Pregenerated sensors for CYP2G1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049685Ensembl transcript IDs: ENSMUST00000040944.9
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCTTCAAGGAGTATGGAGGATTGAAGGCAGATGGTGTGTGTGTGTaGACTTCAGCAGAGCTCAGCTCTCAGATGACTCTTGGCTGGTCT | + |
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Preference number: 1 (lower is better) Translates to: LFKEYGGLKADGVCV*TSAELSSQMTLGWS Trigger: AGACCAGCCAAGAGTCATCTGAGAGCTGAGCTCTGCTGAAGTTCACACACACACACCATCTGCCTTCAATCCTCCATACTCCTTGAAGAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| 3UTR CCA 90 bp | GTGAGAGTGACCTCTCTTCAAGGAGTATGGAGGATTGAAGGCAGATaGTGTGTGTGTGTGAACTTCAGCAGAGCTCAGCTCTCAGATGAC | + |
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Preference number: 1 (lower is better) Translates to: VRVTSLQGVWRIEGR*CVCVNFSRAQLSDD Trigger: GTCATCTGAGAGCTGAGCTCTGCTGAAGTTCACACACACACACCATCTGCCTTCAATCCTCCATACTCCTTGAAGAGAGGTCACTCTCAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| 3UTR TCA 90 bp | CAGAACAACAGTGAGAGTGACCTCTCTTCAAGGAGTATGGAGGATTaGAGGCAGATGGTGTGTGTGTGTGAACTTCAGCAGAGCTCAGCT | + |
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Preference number: 1 (lower is better) Translates to: QNNSESDLSSRSMED*RQMVCVCELQQSSA Trigger: AGCTGAGCTCTGCTGAAGTTCACACACACACACCATCTGCCTTCAATCCTCCATACTCCTTGAAGAGAGGTCACTCTCACTGTTGTTCTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| 3UTR CCA 90 bp | CATGGTCTCAGAACAACAGTGAGAGTGACCTCTCTTCAAGGAGTATaGAGGATTGAAGGCAGATGGTGTGTGTGTGTGAACTTCAGCAGA | + |
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Preference number: 1 (lower is better) Translates to: HGLRTTVRVTSLQGV*RIEGRWCVCVNFSR Trigger: TCTGCTGAAGTTCACACACACACACCATCTGCCTTCAATCCTCCATACTCCTTGAAGAGAGGTCACTCTCACTGTTGTTCTGAGACCATG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| 3UTR CCA 90 bp | GGAGGAGAAATAAAAGCAAACAGGAAAGAATTGCAAGGTATATTCTaGTCAATATCAGGGCAAAGACAAAGATTATGTAAGCTGACAGCA | + |
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Preference number: 1 (lower is better) Translates to: GGEIKANRKELQGIF*SISGQRQRLCKLTA Trigger: TGCTGTCAGCTTACATAATCTTTGTCTTTGCCCTGATATTGACCAGAATATACCTTGCAATTCTTTCCTGTTTGCTTTTATTTCTCCTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| 3UTR-3UTR TCA 90 bp | CCTCTCTTGACCCATGGTCTCAGAACAACAGTGAGAGTGACCTCTCTTCAAGGAAGCTCAGCTCTCAGATaGCTCTTGGCTGGTCTTGCA | + |
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Preference number: 2 (lower is better) Translates to: PLLTHGLRTTVRVTSLQGSSALR*LLAGLA Trigger: TGCAAGACCAGCCAAGAGTCATCTGAGAGCTGAGCT...TCCTTGAAGAGAGGTCACTCTCACTGTTGTTCTGAGACCATGGGTCAAGAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| 3UTR-3UTR CCA 90 bp | TTGCAAGGTATATTCTGGTCAATATCAGGGCAAAGACAAAGATTATGTAAGCTGCTCTCAGATGACTCTTaGCTGGTCTTGCAGTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: