Pregenerated sensors for CYP2D26 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022445Ensembl transcript IDs: ENSMUST00000006094.6, ENSMUST00000229387.2, ENSMUST00000229512.2
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AATGACCGCGTTTGTGTAGGGCATGCGGGCCTGGTCTGCCATCTCTaGATGCCGCACGTGCCCTATGACCTCGTCGATTTCCTGGTGGAC | + |
|
Preference number: 1 (lower is better) Translates to: NDRVCVGHAGLVCHL*MPHVPYDLVDFLVD Trigger: GTCCACCAGGAAATCGACGAGGTCATAGGGCACGTGCGGCATCCAGAGATGGCAGACCAGGCCCGCATGCCCTACACAAACGCGGTCATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229387.2 |
||
| 3UTR CCA 90 bp | GGAAGGCTTTATCAGGCAAACCAGGGATGTGTAGTAGCATTGGGATaGCATTCAGCACCTCTCCGACGAAGCCAGTGTCTTCTCCTAAGC | + |
|
Preference number: 1 (lower is better) Translates to: GRLYQANQGCVVALG*HSAPLRRSQCLLLS Trigger: GCTTAGGAGAAGACACTGGCTTCGTCGGAGAGGTGCTGAATGCCATCCCAATGCTACTACACATCCCTGGTTTGCCTGATAAAGCCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000229387.2 ENSMUST00000229512.2 |
||
| 3UTR CCA 90 bp | CTGCTATCGAGCCACTGCACAGAGCTGATAGGGCTCTGGAGTAACTaGCATTGTATAGATGCCATAATCACTGGGTCTGGGCTGTCCATC | + |
|
Preference number: 1 (lower is better) Translates to: LLSSHCTELIGLWSN*HCIDAIITGSGLSI Trigger: GATGGACAGCCCAGACCCAGTGATTATGGCATCTATACAATGCCAGTTACTCCAGAGCCCTATCAGCTCTGTGCAGTGGCTCGATAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229387.2 |
||
| 3UTR-3UTR CCA 90 bp | ACGTTGCTCACAGCTTTACTTAGGAGGGGGCTGGGATTGAAGGGATGTTCGGCCAAAGCATCGCAGAGGTaGCCAGCCTCCTCTGTCACC | + |
|
Preference number: 2 (lower is better) Translates to: TLLTALLRRGLGLKGCSAKASQR*PASSVT Trigger: GGTGACAGAGGAGGCTGGCCACCTCTGCGATGCTTT...GGCCGAACATCCCTTCAATCCCAGCCCCCTCCTAAGTAAAGCTGTGAGCAACGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000229387.2 ENSMUST00000229512.2 |
||
| 3UTR-3UTR GCA 90 bp | GCTTTACTTAGGAGGGGGCTGGGATTGAAGGGATGTTCGGCCTCCTTGGTGAAAGCTCCAGTGATTTCTTaGCCAGGCCGAAGTCACGCA | + |
|
Preference number: 2 (lower is better) Translates to: ALLRRGLGLKGCSASLVKAPVIS*PGRSHA Trigger: TGCGTGACTTCGGCCTGGGCAAGAAATCACTGGAGC...TTTCACCAAGGAGGCCGAACATCCCTTCAATCCCAGCCCCCTCCTAAGTAAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000229387.2 ENSMUST00000229512.2 |
||
| 3UTR CAA 90 bp | TTTATTGAACACCAATCAGGCCAAACTTGGGGGAAGGTAGGACCATaGCCCCTGCTATCGAGCCACTGCACAGAGCTGATAGGGCTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: FIEHQSGQTWGKVGP*PLLSSHCTELIGLW Trigger: CCAGAGCCCTATCAGCTCTGTGCAGTGGCTCGATAGCAGGGGCAATGGTCCTACCTTCCCCCAAGTTTGGCCTGATTGGTGTTCAATAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229387.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCGGGGTGGCTGTGCAGGATCCCAGGTCGAGTCGTGCTCAATTAACATCTTATCAATCAGGCCAAACTTaGGGGAAGGTAGGACCATTG | + |
|
