Pregenerated sensors for CYP2J13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028571Ensembl transcript IDs: ENSMUST00000030305.13, ENSMUST00000097973.3, ENSMUST00000107078.9, ENSMUST00000132513.8
Found 192 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATGGGAGAGAGATTAACGTTGCCTCAAGGAAGTGAGAAGGCTCACTaGTACATCCACTCCAGTAGTGACAAGCGCGACAGCCCCAAAACC | + |
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Preference number: 1 (lower is better) Translates to: MGERLTLPQGSEKAH*YIHSSSDKRDSPKT Trigger: GGTTTTGGGGCTGTCGCGCTTGTCACTACTGGAGTGGATGTAGCAGTGAGCCTTCTCACTTCCTTGAGGCAACGTTAATCTCTCTCCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
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| 3UTR GCA 90 bp | CGTGGCAGTTCACCAGCTTCTCAGGTTACACGAAGAGTGAACAGTTaGTGGGATTGGGAATGGGGAAGAGACTCTTCAGTTGTACAGATG | + |
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Preference number: 1 (lower is better) Translates to: RGSSPASQVTRRVNS*WDWEWGRDSSVVQM Trigger: CATCTGTACAACTGAAGAGTCTCTTCCCCATTCCCAATCCCAGCAACTGTTCACTCTTCGTGTAACCTGAGAAGCTGGTGAACTGCCACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
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| 3UTR CCA 90 bp | GGCAGTTCACCAGCTTCTCAGGTTACACGAAGAGTGAACAGTTGCTaGGATTGGGAATGGGGAAGAGACTCTTCAGTTGTACAGATGCTG | + |
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Preference number: 1 (lower is better) Translates to: GSSPASQVTRRVNSC*DWEWGRDSSVVQML Trigger: CAGCATCTGTACAACTGAAGAGTCTCTTCCCCATTCCCAATCCCAGCAACTGTTCACTCTTCGTGTAACCTGAGAAGCTGGTGAACTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
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| 3UTR CCA 90 bp | TCACCAGCTTCTCAGGTTACACGAAGAGTGAACAGTTGCTGGGATTaGGAATGGGGAAGAGACTCTTCAGTTGTACAGATGCTGCCTGTA | + |
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Preference number: 1 (lower is better) Translates to: SPASQVTRRVNSCWD*EWGRDSSVVQMLPV Trigger: TACAGGCAGCATCTGTACAACTGAAGAGTCTCTTCCCCATTCCCAATCCCAGCAACTGTTCACTCTTCGTGTAACCTGAGAAGCTGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
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| 3UTR CCA 90 bp | TATGGCAAGGGCATGCAGCCCTTGCCCCTGACTTCTAAGATTAAGTaGACCTTAGGTGGAGCTGCTTTTGATTCCCAGTTGTTAACACTG | + |
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Preference number: 1 (lower is better) Translates to: YGKGMQPLPLTSKIK*TLGGAAFDSQLLTL Trigger: CAGTGTTAACAACTGGGAATCAAAAGCAGCTCCACCTAAGGTCCACTTAATCTTAGAAGTCAGGGGCAAGGGCTGCATGCCCTTGCCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
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| 3UTR GCA 90 bp | CACGGAAACGTAGTCTCCTGGAAGTGTGGCATCCTGTACAACGAATaGTTCAATGTCCTTGCTTTAGTTAGTAAACGGATCTGTGTTCTT | + |
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Preference number: 1 (lower is better) Translates to: HGNVVSWKCGILYNE*FNVLALVSKRICVL Trigger: AAGAACACAGATCCGTTTACTAACTAAAGCAAGGACATTGAAGCATTCGTTGTACAGGATGCCACACTTCCAGGAGACTACGTTTCCGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
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| 3UTR TCA 90 bp | ATCAATGACACAAGCCAAAATCATCTGAGAGGAGGGAATCACAATTaGGAAAATGCCTTCCTAAGATCAGTCTGTAGGCAAGATAATGCT | + |
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Preference number: 1 (lower is better) Translates to: INDTSQNHLRGGNHN*ENAFLRSVCRQDNA Trigger: AGCATTATCTTGCCTACAGACTGATCTTAGGAAGGCATTTTCTCAATTGTGATTCCCTCCTCTCAGATGATTTTGGCTTGTGTCATTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
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| 3UTR TCA 90 bp | TATGGCCAGGAAAATGACTGCATATCACAACCTTCCAGACAGAGTTaGTTATCAGACTTTGTTGAAGTAACTATGGGCTTATTGAAGGAA | + |
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Preference number: 1 (lower is better) Translates to: YGQENDCISQPSRQS*LSDFVEVTMGLLKE Trigger: TTCCTTCAATAAGCCCATAGTTACTTCAACAAAGTCTGATAATCAACTCTGTCTGGAAGGTTGTGATATGCAGTCATTTTCCTGGCCATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
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| 3UTR TCA 90 bp | CTCTTAGAAAGGAAAGCATTTAATTGGGGCTTTTCTTACAGTTTCTaGGAGTTAGTTTATTATCATCATGGTGGGAAGTTTGGTAGCAAG | + |
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Preference number: 1 (lower is better) Translates to: LLERKAFNWGFSYSF*ELVYYHHGGKFGSK Trigger: CTTGCTACCAAACTTCCCACCATGATGATAATAAACTAACTCTCAGAAACTGTAAGAAAAGCCCCAATTAAATGCTTTCCTTTCTAAGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
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| 3UTR GCA 90 bp | TGGAACACAGTCTTAGTGGTTTTCCTACTTGTCTTAGAGTTTTCTTaGAATGAAGAGATACTAAGACCAAGATATCTCTTAGAAAGGAAA | + |
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Preference number: 1 (lower is better) Translates to: WNTVLVVFLLVLEFS*NEEILRPRYLLERK Trigger: TTTCCTTTCTAAGAGATATCTTGGTCTTAGTATCTCTTCATTGCAAGAAAACTCTAAGACAAGTAGGAAAACCACTAAGACTGTGTTCCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
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| 3UTR-3UTR TCA 90 bp | CAATTCCCGCCAACTCTACGCCCATCTGTCAGAACCCCTGACTCCCACGGATTGGGCTTCCATGGGCTGTaGGATAGAGGAAAGATCTCT | + |
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Preference number: 2 (lower is better) Translates to: QFPPTLRPSVRTPDSHGLGFHGL*DRGKIS Trigger: AGAGATCTTTCCTCTATCTCACAGCCCATGGAAGCC...CAATCCGTGGGAGTCAGGGGTTCTGACAGATGGGCGTAGAGTTGGCGGGAATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
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| 3UTR-3UTR TCA 90 bp | AAGGAAGTGAGAAGGCTCACTGCTACATCCACTCCAGTAGTGACAAGCGCGACAATCTGTCAGAACCCCTaGCTCCCACGGATTGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: KEVRRLTATSTPVVTSATICQNP*LPRIEG Trigger: CCCCTCAATCCGTGGGAGTCAGGGGTTCTGACAGAT...TGTCGCGCTTGTCACTACTGGAGTGGATGTAGCAGTGAGCCTTCTCACTTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
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| 3UTR-3UTR TCA 90 bp | TCTTGCCCTCCATATATGGGCAGTGGCTCAGTGACTCAGTGCATTCTTCACTTCTGGGCAGTGGCTCAGTaGCTCAGTGCATTCTTCACT | + |
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Preference number: 2 (lower is better) Translates to: SCPPYMGSGSVTQCILHFWAVAQ*LSAFFT Trigger: AGTGAAGAATGCACTGAGTCACTGAGCCACTGCCCA...GAAGTGAAGAATGCACTGAGTCACTGAGCCACTGCCCATATATGGAGGGCAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
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| 3UTR-3UTR TCA 90 bp | AAGGAAGTGAGAAGGCTCACTGCTACATCCACTCCAGTAGTGACAAGCGCGACATGCAGCCCTTGCCCCTaGCTTCTAAGATTAAGTGGA | + |
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Preference number: 2 (lower is better) Translates to: KEVRRLTATSTPVVTSATCSPCP*LLRLSG Trigger: TCCACTTAATCTTAGAAGTCAGGGGCAAGGGCTGCA...TGTCGCGCTTGTCACTACTGGAGTGGATGTAGCAGTGAGCCTTCTCACTTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
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| 3UTR-3UTR TCA 90 bp | AGGTCCACTGACCTTAGTCTAATTCCTTCCAACTTTCCCCGTCACCTTCCTTCTTGGGCAGTGGCTCAGTaGCTCAGTGCATTCTTCACT | + |
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Preference number: 2 (lower is better) Translates to: RSTDLSLIPSNFPRHLPSWAVAQ*LSAFFT Trigger: AGTGAAGAATGCACTGAGTCACTGAGCCACTGCCCA...AGAAGGAAGGTGACGGGGAAAGTTGGAAGGAATTAGACTAAGGTCAGTGGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
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| 3UTR CAA 90 bp | TCGTGGCAGTTCACCAGCTTCTCAGGTTACACGAAGAGTGAACAGTaGCTGGGATTGGGAATGGGGAAGAGACTCTTCAGTTGTACAGAT | + |
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Preference number: 2 (lower is better) Translates to: SWQFTSFSGYTKSEQ*LGLGMGKRLFSCTD Trigger: ATCTGTACAACTGAAGAGTCTCTTCCCCATTCCCAATCCCAGCAACTGTTCACTCTTCGTGTAACCTGAGAAGCTGGTGAACTGCCACGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
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| 3UTR-3UTR CCA 90 bp | GTTGCTGGGATTGGGAATGGGGAAGAGACTCTTCAGTTGTACAGATGCTGCCTGTATCCACAACCAATTTaGAGGTCTCAGCAGTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: VAGIGNGEETLQLYRCCLYPQPI*RSQQSR Trigger: TCTGGACTGCTGAGACCTCCAAATTGGTTGTGGATA...CAGGCAGCATCTGTACAACTGAAGAGTCTCTTCCCCATTCCCAATCCCAGCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
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| 3UTR-3UTR CCA 90 bp | AAGGAAGTGAGAAGGCTCACTGCTACATCCACTCCAGTAGTGACAAGCGCGACATGGCTCCAGTGTCTTTaGAATCACCTATGTTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: KEVRRLTATSTPVVTSATWLQCL*NHLCSS Trigger: AGAAGAACATAGGTGATTCCAAAGACACTGGAGCCA...TGTCGCGCTTGTCACTACTGGAGTGGATGTAGCAGTGAGCCTTCTCACTTCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
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| 3UTR-3UTR TCA 90 bp | CTAAGCAGCCAAAGGTTCTTACTCCAAAGGGTCATGGTGTTTCATCATAGCAATGTTGCCTCAAGGAAGTaGGAAGGCTCACTGCTACAT | + |
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Preference number: 2 (lower is better) Translates to: LSSQRFLLQRVMVFHHSNVASRK*EGSLLH Trigger: ATGTAGCAGTGAGCCTTCTCACTTCCTTGAGGCAAC...ATTGCTATGATGAAACACCATGACCCTTTGGAGTAAGAACCTTTGGCTGCTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
