Pregenerated sensors for CYP2E1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025479Ensembl transcript IDs: ENSMUST00000026552.9, ENSMUST00000209253.2, ENSMUST00000210235.2
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATCTCGATACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCCGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCCACT | + |
|
Preference number: 1 (lower is better) Translates to: ISIQMVVSHHVVAGI*TPDLRKSSRVLLPT Trigger: AGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTATCGAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| 3UTR CCA 90 bp | GAGTCAGATCTCGATACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCCGGACCTTCGGAAGAGCAGTCGGGTGCTCTT | + |
|
Preference number: 1 (lower is better) Translates to: ESDLDTDGCEPPCGC*DLNSGPSEEQSGAL Trigger: AAGAGCACCCGACTGCTCTTCCGAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTATCGAGATCTGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| 3UTR CAA 90 bp | GATCTCGATACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCCGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCCAC | + |
|
Preference number: 2 (lower is better) Translates to: DLDTDGCEPPCGCWD*NSGPSEEQSGALTH Trigger: GTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTATCGAGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| 3UTR CCA 72 bp | CTCGATACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCCGGACCTTCGGAAGAGCAGTCG | + |
|
Preference number: 3 (lower is better) Translates to: LDTDGCEPPCGC*DLNSGPSEEQS Trigger: CGACTGCTCTTCCGAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTATCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| 3UTR GCA 72 bp | GATCTCGATACAGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCCGGACCTTCGGAAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: DLDTDGCEPPCG*WDLNSGPSEEQ Trigger: CTGCTCTTCCGAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTATCGAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR TCA 90 bp | CAGACACTCCAGAAGACAGAGTCAGATCTCGATACAGATGGTTGTGAGCCACCAGACCCAGGTGCAGTGTaGACACTGGCCCGAAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: QTLQKTESDLDTDGCEPPDPGAV*TLARSA Trigger: AGCGCTTCGGGCCAGTGTTCACACTGCACCTGGGTC...TGGTGGCTCACAACCATCTGTATCGAGATCTGACTCTGTCTTCTGGAGTGTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR TCA 90 bp | ACACTCCAGAAGACAGAGTCAGATCTCGATACAGATGGTTGTGAGCCACCATGTGACCCAGGTGCAGTGTaGACACTGGCCCGAAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: TLQKTESDLDTDGCEPPCDPGAV*TLARSA Trigger: AGCGCTTCGGGCCAGTGTTCACACTGCACCTGGGTC...ACATGGTGGCTCACAACCATCTGTATCGAGATCTGACTCTGTCTTCTGGAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR GCA 90 bp | GATCTCGATACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCCACGGTGTCTCGGGTTaGTTCGTGGGGCAGGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: DLDTDGCEPPCGCWDLNSHGVSG*FVGQVG Trigger: TCCAACCTGCCCCACGAAGCAACCCGAGACACCGTG...GGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTATCGAGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR GCA 90 bp | GAGTCAGATCTCGATACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGCACGGTGTCTCGGGTTaGTTCGTGGGGCAGGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ESDLDTDGCEPPCGCWDLHGVSG*FVGQVG Trigger: TCCAACCTGCCCCACGAAGCAACCCGAGACACCGTG...CAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTATCGAGATCTGACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR CCA 90 bp | AGACAGAGTCAGATCTCGATACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGTGCAGGGGCACGGCTTaGCCCAATAACCCTGTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: RQSQISIQMVVSHHVVAGCRGTA*PNNPVN Trigger: ATTGACAGGGTTATTGGGCCAAGCCGTGCCCCTGCA...CCCAGCAACCACATGGTGGCTCACAACCATCTGTATCGAGATCTGACTCTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR CCA 90 bp | AGACACTCCAGAAGACAGAGTCAGATCTCGATACAGATGGTTGTGAGCCACCATTCTCGGGTTGCTTCGTaGGGCAGGTTGGAAGGGACG | + |
|