Preference number: 2 (lower is better) Translates to: LGVAVQDPRSSRAQLTSYQSGQT*GKVGPL Trigger: CAATGGTCCTACCTTCCCCCAAGTTTGGCCTGATTG...ATAAGATGTTAATTGAGCACGACTCGACCTGGGATCCTGCACAGCCACCCCGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229387.2 |
||
| 3UTR-3UTR GCA 90 bp | AAATCTCGGGGTGGCTGTGCAGGATCCCAGGTCGAGTCGTGCTCAATTAACATCTCCCAGGTCGAGTCGTaGTCAATTAACATCTTATTC | + |
|
Preference number: 2 (lower is better) Translates to: KSRGGCAGSQVESCSINISQVES*SINILF Trigger: GAATAAGATGTTAATTGAGCACGACTCGACCTGGGA...GATGTTAATTGAGCACGACTCGACCTGGGATCCTGCACAGCCACCCCGAGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229387.2 ENSMUST00000229512.2 |
||
| 3UTR-3UTR CCA 90 bp | TTCAATGTTTTGAGCATCCTGTTGAAGAAAGGGTCTTCATACTCAAATCGACGAAAAGCATCGCAGAGGTaGCCAGCCTCCTCTGTCACC | + |
|
Preference number: 2 (lower is better) Translates to: FNVLSILLKKGSSYSNRRKASQR*PASSVT Trigger: GGTGACAGAGGAGGCTGGCCACCTCTGCGATGCTTT...TCGTCGATTTGAGTATGAAGACCCTTTCTTCAACAGGATGCTCAAAACATTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000229387.2 ENSMUST00000229512.2 |
||
| 3UTR CAA 90 bp | TCTCCGACGAAGCCAGTGTCTTCTCCTAAGCTTTCCTTCAATGTTTaGAGCATCCTGTTGAAGAAAGGGTCTTCATACTCAAATCGACGA | + |
|
Preference number: 2 (lower is better) Translates to: SPTKPVSSPKLSFNV*SILLKKGSSYSNRR Trigger: TCGTCGATTTGAGTATGAAGACCCTTTCTTCAACAGGATGCTCAAAACATTGAAGGAAAGCTTAGGAGAAGACACTGGCTTCGTCGGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000229387.2 ENSMUST00000229512.2 |
||
| 3UTR GCA 72 bp | ATGCGGGCCTGGTCTGCCATCTCTGGATGCCGCACGTaGCCTATGACCTCGTCGATTTCCTGGTGGACACGG | + |
|
Preference number: 3 (lower is better) Translates to: MRAWSAISGCRT*PMTSSISWWTR Trigger: CCGTGTCCACCAGGAAATCGACGAGGTCATAGGGCACGTGCGGCATCCAGAGATGGCAGACCAGGCCCGCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229387.2 |
||
| 3UTR GCA 72 bp | AATGACCGCGTTTGTGTAGGGCATGCGGGCCTGGTCTaGCATCTCTGGATGCCGCACGTGCCCTATGACCTC | + |
|
Preference number: 3 (lower is better) Translates to: NDRVCVGHAGLV*HLWMPHVPYDL Trigger: GAGGTCATAGGGCACGTGCGGCATCCAGAGATGGCAGACCAGGCCCGCATGCCCTACACAAACGCGGTCATT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229387.2 |
||
| 3UTR GCA 72 bp | CCTATGACCTCGTCGATTTCCTGGTGGACACGGCGCTaGACATCTGGATGCAGGATCATGAGCAGCAGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: PMTSSISWWTRR*TSGCRIMSSRA Trigger: GGCCCTGCTGCTCATGATCCTGCATCCAGATGTGCAGCGCCGTGTCCACCAGGAAATCGACGAGGTCATAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229387.2 |
||
| 3UTR CCA 72 bp | TGCCGCACGTGCCCTATGACCTCGTCGATTTCCTGGTaGACACGGCGCTGCACATCTGGATGCAGGATCATG | + |
|
Preference number: 3 (lower is better) Translates to: CRTCPMTSSISW*TRRCTSGCRIM Trigger: CATGATCCTGCATCCAGATGTGCAGCGCCGTGTCCACCAGGAAATCGACGAGGTCATAGGGCACGTGCGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229387.2 |
||
