Pregenerated sensors for CYP2F2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052974Ensembl transcript IDs: ENSMUST00000003100.10, ENSMUST00000206552.2
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | CATGAAGATGGGCTTAAGATAGGCGGGGTAAAGTACTaGTACGTGGCAGGCCCAGGGTTAAGGGAAGATCAT | + |
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Preference number: 3 (lower is better) Translates to: HEDGLKIGGVKY*YVAGPGLREDH Trigger: ATGATCTTCCCTTAACCCTGGGCCTGCCACGTATCAGTACTTTACCCCGCCTATCTTAAGCCCATCTTCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS-3UTR CCA 90 bp | GAGGCCTATGACAGTGAACCCCAACTGGAAGAAGGACAGGGGTCCCTGGGCGCAGGTCCTGGAGGCAGCTaGCCCTTGCCCCGTGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: EAYDSEPQLEEGQGSLGAGPGGS*PLPREL Trigger: CAGCTCACGGGGCAAGGGCCAGCTGCCTCCAGGACC...TGCGCCCAGGGACCCCTGTCCTTCTTCCAGTTGGGGTTCACTGTCATAGGCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS-3UTR CCA 90 bp | GCCTATGACAGTGAACCCCAACTGGAAGAAGGACAGGGGTCCCTGGGCGCAGTAGGGTCCAGGGAATCCTaGTGTTCGCGGACGCTGCGG | + |
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Preference number: 4 (lower is better) Translates to: AYDSEPQLEEGQGSLGAVGSRES*CSRTLR Trigger: CCGCAGCGTCCGCGAACACCAGGATTCCCTGGACCC...TACTGCGCCCAGGGACCCCTGTCCTTCTTCCAGTTGGGGTTCACTGTCATAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS-3UTR CCA 90 bp | GCCTATGACAGTGAACCCCAACTGGAAGAAGGACAGGGGTCCCTGGGCGCAGTAGAGAGGTTTGGGTCCTaGAGGCAGCTGGCCCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: AYDSEPQLEEGQGSLGAVERFGS*RQLALA Trigger: GGCAAGGGCCAGCTGCCTCCAGGACCCAAACCTCTC...TACTGCGCCCAGGGACCCCTGTCCTTCTTCCAGTTGGGGTTCACTGTCATAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS-3UTR TCA 90 bp | GCCTATGACAGTGAACCCCAACTGGAAGAAGGACAGGGGTCCCTGGGCGCAGTAGGACAGAGAACCTTCTaGGGATCTTCCAGCGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: AYDSEPQLEEGQGSLGAVGQRTF*GSSSAL Trigger: GAGAGCGCTGGAAGATCCTCAGAAGGTTCTCTGTCC...TACTGCGCCCAGGGACCCCTGTCCTTCTTCCAGTTGGGGTTCACTGTCATAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS-3UTR CCA 90 bp | GAGGCCTATGACAGTGAACCCCAACTGGAAGAAGGACAGGGGTCCCTGGGCGCAGCCTCCTTCACAGTTTaGTATCCGCTGAGGACTATC | + |
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Preference number: 4 (lower is better) Translates to: EAYDSEPQLEEGQGSLGAASFTV*YPLRTI Trigger: GATAGTCCTCAGCGGATACCAAACTGTGAAGGAGGC...TGCGCCCAGGGACCCCTGTCCTTCTTCCAGTTGGGGTTCACTGTCATAGGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS-3UTR CCA 90 bp | GAGGCCTATGACAGTGAACCCCAACTGGAAGAAGGACAGGGGTCCCTGGGCGCACATCTGTGTAAGGCATaGATGTACGGTCTTCCAGCG | + |
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Preference number: 4 (lower is better) Translates to: EAYDSEPQLEEGQGSLGAHLCKA*MYGLPA Trigger: CGCTGGAAGACCGTACATCCATGCCTTACACAGATG...TGCGCCCAGGGACCCCTGTCCTTCTTCCAGTTGGGGTTCACTGTCATAGGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS-3UTR CCA 90 bp | GAGGCCTATGACAGTGAACCCCAACTGGAAGAAGGACAGGGGTCCCTGGGCGCAAAGTTCCGCAGGATTTaGACAGAGAACCTTCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: EAYDSEPQLEEGQGSLGAKFRRI*TENLLR Trigger: CCTCAGAAGGTTCTCTGTCCAAATCCTGCGGAACTT...TGCGCCCAGGGACCCCTGTCCTTCTTCCAGTTGGGGTTCACTGTCATAGGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS-3UTR GCA 90 bp | ATATCAATGGAGGCCTATGACAGTGAACCCCAACTGGAAGAAGGACAGGGGTCCCCTCCAGCAGGAAGCTaGCTTCTTCCAGGATCCGCT | + |