Preference number: 4 (lower is better) Translates to: RHSRRQSQISIQMVVSHHSRVAS*GRLEGT Trigger: CGTCCCTTCCAACCTGCCCCACGAAGCAACCCGAGA...ATGGTGGCTCACAACCATCTGTATCGAGATCTGACTCTGTCTTCTGGAGTGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR TCA 90 bp | CACTGTAGCTGTCTTCAGACACTCCAGAAGACAGAGTCAGATCTCGATACAGATACCACGATGCGCCTCTaGCCCAGGTGCAGTGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HCSCLQTLQKTESDLDTDTTMRL*PRCSVN Trigger: GTTCACACTGCACCTGGGTCAGAGGCGCATCGTGGT...ATCTGTATCGAGATCTGACTCTGTCTTCTGGAGTGTCTGAAGACAGCTACAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR GCA 90 bp | CTCGATACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCGGAGTGCCTCTCTTTGGATaGGGGCCTCATTACCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LDTDGCEPPCGCWDLNSGVPLFG*GPHYPV Trigger: AACAGGGTAATGAGGCCCGCATCCAAAGAGAGGCAC...TCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTATCGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR CCA 90 bp | CACTCCAGAAGACAGAGTCAGATCTCGATACAGATGGTTGTGAGCCACCATGTGTGCAGGGGCACGGCTTaGCCCAATAACCCTGTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: HSRRQSQISIQMVVSHHVCRGTA*PNNPVN Trigger: ATTGACAGGGTTATTGGGCCAAGCCGTGCCCCTGCA...CACATGGTGGCTCACAACCATCTGTATCGAGATCTGACTCTGTCTTCTGGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR TCA 90 bp | ACACTCCAGAAGACAGAGTCAGATCTCGATACAGATGGTTGTGAGCCACCATGTTCAGTAGCACCTCCTTaGCAGCCTTGTAGCCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: TLQKTESDLDTDGCEPPCSVAPP*QPCSHA Trigger: TGCATGGCTACAAGGCTGTCAAGGAGGTGCTACTGA...ACATGGTGGCTCACAACCATCTGTATCGAGATCTGACTCTGTCTTCTGGAGTGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR TCA 90 bp | CAGACACTCCAGAAGACAGAGTCAGATCTCGATACAGATGGTTGTGAGCCACCAGCAGTTGATGTCCAGTaGCTTAAGGTGTTCCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QTLQKTESDLDTDGCEPPAVDVQ*LKVFLG Trigger: GCCAAGGAACACCTTAAGTCACTGGACATCAACTGC...TGGTGGCTCACAACCATCTGTATCGAGATCTGACTCTGTCTTCTGGAGTGTCTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026552.9 |
||
| CDS-3UTR GCA 90 bp | AGACACTCCAGAAGACAGAGTCAGATCTCGATACAGATGGTTGTGAGCCACCATGTGCCTCTCTTTGGATaGGGGCCTCATTACCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RHSRRQSQISIQMVVSHHVPLFG*GPHYPV Trigger: AACAGGGTAATGAGGCCCGCATCCAAAGAGAGGCAC...ATGGTGGCTCACAACCATCTGTATCGAGATCTGACTCTGTCTTCTGGAGTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR CCA 90 bp | TGTAAGTACACTGTAGCTGTCTTCAGACACTCCAGAAGACAGAGTCAGATCTCGGTGCAGTGTGAACACTaGCCCGAAGCGCTTTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: CKYTVAVFRHSRRQSQISVQCEH*PEALCQ Trigger: TTGGCAAAGCGCTTCGGGCCAGTGTTCACACTGCAC...CGAGATCTGACTCTGTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACTTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR CCA 90 bp | CACTGTAGCTGTCTTCAGACACTCCAGAAGACAGAGTCAGATCTCGATACAGATGTGCAGTGTGAACACTaGCCCGAAGCGCTTTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HCSCLQTLQKTESDLDTDVQCEH*PEALCQ Trigger: TTGGCAAAGCGCTTCGGGCCAGTGTTCACACTGCAC...ATCTGTATCGAGATCTGACTCTGTCTTCTGGAGTGTCTGAAGACAGCTACAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR CCA 90 bp | ACACTCCAGAAGACAGAGTCAGATCTCGATACAGATGGTTGTGAGCCACCATGTAGATCTGTTTCCAGATaGATACGAGGAGGAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TLQKTESDLDTDGCEPPCRSVSR*IRGGGW Trigger: CCACCCTCCTCCTCGTATCCATCTGGAAACAGATCT...ACATGGTGGCTCACAACCATCTGTATCGAGATCTGACTCTGTCTTCTGGAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR CCA 90 bp | ATTATATGTAAGTACACTGTAGCTGTCTTCAGACACTCCAGAAGACAGAGTCAGTCTCGGGTTGCTTCGTaGGGCAGGTTGGAAGGGACG | + |
|
Preference number: 4 (lower is better) Translates to: IICKYTVAVFRHSRRQSQSRVAS*GRLEGT Trigger: CGTCCCTTCCAACCTGCCCCACGAAGCAACCCGAGA...CTGACTCTGTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACTTACATATAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR TCA 90 bp | TGTAAGTACACTGTAGCTGTCTTCAGACACTCCAGAAGACAGAGTCAGATCTCGAGAGAATATCCGCAATaGCATTGCAGGGTGCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: CKYTVAVFRHSRRQSQISREYPQ*HCRVHS Trigger: GCTGTGCACCCTGCAATGTCATTGCGGATATTCTCT...CGAGATCTGACTCTGTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACTTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR CCA 90 bp | TACACTGTAGCTGTCTTCAGACACTCCAGAAGACAGAGTCAGATCTCGATACAGAGATCTGTTTCCAGATaGATACGAGGAGGAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YTVAVFRHSRRQSQISIQRSVSR*IRGGGW Trigger: CCACCCTCCTCCTCGTATCCATCTGGAAACAGATCT...CTGTATCGAGATCTGACTCTGTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR CCA 90 bp | TACACTGTAGCTGTCTTCAGACACTCCAGAAGACAGAGTCAGATCTCGATACAGAATTGGGAAAGGTCCTaGGGGCAGGTTCCAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YTVAVFRHSRRQSQISIQNWERS*GQVPTS Trigger: AGAAGTTGGAACCTGCCCCCAGGACCTTTCCCAATT...CTGTATCGAGATCTGACTCTGTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR CCA 90 bp | CACTGTAGCTGTCTTCAGACACTCCAGAAGACAGAGTCAGATCTCGATACAGATTCCAAAGAAAGGAATTaGGAAAGGTCCTGGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HCSCLQTLQKTESDLDTDSKERN*ERSWGQ Trigger: CTGCCCCCAGGACCTTTCCCAATTCCTTTCTTTGGA...ATCTGTATCGAGATCTGACTCTGTCTTCTGGAGTGTCTGAAGACAGCTACAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR CCA 90 bp | GAGTCAGATCTCGATACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGGTGTACATGGGTTCTTaGCTGTGTTTTTCCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ESDLDTDGCEPPCGCWDLVYMGS*LCFSFS Trigger: GGAGAAGGAAAAACACAGCCAAGAACCCATGTACAC...CAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTATCGAGATCTGACTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026552.9 |
||
| CDS-3UTR TCA 90 bp | TTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACACTCCAGAAGACAGAGTACCACGATGCGCCTCTaGCCCAGGTGCAGTGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: FIICKYTVAVFRHSRRQSTTMRL*PRCSVN Trigger: GTTCACACTGCACCTGGGTCAGAGGCGCATCGTGGT...ACTCTGTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACTTACATATAATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR CCA 90 bp | GTAGCTGTCTTCAGACACTCCAGAAGACAGAGTCAGATCTCGATACAGATGGTTGTAGGGTCAAAAGGCTaGCCTTTGGTCTTTTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VAVFRHSRRQSQISIQMVVGSKG*PLVFLS Trigger: GCTCAAAAAGACCAAAGGCCAGCCTTTTGACCCTAC...AACCATCTGTATCGAGATCTGACTCTGTCTTCTGGAGTGTCTGAAGACAGCTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR CCA 90 bp | GTAGCTGTCTTCAGACACTCCAGAAGACAGAGTCAGATCTCGATACAGATGGTTGTGTACATGGGTTCTTaGCTGTGTTTTTCCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: VAVFRHSRRQSQISIQMVVYMGS*LCFSWI Trigger: GATCCAGGAAAAACACAGCCAAGAACCCATGTACAC...AACCATCTGTATCGAGATCTGACTCTGTCTTCTGGAGTGTCTGAAGACAGCTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209253.2 |
||
| CDS-3UTR TCA 90 bp | CACTGTAGCTGTCTTCAGACACTCCAGAAGACAGAGTCAGATCTCGATACAGATTTTCTGGGTATTTCATaGGAATCAGGAGCCCATATC | + |
|
Preference number: 4 (lower is better) Translates to: HCSCLQTLQKTESDLDTDFLGIS*ESGAHI Trigger: GATATGGGCTCCTGATTCTCATGAAATACCCAGAAA...ATCTGTATCGAGATCTGACTCTGTCTTCTGGAGTGTCTGAAGACAGCTACAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR CCA 90 bp | ATTATATGTAAGTACACTGTAGCTGTCTTCAGACACTCCAGAAGACAGAGTCAGAATTGGGAAAGGTCCTaGGGGCAGGTTCCAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IICKYTVAVFRHSRRQSQNWERS*GQVPTS Trigger: AGAAGTTGGAACCTGCCCCCAGGACCTTTCCCAATT...CTGACTCTGTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACTTACATATAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR CCA 90 bp | GAGTCAGATCTCGATACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGTTCATGACTTTTCTGTaGCTTCCAGGTAGATATTGT | + |
|
Preference number: 4 (lower is better) Translates to: ESDLDTDGCEPPCGCWDLFMTFL*LPGRYC Trigger: ACAATATCTACCTGGAAGCCACAGAAAAGTCATGAA...CAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTATCGAGATCTGACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026552.9 |
||
| CDS-3UTR CCA 90 bp | ATTATATGTAAGTACACTGTAGCTGTCTTCAGACACTCCAGAAGACAGAGTCAGGTAGGGTCAAAAGGCTaGCCTTTGGTCTTTTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IICKYTVAVFRHSRRQSQVGSKG*PLVFLS Trigger: GCTCAAAAAGACCAAAGGCCAGCCTTTTGACCCTAC...CTGACTCTGTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACTTACATATAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR CCA 90 bp | GAGTCAGATCTCGATACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAAATGTCTCTGGATCTaGAAACTCATAGTTGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ESDLDTDGCEPPCGCWDLKCLWI*KLIVVK Trigger: TTTGACAACTATGAGTTTCCAGATCCAGAGACATTT...CAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTATCGAGATCTGACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR CCA 90 bp | GAGTCAGATCTCGATACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAGGTTTAAATGTCTCTaGATCTGGAAACTCATAGTT | + |
|