LQGIFWSISGQRQRLCKLLSDDS*LVLQWA Trigger: TGCCCACTGCAAGACCAGCCAAGAGTCATCTGAGAG...CAGCTTACATAATCTTTGTCTTTGCCCTGATATTGACCAGAATATACCTTGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| 3UTR-3UTR TCA 90 bp | TTGCAAGGTATATTCTGGTCAATATCAGGGCAAAGACAAAGATTATGTAAGCTGAGGAGTATGGAGGATTaGAGGCAGATGGTGTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: LQGIFWSISGQRQRLCKLRSMED*RQMVCV Trigger: CACACACACCATCTGCCTTCAATCCTCCATACTCCT...CAGCTTACATAATCTTTGTCTTTGCCCTGATATTGACCAGAATATACCTTGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| 3UTR CAA 90 bp | TCAGGGCAAAGACAAAGATTATGTAAGCTGACAGCATCTGTAAATTaGGTGCCCACTGAGACTGAGGTTGAAAAATTCAGGAAATTTAAT | + |
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Preference number: 2 (lower is better) Translates to: SGQRQRLCKLTASVN*VPTETEVEKFRKFN Trigger: ATTAAATTTCCTGAATTTTTCAACCTCAGTCTCAGTGGGCACCAAATTTACAGATGCTGTCAGCTTACATAATCTTTGTCTTTGCCCTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| 3UTR CCA 72 bp | ACCTCTCTTCAAGGAGTATGGAGGATTGAAGGCAGATaGTGTGTGTGTGTGAACTTCAGCAGAGCTCAGCTC | + |
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Preference number: 3 (lower is better) Translates to: TSLQGVWRIEGR*CVCVNFSRAQL Trigger: GAGCTGAGCTCTGCTGAAGTTCACACACACACACCATCTGCCTTCAATCCTCCATACTCCTTGAAGAGAGGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| 3UTR TCA 72 bp | AGTGAGAGTGACCTCTCTTCAAGGAGTATGGAGGATTaGAGGCAGATGGTGTGTGTGTGTGAACTTCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: SESDLSSRSMED*RQMVCVCELQQ Trigger: CTGCTGAAGTTCACACACACACACCATCTGCCTTCAATCCTCCATACTCCTTGAAGAGAGGTCACTCTCACT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| 3UTR CCA 72 bp | AGAACAACAGTGAGAGTGACCTCTCTTCAAGGAGTATaGAGGATTGAAGGCAGATGGTGTGTGTGTGTGAAC | + |
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Preference number: 3 (lower is better) Translates to: RTTVRVTSLQGV*RIEGRWCVCVN Trigger: GTTCACACACACACACCATCTGCCTTCAATCCTCCATACTCCTTGAAGAGAGGTCACTCTCACTGTTGTTCT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| 3UTR-3UTR CAA 90 bp | TTGCAAGGTATATTCTGGTCAATATCAGGGCAAAGACAAAGATTATGTAAGCTGACAGCATCTGTAAATTaGGTGCCCACTGAGACTGAG | + |
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Preference number: 3 (lower is better) Translates to: LQGIFWSISGQRQRLCKLTASVN*VPTETE Trigger: CTCAGTCTCAGTGGGCACCAAATTTACAGATGCTGT...CAGCTTACATAATCTTTGTCTTTGCCCTGATATTGACCAGAATATACCTTGCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS-3UTR TCA 90 bp | TGTGTGTGTGTGAACTTCAGCAGAGCTCAGCTCTCAGATGACTCTTGGCTGGTCAGCTTCTGGAAGGACTaGAATGTGGCATCAGTGCGG | + |
