Pregenerated sensors for CYP2J11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066097Ensembl transcript IDs: ENSMUST00000015368.8
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | TCCTTTTATGTGAGCAAGGCCAAGAATCTTCAGGGCATACTCCAATTCTTCTTGCAGGCGCCTGGGCCCTaGAGGATAGTTCTTGGGGCG | + |
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Preference number: 4 (lower is better) Translates to: SFYVSKAKNLQGILQFFLQAPGP*RIVLGA Trigger: CGCCCCAAGAACTATCCTCCAGGGCCCAGGCGCCTG...CAAGAAGAATTGGAGTATGCCCTGAAGATTCTTGGCCTTGCTCACATAAAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS-3UTR CCA 90 bp | TATGTGAGCAAGGCCAAGAATCTTCAGGGCATACTCCAATTCTTCTTGTTCTTTCAAGTTGCCCACAAATaGCAGGCGCCTGGGCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: YVSKAKNLQGILQFFLFFQVAHK*QAPGPW Trigger: CCAGGGCCCAGGCGCCTGCCATTTGTGGGCAACTTG...AAAGAACAAGAAGAATTGGAGTATGCCCTGAAGATTCTTGGCCTTGCTCACATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS-3UTR TCA 90 bp | TCCTTTTATGTGAGCAAGGCCAAGAATCTTCAGGGCATACTCCAATTCTTCTTGTGGGGCGCCTGTTTTTaGGGTAGTCAGCAAGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: SFYVSKAKNLQGILQFFLWGACF*GSQQGA Trigger: TGCTCCTTGCTGACTACCTCAAAAACAGGCGCCCCA...CAAGAAGAATTGGAGTATGCCCTGAAGATTCTTGGCCTTGCTCACATAAAAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS-3UTR TCA 90 bp | TTCTGTTATGCCTTTCTCCTTTTATGTGAGCAAGGCCAAGAATCTTCAGGGCATCCAGAGATGGATTGCTaGGCAGATGTTAGCCACCAG | + |
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Preference number: 4 (lower is better) Translates to: FCYAFLLLCEQGQESSGHPEMDC*ADVSHQ Trigger: CTGGTGGCTAACATCTGCTCAGCAATCCATCTCTGG...ATGCCCTGAAGATTCTTGGCCTTGCTCACATAAAAGGAGAAAGGCATAACAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS-3UTR TCA 90 bp | TATGTGAGCAAGGCCAAGAATCTTCAGGGCATACTCCAATTCTTCTTGTTCTTTGTGTTAGGCCCATTCTaGACTTCAGGCTCGGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: YVSKAKNLQGILQFFLFFVLGPF*TSGSAS Trigger: AGAAGCCGAGCCTGAAGTTCAGAATGGGCCTAACAC...AAAGAACAAGAAGAATTGGAGTATGCCCTGAAGATTCTTGGCCTTGCTCACATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS-3UTR TCA 90 bp | TTCTGTTATGCCTTTCTCCTTTTATGTGAGCAAGGCCAAGAATCTTCAGGGCATTTGTTGATCCTGAAGTaGGGGTCAAAAGGCTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: FCYAFLLLCEQGQESSGHLLILK*GSKGCP Trigger: AGGACAGCCTTTTGACCCTCACTTCAGGATCAACAA...ATGCCCTGAAGATTCTTGGCCTTGCTCACATAAAAGGAGAAAGGCATAACAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS-3UTR TCA 90 bp | TCCTTTTATGTGAGCAAGGCCAAGAATCTTCAGGGCATACTCCAATTCTTCTTGGCAGATCAGTCAAATTaGTCAGAACCATGGTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: SFYVSKAKNLQGILQFFLADQSN*SEPWCP Trigger: AGGGCACCATGGTTCTGATCAATTTGACTGATCTGC...CAAGAAGAATTGGAGTATGCCCTGAAGATTCTTGGCCTTGCTCACATAAAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS-3UTR TCA 90 bp | GCCTTTCTCCTTTTATGTGAGCAAGGCCAAGAATCTTCAGGGCATACTCCAATTAAAAGTGCTCTGGATTaGAGACATTTGGAGTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: AFLLLCEQGQESSGHTPIKSALD*RHLECP Trigger: GGGACACTCCAAATGTCTTCAATCCAGAGCACTTTT...AATTGGAGTATGCCCTGAAGATTCTTGGCCTTGCTCACATAAAAGGAGAAAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS-3UTR CCA 90 bp | TGTTATGCCTTTCTCCTTTTATGTGAGCAAGGCCAAGAATCTTCAGGGCATACTCATTGGTGTAGGGCATaGAGTCTTGGTCATCTAAGG | + |