Preference number: 4 (lower is better) Translates to: ESDLDTDGCEPPCGCWDLRFKCL*IWKLIV Trigger: AACTATGAGTTTCCAGATCCAGAGACATTTAAACCT...CAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTATCGAGATCTGACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR CCA 90 bp | ATATGTAAGTACACTGTAGCTGTCTTCAGACACTCCAGAAGACAGAGTCAGATCAAGGGAGTCCAGAGTTaGAATTACAACTGTACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ICKYTVAVFRHSRRQSQIKGVQS*NYNCTL Trigger: AAGGGTACAGTTGTAATTCCAACTCTGGACTCCCTT...GATCTGACTCTGTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACTTACATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR TCA 90 bp | TTATTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACACTCCAGAAGACAGAGAGAATATCCGCAATaGCATTGCAGGGTGCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LFIICKYTVAVFRHSRRQREYPQ*HCRVHS Trigger: GCTGTGCACCCTGCAATGTCATTGCGGATATTCTCT...CTGTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACTTACATATAATAAATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR GCA 90 bp | TGTAAGTACACTGTAGCTGTCTTCAGACACTCCAGAAGACAGAGTCAGATCTCGTTCAGATTAAAATGCTaGAGAATAGCAGACAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CKYTVAVFRHSRRQSQISFRLKC*RIADKS Trigger: GCTTTTGTCTGCTATTCTGCAGCATTTTAATCTGAA...CGAGATCTGACTCTGTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACTTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR GCA 90 bp | TACACTGTAGCTGTCTTCAGACACTCCAGAAGACAGAGTCAGATCTCGATACAGGACTTCAGATTAAAATaGTGCAGAATAGCAGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: YTVAVFRHSRRQSQISIQDFRLK*CRIADK Trigger: TTTGTCTGCTATTCTGCAGCATTTTAATCTGAAGTC...CTGTATCGAGATCTGACTCTGTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR CCA 90 bp | CACTGTAGCTGTCTTCAGACACTCCAGAAGACAGAGTCAGATCTCGATACAGATAAATGTCTCTGGATCTaGAAACTCATAGTTGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: HCSCLQTLQKTESDLDTDKCLWI*KLIVVK Trigger: TTTGACAACTATGAGTTTCCAGATCCAGAGACATTT...ATCTGTATCGAGATCTGACTCTGTCTTCTGGAGTGTCTGAAGACAGCTACAGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR CCA 90 bp | ATTATATGTAAGTACACTGTAGCTGTCTTCAGACACTCCAGAAGACAGAGTCAGAGCGCTTTGCCAACTTaGTTAAAGACTTGGGAATAT | + |
|
Preference number: 4 (lower is better) Translates to: IICKYTVAVFRHSRRQSQSALPT*LKTWEY Trigger: ATATTCCCAAGTCTTTAACCAAGTTGGCAAAGCGCT...CTGACTCTGTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACTTACATATAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR GCA 90 bp | ATATGTAAGTACACTGTAGCTGTCTTCAGACACTCCAGAAGACAGAGTCAGATCGACTTCAGATTAAAATaGTGCAGAATAGCAGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: ICKYTVAVFRHSRRQSQIDFRLK*CRIADK Trigger: TTTGTCTGCTATTCTGCAGCATTTTAATCTGAAGTC...GATCTGACTCTGTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACTTACATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR TCA 90 bp | TTATTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACACTCCAGAAGACAGTTTCTGGGTATTTCATaGGAATCAGGAGCCCATATC | + |
|
Preference number: 4 (lower is better) Translates to: LFIICKYTVAVFRHSRRQFLGIS*ESGAHI Trigger: GATATGGGCTCCTGATTCTCATGAAATACCCAGAAA...CTGTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACTTACATATAATAAATAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR CCA 90 bp | TTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACACTCCAGAAGACAGAGTAGCGCTTTGCCAACTTaGTTAAAGACTTGGGAATAT | + |
|
Preference number: 4 (lower is better) Translates to: FIICKYTVAVFRHSRRQSSALPT*LKTWEY Trigger: ATATTCCCAAGTCTTTAACCAAGTTGGCAAAGCGCT...ACTCTGTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACTTACATATAATAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR CCA 90 bp | TTATTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACACTCCAGAAGACAGAGGTTTAAATGTCTCTaGATCTGGAAACTCATAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LFIICKYTVAVFRHSRRQRFKCL*IWKLIV Trigger: AACTATGAGTTTCCAGATCCAGAGACATTTAAACCT...CTGTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACTTACATATAATAAATAA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS TCA 90 bp | CCCCTCGGCCAGAGAACTCATTCTTGTGGTTCAGTAGCACCTCCTTaGCAGCCTTGTAGCCATGCAGGACCACGATGCGCCTCTGACCCA | + |
|
Preference number: 5 (lower is better) Translates to: PLGQRTHSCGSVAPP*QPCSHAGPRCASDP Trigger: TGGGTCAGAGGCGCATCGTGGTCCTGCATGGCTACAAGGCTGTCAAGGAGGTGCTACTGAACCACAAGAATGAGTTCTCTGGCCGAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 ENSMUST00000210235.2 |
||
| CDS TCA 90 bp | TGTAGCCATGCAGGACCACGATGCGCCTCTGACCCAGGTGCAGTGTaGACACTGGCCCGAAGCGCTTTGCCAACTTGGTTAAAGACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: CSHAGPRCASDPGAV*TLARSALPTWLKTW Trigger: CCAAGTCTTTAACCAAGTTGGCAAAGCGCTTCGGGCCAGTGTTCACACTGCACCTGGGTCAGAGGCGCATCGTGGTCCTGCATGGCTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 ENSMUST00000210235.2 |