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Preference number: 4 (lower is better) Translates to: CVCVNFSRAQLSDDSWLVSFWKD*NVASVR Trigger: CCGCACTGATGCCACATTTCAGTCCTTCCAGAAGCT...GACCAGCCAAGAGTCATCTGAGAGCTGAGCTCTGCTGAAGTTCACACACACACA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS-3UTR TCA 90 bp | GGAGTATGGAGGATTGAAGGCAGATGGTGTGTGTGTGTGAACTTCAGCAGAGCTCTATGGGAGCTCCCTTaGCCTTATGGAGCTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: GVWRIEGRWCVCVNFSRALWELP*PYGAPP Trigger: TGGAGGAGCTCCATAAGGTCAAGGGAGCTCCCATAG...AGCTCTGCTGAAGTTCACACACACACACCATCTGCCTTCAATCCTCCATACTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGAACTTCAGCAGAGCTCAGCTCTCAGATGACTCTTGGCTGGTCCCTCCCCAACGCAGATaGGCTTTCCAGAGGAAAAGA | + |
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Preference number: 4 (lower is better) Translates to: CVCVNFSRAQLSDDSWLVPPQRR*AFQRKR Trigger: TCTTTTCCTCTGGAAAGCGCATCTGCGTTGGGGAGG...GACCAGCCAAGAGTCATCTGAGAGCTGAGCTCTGCTGAAGTTCACACACACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS-3UTR CCA 90 bp | TGGAGGATTGAAGGCAGATGGTGTGTGTGTGTGAACTTCAGCAGAGCTCAGCTCTGGTTAATCTCCTCGTaGATCTTGGCCTCCACCTCG | + |
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Preference number: 4 (lower is better) Translates to: WRIEGRWCVCVNFSRAQLWLISS*ILASTS Trigger: CGAGGTGGAGGCCAAGATCCACGAGGAGATTAACCA...GAGCTGAGCTCTGCTGAAGTTCACACACACACACCATCTGCCTTCAATCCTCCA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS-3UTR GCA 90 bp | CCTCTCTTGACCCATGGTCTCAGAACAACAGTGAGAGTGACCTCTCTTCAAGGAACTGTGCCCAGGGCTTaGTCATCTCCACAAAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: PLLTHGLRTTVRVTSLQGTVPRA*SSPQSS Trigger: AGAGCTTTGTGGAGATGAGCAAGCCCTGGGCACAGT...TCCTTGAAGAGAGGTCACTCTCACTGTTGTTCTGAGACCATGGGTCAAGAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS-3UTR TCA 90 bp | TGGAGGATTGAAGGCAGATGGTGTGTGTGTGTGAACTTCAGCAGAGCTCAGCTCGATGTTGCCAAAGCCTaGGATTTTGTGAGCGATGTC | + |
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Preference number: 4 (lower is better) Translates to: WRIEGRWCVCVNFSRAQLDVAKA*DFVSDV Trigger: GACATCGCTCACAAAATCTCAGGCTTTGGCAACATC...GAGCTGAGCTCTGCTGAAGTTCACACACACACACCATCTGCCTTCAATCCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGAACTTCAGCAGAGCTCAGCTCTCAGATGACTCTTGGCTGGTCAGGTTGAATTCTGTGTaGGGGTCACTTTTATCCTGG | + |
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Preference number: 4 (lower is better) Translates to: CVCVNFSRAQLSDDSWLVRLNSV*GSLLSW Trigger: CCAGGATAAAAGTGACCCGCACACAGAATTCAACCT...GACCAGCCAAGAGTCATCTGAGAGCTGAGCTCTGCTGAAGTTCACACACACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGAACTTCAGCAGAGCTCAGCTCTCAGATGACTCTTGGCTGGTCATCCATACCGTAACGTaGAACTCACAGTTTCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: CVCVNFSRAQLSDDSWLVIHTVT*NSQFLC Trigger: GCACAGAAACTGTGAGTTCCACGTTACGGTATGGAT...GACCAGCCAAGAGTCATCTGAGAGCTGAGCTCTGCTGAAGTTCACACACACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS-3UTR GCA 90 bp | TGGAGGATTGAAGGCAGATGGTGTGTGTGTGTGAACTTCAGCAGAGCTCAGCTCGCAAGACAAACAAAGTaGCATAAAGATGCTGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: WRIEGRWCVCVNFSRAQLARQTK*HKDAEG Trigger: GCCTTCAGCATCTTTATGGCACTTTGTTTGTCTTGC...GAGCTGAGCTCTGCTGAAGTTCACACACACACACCATCTGCCTTCAATCCTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS-3UTR GCA 90 bp | GCATCTGTAAATTTGGTGCCCACTGAGACTGAGGTTGAAAAATTCAGGAAATTTGCCACTGAAGTCATCTaGCTGGTCCACCAGGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: ASVNLVPTETEVEKFRKFATEVI*LVHQGL Trigger: GAGGCCCTGGTGGACCAGGCAGATGACTTCAGTGGC...AAATTTCCTGAATTTTTCAACCTCAGTCTCAGTGGGCACCAAATTTACAGATGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS-3UTR CCA 90 bp | TTTAATGAAACCCTCAGGCTTTTCCCCCAGATTGTGACTAGAACCCTAGTTTATCTGAAGTCATCTGCCTaGTCCACCAGGGCCTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: FNETLRLFPQIVTRTLVYLKSSA*STRASF Trigger: GAAGGAGGCCCTGGTGGACCAGGCAGATGACTTCAG...ATAAACTAGGGTTCTAGTCACAATCTGGGGGAAAAGCCTGAGGGTTTCATTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGAACTTCAGCAGAGCTCAGCTCTCAGATGACTCTTGGCTGGTCGGGTCACTTTTATCCTaGTGCATCTTGATGAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: CVCVNFSRAQLSDDSWLVGSLLS*CILMRK Trigger: CTTTCTCATCAAGATGCACCAGGATAAAAGTGACCC...GACCAGCCAAGAGTCATCTGAGAGCTGAGCTCTGCTGAAGTTCACACACACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS-3UTR TCA 90 bp | TGGAGGATTGAAGGCAGATGGTGTGTGTGTGTGAACTTCAGCAGAGCTCAGCTCTCTGAAGAATGGATGTaGAGTAAAGGAAGAGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: WRIEGRWCVCVNFSRAQLSEEWM*SKGRVP Trigger: TGGAACTCTTCCTTTACTTCACATCCATTCTTCAGA...GAGCTGAGCTCTGCTGAAGTTCACACACACACACCATCTGCCTTCAATCCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS-3UTR GCA 90 bp | CCTCTCTTGACCCATGGTCTCAGAACAACAGTGAGAGTGACCTCTCTTCAAGGAGATTTTGACCCTGGATaGAATGAAGTCCTTAAGGTC | + |
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Preference number: 4 (lower is better) Translates to: PLLTHGLRTTVRVTSLQGDFDPG*NEVLKV Trigger: GACCTTAAGGACTTCATTGCATCCAGGGTCAAAATC...TCCTTGAAGAGAGGTCACTCTCACTGTTGTTCTGAGACCATGGGTCAAGAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS-3UTR TCA 90 bp | TTGCAAGGTATATTCTGGTCAATATCAGGGCAAAGACAAAGATTATGTAAGCTGAGACCACGGAACAGATaGCGTTGGACACAGTGCGGC | + |
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Preference number: 4 (lower is better) Translates to: LQGIFWSISGQRQRLCKLRPRNR*RWTQCG Trigger: GCCGCACTGTGTCCAACGTCATCTGTTCCGTGGTCT...CAGCTTACATAATCTTTGTCTTTGCCCTGATATTGACCAGAATATACCTTGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS-3UTR TCA 90 bp | TGTGTGTGTGTGAACTTCAGCAGAGCTCAGCTCTCAGATGACTCTTGGCTGGTCCTGGAAAATACTGCATaGCTTTCCAGTACATATCAT | + |
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Preference number: 4 (lower is better) Translates to: CVCVNFSRAQLSDDSWLVLENTA*LSSTYH Trigger: ATGATATGTACTGGAAAGTCATGCAGTATTTTCCAG...GACCAGCCAAGAGTCATCTGAGAGCTGAGCTCTGCTGAAGTTCACACACACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS-3UTR TCA 90 bp | TTTAATGAAACCCTCAGGCTTTTCCCCCAGATTGTGACTAGAACCCTAGTTTATGAAGTCCCTAGGGTTTaGGGGGTCAAAGGATGCTTC | + |