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Preference number: 4 (lower is better) Translates to: ISMEAYDSEPQLEEGQGSPPAGS*LLPGSA Trigger: AGCGGATCCTGGAAGAAGGCAGCTTCCTGCTGGAGG...GGACCCCTGTCCTTCTTCCAGTTGGGGTTCACTGTCATAGGCCTCCATTGATAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS-3UTR CCA 90 bp | GAGGCCTATGACAGTGAACCCCAACTGGAAGAAGGACAGGGGTCCCTGGGCGCAGTATCCATATTGAAGTaGCTCAGTGGGTCTTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: EAYDSEPQLEEGQGSLGAVSILK*LSGSCF Trigger: GAAGCAAGACCCACTGAGCCACTTCAATATGGATAC...TGCGCCCAGGGACCCCTGTCCTTCTTCCAGTTGGGGTTCACTGTCATAGGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS-3UTR CCA 90 bp | GAGGCCTATGACAGTGAACCCCAACTGGAAGAAGGACAGGGGTCCCTGGGCGCAATGTGCATACACAGCTaGAAAGGCCTTGGCAAATTG | + |
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Preference number: 4 (lower is better) Translates to: EAYDSEPQLEEGQGSLGAMCIHS*KGLGKL Trigger: CAATTTGCCAAGGCCTTTCCAGCTGTGTATGCACAT...TGCGCCCAGGGACCCCTGTCCTTCTTCCAGTTGGGGTTCACTGTCATAGGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS-3UTR GCA 90 bp | ATATCAATGGAGGCCTATGACAGTGAACCCCAACTGGAAGAAGGACAGGGGTCCCGGGGTCAAAGGGCTTaGCTTCCATTTTCCTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: ISMEAYDSEPQLEEGQGSRGQRA*LPFSSA Trigger: TGCTGAGGAAAATGGAAGGCAAGCCCTTTGACCCCG...GGACCCCTGTCCTTCTTCCAGTTGGGGTTCACTGTCATAGGCCTCCATTGATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS-3UTR TCA 90 bp | CCAGGGTTAAGGGAAGATCATGTGAGAGAGATATCAATGGAGGCCTATGACAGTAGAATAAGGAAGGCGTaGCGCAGTGTGGTGCCCACG | + |
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Preference number: 4 (lower is better) Translates to: PGLREDHVREISMEAYDSRIRKA*RSVVPT Trigger: CGTGGGCACCACACTGCGTCACGCCTTCCTTATTCT...ACTGTCATAGGCCTCCATTGATATCTCTCTCACATGATCTTCCCTTAACCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS-3UTR CCA 90 bp | GGGTTAAGGGAAGATCATGTGAGAGAGATATCAATGGAGGCCTATGACAGTGAAAGTCCCGGGGAGAGTTaGGGTCCAGGGAATCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: GLREDHVREISMEAYDSESPGES*GPGNPG Trigger: ACCAGGATTCCCTGGACCCCAACTCTCCCCGGGACT...TTCACTGTCATAGGCCTCCATTGATATCTCTCTCACATGATCTTCCCTTAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS-3UTR TCA 90 bp | GGGTTAAGGGAAGATCATGTGAGAGAGATATCAATGGAGGCCTATGACAGTGAACCAGCGGCTGCAATGTaGAGTTCTGCAGAATGGAGG | + |
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Preference number: 4 (lower is better) Translates to: GLREDHVREISMEAYDSEPAAAM*SSAEWR Trigger: CCTCCATTCTGCAGAACTTCACATTGCAGCCGCTGG...TTCACTGTCATAGGCCTCCATTGATATCTCTCTCACATGATCTTCCCTTAACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS-3UTR GCA 90 bp | CCAGGGTTAAGGGAAGATCATGTGAGAGAGATATCAATGGAGGCCTATGACAGTTCTTGGGAGCGAAGCTaGAGCAGGTTTCCCAGGATT | + |
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Preference number: 4 (lower is better) Translates to: PGLREDHVREISMEAYDSSWERS*SRFPRI Trigger: AATCCTGGGAAACCTGCTGCAGCTTCGCTCCCAAGA...ACTGTCATAGGCCTCCATTGATATCTCTCTCACATGATCTTCCCTTAACCCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS-3UTR GCA 90 bp | CCAGGGTTAAGGGAAGATCATGTGAGAGAGATATCAATGGAGGCCTATGACAGTTGGCTCAGTGGGTCTTaGTTCTCCTGTGCCATCTTT | + |