||
| CDS CCA 90 bp | AAGGTCCTGGGGGCAGGTTCCAACTTCTATAGATCTGTTTCCAGATaGATACGAGGAGGAGGGTGGCGATCCAGACAAGCAAGGCAACGG | + |
|
Preference number: 5 (lower is better) Translates to: KVLGAGSNFYRSVSR*IRGGGWRSRQARQR Trigger: CCGTTGCCTTGCTTGTCTGGATCGCCACCCTCCTCCTCGTATCCATCTGGAAACAGATCTATAGAAGTTGGAACCTGCCCCCAGGACCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 ENSMUST00000210235.2 |
||
| CDS-3UTR CAA 90 bp | CACTCCAGAAGACAGAGTCAGATCTCGATACAGATGGTTGTGAGCCACCATGTGGCTTCGTGGGGCAGGTaGGAAGGGACGAGGTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: HSRRQSQISIQMVVSHHVASWGR*EGTRLM Trigger: CATCAACCTCGTCCCTTCCAACCTGCCCCACGAAGC...CACATGGTGGCTCACAACCATCTGTATCGAGATCTGACTCTGTCTTCTGGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR CAA 90 bp | AGACAGAGTCAGATCTCGATACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATATCCGCAATGACATaGCAGGGTGCACAGCCAATC | + |
|
Preference number: 5 (lower is better) Translates to: RQSQISIQMVVSHHVVAGISAMT*QGAQPI Trigger: GATTGGCTGTGCACCCTGCAATGTCATTGCGGATAT...CCCAGCAACCACATGGTGGCTCACAACCATCTGTATCGAGATCTGACTCTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR CAA 90 bp | ATATGTAAGTACACTGTAGCTGTCTTCAGACACTCCAGAAGACAGAGTCAGATCACACGGTGTCTCGGGTaGCTTCGTGGGGCAGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ICKYTVAVFRHSRRQSQITRCLG*LRGAGW Trigger: CCAACCTGCCCCACGAAGCAACCCGAGACACCGTGT...GATCTGACTCTGTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACTTACATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS GCA 90 bp | ATGAAGTTTCTCTTTGGTCTTTTTGAGCTCCTCCACCAGGAAGTGTaGCTCTCTTTGGATGCGGGCCTCATTACCCTGTTTCCCCATTCC | + |
|
Preference number: 5 (lower is better) Translates to: MKFLFGLFELLHQEV*LSLDAGLITLFPHS Trigger: GGAATGGGGAAACAGGGTAATGAGGCCCGCATCCAAAGAGAGGCACACTTCCTGGTGGAGGAGCTCAAAAAGACCAAAGAGAAACTTCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210235.2 |
||
| CDS TCA 90 bp | ACTGCAGGGGCACGGCTTGGCCCAATAACCCTGTCAATTTCTTCATaGAGTTTCTCTTTGGTCTTTTTGAGCTCCTCCACCAGGAAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: TAGARLGPITLSISS*SFSLVFLSSSTRKC Trigger: ACACTTCCTGGTGGAGGAGCTCAAAAAGACCAAAGAGAAACTTCATGAAGAAATTGACAGGGTTATTGGGCCAAGCCGTGCCCCTGCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210235.2 |
||
| CDS-3UTR CAA 90 bp | TGTAAGTACACTGTAGCTGTCTTCAGACACTCCAGAAGACAGAGTCAGATCTCGCTGGCCCGAAGCGCTTaGCCAACTTGGTTAAAGACT | + |
|
Preference number: 5 (lower is better) Translates to: CKYTVAVFRHSRRQSQISLARSA*PTWLKT Trigger: AGTCTTTAACCAAGTTGGCAAAGCGCTTCGGGCCAG...CGAGATCTGACTCTGTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACTTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR CAA 90 bp | TACACTGTAGCTGTCTTCAGACACTCCAGAAGACAGAGTCAGATCTCGATACAGCTGGCCCGAAGCGCTTaGCCAACTTGGTTAAAGACT | + |
|
Preference number: 5 (lower is better) Translates to: YTVAVFRHSRRQSQISIQLARSA*PTWLKT Trigger: AGTCTTTAACCAAGTTGGCAAAGCGCTTCGGGCCAG...CTGTATCGAGATCTGACTCTGTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR CAA 90 bp | CTCGATACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCGGAAAAGGGAGTCCAGAGTaGGAATTACAACTGTACCCT | + |
|
Preference number: 5 (lower is better) Translates to: LDTDGCEPPCGCWDLNSGKGSPE*ELQLYP Trigger: AGGGTACAGTTGTAATTCCAACTCTGGACTCCCTTT...TCCGGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTATCGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS GCA 90 bp | ATCGAAGCGTTTGTTGAAGAGAATATCCGCAATGACATTGCAGGGTaGACAGCCAATCAGAAAGGTAGGGTCAAAAGGCTGGCCTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: IEAFVEENIRNDIAG*TANQKGRVKRLAFG Trigger: ACCAAAGGCCAGCCTTTTGACCCTACCTTTCTGATTGGCTGTGCACCCTGCAATGTCATTGCGGATATTCTCTTCAACAAACGCTTCGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR CAA 90 bp | ATTATATGTAAGTACACTGTAGCTGTCTTCAGACACTCCAGAAGACAGAGTCAGACATCCCGGGGGCAGTaGATGTCCAGTGACTTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: IICKYTVAVFRHSRRQSQTSRGQ*MSSDLR Trigger: CCTTAAGTCACTGGACATCAACTGCCCCCGGGATGT...CTGACTCTGTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACTTACATATAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026552.9 |
||