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Preference number: 4 (lower is better) Translates to: FNETLRLFPQIVTRTLVYEVPRV*GVKGCF Trigger: GAAGCATCCTTTGACCCCTCAAACCCTAGGGACTTC...ATAAACTAGGGTTCTAGTCACAATCTGGGGGAAAAGCCTGAGGGTTTCATTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS-3UTR CCA 90 bp | TTTAATGAAACCCTCAGGCTTTTCCCCCAGATTGTGACTAGAACCCTAGTTTATGGCTCAGGTATAAGGTaGGATCTATGGGAGCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: FNETLRLFPQIVTRTLVYGSGIR*DLWELP Trigger: AGGGAGCTCCCATAGATCCCACCTTATACCTGAGCC...ATAAACTAGGGTTCTAGTCACAATCTGGGGGAAAAGCCTGAGGGTTTCATTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS-3UTR CCA 90 bp | TTTAATGAAACCCTCAGGCTTTTCCCCCAGATTGTGACTAGAACCCTAGTTTATGACAACCACTGGCCTTaGACCGAAGTACACAGTGAA | + |
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Preference number: 4 (lower is better) Translates to: FNETLRLFPQIVTRTLVYDNHWP*TEVHSE Trigger: TTCACTGTGTACTTCGGTCCAAGGCCAGTGGTTGTC...ATAAACTAGGGTTCTAGTCACAATCTGGGGGAAAAGCCTGAGGGTTTCATTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS-3UTR CCA 90 bp | CCTCTCTTGACCCATGGTCTCAGAACAACAGTGAGAGTGACCTCTCTTCAAGGAGTAGTTGTGTCTTCCTaGAAAATACTGCATGACTTT | + |
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Preference number: 4 (lower is better) Translates to: PLLTHGLRTTVRVTSLQGVVVSS*KILHDF Trigger: AAAGTCATGCAGTATTTTCCAGGAAGACACAACTAC...TCCTTGAAGAGAGGTCACTCTCACTGTTGTTCTGAGACCATGGGTCAAGAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS-3UTR CCA 90 bp | TTTAATGAAACCCTCAGGCTTTTCCCCCAGATTGTGACTAGAACCCTAGTTTATGGAAGGACTGAAATGTaGCATCAGTGCGGACTTGTA | + |
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Preference number: 4 (lower is better) Translates to: FNETLRLFPQIVTRTLVYGRTEM*HQCGLV Trigger: TACAAGTCCGCACTGATGCCACATTTCAGTCCTTCC...ATAAACTAGGGTTCTAGTCACAATCTGGGGGAAAAGCCTGAGGGTTTCATTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS-3UTR CCA 90 bp | GCAAACAGGAAAGAATTGCAAGGTATATTCTGGTCAATATCAGGGCAAAGACAAGCTTTCCTCCCTTACTaGTCCTCTTCCAAGCAATCA | + |
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Preference number: 4 (lower is better) Translates to: ANRKELQGIFWSISGQRQAFLPY*SSSKQS Trigger: TGATTGCTTGGAAGAGGACCAGTAAGGGAGGAAAGC...TTGTCTTTGCCCTGATATTGACCAGAATATACCTTGCAATTCTTTCCTGTTTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS-3UTR TCA 90 bp | TTGCAAGGTATATTCTGGTCAATATCAGGGCAAAGACAAAGATTATGTAAGCTGAAGCCTGAGATTTTGTaGGCGATGTCAATGTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: LQGIFWSISGQRQRLCKLKPEIL*AMSMSA Trigger: TGCTGACATTGACATCGCTCACAAAATCTCAGGCTT...CAGCTTACATAATCTTTGTCTTTGCCCTGATATTGACCAGAATATACCTTGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| 3UTR CAA 72 bp | AGACAAAGATTATGTAAGCTGACAGCATCTGTAAATTaGGTGCCCACTGAGACTGAGGTTGAAAAATTCAGG | + |
