RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CYP2J12 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000081225

Ensembl transcript IDs: ENSMUST00000097972.5, ENSMUST00000121694.3

Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GATGACAGCATTGGTGTAGGGCATGGAGTCTCGGTCATCTGTGCTTaGCTGTCTTCCATGTCCAATTACCCTGTCAATCTCAGAGTGTAC +
Preference number: 1 (lower is better)
Translates to: DDSIGVGHGVSVICA*LSSMSNYPVNLRVY
Trigger: GTACACTCTGAGATTGACAGGGTAATTGGACATGGAAGACAGCCAAGCACAGATGACCGAGACTCCATGCCCTACACCAATGCTGTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR GCA 90 bp TCTCCTATGGCCTCCACAAGACAGTCAGCCTCCTTCTGTATGCGCTaGTCCAAGCTCTTTTTCCCTAATCCAAAGTTCTTGAGTGTCATC +
Preference number: 1 (lower is better)
Translates to: SPMASTRQSASFCMR*SKLFFPNPKFLSVI
Trigger: GATGACACTCAAGAACTTTGGATTAGGGAAAAAGAGCTTGGAGCAGCGCATACAGAAGGAGGCTGACTGTCTTGTGGAGGCCATAGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR CCA 90 bp TCTTCAGCATCAATGTCTAGGGACGGCACAGATGCAGTGGCTGACTaGAGAAAGTGTGAGGCCATTTCTGAACTTCAAGCTCAACTTCTC +
Preference number: 1 (lower is better)
Translates to: SSASMSRDGTDAVAD*RKCEAISELQAQLL
Trigger: GAGAAGTTGAGCTTGAAGTTCAGAAATGGCCTCACACTTTCTCCAGTCAGCCACTGCATCTGTGCCGTCCCTAGACATTGATGCTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR CCA 90 bp TCATTGCTTCTTCAGCATCAATGTCTAGGGACGGCACAGATGCAGTaGCTGACTGGAGAAAGTGTGAGGCCATTTCTGAACTTCAAGCTC +
Preference number: 1 (lower is better)
Translates to: SLLLQHQCLGTAQMQ*LTGESVRPFLNFKL
Trigger: GAGCTTGAAGTTCAGAAATGGCCTCACACTTTCTCCAGTCAGCCACTGCATCTGTGCCGTCCCTAGACATTGATGCTGAAGAAGCAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR TCA 90 bp TCTGTATGCGCTGCTCCAAGCTCTTTTTCCCTAATCCAAAGTTCTTaGGTGTCATCAGTGCGAACCTTCTTTGCTCCTTCCATGTCTGGC +
Preference number: 1 (lower is better)
Translates to: SVCAAPSSFSLIQSS*VSSVRTFFAPSMSG
Trigger: GCCAGACATGGAAGGAGCAAAGAAGGTTCGCACTGATGACACTCAAGAACTTTGGATTAGGGAAAAAGAGCTTGGAGCAGCGCATACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR CCA 90 bp GAAAGACATTGTAGAGTTGGCACATCATTGATGCCTCCAAACACGTaGCTTCATCTAATAACCTCAGCAACTCATGAAAGTGACTGTCCT +
Preference number: 1 (lower is better)
Translates to: ERHCRVGTSLMPPNT*LHLITSATHESDCP
Trigger: AGGACAGTCACTTTCATGAGTTGCTGAGGTTATTAGATGAAGCCACGTGTTTGGAGGCATCAATGATGTGCCAACTCTACAATGTCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR CCA 90 bp AGTTTCTCAAAACTGTTTGATGTGATCCAGGAACATATTGAATTATaGATGGAAAGACATTGTAGAGTTGGCACATCATTGATGCCTCCA +
Preference number: 1 (lower is better)
Translates to: SFSKLFDVIQEHIEL*MERHCRVGTSLMPP
Trigger: TGGAGGCATCAATGATGTGCCAACTCTACAATGTCTTTCCATCCATAATTCAATATGTTCCTGGATCACATCAAACAGTTTTGAGAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR-3UTR TCA 90 bp TACTTCCCTGGGAACATTCATGGGGAGGATGTTGCCCATCCTCAGCACCTCATGGAGTTGGCACATCATTaGTGCCTCCAAACACGTGGC +
Preference number: 2 (lower is better)
Translates to: YFPGNIHGEDVAHPQHLMELAHH*CLQTRG
Trigger: GCCACGTGTTTGGAGGCATCAATGATGTGCCAACTC...CATGAGGTGCTGAGGATGGGCAACATCCTCCCCATGAATGTTCCCAGGGAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR-3UTR CCA 90 bp GTGAAGAAAATGAACAGCTCAGATCTGGCCAGTTGTTCTCCAGGGCAAGCTCTCGAGTGGCCCACTCTTTaGGGTCCCTGTGAAGAGCTG +