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| 3UTR-3UTR GCA 90 bp | TTATCCACAACCAATTTGGAGGTCTCAGCAGTCCAGAATATAGGTCCACTGACCGGCTCAGTGACTCAGTaGATTCTTCACTTCTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: LSTTNLEVSAVQNIGPLTGSVTQ*ILHFFL Trigger: CAGAAAGAAGTGAAGAATGCACTGAGTCACTGAGCC...GGTCAGTGGACCTATATTCTGGACTGCTGAGACCTCCAAATTGGTTGTGGATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
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| 3UTR-3UTR CCA 90 bp | CTGACTTCTAAGATTAAGTGGACCTTAGGTGGAGCTGCTTTTGATTCCCAGTTGTCCAGCACACTTCCTTaGGTCCAGTCTGTTTGTTAC | + |
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Preference number: 2 (lower is better) Translates to: LTSKIKWTLGGAAFDSQLSSTLP*VQSVCY Trigger: GTAACAAACAGACTGGACCCAAGGAAGTGTGCTGGA...CAACTGGGAATCAAAAGCAGCTCCACCTAAGGTCCACTTAATCTTAGAAGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
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| 3UTR CAA 90 bp | TGGTGTTTCATCATAGCAATGATTACTATGGGAGAGAGATTAACGTaGCCTCAAGGAAGTGAGAAGGCTCACTGCTACATCCACTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: WCFIIAMITMGERLT*PQGSEKAHCYIHSS Trigger: ACTGGAGTGGATGTAGCAGTGAGCCTTCTCACTTCCTTGAGGCAACGTTAATCTCTCTCCCATAGTAATCATTGCTATGATGAAACACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
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| 3UTR CAA 90 bp | TCTAAGATTAAGTGGACCTTAGGTGGAGCTGCTTTTGATTCCCAGTaGTTAACACTGAATTTTATCCCAGTTGGTTCCTGCCAGTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: SKIKWTLGGAAFDSQ*LTLNFIPVGSCQSF Trigger: GAAGGACTGGCAGGAACCAACTGGGATAAAATTCAGTGTTAACAACTGGGAATCAAAAGCAGCTCCACCTAAGGTCCACTTAATCTTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
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| 3UTR CAA 90 bp | CTGTGTTTGGATTCCTCTGTTTTATGTAAGCTTCAGGTAACCTCATaGTACCTTGCTGACGTGTCACCTAACTTCCCTATTTTCTTCTGT | + |
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Preference number: 2 (lower is better) Translates to: LCLDSSVLCKLQVTS*YLADVSPNFPIFFC Trigger: ACAGAAGAAAATAGGGAAGTTAGGTGACACGTCAGCAAGGTACAATGAGGTTACCTGAAGCTTACATAAAACAGAGGAATCCAAACACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
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| 3UTR CAA 90 bp | GTCTACTTTCAGTTCCTGCCTTGGCTTCCTTCAATAGACTTTGACTaGGAACACAGTCTTAGTGGTTTTCCTACTTGTCTTAGAGTTTTC | + |
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Preference number: 2 (lower is better) Translates to: VYFQFLPWLPSIDFD*EHSLSGFPTCLRVF Trigger: GAAAACTCTAAGACAAGTAGGAAAACCACTAAGACTGTGTTCCAAGTCAAAGTCTATTGAAGGAAGCCAAGGCAGGAACTGAAAGTAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
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| 3UTR-3UTR CCA 90 bp | CTAAGCAGCCAAAGGTTCTTACTCCAAAGGGTCATGGTGTTTCATCATAGCAATTACAATAGACTAGAATaGGAACTATGGCAAGGGCAT | + |
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Preference number: 2 (lower is better) Translates to: LSSQRFLLQRVMVFHHSNYNRLE*ELWQGH Trigger: ATGCCCTTGCCATAGTTCCCATTCTAGTCTATTGTA...ATTGCTATGATGAAACACCATGACCCTTTGGAGTAAGAACCTTTGGCTGCTTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
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| 3UTR CAA 90 bp | TTTCAAGTAATGCCATATGGCAGACAGACTGAGGCTAGAAAAACCTaGTTTTGTGTTCTTATGGAGTCTGAAGATAGGAAGATTTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: FQVMPYGRQTEARKT*FCVLMESEDRKISQ Trigger: CTGAGAAATCTTCCTATCTTCAGACTCCATAAGAACACAAAACAAGGTTTTTCTAGCCTCAGTCTGTCTGCCATATGGCATTACTTGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
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| 3UTR CAA 90 bp | GCTGACGTGTCACCTAACTTCCCTATTTTCTTCTGTATAAAAAGTTaGATGCTTGATTTGACAAAGTACATTCAGATCCAGCACACTTCC | + |
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Preference number: 2 (lower is better) Translates to: ADVSPNFPIFFCIKS*MLDLTKYIQIQHTS Trigger: GGAAGTGTGCTGGATCTGAATGTACTTTGTCAAATCAAGCATCAAACTTTTTATACAGAAGAAAATAGGGAAGTTAGGTGACACGTCAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
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| 3UTR-3UTR GCA 90 bp | AGAAAAACCTTGTTTTGTGTTCTTATGGAGTCTGAAGATAGGAAGATTTCTCAGGGCCAGGAAAATGACTaGATATCACAACCTTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: RKTLFCVLMESEDRKISQGQEND*ISQPSR Trigger: TCTGGAAGGTTGTGATATGCAGTCATTTTCCTGGCC...CTGAGAAATCTTCCTATCTTCAGACTCCATAAGAACACAAAACAAGGTTTTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
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| 3UTR TCA 72 bp | GTGGCAGTTCACCAGCTTCTCAGGTTACACGAAGAGTaGACAGTTGCTGGGATTGGGAATGGGGAAGAGACT | + |
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Preference number: 3 (lower is better) Translates to: VAVHQLLRLHEE*TVAGIGNGEET Trigger: AGTCTCTTCCCCATTCCCAATCCCAGCAACTGTTCACTCTTCGTGTAACCTGAGAAGCTGGTGAACTGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
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| 3UTR GCA 72 bp | AGATTAACGTTGCCTCAAGGAAGTGAGAAGGCTCACTaGTACATCCACTCCAGTAGTGACAAGCGCGACAGC | + |
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Preference number: 3 (lower is better) Translates to: RLTLPQGSEKAH*YIHSSSDKRDS Trigger: GCTGTCGCGCTTGTCACTACTGGAGTGGATGTAGCAGTGAGCCTTCTCACTTCCTTGAGGCAACGTTAATCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
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| 3UTR CCA 72 bp | GGCATGCAGCCCTTGCCCCTGACTTCTAAGATTAAGTaGACCTTAGGTGGAGCTGCTTTTGATTCCCAGTTG | + |
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Preference number: 3 (lower is better) Translates to: GMQPLPLTSKIK*TLGGAAFDSQL Trigger: CAACTGGGAATCAAAAGCAGCTCCACCTAAGGTCCACTTAATCTTAGAAGTCAGGGGCAAGGGCTGCATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
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| 3UTR-3UTR CAA 90 bp | TCCTTCTTGCCCTCCATATATGGGCAGTGGCTCAGTGACTCAGTGCATTCTTCATCTTCTCCAGCATCATaGTCTAGGGACAGCACCGAT | + |
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Preference number: 3 (lower is better) Translates to: SFLPSIYGQWLSDSVHSSSSPAS*SRDSTD Trigger: ATCGGTGCTGTCCCTAGACAATGATGCTGGAGAAGA...TGAAGAATGCACTGAGTCACTGAGCCACTGCCCATATATGGAGGGCAAGAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097973.3 ENSMUST00000107078.9 |
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| 3UTR-3UTR CAA 90 bp | TCTTGCCCTCCATATATGGGCAGTGGCTCAGTGACTCAGTGCATTCTTCACTTCTCTTCTCCAGCATCATaGTCTAGGGACAGCACCGAT | + |
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Preference number: 3 (lower is better) Translates to: SCPPYMGSGSVTQCILHFSSPAS*SRDSTD Trigger: ATCGGTGCTGTCCCTAGACAATGATGCTGGAGAAGA...GAAGTGAAGAATGCACTGAGTCACTGAGCCACTGCCCATATATGGAGGGCAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097973.3 ENSMUST00000107078.9 |
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| 3UTR CCA 72 bp | CCGTCACCTTCCTTCTTGCCCTCCATATATGGGCAGTaGCTCAGTGACTCAGTGCATTCTTCACTTCTTTCT | + |
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Preference number: 3 (lower is better) Translates to: PSPSFLPSIYGQ*LSDSVHSSLLS Trigger: AGAAAGAAGTGAAGAATGCACTGAGTCACTGAGCCACTGCCCATATATGGAGGGCAAGAAGGAAGGTGACGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
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| 3UTR GCA 72 bp | TCACCAGCTTCTCAGGTTACACGAAGAGTGAACAGTTaGTGGGATTGGGAATGGGGAAGAGACTCTTCAGTT | + |
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Preference number: 3 (lower is better) Translates to: SPASQVTRRVNS*WDWEWGRDSSV Trigger: AACTGAAGAGTCTCTTCCCCATTCCCAATCCCAGCAACTGTTCACTCTTCGTGTAACCTGAGAAGCTGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
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| 3UTR CCA 72 bp | GTTACACGAAGAGTGAACAGTTGCTGGGATTGGGAATaGGGAAGAGACTCTTCAGTTGTACAGATGCTGCCT | + |
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Preference number: 3 (lower is better) Translates to: VTRRVNSCWDWE*GRDSSVVQMLP Trigger: AGGCAGCATCTGTACAACTGAAGAGTCTCTTCCCCATTCCCAATCCCAGCAACTGTTCACTCTTCGTGTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
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| 3UTR-3UTR CAA 90 bp | GAGCATGTAAGTGATTTATCCACAACCAATTTGGAGGTCTCAGCAGTCCAGAATCCGTCACCTTCCTTCTaGCCCTCCATATATGGGCAG | + |
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Preference number: 3 (lower is better) Translates to: EHVSDLSTTNLEVSAVQNPSPSF*PSIYGQ Trigger: CTGCCCATATATGGAGGGCAAGAAGGAAGGTGACGG...ATTCTGGACTGCTGAGACCTCCAAATTGGTTGTGGATAAATCACTTACATGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
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| 3UTR-3UTR CAA 90 bp | TTATCCACAACCAATTTGGAGGTCTCAGCAGTCCAGAATATAGGTCCACTGACCTTATCCACAACCAATTaGGAGGTCTCAGCAGTCCAG | + |
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Preference number: 3 (lower is better) Translates to: LSTTNLEVSAVQNIGPLTLSTTN*EVSAVQ Trigger: CTGGACTGCTGAGACCTCCAAATTGGTTGTGGATAA...GGTCAGTGGACCTATATTCTGGACTGCTGAGACCTCCAAATTGGTTGTGGATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
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| 3UTR GCA 72 bp | TGCCCTCCATATATGGGCAGTGGCTCAGTGACTCAGTaGATTCTTCACTTCTTTCTGCTCTCCTTTTCTTCT | + |
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Preference number: 3 (lower is better) Translates to: CPPYMGSGSVTQ*ILHFFLLSFSS Trigger: AGAAGAAAAGGAGAGCAGAAAGAAGTGAAGAATGCACTGAGTCACTGAGCCACTGCCCATATATGGAGGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