| CDS-3UTR CAA 90 bp | TTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACACTCCAGAAGACAGAGTGCTTCGTGGGGCAGGTaGGAAGGGACGAGGTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: FIICKYTVAVFRHSRRQSASWGR*EGTRLM Trigger: CATCAACCTCGTCCCTTCCAACCTGCCCCACGAAGC...ACTCTGTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACTTACATATAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS CCA 90 bp | AGAACAGGTCGGCCAAAGTCACAGAAATATTTTCCATTGTGTACATaGGTTCTTGGCTGTGTTTTTCCTGGATCCAGGGAGTACTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RTGRPKSQKYFPLCT*VLGCVFPGSREYSA Trigger: TGCTGAGTACTCCCTGGATCCAGGAAAAACACAGCCAAGAACCCATGTACACAATGGAAAATATTTCTGTGACTTTGGCCGACCTGTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209253.2 |
||
| CDS-3UTR CAA 90 bp | TGTAAGTACACTGTAGCTGTCTTCAGACACTCCAGAAGACAGAGTCAGATCTCGGACTTAAGGTGTTCCTaGGCTTTTCCAAGTGTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: CKYTVAVFRHSRRQSQISDLRCS*AFPSVY Trigger: GTACACACTTGGAAAAGCCAAGGAACACCTTAAGTC...CGAGATCTGACTCTGTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACTTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026552.9 |
||
| CDS-3UTR CAA 90 bp | GAGTCAGATCTCGATACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGCAGAAATATTTTCCATaGTGTACATGGGTTCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: ESDLDTDGCEPPCGCWDLQKYFP*CTWVLG Trigger: GCCAAGAACCCATGTACACAATGGAAAATATTTCTG...CAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTATCGAGATCTGACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR CAA 90 bp | ATTATATGTAAGTACACTGTAGCTGTCTTCAGACACTCCAGAAGACAGAGTCAGATATCCGCAATGACATaGCAGGGTGCACAGCCAATC | + |
|
Preference number: 5 (lower is better) Translates to: IICKYTVAVFRHSRRQSQISAMT*QGAQPI Trigger: GATTGGCTGTGCACCCTGCAATGTCATTGCGGATAT...CTGACTCTGTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACTTACATATAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR CAA 90 bp | TACACTGTAGCTGTCTTCAGACACTCCAGAAGACAGAGTCAGATCTCGATACAGTTGAAAATAATCCCCTaGTTCTTGTACTCCTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: YTVAVFRHSRRQSQISIQLKIIP*FLYSWN Trigger: GTTCCAGGAGTACAAGAACAAGGGGATTATTTTCAA...CTGTATCGAGATCTGACTCTGTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR CAA 90 bp | GTAGCTGTCTTCAGACACTCCAGAAGACAGAGTCAGATCTCGATACAGATGGTTCATGTGGGTCCATTATaGAAAATAATCCCCTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VAVFRHSRRQSQISIQMVHVGPL*KIIPLF Trigger: GAACAAGGGGATTATTTTCAATAATGGACCCACATG...AACCATCTGTATCGAGATCTGACTCTGTCTTCTGGAGTGTCTGAAGACAGCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR CAA 90 bp | TGTAAGTACACTGTAGCTGTCTTCAGACACTCCAGAAGACAGAGTCAGATCTCGCAGAAATATTTTCCATaGTGTACATGGGTTCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: CKYTVAVFRHSRRQSQISQKYFP*CTWVLG Trigger: GCCAAGAACCCATGTACACAATGGAAAATATTTCTG...CGAGATCTGACTCTGTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACTTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR CAA 90 bp | ATTATATGTAAGTACACTGTAGCTGTCTTCAGACACTCCAGAAGACAGAGTCAGAAAGGGAGTCCAGAGTaGGAATTACAACTGTACCCT | + |
|
Preference number: 5 (lower is better) Translates to: IICKYTVAVFRHSRRQSQKGSPE*ELQLYP Trigger: AGGGTACAGTTGTAATTCCAACTCTGGACTCCCTTT...CTGACTCTGTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACTTACATATAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS-3UTR CAA 90 bp | TTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACACTCCAGAAGACAGAGTTTGAAAATAATCCCCTaGTTCTTGTACTCCTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: FIICKYTVAVFRHSRRQSLKIIP*FLYSWN Trigger: GTTCCAGGAGTACAAGAACAAGGGGATTATTTTCAA...ACTCTGTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACTTACATATAATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS TCA 72 bp | GCAGGACCACGATGCGCCTCTGACCCAGGTGCAGTGTaGACACTGGCCCGAAGCGCTTTGCCAACTTGGTTA | + |
|
Preference number: 6 (lower is better) Translates to: AGPRCASDPGAV*TLARSALPTWL Trigger: TAACCAAGTTGGCAAAGCGCTTCGGGCCAGTGTTCACACTGCACCTGGGTCAGAGGCGCATCGTGGTCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 ENSMUST00000210235.2 |
||
| CDS GCA 72 bp | GGGGATGACATATCCTCGGAACACGGTGTCTCGGGTTaGTTCGTGGGGCAGGTTGGAAGGGACGAGGTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: GDDISSEHGVSG*FVGQVGRDEVD Trigger: ATCAACCTCGTCCCTTCCAACCTGCCCCACGAAGCAACCCGAGACACCGTGTTCCGAGGATATGTCATCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 ENSMUST00000210235.2 |
||