Preference number: 2 (lower is better)
Translates to: VKKMNSSDLASCSPGQALEWPTL*GPCEEL
Trigger: CAGCTCTTCACAGGGACCCCAAAGAGTGGGCCACTC...GAGAGCTTGCCCTGGAGAACAACTGGCCAGATCTGAGCTGTTCATTTTCTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR-3UTR CCA 90 bp TACTTCCCTGGGAACATTCATGGGGAGGATGTTGCCCATCCTCAGCACCTCATGCTTTCTCCTCTCCTATaGCCTCCACAAGACAGTCAG +
Preference number: 2 (lower is better)
Translates to: YFPGNIHGEDVAHPQHLMLSPLL*PPQDSQ
Trigger: CTGACTGTCTTGTGGAGGCCATAGGAGAGGAGAAAG...CATGAGGTGCTGAGGATGGGCAACATCCTCCCCATGAATGTTCCCAGGGAAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR-3UTR CCA 90 bp GGAATCCAGCCAGTGTGCTATCAGCTGTTACTTCCCTGGGAACATTCATGGGGACATTGGTGTAGGGCATaGAGTCTCGGTCATCTGTGC +
Preference number: 2 (lower is better)
Translates to: GIQPVCYQLLLPWEHSWGHWCRA*SLGHLC
Trigger: GCACAGATGACCGAGACTCCATGCCCTACACCAATG...TCCCCATGAATGTTCCCAGGGAAGTAACAGCTGATAGCACACTGGCTGGATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR-3UTR CCA 90 bp CTGCCCATTCTCCAAAAAGTGCTCCGGATTGAAGGTATTTGGAGTGGCCCACTCTCGGTCATCTGTGCTTaGCTGTCTTCCATGTCCAAT +
Preference number: 2 (lower is better)
Translates to: LPILQKVLRIEGIWSGPLSVICA*LSSMSN
Trigger: ATTGGACATGGAAGACAGCCAAGCACAGATGACCGA...GAGTGGGCCACTCCAAATACCTTCAATCCGGAGCACTTTTTGGAGAATGGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR-3UTR TCA 90 bp GTGAAGAAAATGAACAGCTCAGATCTGGCCAGTTGTTCTCCAGGGCAAGCTCTCCTGTTGATCTTGAAGTaGGGGTCAAAAGGCTGTCCT +
Preference number: 2 (lower is better)
Translates to: VKKMNSSDLASCSPGQALLLILK*GSKGCP
Trigger: AGGACAGCCTTTTGACCCTCACTTCAAGATCAACAG...GAGAGCTTGCCCTGGAGAACAACTGGCCAGATCTGAGCTGTTCATTTTCTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR-3UTR GCA 90 bp CCATTCTCCAAAAAGTGCTCCGGATTGAAGGTATTTGGAGTGGCCCACTCTTTGCAGCCTCCTTCTGTATaGGCTGCTCCAAGCTCTTTT +
Preference number: 2 (lower is better)
Translates to: PFSKKCSGLKVFGVAHSLQPPSV*AAPSSF
Trigger: AAAAGAGCTTGGAGCAGCGCATACAGAAGGAGGCTG...CAAAGAGTGGGCCACTCCAAATACCTTCAATCCGGAGCACTTTTTGGAGAATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR-3UTR TCA 90 bp GGAATCCAGCCAGTGTGCTATCAGCTGTTACTTCCCTGGGAACATTCATGGGGACTTGTCTCCGTACTTTaGCATTTCTGTAAGGAAAGC +
Preference number: 2 (lower is better)
Translates to: GIQPVCYQLLLPWEHSWGLVSVL*HFCKES
Trigger: GCTTTCCTTACAGAAATGTCAAAGTACGGAGACAAG...TCCCCATGAATGTTCCCAGGGAAGTAACAGCTGATAGCACACTGGCTGGATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR-3UTR GCA 90 bp GCAACTCATGAAAGTGACTGTCCTCATACTCAAAGCGCTCCCCAAAGGCAAAGGCTTGAGTGTCATCAGTaGGAACCTTCTTTGCTCCTT +
Preference number: 2 (lower is better)
Translates to: ATHESDCPHTQSAPQRQRLECHQ*EPSLLL
Trigger: AAGGAGCAAAGAAGGTTCGCACTGATGACACTCAAG...CCTTTGCCTTTGGGGAGCGCTTTGAGTATGAGGACAGTCACTTTCATGAGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR-3UTR CCA 90 bp GACGGCACAGATGCAGTGGCTGACTGGAGAAAGTGTGAGGCCATTTCTGAACTTATGCCTCCAAACACGTaGCTTCATCTAATAACCTCA +
Preference number: 2 (lower is better)
Translates to: DGTDAVADWRKCEAISELMPPNT*LHLITS