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| 3UTR TCA 72 bp | ACAATGCTCCATAGCCTTTGTATCAGCTCTTGGCTATaGGTTCCTGTCTACTTTCAGTTCCTGCCTTGGCTT | + |
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Preference number: 3 (lower is better) Translates to: TMLHSLCISSWL*VPVYFQFLPWL Trigger: AAGCCAAGGCAGGAACTGAAAGTAGACAGGAACTCATAGCCAAGAGCTGATACAAAGGCTATGGAGCATTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
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| 3UTR-3UTR CAA 90 bp | CTAAGCAGCCAAAGGTTCTTACTCCAAAGGGTCATGGTGTTTCATCATAGCAATTTATCCACAACCAATTaGGAGGTCTCAGCAGTCCAG | + |
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Preference number: 3 (lower is better) Translates to: LSSQRFLLQRVMVFHHSNLSTTN*EVSAVQ Trigger: CTGGACTGCTGAGACCTCCAAATTGGTTGTGGATAA...ATTGCTATGATGAAACACCATGACCCTTTGGAGTAAGAACCTTTGGCTGCTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
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| 3UTR-3UTR CAA 90 bp | GGGAAGAGACTCTTCAGTTGTACAGATGCTGCCTGTAAATTAAGCAGGGAACTTTTGGCTCCAGTGTCTTaGGAATCACCTATGTTCTTC | + |
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Preference number: 3 (lower is better) Translates to: GKRLFSCTDAACKLSRELLAPVS*ESPMFF Trigger: GAAGAACATAGGTGATTCCAAAGACACTGGAGCCAA...AAGTTCCCTGCTTAATTTACAGGCAGCATCTGTACAACTGAAGAGTCTCTTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
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| 3UTR GCA 72 bp | GTAGTCTCCTGGAAGTGTGGCATCCTGTACAACGAATaGTTCAATGTCCTTGCTTTAGTTAGTAAACGGATC | + |
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Preference number: 3 (lower is better) Translates to: VVSWKCGILYNE*FNVLALVSKRI Trigger: GATCCGTTTACTAACTAAAGCAAGGACATTGAAGCATTCGTTGTACAGGATGCCACACTTCCAGGAGACTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
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| 3UTR-3UTR CAA 90 bp | CTGACTTCTAAGATTAAGTGGACCTTAGGTGGAGCTGCTTTTGATTCCCAGTTGGCCATATGCTCTCTTTaGTTTTGCAGACTCCACTTA | + |
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Preference number: 3 (lower is better) Translates to: LTSKIKWTLGGAAFDSQLAICSL*FCRLHL Trigger: TAAGTGGAGTCTGCAAAACAAAAGAGAGCATATGGC...CAACTGGGAATCAAAAGCAGCTCCACCTAAGGTCCACTTAATCTTAGAAGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
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| 3UTR TCA 72 bp | ACAAGCCAAAATCATCTGAGAGGAGGGAATCACAATTaGGAAAATGCCTTCCTAAGATCAGTCTGTAGGCAA | + |
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Preference number: 3 (lower is better) Translates to: TSQNHLRGGNHN*ENAFLRSVCRQ Trigger: TTGCCTACAGACTGATCTTAGGAAGGCATTTTCTCAATTGTGATTCCCTCCTCTCAGATGATTTTGGCTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
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| 3UTR GCA 72 bp | CAGTTGTTAACACTGAATTTTATCCCAGTTGGTTCCTaGCAGTCCTTCTGTGTTTGGATTCCTCTGTTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: QLLTLNFIPVGS*QSFCVWIPLFY Trigger: ATAAAACAGAGGAATCCAAACACAGAAGGACTGGCAGGAACCAACTGGGATAAAATTCAGTGTTAACAACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| 3UTR CCA 72 bp | TATATGTATATGACCTCAAGACTGACCTCTAGATATTaGATAAGCAATTGGGGAGAACTGTACCCTCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: YMYMTSRLTSRY*ISNWGELYPQE Trigger: TTCCTGAGGGTACAGTTCTCCCCAATTGCTTATCCAATATCTAGAGGTCAGTCTTGAGGTCATATACATATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132513.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAAAAACCTTGTTTTGTGTTCTTATGGAGTCTGAAGATAGGAAGATTTCTCAGATGCTCTCTTTTGTTTaGCAGACTCCACTTATGGCC | + |
|
Preference number: 3 (lower is better) Translates to: RKTLFCVLMESEDRKISQMLSFV*QTPLMA Trigger: GGCCATAAGTGGAGTCTGCAAAACAAAAGAGAGCAT...CTGAGAAATCTTCCTATCTTCAGACTCCATAAGAACACAAAACAAGGTTTTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| 3UTR TCA 72 bp | ACAACCTTCCAGACAGAGTTGATTATCAGACTTTGTTaGAGTAACTATGGGCTTATTGAAGGAAATGTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: TTFQTELIIRLC*SNYGLIEGNVS Trigger: TGACACATTTCCTTCAATAAGCCCATAGTTACTTCAACAAAGTCTGATAATCAACTCTGTCTGGAAGGTTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| 3UTR TCA 72 bp | GAAAATGACTGCATATCACAACCTTCCAGACAGAGTTaGTTATCAGACTTTGTTGAAGTAACTATGGGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: ENDCISQPSRQS*LSDFVEVTMGL Trigger: TAAGCCCATAGTTACTTCAACAAAGTCTGATAATCAACTCTGTCTGGAAGGTTGTGATATGCAGTCATTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| 3UTR CCA 72 bp | AGACTGAGGCTAGAAAAACCTTGTTTTGTGTTCTTATaGAGTCTGAAGATAGGAAGATTTCTCAGTTCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: RLRLEKPCFVFL*SLKIGRFLSSE Trigger: TTCAGAACTGAGAAATCTTCCTATCTTCAGACTCCATAAGAACACAAAACAAGGTTTTTCTAGCCTCAGTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| 3UTR TCA 72 bp | CTTATGGAGTCTGAAGATAGGAAGATTTCTCAGTTCTaGATTTTATTCATTCCATCAGATGGAACTATGAAC | + |
|
Preference number: 3 (lower is better) Translates to: LMESEDRKISQF*ILFIPSDGTMN Trigger: GTTCATAGTTCCATCTGATGGAATGAATAAAATTCAGAACTGAGAAATCTTCCTATCTTCAGACTCCATAAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| 3UTR TCA 72 bp | AGTGGTTTTCCTACTTGTCTTAGAGTTTTCTTGCAATaGAGAGATACTAAGACCAAGATATCTCTTAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SGFPTCLRVFLQ*RDTKTKISLRK Trigger: CTTTCTAAGAGATATCTTGGTCTTAGTATCTCTTCATTGCAAGAAAACTCTAAGACAAGTAGGAAAACCACT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| 3UTR GCA 72 bp | GTCTTAGTGGTTTTCCTACTTGTCTTAGAGTTTTCTTaGAATGAAGAGATACTAAGACCAAGATATCTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: VLVVFLLVLEFS*NEEILRPRYLL Trigger: TAAGAGATATCTTGGTCTTAGTATCTCTTCATTGCAAGAAAACTCTAAGACAAGTAGGAAAACCACTAAGAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| CDS-3UTR GCA 90 bp | CAATTCCCGCCAACTCTACGCCCATCTGTCAGAACCCCTGACTCCCACGGATTGCCGGAGATGGAGAGCTaGCCAGAAGGCAGCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QFPPTLRPSVRTPDSHGLPEMES*PEGSCQ Trigger: CTGGCAGCTGCCTTCTGGGCAGCTCTCCATCTCCGG...CAATCCGTGGGAGTCAGGGGTTCTGACAGATGGGCGTAGAGTTGGCGGGAATTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| CDS-3UTR GCA 90 bp | TCTTGCCCTCCATATATGGGCAGTGGCTCAGTGACTCAGTGCATTCTTCACTTCTGCCCAGAAGGCAGCTaGCAGGGAGTCCGCGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SCPPYMGSGSVTQCILHFCPEGS*QGVRGF Trigger: GAAGCCGCGGACTCCCTGGCAGCTGCCTTCTGGGCA...GAAGTGAAGAATGCACTGAGTCACTGAGCCACTGCCCATATATGGAGGGCAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS-3UTR GCA 90 bp | TCCTTCTTGCCCTCCATATATGGGCAGTGGCTCAGTGACTCAGTGCATTCTTCATGCCCAGAAGGCAGCTaGCAGGGAGTCCGCGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SFLPSIYGQWLSDSVHSSCPEGS*QGVRGF Trigger: GAAGCCGCGGACTCCCTGGCAGCTGCCTTCTGGGCA...TGAAGAATGCACTGAGTCACTGAGCCACTGCCCATATATGGAGGGCAAGAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS-3UTR CCA 90 bp | CCAACTTTCCCCGTCACCTTCCTTCTTGCCCTCCATATATGGGCAGTGGCTCAGCATTGGTGTAGGGCATaGAGTCTCTGTCAGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PTFPVTFLLALHIWAVAQHWCRA*SLCQPG Trigger: GCCTGGCTGACAGAGACTCCATGCCCTACACCAATG...CTGAGCCACTGCCCATATATGGAGGGCAAGAAGGAAGGTGACGGGGAAAGTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS-3UTR GCA 90 bp | ATATATGGGCAGTGGCTCAGTGACTCAGTGCATTCTTCACTTCTTTCTGCTCTCCCGGAGATGGAGAGCTaGCCAGAAGGCAGCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IYGQWLSDSVHSSLLSALPEMES*PEGSCQ Trigger: CTGGCAGCTGCCTTCTGGGCAGCTCTCCATCTCCGG...GAGAGCAGAAAGAAGTGAAGAATGCACTGAGTCACTGAGCCACTGCCCATATAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS-3UTR CCA 90 bp | TCTTGCCCTCCATATATGGGCAGTGGCTCAGTGACTCAGTGCATTCTTCACTTCAGCAGAGTCCGGAGATaGAGAGCTGCCCAGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SCPPYMGSGSVTQCILHFSRVRR*RAAQKA Trigger: TGCCTTCTGGGCAGCTCTCCATCTCCGGACTCTGCT...GAAGTGAAGAATGCACTGAGTCACTGAGCCACTGCCCATATATGGAGGGCAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS-3UTR GCA 90 bp | GGCAGACAGACTGAGGCTAGAAAAACCTTGTTTTGTGTTCTTATGGAGTCTGAATGCCCAGAAGGCAGCTaGCAGGGAGTCCGCGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GRQTEARKTLFCVLMESECPEGS*QGVRGF Trigger: GAAGCCGCGGACTCCCTGGCAGCTGCCTTCTGGGCA...TTCAGACTCCATAAGAACACAAAACAAGGTTTTTCTAGCCTCAGTCTGTCTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| CDS-3UTR CCA 90 bp | CCAACTTTCCCCGTCACCTTCCTTCTTGCCCTCCATATATGGGCAGTGGCTCAGGCCTGTACATTTTCTTaGACTTCTGGGTATAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PTFPVTFLLALHIWAVAQACTFS*TSGYRA Trigger: GGCCCTATACCCAGAAGTCCAAGAAAATGTACAGGC...CTGAGCCACTGCCCATATATGGAGGGCAAGAAGGAAGGTGACGGGGAAAGTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS-3UTR CCA 90 bp | CAATTCCCGCCAACTCTACGCCCATCTGTCAGAACCCCTGACTCCCACGGATTGCTCCAAAAAGTGCTCTaGATTGAAGATGTCTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QFPPTLRPSVRTPDSHGLLQKVL*IEDVWG Trigger: ACCCCAGACATCTTCAATCCAGAGCACTTTTTGGAG...CAATCCGTGGGAGTCAGGGGTTCTGACAGATGGGCGTAGAGTTGGCGGGAATTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| CDS-3UTR GCA 90 bp | ATATATGGGCAGTGGCTCAGTGACTCAGTGCATTCTTCACTTCTTTCTGCTCTCCCATCTGGAACGAGTTaGCCACAAAGGGCAAGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: IYGQWLSDSVHSSLLSALPSGTS*PQRASA Trigger: CGCGCTTGCCCTTTGTGGGCAACTCGTTCCAGATGG...GAGAGCAGAAAGAAGTGAAGAATGCACTGAGTCACTGAGCCACTGCCCATATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS-3UTR CCA 90 bp | ATATATGGGCAGTGGCTCAGTGACTCAGTGCATTCTTCACTTCTTTCTGCTCTCAGCAGAGTCCGGAGATaGAGAGCTGCCCAGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: IYGQWLSDSVHSSLLSALSRVRR*RAAQKA Trigger: TGCCTTCTGGGCAGCTCTCCATCTCCGGACTCTGCT...GAGAGCAGAAAGAAGTGAAGAATGCACTGAGTCACTGAGCCACTGCCCATATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS-3UTR CCA 90 bp | TTATCCACAACCAATTTGGAGGTCTCAGCAGTCCAGAATATAGGTCCACTGACCAGCAGAGTCCGGAGATaGAGAGCTGCCCAGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSTTNLEVSAVQNIGPLTSRVRR*RAAQKA Trigger: TGCCTTCTGGGCAGCTCTCCATCTCCGGACTCTGCT...GGTCAGTGGACCTATATTCTGGACTGCTGAGACCTCCAAATTGGTTGTGGATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS-3UTR CCA 90 bp | CCTCCATATATGGGCAGTGGCTCAGTGACTCAGTGCATTCTTCACTTCTTTCTGCATTGGTGTAGGGCATaGAGTCTCTGTCAGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PPYMGSGSVTQCILHFFLHWCRA*SLCQPG Trigger: GCCTGGCTGACAGAGACTCCATGCCCTACACCAATG...CAGAAAGAAGTGAAGAATGCACTGAGTCACTGAGCCACTGCCCATATATGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS-3UTR CCA 90 bp | TTTTCTTCTCCAGCATCATTGTCTAGGGACAGCACCGATGCGGTAGCTGACTGGCATGGACAACAGCATTaGTGTAGGGCATGGAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FSSPASLSRDSTDAVADWHGQQH*CRAWSL Trigger: GAGACTCCATGCCCTACACCAATGCTGTTGTCCATG...CCAGTCAGCTACCGCATCGGTGCTGTCCCTAGACAATGATGCTGGAGAAGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS-3UTR TCA 90 bp | AAGGAAGTGAGAAGGCTCACTGCTACATCCACTCCAGTAGTGACAAGCGCGACATTCTTCACAAACTTCTaGACTGCCAGATGCGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: KEVRRLTATSTPVVTSATFFTNF*TARCDC Trigger: GCAGTCGCATCTGGCAGTTCAGAAGTTTGTGAAGAA...TGTCGCGCTTGTCACTACTGGAGTGGATGTAGCAGTGAGCCTTCTCACTTCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| CDS-3UTR TCA 90 bp | CCAACTTTCCCCGTCACCTTCCTTCTTGCCCTCCATATATGGGCAGTGGCTCAGAGCTCGCTTTCCCATTaGAAATGGCAGAAAAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: PTFPVTFLLALHIWAVAQSSLSH*KWQKRF Trigger: GAATCTTTTCTGCCATTTTCAATGGGAAAGCGAGCT...CTGAGCCACTGCCCATATATGGAGGGCAAGAAGGAAGGTGACGGGGAAAGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| CDS-3UTR GCA 90 bp | CTGACTTCTAAGATTAAGTGGACCTTAGGTGGAGCTGCTTTTGATTCCCAGTTGCCATCTGGAACGAGTTaGCCACAAAGGGCAAGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: LTSKIKWTLGGAAFDSQLPSGTS*PQRASA Trigger: CGCGCTTGCCCTTTGTGGGCAACTCGTTCCAGATGG...CAACTGGGAATCAAAAGCAGCTCCACCTAAGGTCCACTTAATCTTAGAAGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| CDS-3UTR GCA 90 bp | TTTATCCACAACCAATTTGGAGGTCTCAGCAGTCCAGAATATAGGTCCACTGACCCATCTGGAACGAGTTaGCCACAAAGGGCAAGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: FIHNQFGGLSSPEYRSTDPSGTS*PQRASA Trigger: CGCGCTTGCCCTTTGTGGGCAACTCGTTCCAGATGG...GTCAGTGGACCTATATTCTGGACTGCTGAGACCTCCAAATTGGTTGTGGATAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS-3UTR GCA 90 bp | GTTGCTGGGATTGGGAATGGGGAAGAGACTCTTCAGTTGTACAGATGCTGCCTGCACAAACTTCTGAACTaGCAGATGCGACTGCGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: VAGIGNGEETLQLYRCCLHKLLN*QMRLRQ Trigger: TTGACGCAGTCGCATCTGGCAGTTCAGAAGTTTGTG...CAGGCAGCATCTGTACAACTGAAGAGTCTCTTCCCCATTCCCAATCCCAGCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| CDS-3UTR GCA 90 bp | CCAACTTTCCCCGTCACCTTCCTTCTTGCCCTCCATATATGGGCAGTGGCTCAGCTTGCCTGGGTACTTTaGCATTTCATTGAGAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PTFPVTFLLALHIWAVAQLAWVL*HFIEKS Trigger: GCTTTTCTCAATGAAATGGCAAAGTACCCAGGCAAG...CTGAGCCACTGCCCATATATGGAGGGCAAGAAGGAAGGTGACGGGGAAAGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 |
||
| CDS-3UTR GCA 90 bp | CAATTCCCGCCAACTCTACGCCCATCTGTCAGAACCCCTGACTCCCACGGATTGCCATTCTCCAAAAAGTaGTCTGGATTGAAGATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QFPPTLRPSVRTPDSHGLPFSKK*SGLKMS Trigger: AGACATCTTCAATCCAGAGCACTTTTTGGAGAATGG...CAATCCGTGGGAGTCAGGGGTTCTGACAGATGGGCGTAGAGTTGGCGGGAATTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| CDS-3UTR CCA 90 bp | TTTTCTTCTCCAGCATCATTGTCTAGGGACAGCACCGATGCGGTAGCTGACTGGGCCTGTACATTTTCTTaGACTTCTGGGTATAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FSSPASLSRDSTDAVADWACTFS*TSGYRA Trigger: GGCCCTATACCCAGAAGTCCAAGAAAATGTACAGGC...CCAGTCAGCTACCGCATCGGTGCTGTCCCTAGACAATGATGCTGGAGAAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| 3UTR CAA 72 bp | TCTAATTCCTTCCAACTTTCCCCGTCACCTTCCTTCTaGCCCTCCATATATGGGCAGTGGCTCAGTGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: SNSFQLSPSPSF*PSIYGQWLSDS Trigger: TGAGTCACTGAGCCACTGCCCATATATGGAGGGCAAGAAGGAAGGTGACGGGGAAAGTTGGAAGGAATTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS-3UTR GCA 90 bp | TCTTGCCCTCCATATATGGGCAGTGGCTCAGTGACTCAGTGCATTCTTCACTTCCACAAACTTCTGAACTaGCAGATGCGACTGCGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SCPPYMGSGSVTQCILHFHKLLN*QMRLRQ Trigger: TTGACGCAGTCGCATCTGGCAGTTCAGAAGTTTGTG...GAAGTGAAGAATGCACTGAGTCACTGAGCCACTGCCCATATATGGAGGGCAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS-3UTR GCA 90 bp | GGGAGAACTGTACCCTCAGGAAGACCATTTTTCCCTCTCTCCACAGTCCCCAGTCTTGCCTGGGTACTTTaGCATTTCATTGAGAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRTVPSGRPFFPLSTVPSLAWVL*HFIEKS Trigger: GCTTTTCTCAATGAAATGGCAAAGTACCCAGGCAAG...ACTGGGGACTGTGGAGAGAGGGAAAAATGGTCTTCCTGAGGGTACAGTTCTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000132513.8 |
||
| CDS-3UTR CCA 90 bp | GTCCGTTTCCTTTTCTTCAGGTCTTGTTTAGCCAACCAAAAGAGTTTGCCACTCCATTGGTGTAGGGCATaGAGTCTCTGTCAGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VRFLFFRSCLANQKSLPLHWCRA*SLCQPG Trigger: GCCTGGCTGACAGAGACTCCATGCCCTACACCAATG...GAGTGGCAAACTCTTTTGGTTGGCTAAACAAGACCTGAAGAAAAGGAAACGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132513.8 |
||
| CDS-3UTR CCA 90 bp | TCTTGCCCTCCATATATGGGCAGTGGCTCAGTGACTCAGTGCATTCTTCACTTCAAGCTCGCTTTCCTTTaGCAAGTGAAATCCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SCPPYMGSGSVTQCILHFKLAFL*QVKSSQ Trigger: CTGGCTGGATTTCACTTGCCAAAGGAAAGCGAGCTT...GAAGTGAAGAATGCACTGAGTCACTGAGCCACTGCCCATATATGGAGGGCAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| 3UTR CAA 72 bp | TTCACCAGCTTCTCAGGTTACACGAAGAGTGAACAGTaGCTGGGATTGGGAATGGGGAAGAGACTCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FTSFSGYTKSEQ*LGLGMGKRLFS Trigger: ACTGAAGAGTCTCTTCCCCATTCCCAATCCCAGCAACTGTTCACTCTTCGTGTAACCTGAGAAGCTGGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| CDS-3UTR TCA 90 bp | CCTCCATATATGGGCAGTGGCTCAGTGACTCAGTGCATTCTTCACTTCTTTCTGTTCTTCACAAACTTCTaGACTGCCAGATGCGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: PPYMGSGSVTQCILHFFLFFTNF*TARCDC Trigger: GCAGTCGCATCTGGCAGTTCAGAAGTTTGTGAAGAA...CAGAAAGAAGTGAAGAATGCACTGAGTCACTGAGCCACTGCCCATATATGGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS-3UTR TCA 90 bp | TTCTTGCCCTCCATATATGGGCAGTGGCTCAGTGACTCAGTGCATTCTTCACTTTTCTTCACAAACTTCTaGACTGCCAGATGCGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: FLPSIYGQWLSDSVHSSLFFTNF*TARCDC Trigger: GCAGTCGCATCTGGCAGTTCAGAAGTTTGTGAAGAA...AAGTGAAGAATGCACTGAGTCACTGAGCCACTGCCCATATATGGAGGGCAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS-3UTR CCA 90 bp | TCCTTCTTGCCCTCCATATATGGGCAGTGGCTCAGTGACTCAGTGCATTCTTCATCCATGTCTGGCCACTaGAGAAGATCAATCCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: SFLPSIYGQWLSDSVHSSSMSGH*RRSIHF Trigger: GAAATGGATTGATCTTCTCCAGTGGCCAGACATGGA...TGAAGAATGCACTGAGTCACTGAGCCACTGCCCATATATGGAGGGCAAGAAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS-3UTR CCA 90 bp | ATTCCTTCCAACTTTCCCCGTCACCTTCCTTCTTGCCCTCCATATATGGGCAGTGTAGCCAACAATGTTTaGTGTTGTCCTGGGAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: IPSNFPRHLPSCPPYMGSVANNV*CCPGRC Trigger: ACATCTCCCAGGACAACACCAAACATTGTTGGCTAC...ACTGCCCATATATGGAGGGCAAGAAGGAAGGTGACGGGGAAAGTTGGAAGGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 |
||
| CDS-3UTR CCA 90 bp | GAGCATGTAAGTGATTTATCCACAACCAATTTGGAGGTCTCAGCAGTCCAGAATCATTGGTGTAGGGCATaGAGTCTCTGTCAGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EHVSDLSTTNLEVSAVQNHWCRA*SLCQPG Trigger: GCCTGGCTGACAGAGACTCCATGCCCTACACCAATG...ATTCTGGACTGCTGAGACCTCCAAATTGGTTGTGGATAAATCACTTACATGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS-3UTR CCA 90 bp | TTATCCACAACCAATTTGGAGGTCTCAGCAGTCCAGAATATAGGTCCACTGACCCATGGACAACAGCATTaGTGTAGGGCATGGAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSTTNLEVSAVQNIGPLTHGQQH*CRAWSL Trigger: GAGACTCCATGCCCTACACCAATGCTGTTGTCCATG...GGTCAGTGGACCTATATTCTGGACTGCTGAGACCTCCAAATTGGTTGTGGATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS-3UTR TCA 90 bp | GCCAGGAAAATGACTGCATATCACAACCTTCCAGACAGAGTTGATTATCAGACTAAAAGTGCTCTGGATTaGAGATGTCTGGGGTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ARKMTAYHNLPDRVDYQTKSALD*RCLGWP Trigger: GGGCCACCCCAGACATCTTCAATCCAGAGCACTTTT...AGTCTGATAATCAACTCTGTCTGGAAGGTTGTGATATGCAGTCATTTTCCTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| CDS-3UTR GCA 90 bp | TCTTGCCCTCCATATATGGGCAGTGGCTCAGTGACTCAGTGCATTCTTCACTTCCTTGCCTGGGTACTTTaGCATTTCATTGAGAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SCPPYMGSGSVTQCILHFLAWVL*HFIEKS Trigger: GCTTTTCTCAATGAAATGGCAAAGTACCCAGGCAAG...GAAGTGAAGAATGCACTGAGTCACTGAGCCACTGCCCATATATGGAGGGCAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 |
||
| CDS-3UTR GCA 90 bp | ATTGGGGAGAACTGTACCCTCAGGAAGACCATTTTTCCCTCTCTCCACAGTCCCTCAGAGGGACACTATTaGCCATTCTCAGAATTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: IGENCTLRKTIFPSLHSPSEGHY*PFSEFH Trigger: ATGAAATTCTGAGAATGGGCAATAGTGTCCCTCTGA...GGGACTGTGGAGAGAGGGAAAAATGGTCTTCCTGAGGGTACAGTTCTCCCCAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132513.8 |