| CDS CCA 72 bp | ACATATCCTCGGAACACGGTGTCTCGGGTTGCTTCGTaGGGCAGGTTGGAAGGGACGAGGTTGATGAATCTC | + |
|
Preference number: 6 (lower is better) Translates to: TYPRNTVSRVAS*GRLEGTRLMNL Trigger: GAGATTCATCAACCTCGTCCCTTCCAACCTGCCCCACGAAGCAACCCGAGACACCGTGTTCCGAGGATATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 ENSMUST00000210235.2 |
||
| CDS CAA 90 bp | CAGCCAATCAGAAAGGTAGGGTCAAAAGGCTGGCCTTTGGTCTTTTaGAGCTCCTCCACCAGGAAGTGTGCCTCTCTTTGGATGCGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: QPIRKVGSKGWPLVF*SSSTRKCASLWMRA Trigger: GGCCCGCATCCAAAGAGAGGCACACTTCCTGGTGGAGGAGCTCAAAAAGACCAAAGGCCAGCCTTTTGACCCTACCTTTCTGATTGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS TCA 72 bp | CAGAGAACTCATTCTTGTGGTTCAGTAGCACCTCCTTaGCAGCCTTGTAGCCATGCAGGACCACGATGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: QRTHSCGSVAPP*QPCSHAGPRCA Trigger: GGCGCATCGTGGTCCTGCATGGCTACAAGGCTGTCAAGGAGGTGCTACTGAACCACAAGAATGAGTTCTCTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 ENSMUST00000210235.2 |
||
| CDS CCA 72 bp | TTTTTGAGCTCCTCCACCAGGAAGTGTGCCTCTCTTTaGATGCGGGCCTCATTACCCTGTTTCCCCATTCCC | + |
|
Preference number: 6 (lower is better) Translates to: FLSSSTRKCASL*MRASLPCFPIP Trigger: GGGAATGGGGAAACAGGGTAATGAGGCCCGCATCCAAAGAGAGGCACACTTCCTGGTGGAGGAGCTCAAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 ENSMUST00000210235.2 |
||
| CDS CAA 72 bp | CTTTTTGAGCTCCTCCACCAGGAAGTGTGCCTCTCTTaGGATGCGGGCCTCATTACCCTGTTTCCCCATTCC | + |
|
Preference number: 6 (lower is better) Translates to: LFELLHQEVCLS*DAGLITLFPHS Trigger: GGAATGGGGAAACAGGGTAATGAGGCCCGCATCCAAAGAGAGGCACACTTCCTGGTGGAGGAGCTCAAAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 ENSMUST00000210235.2 |
||
| CDS CAA 90 bp | CAGGGTGCACAGCCAATCAGAAAGGTAGGGTCAAAAGGCTGGCCTTaGGTCTTTTTGAGCTCCTCCACCAGGAAGTGTGCCTCTCTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: QGAQPIRKVGSKGWP*VFLSSSTRKCASLW Trigger: CCAAAGAGAGGCACACTTCCTGGTGGAGGAGCTCAAAAAGACCAAAGGCCAGCCTTTTGACCCTACCTTTCTGATTGGCTGTGCACCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS GCA 72 bp | GCCTTTGGTCTTTTTGAGCTCCTCCACCAGGAAGTGTaGCTCTCTTTGGATGCGGGCCTCATTACCCTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: AFGLFELLHQEV*LSLDAGLITLF Trigger: AAACAGGGTAATGAGGCCCGCATCCAAAGAGAGGCACACTTCCTGGTGGAGGAGCTCAAAAAGACCAAAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS CCA 72 bp | GGTGCACAGCCAATCAGAAAGGTAGGGTCAAAAGGCTaGCCTTTGGTCTTTTTGAGCTCCTCCACCAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GAQPIRKVGSKG*PLVFLSSSTRK Trigger: CTTCCTGGTGGAGGAGCTCAAAAAGACCAAAGGCCAGCCTTTTGACCCTACCTTTCTGATTGGCTGTGCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS CAA 72 bp | CAGCCAATCAGAAAGGTAGGGTCAAAAGGCTGGCCTTaGGTCTTTTTGAGCTCCTCCACCAGGAAGTGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: QPIRKVGSKGWP*VFLSSSTRKCA Trigger: GGCACACTTCCTGGTGGAGGAGCTCAAAAAGACCAAAGGCCAGCCTTTTGACCCTACCTTTCTGATTGGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS GCA 72 bp | CTCTTTGGTCTTTTTGAGCTCCTCCACCAGGAAGTGTaGCTCTCTTTGGATGCGGGCCTCATTACCCTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LFGLFELLHQEV*LSLDAGLITLF Trigger: AAACAGGGTAATGAGGCCCGCATCCAAAGAGAGGCACACTTCCTGGTGGAGGAGCTCAAAAAGACCAAAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210235.2 |
||
| CDS CAA 90 bp | TTCTCCATCTCTATGAGGAGACAGTCAGTCACATCCCGGGGGCAGTaGATGTCCAGTGACTTAAGGTGTTCCTTGGCTTTTCCAAGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: FSISMRRQSVTSRGQ*MSSDLRCSLAFPSV Trigger: CACACTTGGAAAAGCCAAGGAACACCTTAAGTCACTGGACATCAACTGCCCCCGGGATGTGACTGACTGTCTCCTCATAGAGATGGAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026552.9 |
||
| CDS TCA 72 bp | ACAGTCAGTCACATCCCGGGGGCAGTTGATGTCCAGTaGCTTAAGGTGTTCCTTGGCTTTTCCAAGTGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: TVSHIPGAVDVQ*LKVFLGFSKCV Trigger: TACACACTTGGAAAAGCCAAGGAACACCTTAAGTCACTGGACATCAACTGCCCCCGGGATGTGACTGACTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026552.9 |
||
| CDS CAA 72 bp | TCTATGAGGAGACAGTCAGTCACATCCCGGGGGCAGTaGATGTCCAGTGACTTAAGGTGTTCCTTGGCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: SMRRQSVTSRGQ*MSSDLRCSLAF Trigger: AAAAGCCAAGGAACACCTTAAGTCACTGGACATCAACTGCCCCCGGGATGTGACTGACTGTCTCCTCATAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026552.9 |
||