| 3UTR CCA 72 bp | GTTTGTGTAGGGCATGCGGGCCTGGTCTGCCATCTCTaGATGCCGCACGTGCCCTATGACCTCGTCGATTTC | + |
|
Preference number: 3 (lower is better) Translates to: VCVGHAGLVCHL*MPHVPYDLVDF Trigger: GAAATCGACGAGGTCATAGGGCACGTGCGGCATCCAGAGATGGCAGACCAGGCCCGCATGCCCTACACAAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229387.2 |
||
| 3UTR-3UTR CAA 90 bp | ACGTTGCTCACAGCTTTACTTAGGAGGGGGCTGGGATTGAAGGGATGTTCGGCCAGGAGGGGGCTGGGATaGAAGGGATGTTCGGCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: TLLTALLRRGLGLKGCSARRGLG*KGCSAS Trigger: GGAGGCCGAACATCCCTTCAATCCCAGCCCCCTCCT...GGCCGAACATCCCTTCAATCCCAGCCCCCTCCTAAGTAAAGCTGTGAGCAACGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000229387.2 ENSMUST00000229512.2 |
||
| 3UTR TCA 72 bp | GCCATAATCACTGGGTCTGGGCTGTCCATCGGGCACTaGGAAGCTAAAGCGCTGCAGGAGGCAGGTGAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: AIITGSGLSIGH*EAKALQEAGEE Trigger: TTCTTCACCTGCCTCCTGCAGCGCTTTAGCTTCTCAGTGCCCGATGGACAGCCCAGACCCAGTGATTATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229387.2 |
||
| 3UTR CCA 72 bp | TATCAGGCAAACCAGGGATGTGTAGTAGCATTGGGATaGCATTCAGCACCTCTCCGACGAAGCCAGTGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: YQANQGCVVALG*HSAPLRRSQCL Trigger: AAGACACTGGCTTCGTCGGAGAGGTGCTGAATGCCATCCCAATGCTACTACACATCCCTGGTTTGCCTGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000229387.2 ENSMUST00000229512.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTAAGCTTTCCTTCAATGTTTTGAGCATCCTGTTGAAGAAAGGGTCTTCATACAGGAGGGGGCTGGGATaGAAGGGATGTTCGGCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: PKLSFNVLSILLKKGSSYRRGLG*KGCSAS Trigger: GGAGGCCGAACATCCCTTCAATCCCAGCCCCCTCCT...GTATGAAGACCCTTTCTTCAACAGGATGCTCAAAACATTGAAGGAAAGCTTAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000229387.2 ENSMUST00000229512.2 |
||
| 3UTR GCA 72 bp | TCTCGGGGTGGCTGTGCAGGATCCCAGGTCGAGTCGTaGTCAATTAACATCTTATTCACTAAGGCTATGAAT | + |
|
Preference number: 3 (lower is better) Translates to: SRGGCAGSQVES*SINILFTKAMN Trigger: ATTCATAGCCTTAGTGAATAAGATGTTAATTGAGCACGACTCGACCTGGGATCCTGCACAGCCACCCCGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229387.2 ENSMUST00000229512.2 |
||
| 3UTR-3UTR CAA 90 bp | AAATCTCGGGGTGGCTGTGCAGGATCCCAGGTCGAGTCGTGCTCAATTAACATCCACAGAACTTGTTTATaGAACACCAATCAGGCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: KSRGGCAGSQVESCSINIHRTCL*NTNQAK Trigger: TTTGGCCTGATTGGTGTTCAATAAACAAGTTCTGTG...GATGTTAATTGAGCACGACTCGACCTGGGATCCTGCACAGCCACCCCGAGATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229387.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCAATGTTTTGAGCATCCTGTTGAAGAAAGGGTCTTCATACTCAAATCGACGACCAATCAGGCCAAACTaGGGGGAAGGTAGGACCATT | + |
|