||
| CDS-3UTR CCA 90 bp | AGGTCCACTGACCTTAGTCTAATTCCTTCCAACTTTCCCCGTCACCTTCCTTCTGTAGCCAACAATGTTTaGTGTTGTCCTGGGAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: RSTDLSLIPSNFPRHLPSVANNV*CCPGRC Trigger: ACATCTCCCAGGACAACACCAAACATTGTTGGCTAC...AGAAGGAAGGTGACGGGGAAAGTTGGAAGGAATTAGACTAAGGTCAGTGGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 |
||
| CDS-3UTR CCA 90 bp | TTATCCACAACCAATTTGGAGGTCTCAGCAGTCCAGAATATAGGTCCACTGACCGCCTGTACATTTTCTTaGACTTCTGGGTATAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSTTNLEVSAVQNIGPLTACTFS*TSGYRA Trigger: GGCCCTATACCCAGAAGTCCAAGAAAATGTACAGGC...GGTCAGTGGACCTATATTCTGGACTGCTGAGACCTCCAAATTGGTTGTGGATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS-3UTR CCA 90 bp | GAGTTTGCCACTCTCCTGCTAGTTGGTAGAAAGCACATGCTGTTCTATGAGCTTGCCTGTACATTTTCTTaGACTTCTGGGTATAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: EFATLLLVGRKHMLFYELACTFS*TSGYRA Trigger: GGCCCTATACCCAGAAGTCCAAGAAAATGTACAGGC...AAGCTCATAGAACAGCATGTGCTTTCTACCAACTAGCAGGAGAGTGGCAAACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132513.8 |
||
| CDS-3UTR CCA 90 bp | AATAAAATTCCTGGCTCACCAAGCTGGATTTTGTGTGGTCTATTGTGCCCTGTCCATGGACAACAGCATTaGTGTAGGGCATGGAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NKIPGSPSWILCGLLCPVHGQQH*CRAWSL Trigger: GAGACTCCATGCCCTACACCAATGCTGTTGTCCATG...GACAGGGCACAATAGACCACACAAAATCCAGCTTGGTGAGCCAGGAATTTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| CDS-3UTR CCA 90 bp | TGTCTAGTGTTGAGGCCCCGTGAGATTTCTCCATTTCATGTTCTTTTTGTCCGTCATGGACAACAGCATTaGTGTAGGGCATGGAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CLVLRPREISPFHVLFVRHGQQH*CRAWSL Trigger: GAGACTCCATGCCCTACACCAATGCTGTTGTCCATG...ACGGACAAAAAGAACATGAAATGGAGAAATCTCACGGGGCCTCAACACTAGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132513.8 |
||
| CDS-3UTR CCA 90 bp | TTATCCACAACCAATTTGGAGGTCTCAGCAGTCCAGAATATAGGTCCACTGACCTGGATTGAAGATGTCTaGGGTGGCCCATTCTTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSTTNLEVSAVQNIGPLTWIEDV*GGPFFR Trigger: CCTAAAGAATGGGCCACCCCAGACATCTTCAATCCA...GGTCAGTGGACCTATATTCTGGACTGCTGAGACCTCCAAATTGGTTGTGGATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| 3UTR CAA 72 bp | GATTTGACAAAGTACATTCAGATCCAGCACACTTCCTaGGGTCCAGTCTGTTTGTTACCCCAATTCCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DLTKYIQIQHTS*GPVCLLPQFPP Trigger: TGGCGGGAATTGGGGTAACAAACAGACTGGACCCAAGGAAGTGTGCTGGATCTGAATGTACTTTGTCAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| CDS-3UTR GCA 90 bp | TCCTTCTTGCCCTCCATATATGGGCAGTGGCTCAGTGACTCAGTGCATTCTTCATCAGAGGGACACTATTaGCCATTCTCAGAATTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SFLPSIYGQWLSDSVHSSSEGHY*PFSEFH Trigger: ATGAAATTCTGAGAATGGGCAATAGTGTCCCTCTGA...TGAAGAATGCACTGAGTCACTGAGCCACTGCCCATATATGGAGGGCAAGAAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS-3UTR CCA 90 bp | TCCTTCTTGCCCTCCATATATGGGCAGTGGCTCAGTGACTCAGTGCATTCTTCATGTAGTAGTCTTGCCTaGGTACTTTGCCATTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: SFLPSIYGQWLSDSVHSSCSSLA*VLCHFI Trigger: AATGAAATGGCAAAGTACCCAGGCAAGACTACTACA...TGAAGAATGCACTGAGTCACTGAGCCACTGCCCATATATGGAGGGCAAGAAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 |
||
| CDS-3UTR CCA 90 bp | AACTGTACCCTCAGGAAGACCATTTTTCCCTCTCTCCACAGTCCCCAGTTGTCTTGTAGTAGTCTTGCCTaGGTACTTTGCCATTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: NCTLRKTIFPSLHSPQLSCSSLA*VLCHFI Trigger: AATGAAATGGCAAAGTACCCAGGCAAGACTACTACA...AGACAACTGGGGACTGTGGAGAGAGGGAAAAATGGTCTTCCTGAGGGTACAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132513.8 |
||
| CDS-3UTR CCA 90 bp | TCTTGCCCTCCATATATGGGCAGTGGCTCAGTGACTCAGTGCATTCTTCACTTCGTTCTCATTGGCTGGTaGCTTGAAGGTAAATTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SCPPYMGSGSVTQCILHFVLIGW*LEGKFL Trigger: CAAAAATTTACCTTCAAGCCACCAGCCAATGAGAAC...GAAGTGAAGAATGCACTGAGTCACTGAGCCACTGCCCATATATGGAGGGCAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS-3UTR CCA 90 bp | ATTCCTTCCAACTTTCCCCGTCACCTTCCTTCTTGCCCTCCATATATGGGCAGTGTTCTCATTGGCTGGTaGCTTGAAGGTAAATTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: IPSNFPRHLPSCPPYMGSVLIGW*LEGKFL Trigger: CAAAAATTTACCTTCAAGCCACCAGCCAATGAGAAC...ACTGCCCATATATGGAGGGCAAGAAGGAAGGTGACGGGGAAAGTTGGAAGGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS-3UTR CCA 90 bp | CCTCCATATATGGGCAGTGGCTCAGTGACTCAGTGCATTCTTCACTTCTTTCTGCAGGTTCTCATTGGCTaGTGGCTTGAAGGTAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: PPYMGSGSVTQCILHFFLQVLIG*WLEGKF Trigger: AAATTTACCTTCAAGCCACCAGCCAATGAGAACCTG...CAGAAAGAAGTGAAGAATGCACTGAGTCACTGAGCCACTGCCCATATATGGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| 3UTR CAA 72 bp | TTCTCAGGTTACACGAAGAGTGAACAGTTGCTGGGATaGGGAATGGGGAAGAGACTCTTCAGTTGTACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FSGYTKSEQLLG*GMGKRLFSCTD Trigger: ATCTGTACAACTGAAGAGTCTCTTCCCCATTCCCAATCCCAGCAACTGTTCACTCTTCGTGTAACCTGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| CDS-3UTR TCA 90 bp | ATATATGGGCAGTGGCTCAGTGACTCAGTGCATTCTTCACTTCTTTCTGCTCTCGAGAAAAGGCTTCTTTaGTTAAAGGCAGGCTGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: IYGQWLSDSVHSSLLSALEKRLL*LKAGCL Trigger: TAAGCAGCCTGCCTTTAATCAAAGAAGCCTTTTCTC...GAGAGCAGAAAGAAGTGAAGAATGCACTGAGTCACTGAGCCACTGCCCATATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS-3UTR TCA 90 bp | TCCTTCTTGCCCTCCATATATGGGCAGTGGCTCAGTGACTCAGTGCATTCTTCAAAGTTTTCATCCAGGTaGGAAAAGGCTTCTTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: SFLPSIYGQWLSDSVHSSKFSSR*EKASLI Trigger: AATCAAAGAAGCCTTTTCTCACCTGGATGAAAACTT...TGAAGAATGCACTGAGTCACTGAGCCACTGCCCATATATGGAGGGCAAGAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS-3UTR GCA 90 bp | CCTCCATATATGGGCAGTGGCTCAGTGACTCAGTGCATTCTTCACTTCTTTCTGTCAGAGGGACACTATTaGCCATTCTCAGAATTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PPYMGSGSVTQCILHFFLSEGHY*PFSEFH Trigger: ATGAAATTCTGAGAATGGGCAATAGTGTCCCTCTGA...CAGAAAGAAGTGAAGAATGCACTGAGTCACTGAGCCACTGCCCATATATGGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS-3UTR CCA 90 bp | CCTCCATATATGGGCAGTGGCTCAGTGACTCAGTGCATTCTTCACTTCTTTCTGTGTAGTAGTCTTGCCTaGGTACTTTGCCATTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: PPYMGSGSVTQCILHFFLCSSLA*VLCHFI Trigger: AATGAAATGGCAAAGTACCCAGGCAAGACTACTACA...CAGAAAGAAGTGAAGAATGCACTGAGTCACTGAGCCACTGCCCATATATGGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 |
||
| CDS-3UTR CCA 90 bp | GAGCATGTAAGTGATTTATCCACAACCAATTTGGAGGTCTCAGCAGTCCAGAATAAGCTCGCTTTCCTTTaGCAAGTGAAATCCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EHVSDLSTTNLEVSAVQNKLAFL*QVKSSQ Trigger: CTGGCTGGATTTCACTTGCCAAAGGAAAGCGAGCTT...ATTCTGGACTGCTGAGACCTCCAAATTGGTTGTGGATAAATCACTTACATGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| 3UTR CAA 72 bp | AAGTGGACCTTAGGTGGAGCTGCTTTTGATTCCCAGTaGTTAACACTGAATTTTATCCCAGTTGGTTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KWTLGGAAFDSQ*LTLNFIPVGSC Trigger: GCAGGAACCAACTGGGATAAAATTCAGTGTTAACAACTGGGAATCAAAAGCAGCTCCACCTAAGGTCCACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| CDS-3UTR TCA 90 bp | TACAAGCACTTTTTACAAGGAGGAACCACAGTTCTCTTTGCAGTTGTAGATGAACAGTCAAATTGGTCATaGCCACAGACCGCTTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: YKHFLQGGTTVLFAVVDEQSNWS*PQTALA Trigger: TGCCAAAGCGGTCTGTGGTCATGACCAATTTGACTG...TTCATCTACAACTGCAAAGAGAACTGTGGTTCCTCCTTGTAAAAAGTGCTTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| CDS-3UTR GCA 90 bp | ATATATGGGCAGTGGCTCAGTGACTCAGTGCATTCTTCACTTCTTTCTGCTCTCTCAGAGGGACACTATTaGCCATTCTCAGAATTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: IYGQWLSDSVHSSLLSALSEGHY*PFSEFH Trigger: ATGAAATTCTGAGAATGGGCAATAGTGTCCCTCTGA...GAGAGCAGAAAGAAGTGAAGAATGCACTGAGTCACTGAGCCACTGCCCATATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS-3UTR CCA 90 bp | GAGCATGTAAGTGATTTATCCACAACCAATTTGGAGGTCTCAGCAGTCCAGAATTCCATGTCTGGCCACTaGAGAAGATCAATCCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: EHVSDLSTTNLEVSAVQNSMSGH*RRSIHF Trigger: GAAATGGATTGATCTTCTCCAGTGGCCAGACATGGA...ATTCTGGACTGCTGAGACCTCCAAATTGGTTGTGGATAAATCACTTACATGCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS-3UTR CCA 90 bp | TCCTTCTTGCCCTCCATATATGGGCAGTGGCTCAGTGACTCAGTGCATTCTTCAATGTTTTGTTATCCATaGGAAGATGTTGTAGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: SFLPSIYGQWLSDSVHSSMFCYP*EDVVEM Trigger: CATCTCTACAACATCTTCCCATGGATAACAAAACAT...TGAAGAATGCACTGAGTCACTGAGCCACTGCCCATATATGGAGGGCAAGAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 |
||
| CDS-3UTR CCA 90 bp | AATAAAATTCCTGGCTCACCAAGCTGGATTTTGTGTGGTCTATTGTGCCCTGTCCAGGTTCTCATTGGCTaGTGGCTTGAAGGTAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: NKIPGSPSWILCGLLCPVQVLIG*WLEGKF Trigger: AAATTTACCTTCAAGCCACCAGCCAATGAGAACCTG...GACAGGGCACAATAGACCACACAAAATCCAGCTTGGTGAGCCAGGAATTTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| 3UTR CAA 72 bp | ATCATAGCAATGATTACTATGGGAGAGAGATTAACGTaGCCTCAAGGAAGTGAGAAGGCTCACTGCTACATC | + |
|