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Preference number: 4 (lower is better) Translates to: RQRLCKLTASVN*VPTETEVEKFR Trigger: CCTGAATTTTTCAACCTCAGTCTCAGTGGGCACCAAATTTACAGATGCTGTCAGCTTACATAATCTTTGTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS-3UTR GCA 90 bp | TTTAATGAAACCCTCAGGCTTTTCCCCCAGATTGTGACTAGAACCCTAGTTTATTCACTTTTATCCTGGTaGATCTTGATGAGAAAGCAA | + |
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Preference number: 4 (lower is better) Translates to: FNETLRLFPQIVTRTLVYSLLSW*ILMRKQ Trigger: TTGCTTTCTCATCAAGATGCACCAGGATAAAAGTGA...ATAAACTAGGGTTCTAGTCACAATCTGGGGGAAAAGCCTGAGGGTTTCATTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS-3UTR GCA 90 bp | GCATCTGTAAATTTGGTGCCCACTGAGACTGAGGTTGAAAAATTCAGGAAATTTCTTCCTGGAAAATACTaGATGACTTTCCAGTACATA | + |
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Preference number: 4 (lower is better) Translates to: ASVNLVPTETEVEKFRKFLPGKY*MTFQYI Trigger: TATGTACTGGAAAGTCATGCAGTATTTTCCAGGAAG...AAATTTCCTGAATTTTTCAACCTCAGTCTCAGTGGGCACCAAATTTACAGATGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS-3UTR CAA 90 bp | TGTGTGTGTGTGAACTTCAGCAGAGCTCAGCTCTCAGATGACTCTTGGCTGGTCAAGGCATCATTCTTCTaGAAGCGCCCCTGTTCATCC | + |
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Preference number: 5 (lower is better) Translates to: CVCVNFSRAQLSDDSWLVKASFF*KRPCSS Trigger: GGATGAACAGGGGCGCTTCAAGAAGAATGATGCCTT...GACCAGCCAAGAGTCATCTGAGAGCTGAGCTCTGCTGAAGTTCACACACACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS-3UTR CAA 90 bp | TGTGTGTGTGTGAACTTCAGCAGAGCTCAGCTCTCAGATGACTCTTGGCTGGTCTCAAAGGATGCTTCATaGATTTTGACCCTGGATGCA | + |
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Preference number: 5 (lower is better) Translates to: CVCVNFSRAQLSDDSWLVSKDAS*ILTLDA Trigger: TGCATCCAGGGTCAAAATCAATGAAGCATCCTTTGA...GACCAGCCAAGAGTCATCTGAGAGCTGAGCTCTGCTGAAGTTCACACACACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS-3UTR CAA 90 bp | CCTCTCTTGACCCATGGTCTCAGAACAACAGTGAGAGTGACCTCTCTTCAAGGAGTGAGAACCAAGTTCTaGAGGTTGAATTCTGTGTGC | + |
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Preference number: 5 (lower is better) Translates to: PLLTHGLRTTVRVTSLQGVRTKF*RLNSVC Trigger: GCACACAGAATTCAACCTCAAGAACTTGGTTCTCAC...TCCTTGAAGAGAGGTCACTCTCACTGTTGTTCTGAGACCATGGGTCAAGAGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS TCA 90 bp | CTGGTGCATCTTGATGAGAAAGCAATCTATGAAGTCCCTAGGGTTTaGGGGGTCAAAGGATGCTTCATTGATTTTGACCCTGGATGCAAT | + |
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Preference number: 5 (lower is better) Translates to: LVHLDEKAIYEVPRV*GVKGCFIDFDPGCN Trigger: ATTGCATCCAGGGTCAAAATCAATGAAGCATCCTTTGACCCCTCAAACCCTAGGGACTTCATAGATTGCTTTCTCATCAAGATGCACCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS-3UTR CAA 90 bp | CTCTTGACCCATGGTCTCAGAACAACAGTGAGAGTGACCTCTCTTCAAGGAGTATTATCCTGGTGCATCTaGATGAGAAAGCAATCTATG | + |