Preference number: 3 (lower is better) Translates to: FNVLSILLKKGSSYSNRRPIRPN*GEGRTI Trigger: AATGGTCCTACCTTCCCCCAAGTTTGGCCTGATTGG...TCGTCGATTTGAGTATGAAGACCCTTTCTTCAACAGGATGCTCAAAACATTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229387.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTAAGCTTTCCTTCAATGTTTTGAGCATCCTGTTGAAGAAAGGGTCTTCATACGTTTTGAGCATCCTGTaGAAGAAAGGGTCTTCATAC | + |
|
Preference number: 3 (lower is better) Translates to: PKLSFNVLSILLKKGSSYVLSIL*KKGSSY Trigger: GTATGAAGACCCTTTCTTCAACAGGATGCTCAAAAC...GTATGAAGACCCTTTCTTCAACAGGATGCTCAAAACATTGAAGGAAAGCTTAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000229387.2 ENSMUST00000229512.2 |
||
| 3UTR TCA 72 bp | AGTCGTGCTCAATTAACATCTTATTCACTAAGGCTATaGATGAATTCAGCTTGGGGAAGGCTTTATCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: SRAQLTSYSLRL*MNSAWGRLYQA Trigger: TGCCTGATAAAGCCTTCCCCAAGCTGAATTCATTCATAGCCTTAGTGAATAAGATGTTAATTGAGCACGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229387.2 ENSMUST00000229512.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTAAGCTTTCCTTCAATGTTTTGAGCATCCTGTTGAAGAAAGGGTCTTCATACCTTTCCTTCAATGTTTaGAGCATCCTGTTGAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: PKLSFNVLSILLKKGSSYLSFNV*SILLKK Trigger: TTTCTTCAACAGGATGCTCAAAACATTGAAGGAAAG...GTATGAAGACCCTTTCTTCAACAGGATGCTCAAAACATTGAAGGAAAGCTTAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229387.2 ENSMUST00000229512.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCAATGTTTTGAGCATCCTGTTGAAGAAAGGGTCTTCATACTCAAATCGACGATTGCAGACACAGAACTaGTTTATTGAACACCAATCA | + |
|
Preference number: 3 (lower is better) Translates to: FNVLSILLKKGSSYSNRRLQTQN*FIEHQS Trigger: TGATTGGTGTTCAATAAACAAGTTCTGTGTCTGCAA...TCGTCGATTTGAGTATGAAGACCCTTTCTTCAACAGGATGCTCAAAACATTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229387.2 |
||
| CDS-3UTR CCA 90 bp | GGGATGGCATTCAGCACCTCTCCGACGAAGCCAGTGTCTTCTCCTAAGCTTTCCCAGGCAGTCCAGCGCTaGCGCCGGTGCACCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GMAFSTSPTKPVSSPKLSQAVQR*RRCTRS Trigger: GGACCTGGTGCACCGGCGCCAGCGCTGGACTGCCTG...GGAAAGCTTAGGAGAAGACACTGGCTTCGTCGGAGAGGTGCTGAATGCCATCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000229387.2 ENSMUST00000229512.2 |
||
| CDS-3UTR CCA 90 bp | AGGAGGGGGCTGGGATTGAAGGGATGTTCGGCCTCCTTGGTGAAAGCATCGCAGTGGCACAGGGCCTGGTaGGTAGCAGGCAGTCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: RRGLGLKGCSASLVKASQWHRAW*VAGSPA Trigger: CGCTGGACTGCCTGCTACCCACCAGGCCCTGTGCCA...CTGCGATGCTTTCACCAAGGAGGCCGAACATCCCTTCAATCCCAGCCCCCTCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000229387.2 ENSMUST00000229512.2 |
||
| CDS-3UTR CCA 90 bp | GGATGGCATTCAGCACCTCTCCGACGAAGCCAGTGTCTTCTCCTAAGCTTTCCTCAGGCAGTCCAGCGCTaGCGCCGGTGCACCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GWHSAPLRRSQCLLLSFPQAVQR*RRCTRS Trigger: GGACCTGGTGCACCGGCGCCAGCGCTGGACTGCCTG...AGGAAAGCTTAGGAGAAGACACTGGCTTCGTCGGAGAGGTGCTGAATGCCATCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000229387.2 ENSMUST00000229512.2 |
