 bp | GAAATCGCTCAGGATAGAACATGTCTGGATCTTTCCAGTACTTTTCATCAAAGTGAAGGTCTCCTGTTGTaGCCCACAATTAAATCAATC | + |
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Preference number: 2 (lower is better) Translates to: EIAQDRTCLDLSSTFHQSEGLLL*PTIKSI Trigger: GATTGATTTAATTGTGGGCCACAACAGGAGACCTTC...ACTTTGATGAAAAGTACTGGAAAGATCCAGACATGTTCTATCCTGAGCGATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138712.8 ENSMUST00000147428.2 |
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| 3UTR-3UTR CCA 90 bp | ATATTACCTCTAAATTTCCATTTGTTGGTATGTTTGCCCAGGATTTTCTTTCCCAATTATGTGTATGTGTaGGGGAATACACCTCACCAT | + |
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Preference number: 2 (lower is better) Translates to: ILPLNFHLLVCLPRIFFPNYVYV*GNTPHH Trigger: ATGGTGAGGTGTATTCCCCCACACATACACATAATT...GGGAAAGAAAATCCTGGGCAAACATACCAACAAATGGAAATTTAGAGGTAATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211506.2 |
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| 3UTR-3UTR TCA 90 bp | ATTACCTCTAAATTTCCATTTGTTGGTATGTTTGCCCAGGATTTTCTTTCCCTTCAAACACCATTATTGTaGTTCAACAAGGTTATTCCC | + |
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Preference number: 2 (lower is better) Translates to: ITSKFPFVGMFAQDFLSLQTPLL*FNKVIP Trigger: GGGAATAACCTTGTTGAATCACAATAATGGTGTTTG...AAGGGAAAGAAAATCCTGGGCAAACATACCAACAAATGGAAATTTAGAGGTAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211506.2 |
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| 3UTR-3UTR GCA 90 bp | CATATTACCTCTAAATTTCCATTTGTTGGTATGTTTGCCCAGGATTTTCTTTCCACACCTGTACCTTTGTaGTCTTCAATCTACAATAAG | + |
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Preference number: 2 (lower is better) Translates to: HITSKFPFVGMFAQDFLSTPVPL*SSIYNK Trigger: CTTATTGTAGATTGAAGAGCACAAAGGTACAGGTGT...GGAAAGAAAATCCTGGGCAAACATACCAACAAATGGAAATTTAGAGGTAATATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211506.2 |
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| 3UTR TCA 72 bp | AATACATTTTGCACTTTCAGCGTCTTTCTGCACAGATaGGGTAGGGCTGGGGTTGTAATGTCATGCCCAACC | + |
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Preference number: 3 (lower is better) Translates to: NTFCTFSVFLHR*GRAGVVMSCPT Trigger: GGTTGGGCATGACATTACAACCCCAGCCCTACCTCATCTGTGCAGAAAGACGCTGAAAGTGCAAAATGTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128587.8 ENSMUST00000138712.8 ENSMUST00000147428.2 |
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| 3UTR-3UTR CAA 90 bp | TGCATTTGTATTCCCAAGAAGGTCTCCTGTTGTGGCCCACAATTAAATCAATCTGCCCAGCGGAGCACATaGGTTGTAGTTTCAGTTCCA | + |
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Preference number: 3 (lower is better) Translates to: CICIPKKVSCCGPQLNQSAQRST*VVVSVP Trigger: TGGAACTGAAACTACAACCAATGTGCTCCGCTGGGC...AGATTGATTTAATTGTGGGCCACAACAGGAGACCTTCTTGGGAATACAAATGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138712.8 ENSMUST00000147428.2 |
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| 3UTR GCA 72 bp | TGTTGTGCCTTTAGGAATGGAATAGCCACGTACAACTaGATCTTCCGAAGTTGCATGGAAAATTCCCAGTGG | + |
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Preference number: 3 (lower is better) Translates to: CCAFRNGIATYN*IFRSCMENSQW Trigger: CCACTGGGAATTTTCCATGCAACTTCGGAAGATGCAGTTGTACGTGGCTATTCCATTCCTAAAGGCACAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138712.8 ENSMUST00000147428.2 |
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| 3UTR-3UTR CAA 90 bp | CTCAGGATAGAACATGTCTGGATCTTTCCAGTACTTTTCATCAAAGTGAACAGAGCCCAGCGGAGCACATaGGTTGTAGTTTCAGTTCCA | + |
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Preference number: 3 (lower is better) Translates to: LRIEHVWIFPVLFIKVNRAQRST*VVVSVP Trigger: TGGAACTGAAACTACAACCAATGTGCTCCGCTGGGC...TCTGTTCACTTTGATGAAAAGTACTGGAAAGATCCAGACATGTTCTATCCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138712.8 ENSMUST00000147428.2 |
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| 3UTR-3UTR CAA 90 bp | AATGTCATGCCCAACCTGGGCTTCAGATTTGGAACTAGTTCATGTGGAAAATGCATTCCCCAATACATTTaGCACTTTCAGCGTCTTTCT | + |