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Preference number: 4 (lower is better) Translates to: CYAFLLLCEQGQESSGHTHWCRA*SLGHLR Trigger: CCTTAGATGACCAAGACTCCATGCCCTACACCAATG...AGTATGCCCTGAAGATTCTTGGCCTTGCTCACATAAAAGGAGAAAGGCATAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS-3UTR CCA 90 bp | GCCTTTCTCCTTTTATGTGAGCAAGGCCAAGAATCTTCAGGGCATACTCCAATTTGGATTGAAGACATTTaGAGTGTCCCACTCTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AFLLLCEQGQESSGHTPIWIEDI*SVPLFG Trigger: CCCAAAGAGTGGGACACTCCAAATGTCTTCAATCCA...AATTGGAGTATGCCCTGAAGATTCTTGGCCTTGCTCACATAAAAGGAGAAAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS-3UTR CCA 90 bp | TTCTGTTATGCCTTTCTCCTTTTATGTGAGCAAGGCCAAGAATCTTCAGGGCATCTTTCTCCTCTCCTATaGCCTTCACAAGATGGTAAG | + |
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Preference number: 4 (lower is better) Translates to: FCYAFLLLCEQGQESSGHLSPLL*PSQDGK Trigger: CTTACCATCTTGTGAAGGCCATAGGAGAGGAGAAAG...ATGCCCTGAAGATTCTTGGCCTTGCTCACATAAAAGGAGAAAGGCATAACAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS-3UTR TCA 90 bp | TGTTATGCCTTTCTCCTTTTATGTGAGCAAGGCCAAGAATCTTCAGGGCATACTAGGGCAGTCCACTTATaGTCACTGAAGAAATGTAAC | + |
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Preference number: 4 (lower is better) Translates to: CYAFLLLCEQGQESSGHTRAVHL*SLKKCN Trigger: GTTACATTTCTTCAGTGATCATAAGTGGACTGCCCT...AGTATGCCCTGAAGATTCTTGGCCTTGCTCACATAAAAGGAGAAAGGCATAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS-3UTR GCA 90 bp | TGTTATGCCTTTCTCCTTTTATGTGAGCAAGGCCAAGAATCTTCAGGGCATACTTCTTTGGGGTCCCTATaGAGATCAGTCAAATTGATC | + |
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Preference number: 4 (lower is better) Translates to: CYAFLLLCEQGQESSGHTSLGSL*RSVKLI Trigger: GATCAATTTGACTGATCTGCATAGGGACCCCAAAGA...AGTATGCCCTGAAGATTCTTGGCCTTGCTCACATAAAAGGAGAAAGGCATAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS-3UTR GCA 90 bp | GCCTTTCTCCTTTTATGTGAGCAAGGCCAAGAATCTTCAGGGCATACTCCAATTTTTTTAAATACATGTTaGCTTGCAGCTAAACTGGGG | + |
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Preference number: 4 (lower is better) Translates to: AFLLLCEQGQESSGHTPIFLNTC*LAAKLG Trigger: CCCCAGTTTAGCTGCAAGGCAACATGTATTTAAAAA...AATTGGAGTATGCCCTGAAGATTCTTGGCCTTGCTCACATAAAAGGAGAAAGGC 41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS-3UTR GCA 90 bp | TGTTATGCCTTTCTCCTTTTATGTGAGCAAGGCCAAGAATCTTCAGGGCATACTCTTGAGTATTGTCAGTaGGAACTTTCTTTGCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: CYAFLLLCEQGQESSGHTLEYCQ*ELSLLL Trigger: AAGGAGCAAAGAAAGTTCGCACTGACAATACTCAAG...AGTATGCCCTGAAGATTCTTGGCCTTGCTCACATAAAAGGAGAAAGGCATAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS-3UTR CCA 90 bp | TTCTGTTATGCCTTTCTCCTTTTATGTGAGCAAGGCCAAGAATCTTCAGGGCATCGGCTTCTCATTGATTaGGGACTTGAATGTAAATTT | + |