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Preference number: 4 (lower is better) Translates to: PGLREDHVREISMEAYDSWLSGS*FSCAIF Trigger: AAAGATGGCACAGGAGAAGCAAGACCCACTGAGCCA...ACTGTCATAGGCCTCCATTGATATCTCTCTCACATGATCTTCCCTTAACCCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS-3UTR CCA 90 bp | GGGTTAAGGGAAGATCATGTGAGAGAGATATCAATGGAGGCCTATGACAGTGAAGGAGGAGAAGCAAGATaGCTGTGCTCACACCATCCA | + |
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Preference number: 4 (lower is better) Translates to: GLREDHVREISMEAYDSEGGEAR*LCSHHP Trigger: TGGATGGTGTGAGCACAGCCATCTTGCTTCTCCTCC...TTCACTGTCATAGGCCTCCATTGATATCTCTCTCACATGATCTTCCCTTAACCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS-3UTR CCA 90 bp | AGGGAAGATCATGTGAGAGAGATATCAATGGAGGCCTATGACAGTGAACCCCAAATTGAAGTGGCTCAGTaGGTCTTGCTTCTCCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: REDHVREISMEAYDSEPQIEVAQ*VLLLLC Trigger: GCACAGGAGAAGCAAGACCCACTGAGCCACTTCAAT...TTGGGGTTCACTGTCATAGGCCTCCATTGATATCTCTCTCACATGATCTTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS-3UTR GCA 90 bp | CCAGGGTTAAGGGAAGATCATGTGAGAGAGATATCAATGGAGGCCTATGACAGTGTCTTGCTTCTCCTGTaGCATCTTTGTGAGGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: PGLREDHVREISMEAYDSVLLLL*HLCEEA Trigger: TGCTTCCTCACAAAGATGGCACAGGAGAAGCAAGAC...ACTGTCATAGGCCTCCATTGATATCTCTCTCACATGATCTTCCCTTAACCCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS-3UTR TCA 90 bp | GGGTTAAGGGAAGATCATGTGAGAGAGATATCAATGGAGGCCTATGACAGTGAAAGGCGGGGCTCTTTTTaGAAGAATGATTGTCGTCCA | + |
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Preference number: 4 (lower is better) Translates to: GLREDHVREISMEAYDSERRGSF*KNDCRP Trigger: TGGACGACAATCATTCTTTCAAAAAGAGCCCCGCCT...TTCACTGTCATAGGCCTCCATTGATATCTCTCTCACATGATCTTCCCTTAACCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS-3UTR GCA 90 bp | AGGGAAGATCATGTGAGAGAGATATCAATGGAGGCCTATGACAGTGAACCCCAATGCAATGTGAAGTTCTaGAGAATGGAGGTGAAGTAT | + |
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Preference number: 4 (lower is better) Translates to: REDHVREISMEAYDSEPQCNVKF*RMEVKY Trigger: ATACTTCACCTCCATTCTGCAGAACTTCACATTGCA...TTGGGGTTCACTGTCATAGGCCTCCATTGATATCTCTCTCACATGATCTTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS GCA 90 bp | TTGCTAAGCTTGGTGAGGGAGGTCAGCAAGTCTTGGGAGCGAAGCTaGAGCAGGTTTCCCAGGATTGGGAGAGGTTTGGGTCCTGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: LLSLVREVSKSWERS*SRFPRIGRGLGPGG Trigger: GCCTCCAGGACCCAAACCTCTCCCAATCCTGGGAAACCTGCTGCAGCTTCGCTCCCAAGACTTGCTGACCTCCCTCACCAAGCTTAGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS-3UTR CAA 90 bp | GAGGCCTATGACAGTGAACCCCAACTGGAAGAAGGACAGGGGTCCCTGGGCGCAAGCCTCCTTCACAGTTaGGTATCCGCTGAGGACTAT | + |
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Preference number: 5 (lower is better) Translates to: EAYDSEPQLEEGQGSLGASLLHS*VSAEDY Trigger: ATAGTCCTCAGCGGATACCAAACTGTGAAGGAGGCT...TGCGCCCAGGGACCCCTGTCCTTCTTCCAGTTGGGGTTCACTGTCATAGGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS CCA 90 bp | GACCCATACTCCTTGCTAAGCTTGGTGAGGGAGGTCAGCAAGTCTTaGGAGCGAAGCTGCAGCAGGTTTCCCAGGATTGGGAGAGGTTTG | + |