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Preference number: 3 (lower is better) Translates to: NVMPNLGFRFGTSSCGKCIPQYI*HFQRLS Trigger: AGAAAGACGCTGAAAGTGCAAAATGTATTGGGGAAT...GCATTTTCCACATGAACTAGTTCCAAATCTGAAGCCCAGGTTGGGCATGACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000128587.8 ENSMUST00000138712.8 ENSMUST00000147428.2 |
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| 3UTR-3UTR CAA 90 bp | GTCTCCTGTTGTGGCCCACAATTAAATCAATCTCTTTATGAACTTGTCCTTGAAAGGATCATTTTGACCTaGATCCATCTCATCTCCCAT | + |
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Preference number: 3 (lower is better) Translates to: VSCCGPQLNQSLYELVLERIILT*IHLISH Trigger: ATGGGAGATGAGATGGATCAAGGTCAAAATGATCCT...TTCAAGGACAAGTTCATAAAGAGATTGATTTAATTGTGGGCCACAACAGGAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138712.8 |
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| 3UTR CCA 72 bp | ATTGCTGTCCAGAAATCGCTCAGGATAGAACATGTCTaGATCTTTCCAGTACTTTTCATCAAAGTGAACAGA | + |
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Preference number: 3 (lower is better) Translates to: IAVQKSLRIEHV*IFPVLFIKVNR Trigger: TCTGTTCACTTTGATGAAAAGTACTGGAAAGATCCAGACATGTTCTATCCTGAGCGATTTCTGGACAGCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138712.8 ENSMUST00000147428.2 |
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| 3UTR GCA 72 bp | AAACTTCATGTAAAACTGCTTCAGTATAAGGCATTTTaGATTTGTATTCCCAAGAAGGTCTCCTGTTGTGGC | + |
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Preference number: 3 (lower is better) Translates to: KLHVKLLQYKAF*ICIPKKVSCCG Trigger: GCCACAACAGGAGACCTTCTTGGGAATACAAATGCAAAATGCCTTATACTGAAGCAGTTTTACATGAAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138712.8 ENSMUST00000147428.2 |
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| 3UTR GCA 72 bp | GCCCTTCTAAGTGTCTTCATAACACCTGTACCTTTGTaGTCTTCAATCTACAATAAGAATTCATGGAAATTA | + |
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Preference number: 3 (lower is better) Translates to: ALLSVFITPVPL*SSIYNKNSWKL Trigger: TAATTTCCATGAATTCTTATTGTAGATTGAAGAGCACAAAGGTACAGGTGTTATGAAGACACTTAGAAGGGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211506.2 |
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| CDS-3UTR GCA 90 bp | AATGTCATGCCCAACCTGGGCTTCAGATTTGGAACTAGTTCATGTGGAAAATGCCCCGCCGGTCGCCTCTaGCTCAGCAGCTGGCGGACC | + |
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Preference number: 4 (lower is better) Translates to: NVMPNLGFRFGTSSCGKCPAGRL*LSSWRT Trigger: GGTCCGCCAGCTGCTGAGGCAGAGGCGACCGGCGGG...GCATTTTCCACATGAACTAGTTCCAAATCTGAAGCCCAGGTTGGGCATGACATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138712.8 ENSMUST00000147428.2 |
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| CDS-3UTR GCA 90 bp | TTTAGGAATGGAATAGCCACGTACAACTGCATCTTCCGAAGTTGCATGGAAAATCCCGCCGGTCGCCTCTaGCTCAGCAGCTGGCGGACC | + |
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Preference number: 4 (lower is better) Translates to: FRNGIATYNCIFRSCMENPAGRL*LSSWRT Trigger: GGTCCGCCAGCTGCTGAGGCAGAGGCGACCGGCGGG...ATTTTCCATGCAACTTCGGAAGATGCAGTTGTACGTGGCTATTCCATTCCTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138712.8 ENSMUST00000147428.2 |
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| CDS-3UTR GCA 90 bp | CCCAAACACCATTATTGTGATTCAACAAGGTTATTCCCCAATACATTTTGCACTCCCGCCGGTCGCCTCTaGCTCAGCAGCTGGCGGACC | + |
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Preference number: 4 (lower is better) Translates to: PKHHYCDSTRLFPNTFCTPAGRL*LSSWRT Trigger: GGTCCGCCAGCTGCTGAGGCAGAGGCGACCGGCGGG...AGTGCAAAATGTATTGGGGAATAACCTTGTTGAATCACAATAATGGTGTTTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032908.15 |
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| CDS-3UTR CCA 90 bp | AATGTCATGCCCAACCTGGGCTTCAGATTTGGAACTAGTTCATGTGGAAAATGCGATGTTGCCGACAAATaGCAGCCGCGGAGGACCCGG | + |
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Preference number: 4 (lower is better) Translates to: NVMPNLGFRFGTSSCGKCDVADK*QPRRTR Trigger: CCGGGTCCTCCGCGGCTGCCATTTGTCGGCAACATC...GCATTTTCCACATGAACTAGTTCCAAATCTGAAGCCCAGGTTGGGCATGACATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138712.8 ENSMUST00000147428.2 |