Trigger: TGAGGTTATTAGATGAAGCCACGTGTTTGGAGGCAT...AAGTTCAGAAATGGCCTCACACTTTCTCCAGTCAGCCACTGCATCTGTGCCGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR CAA 90 bp TTCTGTATGCGCTGCTCCAAGCTCTTTTTCCCTAATCCAAAGTTCTaGAGTGTCATCAGTGCGAACCTTCTTTGCTCCTTCCATGTCTGG +
Preference number: 2 (lower is better)
Translates to: FCMRCSKLFFPNPKF*SVISANLLCSFHVW
Trigger: CCAGACATGGAAGGAGCAAAGAAGGTTCGCACTGATGACACTCAAGAACTTTGGATTAGGGAAAAAGAGCTTGGAGCAGCGCATACAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR CAA 90 bp TCTTCCATGTCCAATTACCCTGTCAATCTCAGAGTGTACTTTCTCTaGCACTTCTGGGTTTGTAGTTATGTAGAGCAGAGCCCAGCGCAG +
Preference number: 2 (lower is better)
Translates to: SSMSNYPVNLRVYFL*HFWVCSYVEQSPAQ
Trigger: CTGCGCTGGGCTCTGCTCTACATAACTACAAACCCAGAAGTGCAAGAGAAAGTACACTCTGAGATTGACAGGGTAATTGGACATGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR-3UTR CCA 90 bp TACTTCCCTGGGAACATTCATGGGGAGGATGTTGCCCATCCTCAGCACCTCATGTTTCTCTTGCACTTCTaGGTTTGTAGTTATGTAGAG +
Preference number: 2 (lower is better)
Translates to: YFPGNIHGEDVAHPQHLMFLLHF*VCSYVE
Trigger: CTCTACATAACTACAAACCCAGAAGTGCAAGAGAAA...CATGAGGTGCTGAGGATGGGCAACATCCTCCCCATGAATGTTCCCAGGGAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR-3UTR GCA 90 bp TTATGGATGGAAAGACATTGTAGAGTTGGCACATCATTGATGCCTCCAAACACGAGTGCGAACCTTCTTTaGTCCTTCCATGTCTGGCCA +
Preference number: 2 (lower is better)
Translates to: LWMERHCRVGTSLMPPNTSANLL*SFHVWP
Trigger: TGGCCAGACATGGAAGGAGCAAAGAAGGTTCGCACT...CGTGTTTGGAGGCATCAATGATGTGCCAACTCTACAATGTCTTTCCATCCATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR-3UTR CCA 90 bp GCCATTTCTGAACTTCAAGCTCAACTTCTCATTTATTGGAGGCTTGAAGGTAAACCCTGGGAACATTCATaGGGAGGATGTTGCCCATCC +
Preference number: 2 (lower is better)
Translates to: AISELQAQLLIYWRLEGKPWEHS*GGCCPS
Trigger: GGATGGGCAACATCCTCCCCATGAATGTTCCCAGGG...TTTACCTTCAAGCCTCCAATAAATGAGAAGTTGAGCTTGAAGTTCAGAAATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR-3UTR CCA 90 bp GCCATTTCTGAACTTCAAGCTCAACTTCTCATTTATTGGAGGCTTGAAGGTAAAGTGCCCTTAGGCAGGTaGAATCCAGCCAGTGTGCTA +
Preference number: 2 (lower is better)
Translates to: AISELQAQLLIYWRLEGKVPLGR*NPASVL
Trigger: TAGCACACTGGCTGGATTCCACCTGCCTAAGGGCAC...TTTACCTTCAAGCCTCCAATAAATGAGAAGTTGAGCTTGAAGTTCAGAAATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR-3UTR TCA 90 bp AATGAAGTCTCTCGGTTCATCAGGATTCCAATCTTTCCGGTGACTCTCCATCATCTAATCCAAAGTTCTTaGGTGTCATCAGTGCGAACC +
Preference number: 2 (lower is better)
Translates to: NEVSRFIRIPIFPVTLHHLIQSS*VSSVRT
Trigger: GGTTCGCACTGATGACACTCAAGAACTTTGGATTAG...ATGATGGAGAGTCACCGGAAAGATTGGAATCCTGATGAACCGAGAGACTTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR CAA 90 bp TTTCAGCAATTTTATGAGCTCATAAATGATATACTCAGAACCAACTaGGGCGGCAGGGTGTATGTGTGTGTGTGGTCAGTCCAGGAATTT +
Preference number: 2 (lower is better)
Translates to: FQQFYELINDILRTN*GGRVYVCVWSVQEF
Trigger: AAATTCCTGGACTGACCACACACACACATACACCCTGCCGCCCAAGTTGGTTCTGAGTATATCATTTATGAGCTCATAAAATTGCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR-3UTR GCA 90 bp TTCTTCATCACCTTCATCCTATCTCCTCCTTTGTTGGTAGGCACAAGTGGTTTGTCTCTCTTCTTAAACTaGCCATTCTCCAAAAAGTGC +