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Preference number: 5 (lower is better) Translates to: DPYSLLSLVREVSKS*ERSCSRFPRIGRGL Trigger: CAAACCTCTCCCAATCCTGGGAAACCTGCTGCAGCTTCGCTCCCAAGACTTGCTGACCTCCCTCACCAAGCTTAGCAAGGAGTATGGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS-3UTR CAA 90 bp | AGGGAAGATCATGTGAGAGAGATATCAATGGAGGCCTATGACAGTGAACCCCAAGGAGGCAGCTGGCCCTaGCCCCGTGAGCTGAAGGTC | + |
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Preference number: 5 (lower is better) Translates to: REDHVREISMEAYDSEPQGGSWP*PRELKV Trigger: GACCTTCAGCTCACGGGGCAAGGGCCAGCTGCCTCC...TTGGGGTTCACTGTCATAGGCCTCCATTGATATCTCTCTCACATGATCTTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS TCA 90 bp | TTTTTCCCATGCCAAAGTTCCGCAGGATTTGGACAGAGAACCTTCTaGGGATCTTCCAGCGCTCTCCATCGGAGAAGGCGATGCCGTTGC | + |
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Preference number: 5 (lower is better) Translates to: FFPCQSSAGFGQRTF*GSSSALHRRRRCRC Trigger: GCAACGGCATCGCCTTCTCCGATGGAGAGCGCTGGAAGATCCTCAGAAGGTTCTCTGTCCAAATCCTGCGGAACTTTGGCATGGGAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003100.10 ENSMUST00000206552.2 |
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| CDS-3UTR CAA 90 bp | ATATCAATGGAGGCCTATGACAGTGAACCCCAACTGGAAGAAGGACAGGGGTCCACGGGGTCAAAGGGCTaGCCTTCCATTTTCCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: ISMEAYDSEPQLEEGQGSTGSKG*PSIFLS Trigger: GCTGAGGAAAATGGAAGGCAAGCCCTTTGACCCCGT...GGACCCCTGTCCTTCTTCCAGTTGGGGTTCACTGTCATAGGCCTCCATTGATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS-3UTR CAA 90 bp | AGGGAAGATCATGTGAGAGAGATATCAATGGAGGCCTATGACAGTGAACCCCAAGGAGGTCAGCAAGTCTaGGGAGCGAAGCTGCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: REDHVREISMEAYDSEPQGGQQV*GAKLQQ Trigger: CTGCTGCAGCTTCGCTCCCAAGACTTGCTGACCTCC...TTGGGGTTCACTGTCATAGGCCTCCATTGATATCTCTCTCACATGATCTTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS-3UTR CAA 90 bp | GGGTTAAGGGAAGATCATGTGAGAGAGATATCAATGGAGGCCTATGACAGTGAAAGGATTGGGAGAGGTTaGGGTCCTGGAGGCAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: GLREDHVREISMEAYDSERIGRG*GPGGSW Trigger: CCAGCTGCCTCCAGGACCCAAACCTCTCCCAATCCT...TTCACTGTCATAGGCCTCCATTGATATCTCTCTCACATGATCTTCCCTTAACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS-3UTR CAA 90 bp | AGGGAAGATCATGTGAGAGAGATATCAATGGAGGCCTATGACAGTGAACCCCAAATGACATCTGTGCCCTaGGGTATCAGGAAGCCCCGG | + |
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Preference number: 5 (lower is better) Translates to: REDHVREISMEAYDSEPQMTSVP*GIRKPR Trigger: CCGGGGCTTCCTGATACCCAAGGGCACAGATGTCAT...TTGGGGTTCACTGTCATAGGCCTCCATTGATATCTCTCTCACATGATCTTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS-3UTR CAA 90 bp | AGGGAAGATCATGTGAGAGAGATATCAATGGAGGCCTATGACAGTGAACCCCAAGTGGCTCAGTGGGTCTaGCTTCTCCTGTGCCATCTT | + |
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Preference number: 5 (lower is better) Translates to: REDHVREISMEAYDSEPQVAQWV*LLLCHL Trigger: AAGATGGCACAGGAGAAGCAAGACCCACTGAGCCAC...TTGGGGTTCACTGTCATAGGCCTCCATTGATATCTCTCTCACATGATCTTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS-3UTR CAA 90 bp | GGGTTAAGGGAAGATCATGTGAGAGAGATATCAATGGAGGCCTATGACAGTGAAGAGAAGGCGATGCCGTaGCCCCTGGTGAAGTTGAAA | + |