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| CDS-3UTR GCA 90 bp | ACAAGAACATTTCCATTCGAGCCAGCTGTTCTCCAAGACAATGTCTTCTCCCTACCAGGGAGCAGATGTTaGCGACAAATGGCAGCCGCG | + |
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Preference number: 4 (lower is better) Translates to: TRTFPFEPAVLQDNVFSLPGSRC*RQMAAA Trigger: CGCGGCTGCCATTTGTCGGCAACATCTGCTCCCTGG...TAGGGAGAAGACATTGTCTTGGAGAACAGCTGGCTCGAATGGAAATGTTCTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138712.8 ENSMUST00000147428.2 |
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| CDS-3UTR CCA 90 bp | CCCAAACACCATTATTGTGATTCAACAAGGTTATTCCCCAATACATTTTGCACTGATGTTGCCGACAAATaGCAGCCGCGGAGGACCCGG | + |
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Preference number: 4 (lower is better) Translates to: PKHHYCDSTRLFPNTFCTDVADK*QPRRTR Trigger: CCGGGTCCTCCGCGGCTGCCATTTGTCGGCAACATC...AGTGCAAAATGTATTGGGGAATAACCTTGTTGAATCACAATAATGGTGTTTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032908.15 |
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| CDS-3UTR CCA 90 bp | CAGGATAGAACATGTCTGGATCTTTCCAGTACTTTTCATCAAAGTGAACAGAATGATGTTGCCGACAAATaGCAGCCGCGGAGGACCCGG | + |
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Preference number: 4 (lower is better) Translates to: QDRTCLDLSSTFHQSEQNDVADK*QPRRTR Trigger: CCGGGTCCTCCGCGGCTGCCATTTGTCGGCAACATC...ATTCTGTTCACTTTGATGAAAAGTACTGGAAAGATCCAGACATGTTCTATCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138712.8 ENSMUST00000147428.2 |
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| CDS-3UTR CCA 90 bp | AATGTCATGCCCAACCTGGGCTTCAGATTTGGAACTAGTTCATGTGGAAAATGCGGAAGACTGGAGCACTaGCAGCTAGTTCCACATTCT | + |
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Preference number: 4 (lower is better) Translates to: NVMPNLGFRFGTSSCGKCGRLEH*QLVPHS Trigger: AGAATGTGGAACTAGCTGCCAGTGCTCCAGTCTTCC...GCATTTTCCACATGAACTAGTTCCAAATCTGAAGCCCAGGTTGGGCATGACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128587.8 |
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| CDS-3UTR TCA 90 bp | GGCTGGGGTTGTAATGTCATGCCCAACCTGGGCTTCAGATTTGGAACTAGTTCACAGTGTCTTCATAAGTaGATCGTTCTCCAAAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: GWGCNVMPNLGFRFGTSSQCLHK*IVLQKG Trigger: TCCTTTTTGGAGAACGATTCACTTATGAAGACACTG...TGAACTAGTTCCAAATCTGAAGCCCAGGTTGGGCATGACATTACAACCCCAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128587.8 |
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| CDS-3UTR GCA 90 bp | TGTTTACTTGGCTTTATAAAAATGTGGCTTTGGCCCAAACACCATTATTGTGATCCAGGGAGCAGATGTTaGCGACAAATGGCAGCCGCG | + |
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Preference number: 4 (lower is better) Translates to: CLLGFIKMWLWPKHHYCDPGSRC*RQMAAA Trigger: CGCGGCTGCCATTTGTCGGCAACATCTGCTCCCTGG...ATCACAATAATGGTGTTTGGGCCAAAGCCACATTTTTATAAAGCCAAGTAAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032908.15 |
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| CDS-3UTR CCA 90 bp | AACATTTCCATTCGAGCCAGCTGTTCTCCAAGACAATGTCTTCTCCCTAGAGAAGAACAAAGGAAGGCATaGTCTATCTCGCCATACACC | + |
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Preference number: 4 (lower is better) Translates to: NISIRASCSPRQCLLPREEQRKA*SISPYT Trigger: GGTGTATGGCGAGATAGACCATGCCTTCCTTTGTTC...TTCTCTAGGGAGAAGACATTGTCTTGGAGAACAGCTGGCTCGAATGGAAATGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138712.8 ENSMUST00000147428.2 |
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| CDS-3UTR CCA 90 bp | AATGTCATGCCCAACCTGGGCTTCAGATTTGGAACTAGTTCATGTGGAAAATGCGAACAAAGGAAGGCATaGTCTATCTCGCCATACACC | + |
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Preference number: 4 (lower is better) Translates to: NVMPNLGFRFGTSSCGKCEQRKA*SISPYT Trigger: GGTGTATGGCGAGATAGACCATGCCTTCCTTTGTTC...GCATTTTCCACATGAACTAGTTCCAAATCTGAAGCCCAGGTTGGGCATGACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138712.8 ENSMUST00000147428.2 |