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Preference number: 4 (lower is better) Translates to: FCYAFLLLCEQGQESSGHRLLID*GLECKF Trigger: AAATTTACATTCAAGTCCCCAATCAATGAGAAGCCG...ATGCCCTGAAGATTCTTGGCCTTGCTCACATAAAAGGAGAAAGGCATAACAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS-3UTR GCA 90 bp | CTCACTGCCAAATTTAGGCACCAGGAATCCAGATATTTGATTCAATTTCTTAGCAATGAAGTCTCTTGGTaGAGAAGGATTCCAATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LTAKFRHQESRYLIQFLSNEVSW*RRIPIF Trigger: GAAGATTGGAATCCTTCTGCACCAAGAGACTTCATT...GCTAAGAAATTGAATCAAATATCTGGATTCCTGGTGCCTAAATTTGGCAGTGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS-3UTR GCA 90 bp | TATGTGAGCAAGGCCAAGAATCTTCAGGGCATACTCCAATTCTTCTTGTTCTTTGAGTGTACTTTTTCTTaGACTTCTGGGTTAACAGTT | + |
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Preference number: 4 (lower is better) Translates to: YVSKAKNLQGILQFFLFFECTFS*TSGLTV Trigger: AACTGTTAACCCAGAAGTGCAAGAAAAAGTACACTC...AAAGAACAAGAAGAATTGGAGTATGCCCTGAAGATTCTTGGCCTTGCTCACATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS-3UTR CCA 90 bp | CTCACTGCCAAATTTAGGCACCAGGAATCCAGATATTTGATTCAATTTCTTAGCATCAATGAAGTCTCTTaGTGCAGAAGGATTCCAATC | + |
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Preference number: 4 (lower is better) Translates to: LTAKFRHQESRYLIQFLSINEVS*CRRIPI Trigger: GATTGGAATCCTTCTGCACCAAGAGACTTCATTGAT...GCTAAGAAATTGAATCAAATATCTGGATTCCTGGTGCCTAAATTTGGCAGTGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS-3UTR TCA 90 bp | CTCACTGCCAAATTTAGGCACCAGGAATCCAGATATTTGATTCAATTTCTTAGCCTAATCCAAAATTCTTaGGTATTGTCAGTGCGAACT | + |
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Preference number: 4 (lower is better) Translates to: LTAKFRHQESRYLIQFLSLIQNS*VLSVRT Trigger: AGTTCGCACTGACAATACTCAAGAATTTTGGATTAG...GCTAAGAAATTGAATCAAATATCTGGATTCCTGGTGCCTAAATTTGGCAGTGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS-3UTR GCA 90 bp | TATGTGAGCAAGGCCAAGAATCTTCAGGGCATACTCCAATTCTTCTTGTTCTTTTCTTTCTTCTTAAACTaGCCATTCTCTAAAAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: YVSKAKNLQGILQFFLFFSFFLN*PFSKKC Trigger: GCACTTTTTAGAGAATGGGCAGTTTAAGAAGAAAGA...AAAGAACAAGAAGAATTGGAGTATGCCCTGAAGATTCTTGGCCTTGCTCACATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS CCA 90 bp | ATCAAACTGGAACAAGTTGCCCACAAATGGCAGGCGCCTGGGCCCTaGAGGATAGTTCTTGGGGCGCCTGTTTTTGAGGTAGTCAGCAAG | + |
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Preference number: 5 (lower is better) Translates to: IKLEQVAHKWQAPGP*RIVLGAPVFEVVSK Trigger: CTTGCTGACTACCTCAAAAACAGGCGCCCCAAGAACTATCCTCCAGGGCCCAGGCGCCTGCCATTTGTGGGCAACTTGTTCCAGTTTGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS CCA 90 bp | AACGGCTGGATCCCCAAATGCAGACGTGACACATCTAAATCAAACTaGAACAAGTTGCCCACAAATGGCAGGCGCCTGGGCCCTGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: NGWIPKCRRDTSKSN*NKLPTNGRRLGPGG Trigger: TCCTCCAGGGCCCAGGCGCCTGCCATTTGTGGGCAACTTGTTCCAGTTTGATTTAGATGTGTCACGTCTGCATTTGGGGATCCAGCCGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS TCA 90 bp | ATGATGGAGCAAATGATGTTGCCAACAGCATTGTTGATCCTGAAGTaGGGGTCAAAAGGCTGTCCTTTCTCCTCTCCTATGGCCTTCACA | + |