Preference number: 2 (lower is better)
Translates to: FFITFILSPPLLVGTSGLSLFLN*PFSKKC
Trigger: GCACTTTTTGGAGAATGGGCAGTTTAAGAAGAGAGA...CAAACCACTTGTGCCTACCAACAAAGGAGGAGATAGGATGAAGGTGATGAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR-3UTR TCA 90 bp GCCATTTCTGAACTTCAAGCTCAACTTCTCATTTATTGGAGGCTTGAAGGTAAAAGGCAAAGGTGCAAATaGTGTTGGAAACTGCACTGT +
Preference number: 2 (lower is better)
Translates to: AISELQAQLLIYWRLEGKRQRCK*CWKLHC
Trigger: ACAGTGCAGTTTCCAACATCATTTGCACCTTTGCCT...TTTACCTTCAAGCCTCCAATAAATGAGAAGTTGAGCTTGAAGTTCAGAAATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR-3UTR GCA 90 bp AATGAAGTCTCTCGGTTCATCAGGATTCCAATCTTTCCGGTGACTCTCCATCATAATGATGTTGGAAACTaGACTGTTGATCTTGAAGTG +
Preference number: 2 (lower is better)
Translates to: NEVSRFIRIPIFPVTLHHNDVGN*TVDLEV
Trigger: CACTTCAAGATCAACAGTGCAGTTTCCAACATCATT...ATGATGGAGAGTCACCGGAAAGATTGGAATCCTGATGAACCGAGAGACTTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR CAA 90 bp CATATTGAATTATGGATGGAAAGACATTGTAGAGTTGGCACATCATaGATGCCTCCAAACACGTGGCTTCATCTAATAACCTCAGCAACT +
Preference number: 2 (lower is better)
Translates to: HIELWMERHCRVGTS*MPPNTWLHLITSAT
Trigger: AGTTGCTGAGGTTATTAGATGAAGCCACGTGTTTGGAGGCATCAATGATGTGCCAACTCTACAATGTCTTTCCATCCATAATTCAATATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR CAA 90 bp CTTCAAGCTCAACTTCTCATTTATTGGAGGCTTGAAGGTAAATTTTaGCATAAGAGCAGTGAAGAAAATGAACAGCTCAGATCTGGCCAG +
Preference number: 2 (lower is better)
Translates to: LQAQLLIYWRLEGKF*HKSSEENEQLRSGQ
Trigger: CTGGCCAGATCTGAGCTGTTCATTTTCTTCACTGCTCTTATGCAAAAATTTACCTTCAAGCCTCCAATAAATGAGAAGTTGAGCTTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR-3UTR CAA 90 bp GTGCCCTTAGGCAGGTGGAATCCAGCCAGTGTGCTATCAGCTGTTACTTCCCTGTTCATGGGGAGGATGTaGCCCATCCTCAGCACCTCA +
Preference number: 3 (lower is better)
Translates to: VPLGRWNPASVLSAVTSLFMGRM*PILSTS
Trigger: TGAGGTGCTGAGGATGGGCAACATCCTCCCCATGAA...CAGGGAAGTAACAGCTGATAGCACACTGGCTGGATTCCACCTGCCTAAGGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR CCA 72 bp AGTGAGGGTCAAAAGGCTGTCCTTTCTCCTCTCCTATaGCCTCCACAAGACAGTCAGCCTCCTTCTGTATGC +
Preference number: 3 (lower is better)
Translates to: SEGQKAVLSPLL*PPQDSQPPSVC
Trigger: GCATACAGAAGGAGGCTGACTGTCTTGTGGAGGCCATAGGAGAGGAGAAAGGACAGCCTTTTGACCCTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR CCA 72 bp GGAATCCAGCCAGTGTGCTATCAGCTGTTACTTCCCTaGGAACATTCATGGGGAGGATGTTGCCCATCCTCA +
Preference number: 3 (lower is better)
Translates to: GIQPVCYQLLLP*EHSWGGCCPSS
Trigger: TGAGGATGGGCAACATCCTCCCCATGAATGTTCCCAGGGAAGTAACAGCTGATAGCACACTGGCTGGATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR CCA 72 bp CCCATTCTCCAAAAAGTGCTCCGGATTGAAGGTATTTaGAGTGGCCCACTCTTTGGGGTCCCTGTGAAGAGC +
Preference number: 3 (lower is better)
Translates to: PILQKVLRIEGI*SGPLFGVPVKS
Trigger: GCTCTTCACAGGGACCCCAAAGAGTGGGCCACTCCAAATACCTTCAATCCGGAGCACTTTTTGGAGAATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR-3UTR CAA 90 bp GTGAAGAAAATGAACAGCTCAGATCTGGCCAGTTGTTCTCCAGGGCAAGCTCTCCAGTGCGAACCTTCTTaGCTCCTTCCATGTCTGGCC +
Preference number: 3 (lower is better)