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| CDS-3UTR GCA 90 bp | CCAACCTGGGCTTCAGATTTGGAACTAGTTCATGTGGAAAATGCAAATGAAATTGGCCATGAAAAGAATTaGCCAGCGGAGCACATTGGT | + |
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Preference number: 4 (lower is better) Translates to: PTWASDLELVHVENANEIGHEKN*PAEHIG Trigger: ACCAATGTGCTCCGCTGGGCAATTCTTTTCATGGCC...AATTTCATTTGCATTTTCCACATGAACTAGTTCCAAATCTGAAGCCCAGGTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128587.8 |
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| CDS-3UTR GCA 90 bp | GGCCCAAACACCATTATTGTGATTCAACAAGGTTATTCCCCAATACATTTTGCAGGGGTTGTAATGTCATaGCCAACCTGGGCTTCAGAT | + |
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Preference number: 4 (lower is better) Translates to: GPNTIIVIQQGYSPIHFAGVVMS*PTWASD Trigger: ATCTGAAGCCCAGGTTGGGCATGACATTACAACCCC...TGCAAAATGTATTGGGGAATAACCTTGTTGAATCACAATAATGGTGTTTGGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032908.15 ENSMUST00000211506.2 |
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| CDS-3UTR TCA 90 bp | ACATTTCCATTCGAGCCAGCTGTTCTCCAAGACAATGTCTTCTCCCTAGAGAAATACCATATCTGGAATTaGGTAAGCCTCCCATTTTTG | + |
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Preference number: 4 (lower is better) Translates to: TFPFEPAVLQDNVFSLEKYHIWN*VSLPFL Trigger: CAAAAATGGGAGGCTTACTCAATTCCAGATATGGTA...TTTCTCTAGGGAGAAGACATTGTCTTGGAGAACAGCTGGCTCGAATGGAAATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128587.8 |
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| CDS-3UTR TCA 90 bp | AACAGTGTATTTGTGTTTACTTGGCTTTATAAAAATGTGGCTTTGGCCCAAACAGTCTTTCTGCACAGATaGGGTAGGGCTGGGGTTGTA | + |
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Preference number: 4 (lower is better) Translates to: NSVFVFTWLYKNVALAQTVFLHR*GRAGVV Trigger: TACAACCCCAGCCCTACCTCATCTGTGCAGAAAGAC...TGTTTGGGCCAAAGCCACATTTTTATAAAGCCAAGTAAACACAAATACACTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032908.15 ENSMUST00000211506.2 |
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| CDS-3UTR GCA 90 bp | TTGTGTTTACTTGGCTTTATAAAAATGTGGCTTTGGCCCAAACACCATTATTGTGGCCATGAAAAGAATTaGCCAGCGGAGCACATTGGT | + |
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Preference number: 4 (lower is better) Translates to: LCLLGFIKMWLWPKHHYCGHEKN*PAEHIG Trigger: ACCAATGTGCTCCGCTGGGCAATTCTTTTCATGGCC...ACAATAATGGTGTTTGGGCCAAAGCCACATTTTTATAAAGCCAAGTAAACACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032908.15 ENSMUST00000211506.2 |
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| CDS-3UTR GCA 90 bp | TGTTTACTTGGCTTTATAAAAATGTGGCTTTGGCCCAAACACCATTATTGTGATGGCCATGAAAAGAATTaGCCAGCGGAGCACATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CLLGFIKMWLWPKHHYCDGHEKN*PAEHIG Trigger: ACCAATGTGCTCCGCTGGGCAATTCTTTTCATGGCC...ATCACAATAATGGTGTTTGGGCCAAAGCCACATTTTTATAAAGCCAAGTAAACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032908.15 ENSMUST00000211506.2 |
||
| CDS-3UTR GCA 90 bp | GGCCCAAACACCATTATTGTGATTCAACAAGGTTATTCCCCAATACATTTTGCAATAGCCACGTACAACTaGATCTTCCGAAGTTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: GPNTIIVIQQGYSPIHFAIATYN*IFRSCM Trigger: CATGCAACTTCGGAAGATGCAGTTGTACGTGGCTAT...TGCAAAATGTATTGGGGAATAACCTTGTTGAATCACAATAATGGTGTTTGGGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032908.15 ENSMUST00000211506.2 |
||
| CDS-3UTR GCA 90 bp | TTTGTGTTTACTTGGCTTTATAAAAATGTGGCTTTGGCCCAAACACCATTATTGGGGGTTGTAATGTCATaGCCAACCTGGGCTTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FVFTWLYKNVALAQTPLLGVVMS*PTWASD Trigger: ATCTGAAGCCCAGGTTGGGCATGACATTACAACCCC...CAATAATGGTGTTTGGGCCAAAGCCACATTTTTATAAAGCCAAGTAAACACAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032908.15 ENSMUST00000211506.2 |
||
| CDS-3UTR CCA 90 bp | TTTGTGTTTACTTGGCTTTATAAAAATGTGGCTTTGGCCCAAACACCATTATTGGGAAGACTGGAGCACTaGCAGCTAGTTCCACATTCT | + |
|
Preference number: 4 (lower is better) Translates to: FVFTWLYKNVALAQTPLLGRLEH*QLVPHS Trigger: AGAATGTGGAACTAGCTGCCAGTGCTCCAGTCTTCC...CAATAATGGTGTTTGGGCCAAAGCCACATTTTTATAAAGCCAAGTAAACACAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032908.15 ENSMUST00000211506.2 |