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Preference number: 5 (lower is better) Translates to: MMEQMMLPTALLILK*GSKGCPFSSPMAFT Trigger: TGTGAAGGCCATAGGAGAGGAGAAAGGACAGCCTTTTGACCCTCACTTCAGGATCAACAATGCTGTTGGCAACATCATTTGCTCCATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS-3UTR CAA 90 bp | TGTTATGCCTTTCTCCTTTTATGTGAGCAAGGCCAAGAATCTTCAGGGCATACTCAGTGCGAACTTTCTTaGCTCCTTCCATGTCTGGCC | + |
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Preference number: 5 (lower is better) Translates to: CYAFLLLCEQGQESSGHTQCELS*LLPCLA Trigger: GGCCAGACATGGAAGGAGCAAAGAAAGTTCGCACTG...AGTATGCCCTGAAGATTCTTGGCCTTGCTCACATAAAAGGAGAAAGGCATAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS-3UTR CAA 90 bp | TATGTGAGCAAGGCCAAGAATCTTCAGGGCATACTCCAATTCTTCTTGTTCTTTTTCACAACTGGCCAATaGTTCCCCAGGGCAAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: YVSKAKNLQGILQFFLFFFTTGQ*FPRASS Trigger: AGAGCTTGCCCTGGGGAACAATTGGCCAGTTGTGAA...AAAGAACAAGAAGAATTGGAGTATGCCCTGAAGATTCTTGGCCTTGCTCACATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS TCA 90 bp | GCATCAATGAAGTCTCTTGGTGCAGAAGGATTCCAATCTTCCCGGTaGCTGTCCATCATACGGGAAACAAACAATTTCAGTTTTTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: ASMKSLGAEGFQSSR*LSIIRETNNFSFSQ Trigger: CTGGGAAAAACTGAAATTGTTTGTTTCCCGTATGATGGACAGTCACCGGGAAGATTGGAATCCTTCTGCACCAAGAGACTTCATTGATGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS GCA 90 bp | GTACTTTGTCATTTCTGTAAGGAAAGCATCAATGAAGTCTCTTGGTaGAGAAGGATTCCAATCTTCCCGGTGACTGTCCATCATACGGGA | + |
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Preference number: 5 (lower is better) Translates to: VLCHFCKESINEVSW*RRIPIFPVTVHHTG Trigger: TCCCGTATGATGGACAGTCACCGGGAAGATTGGAATCCTTCTGCACCAAGAGACTTCATTGATGCTTTCCTTACAGAAATGACAAAGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS CCA 90 bp | TGGGTACTTTGTCATTTCTGTAAGGAAAGCATCAATGAAGTCTCTTaGTGCAGAAGGATTCCAATCTTCCCGGTGACTGTCCATCATACG | + |
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Preference number: 5 (lower is better) Translates to: WVLCHFCKESINEVS*CRRIPIFPVTVHHT Trigger: CGTATGATGGACAGTCACCGGGAAGATTGGAATCCTTCTGCACCAAGAGACTTCATTGATGCTTTCCTTACAGAAATGACAAAGTACCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS-3UTR CAA 90 bp | CTCACTGCCAAATTTAGGCACCAGGAATCCAGATATTTGATTCAATTTCTTAGCTCAAACTGGAACAAGTaGCCCACAAATGGCAGGCGC | + |
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Preference number: 5 (lower is better) Translates to: LTAKFRHQESRYLIQFLSSNWNK*PTNGRR Trigger: GCGCCTGCCATTTGTGGGCAACTTGTTCCAGTTTGA...GCTAAGAAATTGAATCAAATATCTGGATTCCTGGTGCCTAAATTTGGCAGTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS-3UTR CAA 90 bp | TTCTGTTATGCCTTTCTCCTTTTATGTGAGCAAGGCCAAGAATCTTCAGGGCATTGCAGATCAGTCAAATaGATCAGAACCATGGTGCCC | + |
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Preference number: 5 (lower is better) Translates to: FCYAFLLLCEQGQESSGHCRSVK*IRTMVP Trigger: GGGCACCATGGTTCTGATCAATTTGACTGATCTGCA...ATGCCCTGAAGATTCTTGGCCTTGCTCACATAAAAGGAGAAAGGCATAACAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS-3UTR CAA 90 bp | TTCTGTTATGCCTTTCTCCTTTTATGTGAGCAAGGCCAAGAATCTTCAGGGCATAGGCTCGGCTTCTCATaGATTGGGGACTTGAATGTA | + |