Translates to: VKKMNSSDLASCSPGQALQCEPS*LLPCLA
Trigger: GGCCAGACATGGAAGGAGCAAAGAAGGTTCGCACTG...GAGAGCTTGCCCTGGAGAACAACTGGCCAGATCTGAGCTGTTCATTTTCTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR-3UTR CAA 90 bp CTGCCCATTCTCCAAAAAGTGCTCCGGATTGAAGGTATTTGGAGTGGCCCACTCCTCGGTCATCTGTGCTaGGCTGTCTTCCATGTCCAA +
Preference number: 3 (lower is better)
Translates to: LPILQKVLRIEGIWSGPLLGHLC*AVFHVQ
Trigger: TTGGACATGGAAGACAGCCAAGCACAGATGACCGAG...GAGTGGGCCACTCCAAATACCTTCAATCCGGAGCACTTTTTGGAGAATGGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR GCA 72 bp CAGCATTGGTGTAGGGCATGGAGTCTCGGTCATCTGTaGTTGGCTGTCTTCCATGTCCAATTACCCTGTCAA +
Preference number: 3 (lower is better)
Translates to: QHWCRAWSLGHL*LAVFHVQLPCQ
Trigger: TTGACAGGGTAATTGGACATGGAAGACAGCCAAGCACAGATGACCGAGACTCCATGCCCTACACCAATGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR CCA 72 bp GTCAAATTGGTCAGAACCATGGTGCCCTTAGGCAGGTaGAATCCAGCCAGTGTGCTATCAGCTGTTACTTCC +
Preference number: 3 (lower is better)
Translates to: VKLVRTMVPLGR*NPASVLSAVTS
Trigger: GGAAGTAACAGCTGATAGCACACTGGCTGGATTCCACCTGCCTAAGGGCACCATGGTTCTGACCAATTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR CCA 72 bp CTTCAGCATCAATGTCTAGGGACGGCACAGATGCAGTaGCTGACTGGAGAAAGTGTGAGGCCATTTCTGAAC +
Preference number: 3 (lower is better)
Translates to: LQHQCLGTAQMQ*LTGESVRPFLN
Trigger: GTTCAGAAATGGCCTCACACTTTCTCCAGTCAGCCACTGCATCTGTGCCGTCCCTAGACATTGATGCTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR GCA 72 bp GCCTCCACAAGACAGTCAGCCTCCTTCTGTATGCGCTaGTCCAAGCTCTTTTTCCCTAATCCAAAGTTCTTG +
Preference number: 3 (lower is better)
Translates to: ASTRQSASFCMR*SKLFFPNPKFL
Trigger: CAAGAACTTTGGATTAGGGAAAAAGAGCTTGGAGCAGCGCATACAGAAGGAGGCTGACTGTCTTGTGGAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR GCA 72 bp CTATGGCCTCCACAAGACAGTCAGCCTCCTTCTGTATaGGCTGCTCCAAGCTCTTTTTCCCTAATCCAAAGT +
Preference number: 3 (lower is better)
Translates to: LWPPQDSQPPSV*AAPSSFSLIQS
Trigger: ACTTTGGATTAGGGAAAAAGAGCTTGGAGCAGCGCATACAGAAGGAGGCTGACTGTCTTGTGGAGGCCATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR CCA 72 bp ATTGGTGTAGGGCATGGAGTCTCGGTCATCTGTGCTTaGCTGTCTTCCATGTCCAATTACCCTGTCAATCTC +
Preference number: 3 (lower is better)
Translates to: IGVGHGVSVICA*LSSMSNYPVNL
Trigger: GAGATTGACAGGGTAATTGGACATGGAAGACAGCCAAGCACAGATGACCGAGACTCCATGCCCTACACCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR-3UTR CAA 90 bp GTGAAGAAAATGAACAGCTCAGATCTGGCCAGTTGTTCTCCAGGGCAAGCTCTCAGGTCCAGGGTGCTGTaGATGAGGTTTTCTTCATTG +
Preference number: 3 (lower is better)
Translates to: VKKMNSSDLASCSPGQALRSRVL*MRFSSL
Trigger: CAATGAAGAAAACCTCATCAACAGCACCCTGGACCT...GAGAGCTTGCCCTGGAGAACAACTGGCCAGATCTGAGCTGTTCATTTTCTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR CCA 72 bp CCTGTCAATCTCAGAGTGTACTTTCTCTTGCACTTCTaGGTTTGTAGTTATGTAGAGCAGAGCCCAGCGCAG +
Preference number: 3 (lower is better)
Translates to: PVNLRVYFLLHF*VCSYVEQSPAQ
Trigger: CTGCGCTGGGCTCTGCTCTACATAACTACAAACCCAGAAGTGCAAGAGAAAGTACACTCTGAGATTGACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR-3UTR CAA 90 bp GACGGCACAGATGCAGTGGCTGACTGGAGAAAGTGTGAGGCCATTTCTGAACTTGTAGGCACAAGTGGTTaGAAAGTGCATGTCATTTCT +