||
| CDS-3UTR CCA 90 bp | GTTGTAATGTCATGCCCAACCTGGGCTTCAGATTTGGAACTAGTTCATGTGGAAAGGATAGAACATGTCTaGATCTTTCCAGTACTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VVMSCPTWASDLELVHVERIEHV*IFPVLE Trigger: TTCAAGTACTGGAAAGATCCAGACATGTTCTATCCT...TTCCACATGAACTAGTTCCAAATCTGAAGCCCAGGTTGGGCATGACATTACAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128587.8 |
||
| CDS-3UTR GCA 90 bp | AATGTCATGCCCAACCTGGGCTTCAGATTTGGAACTAGTTCATGTGGAAAATGCAGGCTTTCTATTGACTaGAGCTTTTTCAATAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NVMPNLGFRFGTSSCGKCRLSID*SFFNKS Trigger: AGACTTATTGAAAAAGCTGCAGTCAATAGAAAGCCT...GCATTTTCCACATGAACTAGTTCCAAATCTGAAGCCCAGGTTGGGCATGACATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128587.8 |
||
| CDS-3UTR CCA 90 bp | CCCAAACACCATTATTGTGATTCAACAAGGTTATTCCCCAATACATTTTGCACTATGTCATGCCCAACCTaGGCTTCAGATTTGGAACTA | + |
|
Preference number: 4 (lower is better) Translates to: PKHHYCDSTRLFPNTFCTMSCPT*ASDLEL Trigger: TAGTTCCAAATCTGAAGCCCAGGTTGGGCATGACAT...AGTGCAAAATGTATTGGGGAATAACCTTGTTGAATCACAATAATGGTGTTTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032908.15 ENSMUST00000211506.2 |
||
| CDS-3UTR TCA 90 bp | GGCCCAAACACCATTATTGTGATTCAACAAGGTTATTCCCCAATACATTTTGCATACCATATCTGGAATTaGGTAAGCCTCCCATTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GPNTIIVIQQGYSPIHFAYHIWN*VSLPFL Trigger: CAAAAATGGGAGGCTTACTCAATTCCAGATATGGTA...TGCAAAATGTATTGGGGAATAACCTTGTTGAATCACAATAATGGTGTTTGGGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032908.15 |
||
| CDS-3UTR GCA 90 bp | CCAACCTGGGCTTCAGATTTGGAACTAGTTCATGTGGAAAATGCAAATGAAATTGCCAATCCATGGAAATaGATTATAAAGGAAGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PTWASDLELVHVENANEIANPWK*IIKEDW Trigger: CCAGTCTTCCTTTATAATGCATTTCCATGGATTGGC...AATTTCATTTGCATTTTCCACATGAACTAGTTCCAAATCTGAAGCCCAGGTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128587.8 |
||
| CDS-3UTR GCA 90 bp | AACAGTGTATTTGTGTTTACTTGGCTTTATAAAAATGTGGCTTTGGCCCAAACAATAGCCACGTACAACTaGATCTTCCGAAGTTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: NSVFVFTWLYKNVALAQTIATYN*IFRSCM Trigger: CATGCAACTTCGGAAGATGCAGTTGTACGTGGCTAT...TGTTTGGGCCAAAGCCACATTTTTATAAAGCCAAGTAAACACAAATACACTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032908.15 ENSMUST00000211506.2 |
||
| CDS-3UTR CCA 90 bp | ACAGTGTATTTGTGTTTACTTGGCTTTATAAAAATGTGGCTTTGGCCCAAACACGAAGGTCTCCTGTTGTaGCCCACAATTAAATCAATC | + |
|
Preference number: 4 (lower is better) Translates to: TVYLCLLGFIKMWLWPKHEGLLL*PTIKSI Trigger: GATTGATTTAATTGTGGGCCACAACAGGAGACCTTC...GTGTTTGGGCCAAAGCCACATTTTTATAAAGCCAAGTAAACACAAATACACTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032908.15 ENSMUST00000211506.2 |
||
| CDS-3UTR CCA 90 bp | AACAGTGTATTTGTGTTTACTTGGCTTTATAAAAATGTGGCTTTGGCCCAAACAATGTCATGCCCAACCTaGGCTTCAGATTTGGAACTA | + |
|
Preference number: 4 (lower is better) Translates to: NSVFVFTWLYKNVALAQTMSCPT*ASDLEL Trigger: TAGTTCCAAATCTGAAGCCCAGGTTGGGCATGACAT...TGTTTGGGCCAAAGCCACATTTTTATAAAGCCAAGTAAACACAAATACACTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032908.15 ENSMUST00000211506.2 |
||
| CDS-3UTR TCA 90 bp | ACAGTGTATTTGTGTTTACTTGGCTTTATAAAAATGTGGCTTTGGCCCAAACACCAGTGTCTTCATAAGTaGATCGTTCTCCAAAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TVYLCLLGFIKMWLWPKHQCLHK*IVLQKG Trigger: TCCTTTTTGGAGAACGATTCACTTATGAAGACACTG...GTGTTTGGGCCAAAGCCACATTTTTATAAAGCCAAGTAAACACAAATACACTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032908.15 |
||
| CDS-3UTR GCA 90 bp | ACAGTGTATTTGTGTTTACTTGGCTTTATAAAAATGTGGCTTTGGCCCAAACACGCCAATCCATGGAAATaGATTATAAAGGAAGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: TVYLCLLGFIKMWLWPKHANPWK*IIKEDW Trigger: CCAGTCTTCCTTTATAATGCATTTCCATGGATTGGC...GTGTTTGGGCCAAAGCCACATTTTTATAAAGCCAAGTAAACACAAATACACTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032908.15 ENSMUST00000211506.2 |
||
| CDS-3UTR CCA 90 bp | ATTACCTCTAAATTTCCATTTGTTGGTATGTTTGCCCAGGATTTTCTTTCCCTTGAAGGTCTCCTGTTGTaGCCCACAATTAAATCAATC | + |
|