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Preference number: 5 (lower is better) Translates to: GLREDHVREISMEAYDSEEKAMP*PLVKLK Trigger: TTTCAACTTCACCAGGGGCAACGGCATCGCCTTCTC...TTCACTGTCATAGGCCTCCATTGATATCTCTCTCACATGATCTTCCCTTAACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS-3UTR CAA 90 bp | AGGGAAGATCATGTGAGAGAGATATCAATGGAGGCCTATGACAGTGAACCCCAAAAAGTTCCGCAGGATTaGGACAGAGAACCTTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: REDHVREISMEAYDSEPQKVPQD*DREPSE Trigger: CTCAGAAGGTTCTCTGTCCAAATCCTGCGGAACTTT...TTGGGGTTCACTGTCATAGGCCTCCATTGATATCTCTCTCACATGATCTTCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS CCA 90 bp | AATGAGATCTTTCATGCCTCCAAAGTTCCGGAACAAGCGTTTGTGTaGCCCAGGTATCCAATCAAGGACACTTGGGAAGATGTTGTACAT | + |
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Preference number: 5 (lower is better) Translates to: NEIFHASKVPEQAFV*PRYPIKDTWEDVVH Trigger: ATGTACAACATCTTCCCAAGTGTCCTTGATTGGATACCTGGGCCACACAAACGCTTGTTCCGGAACTTTGGAGGCATGAAAGATCTCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS CCA 72 bp | CCCAGGATTGGGAGAGGTTTGGGTCCTGGAGGCAGCTaGCCCTTGCCCCGTGAGCTGAAGGTCAGGGACAGA | + |
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Preference number: 6 (lower is better) Translates to: PRIGRGLGPGGS*PLPRELKVRDR Trigger: TCTGTCCCTGACCTTCAGCTCACGGGGCAAGGGCCAGCTGCCTCCAGGACCCAAACCTCTCCCAATCCTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS TCA 72 bp | AGGTTTGGGTCCTGGAGGCAGCTGGCCCTTGCCCCGTaGGCTGAAGGTCAGGGACAGAGAGATGACAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: RFGSWRQLALAP*AEGQGQRDDSQ Trigger: CTGGCTGTCATCTCTCTGTCCCTGACCTTCAGCTCACGGGGCAAGGGCCAGCTGCCTCCAGGACCCAAACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS CAA 90 bp | TTTCCCAGGATTGGGAGAGGTTTGGGTCCTGGAGGCAGCTGGCCCTaGCCCCGTGAGCTGAAGGTCAGGGACAGAGAGATGACAGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: FPRIGRGLGPGGSWP*PRELKVRDREMTAR Trigger: CCTGGCTGTCATCTCTCTGTCCCTGACCTTCAGCTCACGGGGCAAGGGCCAGCTGCCTCCAGGACCCAAACCTCTCCCAATCCTGGGAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS CAA 72 bp | ATTGGGAGAGGTTTGGGTCCTGGAGGCAGCTGGCCCTaGCCCCGTGAGCTGAAGGTCAGGGACAGAGAGATG | + |
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Preference number: 6 (lower is better) Translates to: IGRGLGPGGSWP*PRELKVRDREM Trigger: CATCTCTCTGTCCCTGACCTTCAGCTCACGGGGCAAGGGCCAGCTGCCTCCAGGACCCAAACCTCTCCCAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS CAA 90 bp | ACAGGCCTGGACCCCAGGTACACCGTGAACACCGACCCATACTCCTaGCTAAGCTTGGTGAGGGAGGTCAGCAAGTCTTGGGAGCGAAGC | + |
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Preference number: 6 (lower is better) Translates to: TGLDPRYTVNTDPYS*LSLVREVSKSWERS Trigger: GCTTCGCTCCCAAGACTTGCTGACCTCCCTCACCAAGCTTAGCAAGGAGTATGGGTCGGTGTTCACGGTGTACCTGGGGTCCAGGCCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS CAA 90 bp | CCGCGAGCGCCCCACCACACGGTCAATCTCTTCCTGCACGCGGGCTaGCACTTTGGGGTATTTCATAAGAATAAGGAAGGCGTGACGCAG | + |