Preference number: 3 (lower is better)
Translates to: DGTDAVADWRKCEAISELVGTSG*KVHVIS
Trigger: AGAAATGACATGCACTTTCAAACCACTTGTGCCTAC...AAGTTCAGAAATGGCCTCACACTTTCTCCAGTCAGCCACTGCATCTGTGCCGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR-3UTR CAA 90 bp GGAATCCAGCCAGTGTGCTATCAGCTGTTACTTCCCTGGGAACATTCATGGGGAAAGGTGCAAATGATGTaGGAAACTGCACTGTTGATC +
Preference number: 3 (lower is better)
Translates to: GIQPVCYQLLLPWEHSWGKVQMM*ETALLI
Trigger: GATCAACAGTGCAGTTTCCAACATCATTTGCACCTT...TCCCCATGAATGTTCCCAGGGAAGTAACAGCTGATAGCACACTGGCTGGATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR TCA 72 bp GCTGCTCCAAGCTCTTTTTCCCTAATCCAAAGTTCTTaGGTGTCATCAGTGCGAACCTTCTTTGCTCCTTCC +
Preference number: 3 (lower is better)
Translates to: AAPSSFSLIQSS*VSSVRTFFAPS
Trigger: GGAAGGAGCAAAGAAGGTTCGCACTGATGACACTCAAGAACTTTGGATTAGGGAAAAAGAGCTTGGAGCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR GCA 72 bp CTCCCCAAAGGCAAAGGTGCAAATGATGTTGGAAACTaGACTGTTGATCTTGAAGTGAGGGTCAAAAGGCTG +
Preference number: 3 (lower is better)
Translates to: LPKGKGANDVGN*TVDLEVRVKRL
Trigger: CAGCCTTTTGACCCTCACTTCAAGATCAACAGTGCAGTTTCCAACATCATTTGCACCTTTGCCTTTGGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR TCA 72 bp GGCCAGTTGTTCTCCAGGGCAAGCTCTCTTTCCCAATaGGAATGGCAGAAAAGATTCTCTCTTCTTAAACTG +
Preference number: 3 (lower is better)
Translates to: GQLFSRASSLSQ*EWQKRFSLLKL
Trigger: CAGTTTAAGAAGAGAGAATCTTTTCTGCCATTCTCATTGGGAAAGAGAGCTTGCCCTGGAGAACAACTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR TCA 72 bp TTCATTGAAACTTGTAGTAGTCTTGTCTCCGTACTTTaGCATTTCTGTAAGGAAAGCATCAATGAAGTCTCT +
Preference number: 3 (lower is better)
Translates to: FIETCSSLVSVL*HFCKESINEVS
Trigger: AGAGACTTCATTGATGCTTTCCTTACAGAAATGTCAAAGTACGGAGACAAGACTACTACAAGTTTCAATGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
CDS-3UTR CCA 90 bp GACGGCACAGATGCAGTGGCTGACTGGAGAAAGTGTGAGGCCATTTCTGAACTTCAGGCGCCAGGGTCCTaGTGGGTAGTTCTTGGGTCG +
Preference number: 4 (lower is better)
Translates to: DGTDAVADWRKCEAISELQAPGS*WVVLGS
Trigger: CGACCCAAGAACTACCCACCAGGACCCTGGCGCCTG...AAGTTCAGAAATGGCCTCACACTTTCTCCAGTCAGCCACTGCATCTGTGCCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
CDS-3UTR CCA 90 bp GTGCCCTTAGGCAGGTGGAATCCAGCCAGTGTGCTATCAGCTGTTACTTCCCTGGAAGCAGTGCCCAGATaGCTGTCTCAAAGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: VPLGRWNPASVLSAVTSLEAVPR*LSQRCP
Trigger: AGGACACCTTTGAGACAGCCATCTGGGCACTGCTTC...CAGGGAAGTAACAGCTGATAGCACACTGGCTGGATTCCACCTGCCTAAGGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
CDS-3UTR TCA 90 bp GACGGCACAGATGCAGTGGCTGACTGGAGAAAGTGTGAGGCCATTTCTGAACTTCAAGCACCAGAGTCTTaGAATGAAGCAGTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: DGTDAVADWRKCEAISELQAPES*NEAVPR
Trigger: TCTGGGCACTGCTTCATTTCAAGACTCTGGTGCTTG...AAGTTCAGAAATGGCCTCACACTTTCTCCAGTCAGCCACTGCATCTGTGCCGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR CAA 72 bp CATTGGTGTAGGGCATGGAGTCTCGGTCATCTGTGCTaGGCTGTCTTCCATGTCCAATTACCCTGTCAATCT +