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Preference number: 5 (lower is better) Translates to: FCYAFLLLCEQGQESSGHRLGFS*IGDLNV Trigger: TACATTCAAGTCCCCAATCAATGAGAAGCCGAGCCT...ATGCCCTGAAGATTCTTGGCCTTGCTCACATAAAAGGAGAAAGGCATAACAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS TCA 90 bp | CTTGTATACACTGCTCCAAGCTCTTCTTCCCTAATCCAAAATTCTTaGGTATTGTCAGTGCGAACTTTCTTTGCTCCTTCCATGTCTGGC | + |
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Preference number: 5 (lower is better) Translates to: LVYTAPSSSSLIQNS*VLSVRTFFAPSMSG Trigger: GCCAGACATGGAAGGAGCAAAGAAAGTTCGCACTGACAATACTCAAGAATTTTGGATTAGGGAAGAAGAGCTTGGAGCAGTGTATACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS-3UTR CAA 90 bp | GCCTTTCTCCTTTTATGTGAGCAAGGCCAAGAATCTTCAGGGCATACTCCAATTAAAAAGTGCTCTGGATaGAAGACATTTGGAGTGTCC | + |
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Preference number: 5 (lower is better) Translates to: AFLLLCEQGQESSGHTPIKKCSG*KTFGVS Trigger: GGACACTCCAAATGTCTTCAATCCAGAGCACTTTTT...AATTGGAGTATGCCCTGAAGATTCTTGGCCTTGCTCACATAAAAGGAGAAAGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS-3UTR CAA 90 bp | TATGTGAGCAAGGCCAAGAATCTTCAGGGCATACTCCAATTCTTCTTGTTCTTTCCAGTGATAGCTTCTTaGATTAAGGGCAGTCCACTT | + |
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Preference number: 5 (lower is better) Translates to: YVSKAKNLQGILQFFLFFPVIAS*IKGSPL Trigger: AAGTGGACTGCCCTTAATCAAAGAAGCTATCACTGG...AAAGAACAAGAAGAATTGGAGTATGCCCTGAAGATTCTTGGCCTTGCTCACATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS-3UTR CAA 90 bp | TCCTTTTATGTGAGCAAGGCCAAGAATCTTCAGGGCATACTCCAATTCTTCTTGAAGCTCTCTTTCCCATaGAGAAAGGCAGAAAGGATT | + |
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Preference number: 5 (lower is better) Translates to: SFYVSKAKNLQGILQFFLKLSFP*RKAERI Trigger: AATCCTTTCTGCCTTTCTCAATGGGAAAGAGAGCTT...CAAGAAGAATTGGAGTATGCCCTGAAGATTCTTGGCCTTGCTCACATAAAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS-3UTR CAA 90 bp | TATGTGAGCAAGGCCAAGAATCTTCAGGGCATACTCCAATTCTTCTTGTTCTTTATGGAGCAAATGATGTaGCCAACAGCATTGTTGATC | + |
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Preference number: 5 (lower is better) Translates to: YVSKAKNLQGILQFFLFFMEQMM*PTALLI Trigger: GATCAACAATGCTGTTGGCAACATCATTTGCTCCAT...AAAGAACAAGAAGAATTGGAGTATGCCCTGAAGATTCTTGGCCTTGCTCACATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS-3UTR CAA 90 bp | TTCTGTTATGCCTTTCTCCTTTTATGTGAGCAAGGCCAAGAATCTTCAGGGCATAGAGTGTACTTTTTCTaGCACTTCTGGGTTAACAGT | + |
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Preference number: 5 (lower is better) Translates to: FCYAFLLLCEQGQESSGHRVYFF*HFWVNS Trigger: ACTGTTAACCCAGAAGTGCAAGAAAAAGTACACTCT...ATGCCCTGAAGATTCTTGGCCTTGCTCACATAAAAGGAGAAAGGCATAACAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS TCA 90 bp | GGAAGACATTGTAGAGCACTGACATCATTGATGCCTCAGAACATATaGTTTCATCTGCTAACTTCAGTAGCTCCTGAAACTGATTGTCAT | + |
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Preference number: 5 (lower is better) Translates to: GRHCRALTSLMPQNI*FHLLTSVAPETDCH Trigger: ATGACAATCAGTTTCAGGAGCTACTGAAGTTAGCAGATGAAATCATATGTTCTGAGGCATCAATGATGTCAGTGCTCTACAATGTCTTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS CCA 72 bp | GAACAAGTTGCCCACAAATGGCAGGCGCCTGGGCCCTaGAGGATAGTTCTTGGGGCGCCTGTTTTTGAGGTA | + |