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Preference number: 5 (lower is better) Translates to: LLTHGLRTTVRVTSLQGVLSWCI*MRKQSM Trigger: CATAGATTGCTTTCTCATCAAGATGCACCAGGATAA...TACTCCTTGAAGAGAGGTCACTCTCACTGTTGTTCTGAGACCATGGGTCAAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS-3UTR CAA 90 bp | TTTAATGAAACCCTCAGGCTTTTCCCCCAGATTGTGACTAGAACCCTAGTTTATACCAAGTTCTTGAGGTaGAATTCTGTGTGCGGGTCA | + |
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Preference number: 5 (lower is better) Translates to: FNETLRLFPQIVTRTLVYTKFLR*NSVCGS Trigger: TGACCCGCACACAGAATTCAACCTCAAGAACTTGGT...ATAAACTAGGGTTCTAGTCACAATCTGGGGGAAAAGCCTGAGGGTTTCATTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS TCA 90 bp | CTATCAAGTTGTAGAGGTAGTTGTGTCTTCCTGGAAAATACTGCATaGCTTTCCAGTACATATCATATAACTGTGCCCAGGGCTTGCTCA | + |
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Preference number: 5 (lower is better) Translates to: LSSCRGSCVFLENTA*LSSTYHITVPRACS Trigger: TGAGCAAGCCCTGGGCACAGTTATATGATATGTACTGGAAAGTCATGCAGTATTTTCCAGGAAGACACAACTACCTCTACAACTTGATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS-3UTR CAA 90 bp | TTGCAAGGTATATTCTGGTCAATATCAGGGCAAAGACAAAGATTATGTAAGCTGTCCACAAAGCTCTCATaGATCATCCTCATGAGGCTC | + |
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Preference number: 5 (lower is better) Translates to: LQGIFWSISGQRQRLCKLSTKLS*IILMRL Trigger: GAGCCTCATGAGGATGATCAATGAGAGCTTTGTGGA...CAGCTTACATAATCTTTGTCTTTGCCCTGATATTGACCAGAATATACCTTGCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS-3UTR CAA 90 bp | GCAAACAGGAAAGAATTGCAAGGTATATTCTGGTCAATATCAGGGCAAAGACAATTCATCCAGGAAGTGTaGAGGATAAAAAGCATCTGG | + |
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Preference number: 5 (lower is better) Translates to: ANRKELQGIFWSISGQRQFIQEV*RIKSIW Trigger: CCAGATGCTTTTTATCCTCAACACTTCCTGGATGAA...TTGTCTTTGCCCTGATATTGACCAGAATATACCTTGCAATTCTTTCCTGTTTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS CCA 72 bp | TCATCCACTCTTGGGGTACGGTGTGTTCCGATCACCTaGTTAATCTCCTCGTGGATCTTGGCCTCCACCTCG | + |
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Preference number: 6 (lower is better) Translates to: SSTLGVRCVPIT*LISSWILASTS Trigger: CGAGGTGGAGGCCAAGATCCACGAGGAGATTAACCAGGTGATCGGAACACACCGTACCCCAAGAGTGGATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS CAA 72 bp | TGTGCCCAGGGCTTGCTCATCTCCACAAAGCTCTCATaGATCATCCTCATGAGGCTCTGGAAACGCTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: CAQGLLISTKLS*IILMRLWKRWS Trigger: GGACCAGCGTTTCCAGAGCCTCATGAGGATGATCAATGAGAGCTTTGTGGAGATGAGCAAGCCCTGGGCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS CAA 72 bp | AAGTCCCTAGGGTTTGAGGGGTCAAAGGATGCTTCATaGATTTTGACCCTGGATGCAATGAAGTCCTTAAGG | + |