Preference number: 4 (lower is better)
Translates to: HWCRAWSLGHLC*AVFHVQLPCQS
Trigger: AGATTGACAGGGTAATTGGACATGGAAGACAGCCAAGCACAGATGACCGAGACTCCATGCCCTACACCAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR CAA 72 bp CGCTGCTCCAAGCTCTTTTTCCCTAATCCAAAGTTCTaGAGTGTCATCAGTGCGAACCTTCTTTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: RCSKLFFPNPKF*SVISANLLCSF
Trigger: GAAGGAGCAAAGAAGGTTCGCACTGATGACACTCAAGAACTTTGGATTAGGGAAAAAGAGCTTGGAGCAGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR CAA 72 bp GCAGGGTGTATGTGTGTGTGTGGTCAGTCCAGGAATTaGATTCAACTTCCTTACTCCAGTTCCTCCCATCTT +
Preference number: 4 (lower is better)
Translates to: AGCMCVCGQSRN*IQLPYSSSSHL
Trigger: AAGATGGGAGGAACTGGAGTAAGGAAGTTGAATCAAATTCCTGGACTGACCACACACACACATACACCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR CAA 72 bp TTTTATGAGCTCATAAATGATATACTCAGAACCAACTaGGGCGGCAGGGTGTATGTGTGTGTGTGGTCAGTC +
Preference number: 4 (lower is better)
Translates to: FYELINDILRTN*GGRVYVCVWSV
Trigger: GACTGACCACACACACACATACACCCTGCCGCCCAAGTTGGTTCTGAGTATATCATTTATGAGCTCATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR CAA 72 bp AAGAGGTCCAGGGTGCTGTTGATGAGGTTTTCTTCATaGAAACTTGTAGTAGTCTTGTCTCCGTACTTTGAC +
Preference number: 4 (lower is better)
Translates to: KRSRVLLMRFSS*KLVVVLSPYFD
Trigger: GTCAAAGTACGGAGACAAGACTACTACAAGTTTCAATGAAGAAAACCTCATCAACAGCACCCTGGACCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR CAA 72 bp TCCAATTACCCTGTCAATCTCAGAGTGTACTTTCTCTaGCACTTCTGGGTTTGTAGTTATGTAGAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: SNYPVNLRVYFL*HFWVCSYVEQS
Trigger: GCTCTGCTCTACATAACTACAAACCCAGAAGTGCAAGAGAAAGTACACTCTGAGATTGACAGGGTAATTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR CAA 72 bp CATCTTTTCTTCATCACCTTCATCCTATCTCCTCCTTaGTTGGTAGGCACAAGTGGTTTGAAAGTGCATGTC +
Preference number: 4 (lower is better)
Translates to: HLFFITFILSPP*LVGTSGLKVHV
Trigger: GACATGCACTTTCAAACCACTTGTGCCTACCAACAAAGGAGGAGATAGGATGAAGGTGATGAAGAAAAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR CAA 72 bp TTATGGATGGAAAGACATTGTAGAGTTGGCACATCATaGATGCCTCCAAACACGTGGCTTCATCTAATAACC +
Preference number: 4 (lower is better)
Translates to: LWMERHCRVGTS*MPPNTWLHLIT
Trigger: GGTTATTAGATGAAGCCACGTGTTTGGAGGCATCAATGATGTGCCAACTCTACAATGTCTTTCCATCCATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
CDS-3UTR CCA 90 bp AATGAAGTCTCTCGGTTCATCAGGATTCCAATCTTTCCGGTGACTCTCCATCATTGCTCTAAATCCAACTaGAATAAGTTGCCCACAAAA +
Preference number: 4 (lower is better)
Translates to: NEVSRFIRIPIFPVTLHHCSKSN*NKLPTK
Trigger: TTTTGTGGGCAACTTATTCCAGTTGGATTTAGAGCA...ATGATGGAGAGTCACCGGAAAGATTGGAATCCTGATGAACCGAGAGACTTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
3UTR CAA 72 bp TTGATGAGGTTTTCTTCATTGAAACTTGTAGTAGTCTaGTCTCCGTACTTTGACATTTCTGTAAGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: LMRFSSLKLVVV*SPYFDISVRKA
Trigger: TGCTTTCCTTACAGAAATGTCAAAGTACGGAGACAAGACTACTACAAGTTTCAATGAAGAAAACCTCATCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