Preference number: 4 (lower is better) Translates to: ITSKFPFVGMFAQDFLSLEGLLL*PTIKSI Trigger: GATTGATTTAATTGTGGGCCACAACAGGAGACCTTC...AAGGGAAAGAAAATCCTGGGCAAACATACCAACAAATGGAAATTTAGAGGTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211506.2 |
||
| 3UTR CAA 72 bp | ATGGCCCTTCTAAGTGTCTTCATAACACCTGTACCTTaGTGCTCTTCAATCTACAATAAGAATTCATGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: MALLSVFITPVP*CSSIYNKNSWK Trigger: TTTCCATGAATTCTTATTGTAGATTGAAGAGCACAAAGGTACAGGTGTTATGAAGACACTTAGAAGGGCCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211506.2 |
||
| CDS-3UTR CCA 90 bp | GTATTTGTGTTTACTTGGCTTTATAAAAATGTGGCTTTGGCCCAAACACCATTAAGGATAGAACATGTCTaGATCTTTCCAGTACTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VFVFTWLYKNVALAQTPLRIEHV*IFPVLF Trigger: GAAAAGTACTGGAAAGATCCAGACATGTTCTATCCT...TAATGGTGTTTGGGCCAAAGCCACATTTTTATAAAGCCAAGTAAACACAAATAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032908.15 ENSMUST00000211506.2 |
||
| CDS-3UTR CCA 90 bp | AACAGTGTATTTGTGTTTACTTGGCTTTATAAAAATGTGGCTTTGGCCCAAACAAGGATAGAACATGTCTaGATCTTTCCAGTACTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NSVFVFTWLYKNVALAQTRIEHV*IFPVLF Trigger: GAAAAGTACTGGAAAGATCCAGACATGTTCTATCCT...TGTTTGGGCCAAAGCCACATTTTTATAAAGCCAAGTAAACACAAATACACTGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032908.15 ENSMUST00000211506.2 |
||
| CDS-3UTR GCA 90 bp | TTGTGTTTACTTGGCTTTATAAAAATGTGGCTTTGGCCCAAACACCATTATTGTAGGCTTTCTATTGACTaGAGCTTTTTCAATAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LCLLGFIKMWLWPKHHYCRLSID*SFFNKS Trigger: AGACTTATTGAAAAAGCTGCAGTCAATAGAAAGCCT...ACAATAATGGTGTTTGGGCCAAAGCCACATTTTTATAAAGCCAAGTAAACACAA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032908.15 ENSMUST00000211506.2 |
||
| CDS-3UTR GCA 90 bp | TTTGTGTTTACTTGGCTTTATAAAAATGTGGCTTTGGCCCAAACACCATTATTGAGGCTTTCTATTGACTaGAGCTTTTTCAATAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FVFTWLYKNVALAQTPLLRLSID*SFFNKS Trigger: AGACTTATTGAAAAAGCTGCAGTCAATAGAAAGCCT...CAATAATGGTGTTTGGGCCAAAGCCACATTTTTATAAAGCCAAGTAAACACAAA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032908.15 ENSMUST00000211506.2 |
||
| CDS-3UTR GCA 90 bp | AACAGTGTATTTGTGTTTACTTGGCTTTATAAAAATGTGGCTTTGGCCCAAACACAGTATAAGGCATTTTaGATTTGTATTCCCAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NSVFVFTWLYKNVALAQTQYKAF*ICIPKK Trigger: CTTCTTGGGAATACAAATGCAAAATGCCTTATACTG...TGTTTGGGCCAAAGCCACATTTTTATAAAGCCAAGTAAACACAAATACACTGTT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032908.15 ENSMUST00000211506.2 |
||
| CDS-3UTR GCA 90 bp | CATATTACCTCTAAATTTCCATTTGTTGGTATGTTTGCCCAGGATTTTCTTTCCCAGTATAAGGCATTTTaGATTTGTATTCCCAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HITSKFPFVGMFAQDFLSQYKAF*ICIPKK Trigger: CTTCTTGGGAATACAAATGCAAAATGCCTTATACTG...GGAAAGAAAATCCTGGGCAAACATACCAACAAATGGAAATTTAGAGGTAATATG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211506.2 |
||
| CDS-3UTR CAA 90 bp | ATCCATTGCTGTCCAGAAATCGCTCAGGATAGAACATGTCTGGATCTTTCCAGTGCCAGGGAGCAGATGTaGCCGACAAATGGCAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: IHCCPEIAQDRTCLDLSSAREQM*PTNGSR Trigger: GCGGCTGCCATTTGTCGGCAACATCTGCTCCCTGGC...ACTGGAAAGATCCAGACATGTTCTATCCTGAGCGATTTCTGGACAGCAATGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138712.8 ENSMUST00000147428.2 |
||
| CDS-3UTR CAA 90 bp | GGCTGGGGTTGTAATGTCATGCCCAACCTGGGCTTCAGATTTGGAACTAGTTCAGCCCAGCGGAGCACATaGGTTGTAGTTTCAGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GWGCNVMPNLGFRFGTSSAQRST*VVVSVP Trigger: TGGAACTGAAACTACAACCAATGTGCTCCGCTGGGC...TGAACTAGTTCCAAATCTGAAGCCCAGGTTGGGCATGACATTACAACCCCAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128587.8 |
||
| CDS-3UTR CAA 90 bp | GTCTCCTGTTGTGGCCCACAATTAAATCAATCTCTTTATGAACTTGTCCTTGAAGCCAGGGAGCAGATGTaGCCGACAAATGGCAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: VSCCGPQLNQSLYELVLEAREQM*PTNGSR Trigger: GCGGCTGCCATTTGTCGGCAACATCTGCTCCCTGGC...TTCAAGGACAAGTTCATAAAGAGATTGATTTAATTGTGGGCCACAACAGGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138712.8 ENSMUST00000147428.2 |
||