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Preference number: 6 (lower is better) Translates to: EQVAHKWQAPGP*RIVLGAPVFEV Trigger: TACCTCAAAAACAGGCGCCCCAAGAACTATCCTCCAGGGCCCAGGCGCCTGCCATTTGTGGGCAACTTGTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS CCA 72 bp | ATCCCCAAATGCAGACGTGACACATCTAAATCAAACTaGAACAAGTTGCCCACAAATGGCAGGCGCCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: IPKCRRDTSKSN*NKLPTNGRRLG Trigger: GCCCAGGCGCCTGCCATTTGTGGGCAACTTGTTCCAGTTTGATTTAGATGTGTCACGTCTGCATTTGGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS TCA 72 bp | AAGAAGAGTGAGAAGCAGAGTCCAGAGATGGATTGCTaGGCAGATGTTAGCCACCAGGCAAGTTGCAATAGC | + |
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Preference number: 6 (lower is better) Translates to: KKSEKQSPEMDC*ADVSHQASCNS Trigger: GCTATTGCAACTTGCCTGGTGGCTAACATCTGCTCAGCAATCCATCTCTGGACTCTGCTTCTCACTCTTCTT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS GCA 72 bp | AAGACATTTGGAGTGTCCCACTCTTTGGGGTCCCTATaGAGATCAGTCAAATTGATCAGAACCATGGTGCCC | + |
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Preference number: 6 (lower is better) Translates to: KTFGVSHSLGSL*RSVKLIRTMVP Trigger: GGGCACCATGGTTCTGATCAATTTGACTGATCTGCATAGGGACCCCAAAGAGTGGGACACTCCAAATGTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS CCA 72 bp | AGTGAGGGTCAAAAGGCTGTCCTTTCTCCTCTCCTATaGCCTTCACAAGATGGTAAGCCTCTTCTTGTATAC | + |
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Preference number: 6 (lower is better) Translates to: SEGQKAVLSPLL*PSQDGKPLLVY Trigger: GTATACAAGAAGAGGCTTACCATCTTGTGAAGGCCATAGGAGAGGAGAAAGGACAGCCTTTTGACCCTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS TCA 72 bp | CAAATGATGTTGCCAACAGCATTGTTGATCCTGAAGTaGGGGTCAAAAGGCTGTCCTTTCTCCTCTCCTATG | + |
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Preference number: 6 (lower is better) Translates to: QMMLPTALLILK*GSKGCPFSSPM Trigger: CATAGGAGAGGAGAAAGGACAGCCTTTTGACCCTCACTTCAGGATCAACAATGCTGTTGGCAACATCATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS TCA 72 bp | AAGTCTCTTGGTGCAGAAGGATTCCAATCTTCCCGGTaGCTGTCCATCATACGGGAAACAAACAATTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: KSLGAEGFQSSR*LSIIRETNNFS Trigger: ACTGAAATTGTTTGTTTCCCGTATGATGGACAGTCACCGGGAAGATTGGAATCCTTCTGCACCAAGAGACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS GCA 72 bp | CATTTCTGTAAGGAAAGCATCAATGAAGTCTCTTGGTaGAGAAGGATTCCAATCTTCCCGGTGACTGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: HFCKESINEVSW*RRIPIFPVTVH Trigger: ATGGACAGTCACCGGGAAGATTGGAATCCTTCTGCACCAAGAGACTTCATTGATGCTTTCCTTACAGAAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS TCA 72 bp | ACTGCTCCAAGCTCTTCTTCCCTAATCCAAAATTCTTaGGTATTGTCAGTGCGAACTTTCTTTGCTCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: TAPSSSSLIQNS*VLSVRTFFAPS Trigger: GGAAGGAGCAAAGAAAGTTCGCACTGACAATACTCAAGAATTTTGGATTAGGGAAGAAGAGCTTGGAGCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS CCA 72 bp | ACGCTAATTACGTTTCCATACTTCTTCACAAACGGCTaGATCCCCAAATGCAGACGTGACACATCTAAATCA | + |