Preference number: 4 (lower is better) Translates to: IIAMITMGERLT*PQGSEKAHCYI Trigger: GATGTAGCAGTGAGCCTTCTCACTTCCTTGAGGCAACGTTAATCTCTCTCCCATAGTAATCATTGCTATGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| CDS-3UTR TCA 90 bp | GGCAGACAGACTGAGGCTAGAAAAACCTTGTTTTGTGTTCTTATGGAGTCTGAAGAGAAAAGGCTTCTTTaGTTAAAGGCAGGCTGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: GRQTEARKTLFCVLMESEEKRLL*LKAGCL Trigger: TAAGCAGCCTGCCTTTAATCAAAGAAGCCTTTTCTC...TTCAGACTCCATAAGAACACAAAACAAGGTTTTTCTAGCCTCAGTCTGTCTGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| CDS-3UTR GCA 90 bp | CCTCCATATATGGGCAGTGGCTCAGTGACTCAGTGCATTCTTCACTTCTTTCTGAATGATATTGGAAACTaGACTGTAGATCTTGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PPYMGSGSVTQCILHFFLNDIGN*TVDLEV Trigger: CACTTCAAGATCTACAGTGCAGTTTCCAATATCATT...CAGAAAGAAGTGAAGAATGCACTGAGTCACTGAGCCACTGCCCATATATGGAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS-3UTR CCA 90 bp | GGGAAGAGACTCTTCAGTTGTACAGATGCTGCCTGTAAATTAAGCAGGGAACTTGTTCTCATTGGCTGGTaGCTTGAAGGTAAATTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GKRLFSCTDAACKLSRELVLIGW*LEGKFL Trigger: CAAAAATTTACCTTCAAGCCACCAGCCAATGAGAAC...AAGTTCCCTGCTTAATTTACAGGCAGCATCTGTACAACTGAAGAGTCTCTTCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| 3UTR CAA 72 bp | ATCATTGAGCATGTAAGTGATTTATCCACAACCAATTaGGAGGTCTCAGCAGTCCAGAATATAGGTCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: IIEHVSDLSTTN*EVSAVQNIGPL Trigger: CAGTGGACCTATATTCTGGACTGCTGAGACCTCCAAATTGGTTGTGGATAAATCACTTACATGCTCAATGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS-3UTR TCA 90 bp | TTTATCCACAACCAATTTGGAGGTCTCAGCAGTCCAGAATATAGGTCCACTGACAAGTTTTCATCCAGGTaGGAAAAGGCTTCTTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: FIHNQFGGLSSPEYRSTDKFSSR*EKASLI Trigger: AATCAAAGAAGCCTTTTCTCACCTGGATGAAAACTT...GTCAGTGGACCTATATTCTGGACTGCTGAGACCTCCAAATTGGTTGTGGATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS-3UTR GCA 90 bp | GGGAAGAGACTCTTCAGTTGTACAGATGCTGCCTGTAAATTAAGCAGGGAACTTAATGATATTGGAAACTaGACTGTAGATCTTGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GKRLFSCTDAACKLSRELNDIGN*TVDLEV Trigger: CACTTCAAGATCTACAGTGCAGTTTCCAATATCATT...AAGTTCCCTGCTTAATTTACAGGCAGCATCTGTACAACTGAAGAGTCTCTTCCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| CDS-3UTR GCA 90 bp | GAGCATGTAAGTGATTTATCCACAACCAATTTGGAGGTCTCAGCAGTCCAGAATAATGATATTGGAAACTaGACTGTAGATCTTGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: EHVSDLSTTNLEVSAVQNNDIGN*TVDLEV Trigger: CACTTCAAGATCTACAGTGCAGTTTCCAATATCATT...ATTCTGGACTGCTGAGACCTCCAAATTGGTTGTGGATAAATCACTTACATGCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS-3UTR CCA 90 bp | TACAAGCACTTTTTACAAGGAGGAACCACAGTTCTCTTTGCAGTTGTAGATGAAATGTTTTGTTATCCATaGGAAGATGTTGTAGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: YKHFLQGGTTVLFAVVDEMFCYP*EDVVEM Trigger: CATCTCTACAACATCTTCCCATGGATAACAAAACAT...TTCATCTACAACTGCAAAGAGAACTGTGGTTCCTCCTTGTAAAAAGTGCTTGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| CDS-3UTR TCA 90 bp | AGAAAAACCTTGTTTTGTGTTCTTATGGAGTCTGAAGATAGGAAGATTTCTCAGAAGTTTTCATCCAGGTaGGAAAAGGCTTCTTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: RKTLFCVLMESEDRKISQKFSSR*EKASLI Trigger: AATCAAAGAAGCCTTTTCTCACCTGGATGAAAACTT...CTGAGAAATCTTCCTATCTTCAGACTCCATAAGAACACAAAACAAGGTTTTTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| CDS CCA 90 bp | GTCCATCTGGAACGAGTTGCCCACAAAGGGCAAGCGCGGCGGCCTTaGCGGGTAGTTCTTGGGGCGCCGGCTTTTGAGGTAGTCAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VHLERVAHKGQARRP*RVVLGAPAFEVVSQ Trigger: CTGGCTGACTACCTCAAAAGCCGGCGCCCCAAGAACTACCCGCCAAGGCCGCCGCGCTTGCCCTTTGTGGGCAACTCGTTCCAGATGGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS CCA 90 bp | GCCAGAAAAAGGAAGGTGACAGCAGCTAGCAGCAGAGTCCGGAGATaGAGAGCTGCCCAGAAGGCAGCTGCCAGGGAGTCCGCGGCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: ARKRKVTAASSRVRR*RAAQKAAARESAAS Trigger: CGAAGCCGCGGACTCCCTGGCAGCTGCCTTCTGGGCAGCTCTCCATCTCCGGACTCTGCTGCTAGCTGCTGTCACCTTCCTTTTTCTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS GCA 90 bp | TCTGAACTGCCAGATGCGACTGCGTCAAGTCCATCTGGAACGAGTTaGCCACAAAGGGCAAGCGCGGCGGCCTTGGCGGGTAGTTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SELPDATASSPSGTS*PQRASAAALAGSSW Trigger: CCAAGAACTACCCGCCAAGGCCGCCGCGCTTGCCCTTTGTGGGCAACTCGTTCCAGATGGACTTGACGCAGTCGCATCTGGCAGTTCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS-3UTR CAA 90 bp | CAATTCCCGCCAACTCTACGCCCATCTGTCAGAACCCCTGACTCCCACGGATTGGGTAGCCAACAATGTTaGGTGTTGTCCTGGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: QFPPTLRPSVRTPDSHGLGSQQC*VLSWEM Trigger: CATCTCCCAGGACAACACCAAACATTGTTGGCTACC...CAATCCGTGGGAGTCAGGGGTTCTGACAGATGGGCGTAGAGTTGGCGGGAATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| CDS-3UTR CAA 90 bp | CCAACTTTCCCCGTCACCTTCCTTCTTGCCCTCCATATATGGGCAGTGGCTCAGCAAGCTCGCTTTCCTTaGGCAAGTGAAATCCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PTFPVTFLLALHIWAVAQQARFP*ASEIQP Trigger: TGGCTGGATTTCACTTGCCAAAGGAAAGCGAGCTTG...CTGAGCCACTGCCCATATATGGAGGGCAAGAAGGAAGGTGACGGGGAAAGTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS-3UTR CAA 90 bp | AGGTCCACTGACCTTAGTCTAATTCCTTCCAACTTTCCCCGTCACCTTCCTTCTCAGGGCAAACCTCCTTaGTTCCTTCCATGTCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RSTDLSLIPSNFPRHLPSQGKPP*FLPCLA Trigger: GGCCAGACATGGAAGGAACAAAGGAGGTTTGCCCTG...AGAAGGAAGGTGACGGGGAAAGTTGGAAGGAATTAGACTAAGGTCAGTGGACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS-3UTR CAA 90 bp | GTTGCTGGGATTGGGAATGGGGAAGAGACTCTTCAGTTGTACAGATGCTGCCTGAGACTCAGGTTCTCATaGGCTGGTGGCTTGAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: VAGIGNGEETLQLYRCCLRLRFS*AGGLKV Trigger: TACCTTCAAGCCACCAGCCAATGAGAACCTGAGTCT...CAGGCAGCATCTGTACAACTGAAGAGTCTCTTCCCCATTCCCAATCCCAGCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| CDS TCA 90 bp | TGCAGTGCAGTCAAATTGGTCATGACCACAGACCGCTTTGGCAAGTaGAATCCAGCCAGTGTAGTGTCAACTGCCACTTCCCTGGGAATA | + |
|
Preference number: 5 (lower is better) Translates to: CSAVKLVMTTDRFGK*NPASVVSTATSLGI Trigger: TATTCCCAGGGAAGTGGCAGTTGACACTACACTGGCTGGATTTCACTTGCCAAAGCGGTCTGTGGTCATGACCAATTTGACTGCACTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| CDS GCA 90 bp | CACAGACCGCTTTGGCAAGTGAAATCCAGCCAGTGTAGTGTCAACTaGCACTTCCCTGGGAATATTCAGAGGGACACTATTGCCCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: HRPLWQVKSSQCSVN*HFPGNIQRDTIAHS Trigger: AGAATGGGCAATAGTGTCCCTCTGAATATTCCCAGGGAAGTGGCAGTTGACACTACACTGGCTGGATTTCACTTGCCAAAGCGGTCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| CDS GCA 90 bp | TCTGGATTGAAGATGTCTGGGGTGGCCCATTCTTTAGGGTCCATATaGAGTGCAGTCAAATTGGTCATGACCACAGACCGCTTTGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SGLKMSGVAHSLGSI*SAVKLVMTTDRFGK Trigger: CTTGCCAAAGCGGTCTGTGGTCATGACCAATTTGACTGCACTGCATATGGACCCTAAAGAATGGGCCACCCCAGACATCTTCAATCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| CDS CCA 90 bp | GTCCATATGCAGTGCAGTCAAATTGGTCATGACCACAGACCGCTTTaGCAAGTGAAATCCAGCCAGTGTAGTGTCAACTGCCACTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: VHMQCSQIGHDHRPL*QVKSSQCSVNCHFP Trigger: AGGGAAGTGGCAGTTGACACTACACTGGCTGGATTTCACTTGCCAAAGCGGTCTGTGGTCATGACCAATTTGACTGCACTGCATATGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| CDS-3UTR CAA 90 bp | ATATATGGGCAGTGGCTCAGTGACTCAGTGCATTCTTCACTTCTTTCTGCTCTCCAGGGCAAACCTCCTTaGTTCCTTCCATGTCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: IYGQWLSDSVHSSLLSALQGKPP*FLPCLA Trigger: GGCCAGACATGGAAGGAACAAAGGAGGTTTGCCCTG...GAGAGCAGAAAGAAGTGAAGAATGCACTGAGTCACTGAGCCACTGCCCATATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
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| CDS GCA 90 bp | CTCGCTTTCCTTTGGCAAGTGAAATCCAGCCAGTGTAGTGTCAACTaGCACTTCCCTGGGAATATTCAGAGGGACACTATTGCCCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: LAFLWQVKSSQCSVN*HFPGNIQRDTIAHS Trigger: AGAATGGGCAATAGTGTCCCTCTGAATATTCCCAGGGAAGTGGCAGTTGACACTACACTGGCTGGATTTCACTTGCCAAAGGAAAGCGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097973.3 ENSMUST00000107078.9 |
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| CDS-3UTR CAA 90 bp | TTTATCCACAACCAATTTGGAGGTCTCAGCAGTCCAGAATATAGGTCCACTGACCAGGGCAAACCTCCTTaGTTCCTTCCATGTCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FIHNQFGGLSSPEYRSTDQGKPP*FLPCLA Trigger: GGCCAGACATGGAAGGAACAAAGGAGGTTTGCCCTG...GTCAGTGGACCTATATTCTGGACTGCTGAGACCTCCAAATTGGTTGTGGATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS-3UTR CAA 90 bp | TTTTCTTCTCCAGCATCATTGTCTAGGGACAGCACCGATGCGGTAGCTGACTGGGTCCTGGGAGATGTTTaGTTATCCATGGGAAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: FSSPASLSRDSTDAVADWVLGDV*LSMGRC Trigger: ACATCTTCCCATGGATAACAAAACATCTCCCAGGAC...CCAGTCAGCTACCGCATCGGTGCTGTCCCTAGACAATGATGCTGGAGAAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097973.3 |
||
| CDS-3UTR CAA 90 bp | TCTTGCCCTCCATATATGGGCAGTGGCTCAGTGACTCAGTGCATTCTTCACTTCGTAGTGTTGAGGATGTaGTCTCTGTTCCAGCAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SCPPYMGSGSVTQCILHFVVLRM*SLFQQG Trigger: TCCTTGCTGGAACAGAGACAACATCCTCAACACTAC...GAAGTGAAGAATGCACTGAGTCACTGAGCCACTGCCCATATATGGAGGGCAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