||
| 3UTR CAA 72 bp | AGGAGGGGGCTGGGATTGAAGGGATGTTCGGCCTCCTaGGTGAAAGCATCGCAGAGGTGGCCAGCCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RRGLGLKGCSAS*VKASQRWPASS Trigger: AGAGGAGGCTGGCCACCTCTGCGATGCTTTCACCAAGGAGGCCGAACATCCCTTCAATCCCAGCCCCCTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000229387.2 ENSMUST00000229512.2 |
||
| CDS-3UTR CCA 90 bp | GGGATGGCATTCAGCACCTCTCCGACGAAGCCAGTGTCTTCTCCTAAGCTTTCCGAATGGCACAGGGCCTaGTGGGTAGCAGGCAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GMAFSTSPTKPVSSPKLSEWHRA*WVAGSP Trigger: TGGACTGCCTGCTACCCACCAGGCCCTGTGCCATTC...GGAAAGCTTAGGAGAAGACACTGGCTTCGTCGGAGAGGTGCTGAATGCCATCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000229387.2 ENSMUST00000229512.2 |
||
| 3UTR CAA 72 bp | CACCAATCAGGCCAAACTTGGGGGAAGGTAGGACCATaGCCCCTGCTATCGAGCCACTGCACAGAGCTGATA | + |
|
Preference number: 4 (lower is better) Translates to: HQSGQTWGKVGP*PLLSSHCTELI Trigger: TATCAGCTCTGTGCAGTGGCTCGATAGCAGGGGCAATGGTCCTACCTTCCCCCAAGTTTGGCCTGATTGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000229387.2 |
||
| 3UTR CAA 72 bp | ACGTTGCTCACAGCTTTACTTAGGAGGGGGCTGGGATaGAAGGGATGTTCGGCCTCCTTGGTGAAAGCATCG | + |
|
Preference number: 4 (lower is better) Translates to: TLLTALLRRGLG*KGCSASLVKAS Trigger: CGATGCTTTCACCAAGGAGGCCGAACATCCCTTCAATCCCAGCCCCCTCCTAAGTAAAGCTGTGAGCAACGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000229387.2 ENSMUST00000229512.2 |
||
| CDS-3UTR CCA 90 bp | CCAGTGTCTTCTCCTAAGCTTTCCTTCAATGTTTTGAGCATCCTGTTGAAGAAATGGCACAGGGCCTGGTaGGTAGCAGGCAGTCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: PVSSPKLSFNVLSILLKKWHRAW*VAGSPA Trigger: CGCTGGACTGCCTGCTACCCACCAGGCCCTGTGCCA...TTTCTTCAACAGGATGCTCAAAACATTGAAGGAAAGCTTAGGAGAAGACACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229387.2 ENSMUST00000229512.2 |
||
| CDS-3UTR CCA 90 bp | AGGAGGGGGCTGGGATTGAAGGGATGTTCGGCCTCCTTGGTGAAAGCATCGCAGCTTGTAAAAGCTGTATaGTATGTTCTCGAAGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RRGLGLKGCSASLVKASQLVKAV*YVLEVH Trigger: GTGGACTTCGAGAACATACCATACAGCTTTTACAAG...CTGCGATGCTTTCACCAAGGAGGCCGAACATCCCTTCAATCCCAGCCCCCTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000229387.2 ENSMUST00000229512.2 |
||
| CDS-3UTR CCA 90 bp | CATTCAGCACCTCTCCGACGAAGCCAGTGTCTTCTCCTAAGCTTTCCTTCAATGCTTGTAAAAGCTGTATaGTATGTTCTCGAAGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HSAPLRRSQCLLLSFPSMLVKAV*YVLEVH Trigger: GTGGACTTCGAGAACATACCATACAGCTTTTACAAG...CATTGAAGGAAAGCTTAGGAGAAGACACTGGCTTCGTCGGAGAGGTGCTGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229387.2 ENSMUST00000229512.2 |
||