CDS GCA 90 bp GCTGAATCACTACATGTGGCTGCTCTAAATCCAACTGGAATAAGTTaGCCACAAAAGGCAGGCGCCAGGGTCCTGGTGGGTAGTTCTTGG +
Preference number: 5 (lower is better)
Translates to: AESLHVAALNPTGIS*PQKAGARVLVGSSW
Trigger: CCAAGAACTACCCACCAGGACCCTGGCGCCTGCCTTTTGTGGGCAACTTATTCCAGTTGGATTTAGAGCAGCCACATGTAGTGATTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097972.5
ENSMUST00000121694.3
CDS-3UTR CAA 90 bp GACGGCACAGATGCAGTGGCTGACTGGAGAAAGTGTGAGGCCATTTCTGAACTTTCCAACTGGAATAAGTaGCCCACAAAAGGCAGGCGC +
Preference number: 5 (lower is better)
Translates to: DGTDAVADWRKCEAISELSNWNK*PTKGRR
Trigger: GCGCCTGCCTTTTGTGGGCAACTTATTCCAGTTGGA...AAGTTCAGAAATGGCCTCACACTTTCTCCAGTCAGCCACTGCATCTGTGCCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000121694.3
CDS TCA 90 bp CCAAAGTCCAGGCTAGTTAGGTTTCCATACTTCTTCACAAACTGCTaGATCACTACATGTGGCTGCTCTAAATCCAACTGGAATAAGTTG +
Preference number: 5 (lower is better)
Translates to: PKSRLVRFPYFFTNC*ITTCGCSKSNWNKL
Trigger: CAACTTATTCCAGTTGGATTTAGAGCAGCCACATGTAGTGATTCAGCAGTTTGTGAAGAAGTATGGAAACCTAACTAGCCTGGACTTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097972.5
CDS GCA 90 bp TTCCCTAATCCAAAGTTCTTGAGTGTCATCAGTGCGAACCTTCTTTaGTCCTTCCATGTCTGGCCATTGGAAATGATCAATCCATTGTTA +
Preference number: 5 (lower is better)
Translates to: FPNPKFLSVISANLL*SFHVWPLEMINPLL
Trigger: TAACAATGGATTGATCATTTCCAATGGCCAGACATGGAAGGAGCAAAGAAGGTTCGCACTGATGACACTCAAGAACTTTGGATTAGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097972.5
CDS GCA 72 bp GACAGCAGCAAGCACCAGAGTCTTGAAATGAAGCAGTaGCCAGATGGCTGTCTCAAAGGTGTCCTCAGTAGC +
Preference number: 6 (lower is better)
Translates to: DSSKHQSLEMKQ*PDGCLKGVLSS
Trigger: GCTACTGAGGACACCTTTGAGACAGCCATCTGGGCACTGCTTCATTTCAAGACTCTGGTGCTTGCTGCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097972.5
ENSMUST00000121694.3
CDS GCA 72 bp CCAAAGTTCTTGAGTGTCATCAGTGCGAACCTTCTTTaGTCCTTCCATGTCTGGCCATTGGAAATGATCAAT +
Preference number: 6 (lower is better)
Translates to: PKFLSVISANLL*SFHVWPLEMIN
Trigger: ATTGATCATTTCCAATGGCCAGACATGGAAGGAGCAAAGAAGGTTCGCACTGATGACACTCAAGAACTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097972.5
CDS CAA 72 bp TCCAAAGTTCTTGAGTGTCATCAGTGCGAACCTTCTTaGCTCCTTCCATGTCTGGCCATTGGAAATGATCAA +
Preference number: 6 (lower is better)
Translates to: SKVLECHQCEPS*LLPCLAIGNDQ
Trigger: TTGATCATTTCCAATGGCCAGACATGGAAGGAGCAAAGAAGGTTCGCACTGATGACACTCAAGAACTTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097972.5
CDS TCA 72 bp AGGCTAGTTAGGTTTCCATACTTCTTCACAAACTGCTaGATCACTACATGTGGCTGCTCTAAATCCAACTGG +
Preference number: 6 (lower is better)
Translates to: RLVRFPYFFTNC*ITTCGCSKSNW
Trigger: CCAGTTGGATTTAGAGCAGCCACATGTAGTGATTCAGCAGTTTGTGAAGAAGTATGGAAACCTAACTAGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097972.5
CDS CAA 90 bp CTTCTTTGCTCCTTCCATGTCTGGCCATTGGAAATGATCAATCCATaGTTATTAAAGACACGTTTTCTGATAGGTGTAATAGGACGATTC +
Preference number: 6 (lower is better)
Translates to: LLCSFHVWPLEMINP*LLKTRFLIGVIGRF
Trigger: GAATCGTCCTATTACACCTATCAGAAAACGTGTCTTTAATAACAATGGATTGATCATTTCCAATGGCCAGACATGGAAGGAGCAAAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097972.5