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| CDS GCA 90 bp | ATTGAAGATGTCTGGGGTGGCCCATTCTTTAGGGTCCATATGCAGTaGAGTCAAATTGGTCATGACCACAGACCGCTTTGGCAAGTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: IEDVWGGPFFRVHMQ*SQIGHDHRPLWQVK Trigger: TTTCACTTGCCAAAGCGGTCTGTGGTCATGACCAATTTGACTGCACTGCATATGGACCCTAAAGAATGGGCCACCCCAGACATCTTCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| CDS GCA 90 bp | TCAAACTGCCTTTGGCAAGTGAAATCCAGCCAGTGTAGTGTCAACTaGCACTTCCCTGGGAATATTCAGAGGGACACTATTGCCCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: SNCLWQVKSSQCSVN*HFPGNIQRDTIAHS Trigger: AGAATGGGCAATAGTGTCCCTCTGAATATTCCCAGGGAAGTGGCAGTTGACACTACACTGGCTGGATTTCACTTGCCAAAGGCAGTTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132513.8 |
||
| CDS-3UTR CAA 90 bp | ATATATGGGCAGTGGCTCAGTGACTCAGTGCATTCTTCACTTCTTTCTGCTCTCGGTAGCCAACAATGTTaGGTGTTGTCCTGGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: IYGQWLSDSVHSSLLSALGSQQC*VLSWEM Trigger: CATCTCCCAGGACAACACCAAACATTGTTGGCTACC...GAGAGCAGAAAGAAGTGAAGAATGCACTGAGTCACTGAGCCACTGCCCATATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 |
||
| CDS-3UTR CAA 90 bp | CCTCCATATATGGGCAGTGGCTCAGTGACTCAGTGCATTCTTCACTTCTTTCTGGTAGTGTTGAGGATGTaGTCTCTGTTCCAGCAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PPYMGSGSVTQCILHFFLVVLRM*SLFQQG Trigger: TCCTTGCTGGAACAGAGACAACATCCTCAACACTAC...CAGAAAGAAGTGAAGAATGCACTGAGTCACTGAGCCACTGCCCATATATGGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS-3UTR CAA 90 bp | AGGTCCACTGACCTTAGTCTAATTCCTTCCAACTTTCCCCGTCACCTTCCTTCTGTCCTGGGAGATGTTTaGTTATCCATGGGAAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: RSTDLSLIPSNFPRHLPSVLGDV*LSMGRC Trigger: ACATCTTCCCATGGATAACAAAACATCTCCCAGGAC...AGAAGGAAGGTGACGGGGAAAGTTGGAAGGAATTAGACTAAGGTCAGTGGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 |
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| CDS GCA 90 bp | CTCAAACCGTTCCCCAAAGGTGATGGAGCAAATGATATTGGAAACTaGACTGTAGATCTTGAAGTGAGGATCAAAAGGCTGTCCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LKPFPKGDGANDIGN*TVDLEVRIKRLSFL Trigger: GAGGAAGGACAGCCTTTTGATCCTCACTTCAAGATCTACAGTGCAGTTTCCAATATCATTTGCTCCATCACCTTTGGGGAACGGTTTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS-3UTR CAA 90 bp | AGAAGCATGCTTTTTGCACAAGTAAATTTTGGTCTCATCTTGGGCACGAACCCCGTAGTGTTGAGGATGTaGTCTCTGTTCCAGCAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RSMLFAQVNFGLILGTNPVVLRM*SLFQQG Trigger: TCCTTGCTGGAACAGAGACAACATCCTCAACACTAC...GGGGTTCGTGCCCAAGATGAGACCAAAATTTACTTGTGCAAAAAGCATGCTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
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| CDS-3UTR CAA 90 bp | TCCTTCTTGCCCTCCATATATGGGCAGTGGCTCAGTGACTCAGTGCATTCTTCACTTGAAGGTAAATTTTaGCACAAGGGCAGTGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SFLPSIYGQWLSDSVHSSLEGKF*HKGSEE Trigger: TTCTTCACTGCCCTTGTGCAAAAATTTACCTTCAAG...TGAAGAATGCACTGAGTCACTGAGCCACTGCCCATATATGGAGGGCAAGAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS-3UTR CAA 90 bp | GAGCATGTAAGTGATTTATCCACAACCAATTTGGAGGTCTCAGCAGTCCAGAATCAAGCTCGCTTTCCTTaGGCAAGTGAAATCCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: EHVSDLSTTNLEVSAVQNQARFP*ASEIQP Trigger: TGGCTGGATTTCACTTGCCAAAGGAAAGCGAGCTTG...ATTCTGGACTGCTGAGACCTCCAAATTGGTTGTGGATAAATCACTTACATGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS GCA 90 bp | TTCAGACTCAGGTTCTCATTGGCTGGTGGCTTGAAGGTAAATTTTTaGACAAGGGCAGTGAAGAAAATAAAGAGCTCAGACCTGGCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: FRLRFSLAGGLKVNF*TRAVKKIKSSDLAN Trigger: ATTGGCCAGGTCTGAGCTCTTTATTTTCTTCACTGCCCTTGTGCAAAAATTTACCTTCAAGCCACCAGCCAATGAGAACCTGAGTCTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| CDS CCA 90 bp | CTTAAACTGTCCATTCTCCAAAAAGTGCTCTGGATTGAAGATGTCTaGGGTGGCCCATTCTTTAGGGTCCATATGCAGTGCAGTCAAATT | + |
|
Preference number: 5 (lower is better) Translates to: LKLSILQKVLWIEDV*GGPFFRVHMQCSQI Trigger: AATTTGACTGCACTGCATATGGACCCTAAAGAATGGGCCACCCCAGACATCTTCAATCCAGAGCACTTTTTGGAGAATGGACAGTTTAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
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| CDS-3UTR CAA 90 bp | TACAAGCACTTTTTACAAGGAGGAACCACAGTTCTCTTTGCAGTTGTAGATGAATGCAGTGCAGTCAAATaGGTCATGACCACAGACCGC | + |
|
Preference number: 5 (lower is better) Translates to: YKHFLQGGTTVLFAVVDECSAVK*VMTTDR Trigger: GCGGTCTGTGGTCATGACCAATTTGACTGCACTGCA...TTCATCTACAACTGCAAAGAGAACTGTGGTTCCTCCTTGTAAAAAGTGCTTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| CDS-3UTR CAA 90 bp | TTCTTGCCCTCCATATATGGGCAGTGGCTCAGTGACTCAGTGCATTCTTCACTTCTTGAAGGTAAATTTTaGCACAAGGGCAGTGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: FLPSIYGQWLSDSVHSSLLEGKF*HKGSEE Trigger: TTCTTCACTGCCCTTGTGCAAAAATTTACCTTCAAG...AAGTGAAGAATGCACTGAGTCACTGAGCCACTGCCCATATATGGAGGGCAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
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| CDS-3UTR CAA 90 bp | ATATATGGGCAGTGGCTCAGTGACTCAGTGCATTCTTCACTTCTTTCTGCTCTCCTTGAAGGTAAATTTTaGCACAAGGGCAGTGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: IYGQWLSDSVHSSLLSALLEGKF*HKGSEE Trigger: TTCTTCACTGCCCTTGTGCAAAAATTTACCTTCAAG...GAGAGCAGAAAGAAGTGAAGAATGCACTGAGTCACTGAGCCACTGCCCATATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
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| CDS-3UTR CAA 90 bp | GCCAGGAAAATGACTGCATATCACAACCTTCCAGACAGAGTTGATTATCAGACTAAGCTCGCTTTCCCATaGAAAATGGCAGAAAAGATT | + |
|
Preference number: 5 (lower is better) Translates to: ARKMTAYHNLPDRVDYQTKLAFP*KMAEKI Trigger: AATCTTTTCTGCCATTTTCAATGGGAAAGCGAGCTT...AGTCTGATAATCAACTCTGTCTGGAAGGTTGTGATATGCAGTCATTTTCCTGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
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| CDS TCA 90 bp | AGGGTTCCAGTCTTTGCGGTGATTGTCAATTATATCAGCAATATATaGTTTCAGTTTTCTCCAGGTAGCCAACAATGTTTGGTGTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RVPVFAVIVNYISNI*FQFSPGSQQCLVLS Trigger: GGACAACACCAAACATTGTTGGCTACCTGGAGAAAACTGAAATCATATATTGCTGATATAATTGACAATCACCGCAAAGACTGGAACCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 |
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| CDS-3UTR CAA 90 bp | AGATTTCTCCATTTCATGTTCTTTTTGTCCGTTTCCTTTTCTTCAGGTCTTGTTGTAGTGTTGAGGATGTaGTCTCTGTTCCAGCAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RFLHFMFFLSVSFSSGLVVVLRM*SLFQQG Trigger: TCCTTGCTGGAACAGAGACAACATCCTCAACACTAC...AACAAGACCTGAAGAAAAGGAAACGGACAAAAAGAACATGAAATGGAGAAATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132513.8 |
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| CDS GCA 90 bp | AAGGTTTTCTTCATTGAAACTTGTAGTAGTCTTGCCTGGGTACTTTaGCATTTCATTGAGAAAAGCATCAATGAAGTCTCTTGGCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: KVFFIETCSSLAWVL*HFIEKSINEVSWLI Trigger: GATGAGCCAAGAGACTTCATTGATGCTTTTCTCAATGAAATGGCAAAGTACCCAGGCAAGACTACTACAAGTTTCAATGAAGAAAACCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000132513.8 |
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| CDS GCA 72 bp | CCAGATGCGACTGCGTCAAGTCCATCTGGAACGAGTTaGCCACAAAGGGCAAGCGCGGCGGCCTTGGCGGGT | + |
|
Preference number: 6 (lower is better) Translates to: PDATASSPSGTS*PQRASAAALAG Trigger: ACCCGCCAAGGCCGCCGCGCTTGCCCTTTGTGGGCAACTCGTTCCAGATGGACTTGACGCAGTCGCATCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
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| CDS CCA 72 bp | GAACGAGTTGCCCACAAAGGGCAAGCGCGGCGGCCTTaGCGGGTAGTTCTTGGGGCGCCGGCTTTTGAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: ERVAHKGQARRP*RVVLGAPAFEV Trigger: TACCTCAAAAGCCGGCGCCCCAAGAACTACCCGCCAAGGCCGCCGCGCTTGCCCTTTGTGGGCAACTCGTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
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| CDS CAA 72 bp | CCATGTAGAGCAGAGCCCATCGTAGTGTTGAGGATGTaGTCTCTGTTCCAGCAAGGAAGAGGTCCAGAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: PCRAEPIVVLRM*SLFQQGRGPEC Trigger: GCACTCTGGACCTCTTCCTTGCTGGAACAGAGACAACATCCTCAACACTACGATGGGCTCTGCTCTACATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 ENSMUST00000132513.8 |
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| CDS TCA 72 bp | TTGTTCTCCGAGGCAAGCTCGCTTTCCTTTGGCAAGTaGAATCCAGCCAGTGTAGTGTCAACTGCCACTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LFSEASSLSFGK*NPASVVSTATS Trigger: GGAAGTGGCAGTTGACACTACACTGGCTGGATTTCACTTGCCAAAGGAAAGCGAGCTTGCCTCGGAGAACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS GCA 72 bp | AAGATGTCTGGGGTGGCCCATTCTTTAGGGTCCATATaGAGTGCAGTCAAATTGGTCATGACCACAGACCGC | + |
|
Preference number: 6 (lower is better) Translates to: KMSGVAHSLGSI*SAVKLVMTTDR Trigger: GCGGTCTGTGGTCATGACCAATTTGACTGCACTGCATATGGACCCTAAAGAATGGGCCACCCCAGACATCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| CDS CCA 72 bp | ATGGAGTCTCTGTCAGCCAGGCTGGGATGCTTCGACTaGCCAATCACTCGGTCAATTTCAGCCTGTACATTT | + |
|
Preference number: 6 (lower is better) Translates to: MESLSARLGCFD*PITRSISACTF Trigger: AAATGTACAGGCTGAAATTGACCGAGTGATTGGCCAGTCGAAGCATCCCAGCCTGGCTGACAGAGACTCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 ENSMUST00000132513.8 |
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| CDS CCA 72 bp | CAGTGCAGTCAAATTGGTCATGACCACAGACCGCTTTaGCAAGTGAAATCCAGCCAGTGTAGTGTCAACTGC | + |
|