| 3UTR CAA 72 bp | TCTCCTAAGCTTTCCTTCAATGTTTTGAGCATCCTGTaGAAGAAAGGGTCTTCATACTCAAATCGACGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SPKLSFNVLSIL*KKGSSYSNRRA Trigger: TGCTCGTCGATTTGAGTATGAAGACCCTTTCTTCAACAGGATGCTCAAAACATTGAAGGAAAGCTTAGGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229387.2 ENSMUST00000229512.2 |
||
| 3UTR CAA 72 bp | AAGCCAGTGTCTTCTCCTAAGCTTTCCTTCAATGTTTaGAGCATCCTGTTGAAGAAAGGGTCTTCATACTCA | + |
|
Preference number: 4 (lower is better) Translates to: KPVSSPKLSFNV*SILLKKGSSYS Trigger: TGAGTATGAAGACCCTTTCTTCAACAGGATGCTCAAAACATTGAAGGAAAGCTTAGGAGAAGACACTGGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000229387.2 ENSMUST00000229512.2 |
||
| 3UTR CAA 72 bp | AACATCTTATTCACTAAGGCTATGAATGAATTCAGCTaGGGGAAGGCTTTATCAGGCAAACCAGGGATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NILFTKAMNEFS*GKALSGKPGMC Trigger: ACACATCCCTGGTTTGCCTGATAAAGCCTTCCCCAAGCTGAATTCATTCATAGCCTTAGTGAATAAGATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000229387.2 ENSMUST00000229512.2 |
||
| CDS CCA 90 bp | ACAACCACGGGCTTCCAGGCCATCTGTAGGCTTGTAAAAGCTGTATaGTATGTTCTCGAAGTCCACCTGCAGCAGGTTTCCCAGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TTTGFQAICRLVKAV*YVLEVHLQQVSQPR Trigger: CCTGGGCTGGGAAACCTGCTGCAGGTGGACTTCGAGAACATACCATACAGCTTTTACAAGCCTACAGATGGCCTGGAAGCCCGTGGTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229387.2 |
||
| CDS CCA 90 bp | GCTGAACACATTGCCATAGCGGTTTTGAAGCTTGTAAAAGCTGTATaGTATGTTCTCGAAGTCCACCTGCAGCAGGTTTCCCAGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AEHIAIAVLKLVKAV*YVLEVHLQQVSQPR Trigger: CCTGGGCTGGGAAACCTGCTGCAGGTGGACTTCGAGAACATACCATACAGCTTTTACAAGCTTCAAAACCGCTATGGCAATGTGTTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006094.6 ENSMUST00000229512.2 |
||
| CDS TCA 72 bp | AGGTCACCAGCAGTTCCCGCACTGCCTTCAGTCCGTTaGCCACAACCACGGGCTTCCAGGCCATCTGTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RSPAVPALPSVR*PQPRASRPSVG Trigger: GCCTACAGATGGCCTGGAAGCCCGTGGTTGTGGTCAACGGACTGAAGGCAGTGCGGGAACTGCTGGTGACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006094.6 ENSMUST00000229387.2 |
||
| CDS CCA 72 bp | GGCTTCCAGGCCATCTGTAGGCTTGTAAAAGCTGTATaGTATGTTCTCGAAGTCCACCTGCAGCAGGTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GFQAICRLVKAV*YVLEVHLQQVS Trigger: GGAAACCTGCTGCAGGTGGACTTCGAGAACATACCATACAGCTTTTACAAGCCTACAGATGGCCTGGAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229387.2 |
||
| CDS CCA 72 bp | ATTGCCATAGCGGTTTTGAAGCTTGTAAAAGCTGTATaGTATGTTCTCGAAGTCCACCTGCAGCAGGTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: IAIAVLKLVKAV*YVLEVHLQQVS Trigger: GGAAACCTGCTGCAGGTGGACTTCGAGAACATACCATACAGCTTTTACAAGCTTCAAAACCGCTATGGCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006094.6 ENSMUST00000229512.2 |
||