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Preference number: 6 (lower is better) Translates to: PRAPHHTVNLFLHAG*HFGVFHKNKEGVTQ Trigger: CTGCGTCACGCCTTCCTTATTCTTATGAAATACCCCAAAGTGCAAGCCCGCGTGCAGGAAGAGATTGACCGTGTGGTGGGGCGCTCGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003100.10 ENSMUST00000206552.2 |
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| CDS GCA 72 bp | TTGGTGAGGGAGGTCAGCAAGTCTTGGGAGCGAAGCTaGAGCAGGTTTCCCAGGATTGGGAGAGGTTTGGGT | + |
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Preference number: 6 (lower is better) Translates to: LVREVSKSWERS*SRFPRIGRGLG Trigger: ACCCAAACCTCTCCCAATCCTGGGAAACCTGCTGCAGCTTCGCTCCCAAGACTTGCTGACCTCCCTCACCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS GCA 72 bp | ATCCGCGAGCGCCCCACCACACGGTCAATCTCTTCCTaGACGCGGGCTTGCACTTTGGGGTATTTCATAAGA | + |
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Preference number: 6 (lower is better) Translates to: IRERPTTRSISS*TRACTLGYFIR Trigger: TCTTATGAAATACCCCAAAGTGCAAGCCCGCGTGCAGGAAGAGATTGACCGTGTGGTGGGGCGCTCGCGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003100.10 ENSMUST00000206552.2 |
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| CDS CAA 72 bp | GACCCCAGGTACACCGTGAACACCGACCCATACTCCTaGCTAAGCTTGGTGAGGGAGGTCAGCAAGTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: DPRYTVNTDPYS*LSLVREVSKSW Trigger: CCAAGACTTGCTGACCTCCCTCACCAAGCTTAGCAAGGAGTATGGGTCGGTGTTCACGGTGTACCTGGGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS CAA 72 bp | CTCCTCCCCTTTGTCCACAAGAGCCTCCTTCACAGTTaGGTATCCGCTGAGGACTATCACAGGCCTGGACCC | + |
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Preference number: 6 (lower is better) Translates to: LLPFVHKSLLHS*VSAEDYHRPGP Trigger: GGGTCCAGGCCTGTGATAGTCCTCAGCGGATACCAAACTGTGAAGGAGGCTCTTGTGGACAAAGGGGAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS TCA 72 bp | TGCCAAAGTTCCGCAGGATTTGGACAGAGAACCTTCTaGGGATCTTCCAGCGCTCTCCATCGGAGAAGGCGA | + |
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Preference number: 6 (lower is better) Translates to: CQSSAGFGQRTF*GSSSALHRRRR Trigger: TCGCCTTCTCCGATGGAGAGCGCTGGAAGATCCTCAGAAGGTTCTCTGTCCAAATCCTGCGGAACTTTGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003100.10 ENSMUST00000206552.2 |
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| CDS CCA 72 bp | GCGTTTGTGTGGCCCAGGTATCCAATCAAGGACACTTaGGAAGATGTTGTACATCTCGCCCCAAGGGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: AFVWPRYPIKDT*EDVVHLAPRAA Trigger: AGCAGCCCTTGGGGCGAGATGTACAACATCTTCCCAAGTGTCCTTGATTGGATACCTGGGCCACACAAACGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS CAA 72 bp | AGCGTTTGTGTGGCCCAGGTATCCAATCAAGGACACTaGGGAAGATGTTGTACATCTCGCCCCAAGGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SVCVAQVSNQGH*GRCCTSRPKGC Trigger: GCAGCCCTTGGGGCGAGATGTACAACATCTTCCCAAGTGTCCTTGATTGGATACCTGGGCCACACAAACGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS GCA 72 bp | CCCACCACACGGTCAATCTCTTCCTGCACGCGGGCTTaGACTTTGGGGTATTTCATAAGAATAAGGAAGGCG | + |