| CDS CAA 72 bp | AAAAGGGAGTCCAGAGTTGGAATTACAACTGTACCCTaGGGGATGACATATCCTCGGAACACGGTGTCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: KRESRVGITTVP*GMTYPRNTVSR Trigger: CCGAGACACCGTGTTCCGAGGATATGTCATCCCCAAGGGTACAGTTGTAATTCCAACTCTGGACTCCCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 ENSMUST00000210235.2 |
||
| CDS CAA 72 bp | TCGAAGCGTTTGTTGAAGAGAATATCCGCAATGACATaGCAGGGTGCACAGCCAATCAGAAAGGTAGGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SKRLLKRISAMT*QGAQPIRKVGS Trigger: TGACCCTACCTTTCTGATTGGCTGTGCACCCTGCAATGTCATTGCGGATATTCTCTTCAACAAACGCTTCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS CAA 90 bp | GTCGGCCAAAGTCACAGAAATATTTTCCATTGTGTACATGGGTTCTaGGCTGTGTTTTTCCTGGATCCAGGGAGTACTCAGCAGGTAGAA | + |
|
Preference number: 6 (lower is better) Translates to: VGQSHRNIFHCVHGF*AVFFLDPGSTQQVE Trigger: TTCTACCTGCTGAGTACTCCCTGGATCCAGGAAAAACACAGCCAAGAACCCATGTACACAATGGAAAATATTTCTGTGACTTTGGCCGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209253.2 |
||
| CDS CAA 90 bp | TTCCTGCAAAGAACAGGTCGGCCAAAGTCACAGAAATATTTTCCATaGTGTACATGGGTTCTTGGCTGTGTTTTTCCTGGATCCAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: FLQRTGRPKSQKYFP*CTWVLGCVFPGSRE Trigger: CTCCCTGGATCCAGGAAAAACACAGCCAAGAACCCATGTACACAATGGAAAATATTTCTGTGACTTTGGCCGACCTGTTCTTTGCAGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209253.2 |
||
| CDS GCA 72 bp | TTTGTTGAAGAGAATATCCGCAATGACATTGCAGGGTaGACAGCCAATCAGAAAGGTAGGGTCAAAAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: FVEENIRNDIAG*TANQKGRVKRL Trigger: CAGCCTTTTGACCCTACCTTTCTGATTGGCTGTGCACCCTGCAATGTCATTGCGGATATTCTCTTCAACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 |
||
| CDS CCA 72 bp | CGGCCAAAGTCACAGAAATATTTTCCATTGTGTACATaGGTTCTTGGCTGTGTTTTTCCTGGATCCAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RPKSQKYFPLCT*VLGCVFPGSRE Trigger: CTCCCTGGATCCAGGAAAAACACAGCCAAGAACCCATGTACACAATGGAAAATATTTCTGTGACTTTGGCCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209253.2 |
||
| CDS CCA 72 bp | CTGGCCCGAAGCGCTTTGCCAACTTGGTTAAAGACTTaGGAATATCCTTCAAATCCAGCTGAAAAATGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LARSALPTWLKT*EYPSNPAEKCF Trigger: GAAACATTTTTCAGCTGGATTTGAAGGATATTCCCAAGTCTTTAACCAAGTTGGCAAAGCGCTTCGGGCCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026552.9 ENSMUST00000209253.2 ENSMUST00000210235.2 |
||
| CDS CCA 72 bp | GTCACAGAAATATTTTCCATTGTGTACATGGGTTCTTaGCTGTGTTTTTCCTGGATCCAGGGAGTACTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VTEIFSIVYMGS*LCFSWIQGVLS Trigger: GCTGAGTACTCCCTGGATCCAGGAAAAACACAGCCAAGAACCCATGTACACAATGGAAAATATTTCTGTGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209253.2 |
||
| CDS CAA 72 bp | AGTCACAGAAATATTTTCCATTGTGTACATGGGTTCTaGGCTGTGTTTTTCCTGGATCCAGGGAGTACTCAG | + |
|
Preference number: 6 (lower is better) Translates to: SHRNIFHCVHGF*AVFFLDPGSTQ Trigger: CTGAGTACTCCCTGGATCCAGGAAAAACACAGCCAAGAACCCATGTACACAATGGAAAATATTTCTGTGACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209253.2 |
||
| CDS CAA 72 bp | AGAACAGGTCGGCCAAAGTCACAGAAATATTTTCCATaGTGTACATGGGTTCTTGGCTGTGTTTTTCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: RTGRPKSQKYFP*CTWVLGCVFPG Trigger: TCCAGGAAAAACACAGCCAAGAACCCATGTACACAATGGAAAATATTTCTGTGACTTTGGCCGACCTGTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209253.2 |
||
| CDS CAA 90 bp | TTCCTGCAAAGAACAGGTCGGCCAAAGTCACAGAAATATTTTCCATaGTGTACATGGGTTCTTGGCTGTGTTTTTCCTTCTCCATCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: FLQRTGRPKSQKYFP*CTWVLGCVFPSPSL Trigger: TAGAGATGGAGAAGGAAAAACACAGCCAAGAACCCATGTACACAATGGAAAATATTTCTGTGACTTTGGCCGACCTGTTCTTTGCAGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026552.9 |
||
| CDS CAA 72 bp | AGAACAGGTCGGCCAAAGTCACAGAAATATTTTCCATaGTGTACATGGGTTCTTGGCTGTGTTTTTCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: RTGRPKSQKYFP*CTWVLGCVFPS Trigger: AGAAGGAAAAACACAGCCAAGAACCCATGTACACAATGGAAAATATTTCTGTGACTTTGGCCGACCTGTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026552.9 |
||
| CDS CAA 72 bp | AGTCACAGAAATATTTTCCATTGTGTACATGGGTTCTaGGCTGTGTTTTTCCTTCTCCATCTCTATGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SHRNIFHCVHGF*AVFFLLHLYEE Trigger: CTCCTCATAGAGATGGAGAAGGAAAAACACAGCCAAGAACCCATGTACACAATGGAAAATATTTCTGTGACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026552.9 |
||