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Preference number: 6 (lower is better) Translates to: TLITFPYFFTNG*IPKCRRDTSKS Trigger: TGATTTAGATGTGTCACGTCTGCATTTGGGGATCCAGCCGTTTGTGAAGAAGTATGGAAACGTAATTAGCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS CCA 72 bp | GCCCATTCTGAACTTCAGGCTCGGCTTCTCATTGATTaGGGACTTGAATGTAAATTTTTGCATAAGAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: AHSELQARLLID*GLECKFLHKSS Trigger: ACTGCTCTTATGCAAAAATTTACATTCAAGTCCCCAATCAATGAGAAGCCGAGCCTGAAGTTCAGAATGGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS CAA 72 bp | CACTGCTCCAAGCTCTTCTTCCCTAATCCAAAATTCTaGAGTATTGTCAGTGCGAACTTTCTTTGCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: HCSKLFFPNPKF*SIVSANFLCSF Trigger: GAAGGAGCAAAGAAAGTTCGCACTGACAATACTCAAGAATTTTGGATTAGGGAAGAAGAGCTTGGAGCAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS CAA 90 bp | TCTTGTATACACTGCTCCAAGCTCTTCTTCCCTAATCCAAAATTCTaGAGTATTGTCAGTGCGAACTTTCTTTGCTCCTTCCATGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: SCIHCSKLFFPNPKF*SIVSANFLCSFHVW Trigger: CCAGACATGGAAGGAGCAAAGAAAGTTCGCACTGACAATACTCAAGAATTTTGGATTAGGGAAGAAGAGCTTGGAGCAGTGTATACAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS CAA 72 bp | GTTAGGCCCATTCTGAACTTCAGGCTCGGCTTCTCATaGATTGGGGACTTGAATGTAAATTTTTGCATAAGA | + |
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Preference number: 6 (lower is better) Translates to: VRPILNFRLGFS*IGDLNVNFCIR Trigger: TCTTATGCAAAAATTTACATTCAAGTCCCCAATCAATGAGAAGCCGAGCCTGAAGTTCAGAATGGGCCTAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS TCA 72 bp | TGTAGAGCACTGACATCATTGATGCCTCAGAACATATaGTTTCATCTGCTAACTTCAGTAGCTCCTGAAACT | + |
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Preference number: 6 (lower is better) Translates to: CRALTSLMPQNI*FHLLTSVAPET Trigger: AGTTTCAGGAGCTACTGAAGTTAGCAGATGAAATCATATGTTCTGAGGCATCAATGATGTCAGTGCTCTACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS CAA 72 bp | CTGAACTTCAGGCTCGGCTTCTCATTGATTGGGGACTaGAATGTAAATTTTTGCATAAGAGCAGTGAAGAAA | + |
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Preference number: 6 (lower is better) Translates to: LNFRLGFSLIGD*NVNFCIRAVKK Trigger: TTTCTTCACTGCTCTTATGCAAAAATTTACATTCAAGTCCCCAATCAATGAGAAGCCGAGCCTGAAGTTCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS CAA 72 bp | TTCAAAAAGTTTTGTTCCATGCCAGTGATAGCTTCTTaGATTAAGGGCAGTCCACTTATGATCACTGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: FKKFCSMPVIAS*IKGSPLMITEE Trigger: TTCTTCAGTGATCATAAGTGGACTGCCCTTAATCAAAGAAGCTATCACTGGCATGGAACAAAACTTTTTGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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| CDS CCA 72 bp | TTTCAGTTTTTCCCAGTTGCTAAACAGTTTTTGTTGTaGTCCAGGAAGATATTTAAATATGGATGGGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: FQFFPVAKQFLL*SRKIFKYGWED Trigger: GTCTTCCCATCCATATTTAAATATCTTCCTGGACCACAACAAAAACTGTTTAGCAACTGGGAAAAACTGAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000015368.8 |
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