| CDS-3UTR CAA 90 bp | GTGTATTTGTGTTTACTTGGCTTTATAAAAATGTGGCTTTGGCCCAAACACCATGCCAGGGAGCAGATGTaGCCGACAAATGGCAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: VYLCLLGFIKMWLWPKHHAREQM*PTNGSR Trigger: GCGGCTGCCATTTGTCGGCAACATCTGCTCCCTGGC...ATGGTGTTTGGGCCAAAGCCACATTTTTATAAAGCCAAGTAAACACAAATACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032908.15 |
||
| CDS-3UTR CAA 90 bp | GGTAGGGCTGGGGTTGTAATGTCATGCCCAACCTGGGCTTCAGATTTGGAACTACTACCATATCTGGAATaGAGTAAGCCTCCCATTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GRAGVVMSCPTWASDLELLPYLE*SKPPIF Trigger: AAAAATGGGAGGCTTACTCAATTCCAGATATGGTAG...TAGTTCCAAATCTGAAGCCCAGGTTGGGCATGACATTACAACCCCAGCCCTACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128587.8 |
||
| CDS-3UTR CAA 90 bp | GTTGTAATGTCATGCCCAACCTGGGCTTCAGATTTGGAACTAGTTCATGTGGAATTTGTTATCAGTTGCTaGAGGTCAAAAGGTCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: VVMSCPTWASDLELVHVEFVISC*RSKGPP Trigger: AGGTGGACCTTTTGACCTCAAGCAACTGATAACAAA...TTCCACATGAACTAGTTCCAAATCTGAAGCCCAGGTTGGGCATGACATTACAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128587.8 |
||
| CDS-3UTR CAA 90 bp | CCCAAACACCATTATTGTGATTCAACAAGGTTATTCCCCAATACATTTTGCACTGCCCAGCGGAGCACATaGGTTGTAGTTTCAGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PKHHYCDSTRLFPNTFCTAQRST*VVVSVP Trigger: TGGAACTGAAACTACAACCAATGTGCTCCGCTGGGC...AGTGCAAAATGTATTGGGGAATAACCTTGTTGAATCACAATAATGGTGTTTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032908.15 ENSMUST00000211506.2 |
||
| CDS-3UTR CAA 90 bp | GTTGTAATGTCATGCCCAACCTGGGCTTCAGATTTGGAACTAGTTCATGTGGAACATTTAGAACGACAGTaGATATGCCTCCAAGATCTA | + |
|
Preference number: 5 (lower is better) Translates to: VVMSCPTWASDLELVHVEHLERQ*ICLQDL Trigger: TAGATCTTGGAGGCATATCAACTGTCGTTCTAAATG...TTCCACATGAACTAGTTCCAAATCTGAAGCCCAGGTTGGGCATGACATTACAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128587.8 |
||
| CDS-3UTR CAA 90 bp | TTGTGTTTACTTGGCTTTATAAAAATGTGGCTTTGGCCCAAACACCATTATTGTGCCCAGCGGAGCACATaGGTTGTAGTTTCAGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LCLLGFIKMWLWPKHHYCAQRST*VVVSVP Trigger: TGGAACTGAAACTACAACCAATGTGCTCCGCTGGGC...ACAATAATGGTGTTTGGGCCAAAGCCACATTTTTATAAAGCCAAGTAAACACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032908.15 ENSMUST00000211506.2 |
||
| CDS-3UTR CAA 90 bp | AATGTCATGCCCAACCTGGGCTTCAGATTTGGAACTAGTTCATGTGGAAAATGCTCAAAAGGTCCACCTTaGTATGTTTCAATAGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: NVMPNLGFRFGTSSCGKCSKGPP*YVSIAS Trigger: TGATGCTATTGAAACATACAAAGGTGGACCTTTTGA...GCATTTTCCACATGAACTAGTTCCAAATCTGAAGCCCAGGTTGGGCATGACATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128587.8 |
||
| CDS-3UTR CAA 90 bp | GTATTTGTGTTTACTTGGCTTTATAAAAATGTGGCTTTGGCCCAAACACCATTACTGCATCTTCCGAAGTaGCATGGAAAATTCCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: VFVFTWLYKNVALAQTPLLHLPK*HGKFPV Trigger: CACTGGGAATTTTCCATGCAACTTCGGAAGATGCAG...TAATGGTGTTTGGGCCAAAGCCACATTTTTATAAAGCCAAGTAAACACAAATAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032908.15 ENSMUST00000211506.2 |
||
| CDS-3UTR CAA 90 bp | CATATTACCTCTAAATTTCCATTTGTTGGTATGTTTGCCCAGGATTTTCTTTCCCTGCATCTTCCGAAGTaGCATGGAAAATTCCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: HITSKFPFVGMFAQDFLSLHLPK*HGKFPV Trigger: CACTGGGAATTTTCCATGCAACTTCGGAAGATGCAG...GGAAAGAAAATCCTGGGCAAACATACCAACAAATGGAAATTTAGAGGTAATATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211506.2 |
||
| CDS-3UTR CAA 90 bp | ACAGTGTATTTGTGTTTACTTGGCTTTATAAAAATGTGGCTTTGGCCCAAACACTTTGTTATCAGTTGCTaGAGGTCAAAAGGTCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: TVYLCLLGFIKMWLWPKHFVISC*RSKGPP Trigger: AGGTGGACCTTTTGACCTCAAGCAACTGATAACAAA...GTGTTTGGGCCAAAGCCACATTTTTATAAAGCCAAGTAAACACAAATACACTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032908.15 |
||
| CDS-3UTR CAA 90 bp | GTATTTGTGTTTACTTGGCTTTATAAAAATGTGGCTTTGGCCCAAACACCATTACAAGAAGGTCTCCTGTaGTGGCCCACAATTAAATCA | + |
|
Preference number: 5 (lower is better) Translates to: VFVFTWLYKNVALAQTPLQEGLL*WPTIKS Trigger: TGATTTAATTGTGGGCCACAACAGGAGACCTTCTTG...TAATGGTGTTTGGGCCAAAGCCACATTTTTATAAAGCCAAGTAAACACAAATAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032908.15 ENSMUST00000211506.2 |