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Preference number: 6 (lower is better) Translates to: KSLGFEGSKDAS*ILTLDAMKSLR Trigger: CCTTAAGGACTTCATTGCATCCAGGGTCAAAATCAATGAAGCATCCTTTGACCCCTCAAACCCTAGGGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS CAA 72 bp | CTAGGGTTTGAGGGGTCAAAGGATGCTTCATTGATTTaGACCCTGGATGCAATGAAGTCCTTAAGGTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: LGFEGSKDASLI*TLDAMKSLRSS Trigger: AGAAGACCTTAAGGACTTCATTGCATCCAGGGTCAAAATCAATGAAGCATCCTTTGACCCCTCAAACCCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS CAA 90 bp | ATGAAGTCCCTAGGGTTTGAGGGGTCAAAGGATGCTTCATTGATTTaGACCCTGGATGCAATGAAGTCCTTAAGGTCTTCTATCAAGTTG | + |
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Preference number: 6 (lower is better) Translates to: MKSLGFEGSKDASLI*TLDAMKSLRSSIKL Trigger: CAACTTGATAGAAGACCTTAAGGACTTCATTGCATCCAGGGTCAAAATCAATGAAGCATCCTTTGACCCCTCAAACCCTAGGGACTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS CAA 90 bp | CAATCTATGAAGTCCCTAGGGTTTGAGGGGTCAAAGGATGCTTCATaGATTTTGACCCTGGATGCAATGAAGTCCTTAAGGTCTTCTATC | + |
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Preference number: 6 (lower is better) Translates to: QSMKSLGFEGSKDAS*ILTLDAMKSLRSSI Trigger: GATAGAAGACCTTAAGGACTTCATTGCATCCAGGGTCAAAATCAATGAAGCATCCTTTGACCCCTCAAACCCTAGGGACTTCATAGATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS TCA 72 bp | CTTGATGAGAAAGCAATCTATGAAGTCCCTAGGGTTTaGGGGGTCAAAGGATGCTTCATTGATTTTGACCCT | + |
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Preference number: 6 (lower is better) Translates to: LDEKAIYEVPRV*GVKGCFIDFDP Trigger: AGGGTCAAAATCAATGAAGCATCCTTTGACCCCTCAAACCCTAGGGACTTCATAGATTGCTTTCTCATCAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS CAA 72 bp | AATTCTGTGTGCGGGTCACTTTTATCCTGGTGCATCTaGATGAGAAAGCAATCTATGAAGTCCCTAGGGTTT | + |
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Preference number: 6 (lower is better) Translates to: NSVCGSLLSWCI*MRKQSMKSLGF Trigger: AAACCCTAGGGACTTCATAGATTGCTTTCTCATCAAGATGCACCAGGATAAAAGTGACCCGCACACAGAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS GCA 72 bp | GGGGTCAAAGGATGCTTCATTGATTTTGACCCTGGATaGAATGAAGTCCTTAAGGTCTTCTATCAAGTTGTA | + |
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Preference number: 6 (lower is better) Translates to: GVKGCFIDFDPG*NEVLKVFYQVV Trigger: TACAACTTGATAGAAGACCTTAAGGACTTCATTGCATCCAGGGTCAAAATCAATGAAGCATCCTTTGACCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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| CDS CCA 72 bp | GTCTTCTATCAAGTTGTAGAGGTAGTTGTGTCTTCCTaGAAAATACTGCATGACTTTCCAGTACATATCATA | + |
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Preference number: 6 (lower is better) Translates to: VFYQVVEVVVSS*KILHDFPVHII Trigger: TATGATATGTACTGGAAAGTCATGCAGTATTTTCCAGGAAGACACAACTACCTCTACAACTTGATAGAAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040944.9 |
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