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Preference number: 6 (lower is better) Translates to: PTTRSISSCTRA*TLGYFIRIRKA Trigger: CGCCTTCCTTATTCTTATGAAATACCCCAAAGTGCAAGCCCGCGTGCAGGAAGAGATTGACCGTGTGGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003100.10 ENSMUST00000206552.2 |
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| CDS CAA 72 bp | TCGAAGCGACTTCCGAAGACGACAGAGCAGATAATGTaGGACACAGAGCGGCTCAGGATAAACACGGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: SKRLPKTTEQIM*DTERLRINTGS Trigger: TGACCCCGTGTTTATCCTGAGCCGCTCTGTGTCCAACATTATCTGCTCTGTCGTCTTCGGAAGTCGCTTCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003100.10 ENSMUST00000206552.2 |
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| CDS CAA 72 bp | CCCCACCACACGGTCAATCTCTTCCTGCACGCGGGCTaGCACTTTGGGGTATTTCATAAGAATAAGGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: PHHTVNLFLHAG*HFGVFHKNKEG Trigger: GCCTTCCTTATTCTTATGAAATACCCCAAAGTGCAAGCCCGCGTGCAGGAAGAGATTGACCGTGTGGTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003100.10 ENSMUST00000206552.2 |
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| CDS CAA 72 bp | GGCCCAGGTATCCAATCAAGGACACTTGGGAAGATGTaGTACATCTCGCCCCAAGGGCTGCTCATAATCTTG | + |
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Preference number: 6 (lower is better) Translates to: GPGIQSRTLGKM*YISPQGLLIIL Trigger: CAAGATTATGAGCAGCCCTTGGGGCGAGATGTACAACATCTTCCCAAGTGTCCTTGATTGGATACCTGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS CAA 72 bp | GATGCTTCTTTTTCCCATGCCAAAGTTCCGCAGGATTaGGACAGAGAACCTTCTGAGGATCTTCCAGCGCTC | + |
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Preference number: 6 (lower is better) Translates to: DASFSHAKVPQD*DREPSEDLPAL Trigger: GAGCGCTGGAAGATCCTCAGAAGGTTCTCTGTCCAAATCCTGCGGAACTTTGGCATGGGAAAAAGAAGCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003100.10 ENSMUST00000206552.2 |
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| CDS CAA 72 bp | AGATCTTTCATGCCTCCAAAGTTCCGGAACAAGCGTTaGTGTGGCCCAGGTATCCAATCAAGGACACTTGGG | + |
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Preference number: 6 (lower is better) Translates to: RSFMPPKFRNKR*CGPGIQSRTLG Trigger: CCCAAGTGTCCTTGATTGGATACCTGGGCCACACAAACGCTTGTTCCGGAACTTTGGAGGCATGAAAGATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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| CDS CCA 72 bp | ATGCTTCTTTTTCCCATGCCAAAGTTCCGCAGGATTTaGACAGAGAACCTTCTGAGGATCTTCCAGCGCTCT | + |
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Preference number: 6 (lower is better) Translates to: MLLFPMPKFRRI*TENLLRIFQRS Trigger: AGAGCGCTGGAAGATCCTCAGAAGGTTCTCTGTCCAAATCCTGCGGAACTTTGGCATGGGAAAAAGAAGCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003100.10 ENSMUST00000206552.2 |
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| CDS CCA 72 bp | TTTCATGCCTCCAAAGTTCCGGAACAAGCGTTTGTGTaGCCCAGGTATCCAATCAAGGACACTTGGGAAGAT | + |
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Preference number: 6 (lower is better) Translates to: FHASKVPEQAFV*PRYPIKDTWED Trigger: ATCTTCCCAAGTGTCCTTGATTGGATACCTGGGCCACACAAACGCTTGTTCCGGAACTTTGGAGGCATGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003100.10 |
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