||
| CDS-3UTR CAA 90 bp | GTATTTGTGTTTACTTGGCTTTATAAAAATGTGGCTTTGGCCCAAACACCATTAACCTGGGCTTCAGATTaGGAACTAGTTCATGTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VFVFTWLYKNVALAQTPLTWASD*ELVHVE Trigger: TTCCACATGAACTAGTTCCAAATCTGAAGCCCAGGT...TAATGGTGTTTGGGCCAAAGCCACATTTTTATAAAGCCAAGTAAACACAAATAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032908.15 ENSMUST00000211506.2 |
||
| CDS-3UTR CAA 90 bp | TTTGTGTTTACTTGGCTTTATAAAAATGTGGCTTTGGCCCAAACACCATTATTGACCTGGGCTTCAGATTaGGAACTAGTTCATGTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: FVFTWLYKNVALAQTPLLTWASD*ELVHVE Trigger: TTCCACATGAACTAGTTCCAAATCTGAAGCCCAGGT...CAATAATGGTGTTTGGGCCAAAGCCACATTTTTATAAAGCCAAGTAAACACAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032908.15 ENSMUST00000211506.2 |
||
| CDS TCA 90 bp | TTCATAAGTGAATCGTTCTCCAAAAAGGATAAGGTTAGTTATGTTTaGAACAGCATTTGTTATCAGTTGCTTGAGGTCAAAAGGTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: FISESFSKKDKVSYV*NSICYQLLEVKRST Trigger: GGTGGACCTTTTGACCTCAAGCAACTGATAACAAATGCTGTTTCAAACATAACTAACCTTATCCTTTTTGGAGAACGATTCACTTATGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032908.15 ENSMUST00000128587.8 |
||
| CDS GCA 90 bp | TCCCATTTTTGTCATCTTCATGAACAAAGGAAGGCATGGTCTATCTaGAAAAATTTCACTTTGATGAACAAGGCATTCCTTTACTACATC | + |
|
Preference number: 5 (lower is better) Translates to: SHFCHLHEQRKAWSI*KNFTLMNKAFLYYI Trigger: GATGTAGTAAAGGAATGCCTTGTTCATCAAAGTGAAATTTTTGCAGATAGACCATGCCTTCCTTTGTTCATGAAGATGACAAAAATGGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000032908.15 ENSMUST00000119712.8 ENSMUST00000128587.8 |
||
| CDS-3UTR CAA 90 bp | GTATTTGTGTTTACTTGGCTTTATAAAAATGTGGCTTTGGCCCAAACACCATTACATTTAGAACGACAGTaGATATGCCTCCAAGATCTA | + |
|
Preference number: 5 (lower is better) Translates to: VFVFTWLYKNVALAQTPLHLERQ*ICLQDL Trigger: TAGATCTTGGAGGCATATCAACTGTCGTTCTAAATG...TAATGGTGTTTGGGCCAAAGCCACATTTTTATAAAGCCAAGTAAACACAAATAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032908.15 |
||
| CDS-3UTR CAA 90 bp | AACAGTGTATTTGTGTTTACTTGGCTTTATAAAAATGTGGCTTTGGCCCAAACACTACCATATCTGGAATaGAGTAAGCCTCCCATTTTT | + |
|
Preference number: 5 (lower is better) Translates to: NSVFVFTWLYKNVALAQTLPYLE*SKPPIF Trigger: AAAAATGGGAGGCTTACTCAATTCCAGATATGGTAG...TGTTTGGGCCAAAGCCACATTTTTATAAAGCCAAGTAAACACAAATACACTGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032908.15 |
||
| CDS-3UTR CAA 90 bp | GTGTATTTGTGTTTACTTGGCTTTATAAAAATGTGGCTTTGGCCCAAACACCATTCAAAAGGTCCACCTTaGTATGTTTCAATAGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: VYLCLLGFIKMWLWPKHHSKGPP*YVSIAS Trigger: TGATGCTATTGAAACATACAAAGGTGGACCTTTTGA...ATGGTGTTTGGGCCAAAGCCACATTTTTATAAAGCCAAGTAAACACAAATACAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032908.15 |
||
| CDS TCA 72 bp | TTAGAACGACAGTTGATATGCCTCCAAGATCTAAACTaGAAATCTCGCCATACACCCGGCTCTGCTTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LERQLICLQDLN*KSRHTPGSASS Trigger: TGAGGAAGCAGAGCCGGGTGTATGGCGAGATTTTCAGTTTAGATCTTGGAGGCATATCAACTGTCGTTCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032908.15 ENSMUST00000119712.8 |
||
| CDS TCA 72 bp | GAATCGTTCTCCAAAAAGGATAAGGTTAGTTATGTTTaGAACAGCATTTGTTATCAGTTGCTTGAGGTCAAA | + |
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Preference number: 6 (lower is better) Translates to: ESFSKKDKVSYV*NSICYQLLEVK Trigger: TTTGACCTCAAGCAACTGATAACAAATGCTGTTTCAAACATAACTAACCTTATCCTTTTTGGAGAACGATTC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032908.15 ENSMUST00000128587.8 |
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| CDS CAA 72 bp | TTTGTTATCAGTTGCTTGAGGTCAAAAGGTCCACCTTaGTATGTTTCAATAGCATCAATTAAAGACCAAGTT | + |
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Preference number: 6 (lower is better) Translates to: FVISCLRSKGPP*YVSIASIKDQV Trigger: AACTTGGTCTTTAATTGATGCTATTGAAACATACAAAGGTGGACCTTTTGACCTCAAGCAACTGATAACAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032908.15 ENSMUST00000128587.8 |
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