Preference number: 6 (lower is better) Translates to: QCSQIGHDHRPL*QVKSSQCSVNC Trigger: GCAGTTGACACTACACTGGCTGGATTTCACTTGCCAAAGCGGTCTGTGGTCATGACCAATTTGACTGCACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| CDS CAA 90 bp | CTTTCCCAGTCCAAAGTTCCTCAGTGTCATCAGGGCAAACCTCCTTaGTTCCTTCCATGTCTGGCCACTGGAGAAGATCAATCCATTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LSQSKVPQCHQGKPP*FLPCLATGEDQSIS Trigger: GGAAATGGATTGATCTTCTCCAGTGGCCAGACATGGAAGGAACAAAGGAGGTTTGCCCTGATGACACTGAGGAACTTTGGACTGGGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS CCA 72 bp | AGAGATGGACCATTAGGGAGGTGGTACCCAAGTACATaGCTTTATCCAGTAACTGCAGCAGCTCCTGAAACT | + |
|
Preference number: 6 (lower is better) Translates to: RDGPLGRWYPST*LYPVTAAAPET Trigger: AGTTTCAGGAGCTGCTGCAGTTACTGGATAAAGCCATGTACTTGGGTACCACCTCCCTAATGGTCCATCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 |
||
| CDS CCA 72 bp | TCCATTCTCCAAAAAGTGCTCTGGATTGAAGATGTCTaGGGTGGCCCATTCTTTAGGGTCCATATGCAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SILQKVLWIEDV*GGPFFRVHMQC Trigger: GCACTGCATATGGACCCTAAAGAATGGGCCACCCCAGACATCTTCAATCCAGAGCACTTTTTGGAGAATGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| CDS CCA 72 bp | GGTAATGGACCATTAGGGAGGTGGTACCCAAGTACATaGCTTTATCCAGTAACTGCAGCAGCTCCTGAAACT | + |
|
Preference number: 6 (lower is better) Translates to: GNGPLGRWYPST*LYPVTAAAPET Trigger: AGTTTCAGGAGCTGCTGCAGTTACTGGATAAAGCCATGTACTTGGGTACCACCTCCCTAATGGTCCATTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107078.9 |
||
| CDS GCA 72 bp | CTTTGGCAAGTGAAATCCAGCCAGTGTAGTGTCAACTaGCACTTCCCTGGGAATATTCAGAGGGACACTATT | + |
|
Preference number: 6 (lower is better) Translates to: LWQVKSSQCSVN*HFPGNIQRDTI Trigger: AATAGTGTCCCTCTGAATATTCCCAGGGAAGTGGCAGTTGACACTACACTGGCTGGATTTCACTTGCCAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 ENSMUST00000132513.8 |
||
| CDS CAA 90 bp | CTTCAGACTCAGGTTCTCATTGGCTGGTGGCTTGAAGGTAAATTTTaGCACAAGGGCAGTGAAGAAAATAAAGAGCTCAGACCTGGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: LQTQVLIGWWLEGKF*HKGSEENKELRPGQ Trigger: TTGGCCAGGTCTGAGCTCTTTATTTTCTTCACTGCCCTTGTGCAAAAATTTACCTTCAAGCCACCAGCCAATGAGAACCTGAGTCTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| CDS TCA 72 bp | AGACTGATAACATTCCCATACTTCTTCACAAACTTCTaGACTGCCAGATGCGACTGCGTCAAGTCCATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RLITFPYFFTNF*TARCDCVKSIW Trigger: CCAGATGGACTTGACGCAGTCGCATCTGGCAGTTCAGAAGTTTGTGAAGAAGTATGGGAATGTTATCAGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS GCA 72 bp | GATAACATTCCCATACTTCTTCACAAACTTCTGAACTaGCAGATGCGACTGCGTCAAGTCCATCTGGAACGA | + |
|
Preference number: 6 (lower is better) Translates to: DNIPILLHKLLN*QMRLRQVHLER Trigger: TCGTTCCAGATGGACTTGACGCAGTCGCATCTGGCAGTTCAGAAGTTTGTGAAGAAGTATGGGAATGTTATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
||
| CDS CAA 72 bp | TTCTTAAACTGTCCATTCTCCAAAAAGTGCTCTGGATaGAAGATGTCTGGGGTGGCCCATTCTTTAGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: FLNCPFSKKCSG*KMSGVAHSLGS Trigger: GGACCCTAAAGAATGGGCCACCCCAGACATCTTCAATCCAGAGCACTTTTTGGAGAATGGACAGTTTAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030305.13 |
||
| CDS CAA 90 bp | CCAGCAAGGAAGAGGTCCAGAGTGCTGCAGATAAGGTTTTCTTCATaGAAACTTGTAGTAGTCTTGCCTGGGTACTTTGCCATTTCATTG | + |
|
Preference number: 6 (lower is better) Translates to: PARKRSRVLQIRFSS*KLVVVLPGYFAISL Trigger: CAATGAAATGGCAAAGTACCCAGGCAAGACTACTACAAGTTTCAATGAAGAAAACCTTATCTGCAGCACTCTGGACCTCTTCCTTGCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000132513.8 |
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| CDS CCA 72 bp | TGCCATTTCATTGAGAAAAGCATCAATGAAGTCTCTTaGCTCATCAGGGTTCCAGTCTTTGCGGTGATTGTC | + |
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Preference number: 6 (lower is better) Translates to: CHFIEKSINEVS*LIRVPVFAVIV Trigger: GACAATCACCGCAAAGACTGGAACCCTGATGAGCCAAGAGACTTCATTGATGCTTTTCTCAATGAAATGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000132513.8 |
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| CDS CAA 72 bp | AAGAGGTCCAGAGTGCTGCAGATAAGGTTTTCTTCATaGAAACTTGTAGTAGTCTTGCCTGGGTACTTTGCC | + |
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Preference number: 6 (lower is better) Translates to: KRSRVLQIRFSS*KLVVVLPGYFA Trigger: GGCAAAGTACCCAGGCAAGACTACTACAAGTTTCAATGAAGAAAACCTTATCTGCAGCACTCTGGACCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000132513.8 |
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| CDS GCA 72 bp | TTCCCCAAAGGTGATGGAGCAAATGATATTGGAAACTaGACTGTAGATCTTGAAGTGAGGATCAAAAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: FPKGDGANDIGN*TVDLEVRIKRL Trigger: CAGCCTTTTGATCCTCACTTCAAGATCTACAGTGCAGTTTCCAATATCATTTGCTCCATCACCTTTGGGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
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| CDS GCA 72 bp | AGGTTCTCATTGGCTGGTGGCTTGAAGGTAAATTTTTaGACAAGGGCAGTGAAGAAAATAAAGAGCTCAGAC | + |
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Preference number: 6 (lower is better) Translates to: RFSLAGGLKVNF*TRAVKKIKSSD Trigger: GTCTGAGCTCTTTATTTTCTTCACTGCCCTTGTGCAAAAATTTACCTTCAAGCCACCAGCCAATGAGAACCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
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| CDS CAA 72 bp | CAGGTTCTCATTGGCTGGTGGCTTGAAGGTAAATTTTaGCACAAGGGCAGTGAAGAAAATAAAGAGCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: QVLIGWWLEGKF*HKGSEENKELR Trigger: TCTGAGCTCTTTATTTTCTTCACTGCCCTTGTGCAAAAATTTACCTTCAAGCCACCAGCCAATGAGAACCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
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| CDS CCA 72 bp | TATGATTTCAGTTTTCTCCAGGTAGCCAACAATGTTTaGTGTTGTCCTGGGAGATGTTTTGTTATCCATGGG | + |
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Preference number: 6 (lower is better) Translates to: YDFSFLQVANNV*CCPGRCFVIHG Trigger: CCCATGGATAACAAAACATCTCCCAGGACAACACCAAACATTGTTGGCTACCTGGAGAAAACTGAAATCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 |
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| CDS CAA 72 bp | TTTCAGTTTTCTCCAGGTAGCCAACAATGTTTGGTGTaGTCCTGGGAGATGTTTTGTTATCCATGGGAAGAT | + |
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Preference number: 6 (lower is better) Translates to: FQFSPGSQQCLV*SWEMFCYPWED Trigger: ATCTTCCCATGGATAACAAAACATCTCCCAGGACAACACCAAACATTGTTGGCTACCTGGAGAAAACTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 |
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| CDS CAA 90 bp | AAGGCTTCTTTGATTAAAGGCAGGCTGCTTATAATGACTGCAGACTaGATTCCGAAATCAAGACTGATAACATTCCCATACTTCTTCACA | + |
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Preference number: 6 (lower is better) Translates to: KASLIKGRLLIMTAD*IPKSRLITFPYFFT Trigger: TGTGAAGAAGTATGGGAATGTTATCAGTCTTGATTTCGGAATCAAGTCTGCAGTCATTATAAGCAGCCTGCCTTTAATCAAAGAAGCCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
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| CDS CAA 90 bp | AGAGTGCTGCAGATAAGGTTTTCTTCATTGAAACTTGTAGTAGTCTaGCCTGGGTACTTTGCCATTTCATTGAGAAAAGCATCAATGAAG | + |
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Preference number: 6 (lower is better) Translates to: RVLQIRFSSLKLVVV*PGYFAISLRKASMK Trigger: CTTCATTGATGCTTTTCTCAATGAAATGGCAAAGTACCCAGGCAAGACTACTACAAGTTTCAATGAAGAAAACCTTATCTGCAGCACTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000132513.8 |
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| CDS TCA 72 bp | AAGTCTCTTGGCTCATCAGGGTTCCAGTCTTTGCGGTaGTTGTCAATTATATCAGCAATATATGATTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: KSLGSSGFQSLR*LSIISAIYDFS Trigger: ACTGAAATCATATATTGCTGATATAATTGACAATCACCGCAAAGACTGGAACCCTGATGAGCCAAGAGACTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000132513.8 |
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| CDS CAA 72 bp | TTGATTAAAGGCAGGCTGCTTATAATGACTGCAGACTaGATTCCGAAATCAAGACTGATAACATTCCCATAC | + |
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Preference number: 6 (lower is better) Translates to: LIKGRLLIMTAD*IPKSRLITFPY Trigger: GTATGGGAATGTTATCAGTCTTGATTTCGGAATCAAGTCTGCAGTCATTATAAGCAGCCTGCCTTTAATCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000107078.9 |
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| CDS GCA 72 bp | TTCATTGAAACTTGTAGTAGTCTTGCCTGGGTACTTTaGCATTTCATTGAGAAAAGCATCAATGAAGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: FIETCSSLAWVL*HFIEKSINEVS Trigger: AGAGACTTCATTGATGCTTTTCTCAATGAAATGGCAAAGTACCCAGGCAAGACTACTACAAGTTTCAATGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000132513.8 |
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| CDS CAA 72 bp | CAGATAAGGTTTTCTTCATTGAAACTTGTAGTAGTCTaGCCTGGGTACTTTGCCATTTCATTGAGAAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: QIRFSSLKLVVV*PGYFAISLRKA Trigger: TGCTTTTCTCAATGAAATGGCAAAGTACCCAGGCAAGACTACTACAAGTTTCAATGAAGAAAACCTTATCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000132513.8 |
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| CDS TCA 72 bp | GTCTTTGCGGTGATTGTCAATTATATCAGCAATATATaGTTTCAGTTTTCTCCAGGTAGCCAACAATGTTTG | + |
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Preference number: 6 (lower is better) Translates to: VFAVIVNYISNI*FQFSPGSQQCL Trigger: CAAACATTGTTGGCTACCTGGAGAAAACTGAAATCATATATTGCTGATATAATTGACAATCACCGCAAAGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030305.13 ENSMUST00000097973.3 ENSMUST00000132513.8 |
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