Pregenerated sensors for CYP2D22 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061740Ensembl transcript IDs: ENSMUST00000023083.9, ENSMUST00000228986.2
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCTTGCAGGTCCTACCAACCCTGGTTACAGAGGCACTTTCTTACTaGGCATGGGCCTGGACAACAGTATCCCTGTTGGGTCATGGAGTT | + |
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Preference number: 1 (lower is better) Translates to: SLQVLPTLVTEALSY*AWAWTTVSLLGHGV Trigger: AACTCCATGACCCAACAGGGATACTGTTGTCCAGGCCCATGCCCAGTAAGAAAGTGCCTCTGTAACCAGGGTTGGTAGGACCTGCAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| 3UTR CCA 90 bp | TCTGGGAGCCTGTTTCAACATCAAGCTTGCAGGTCCTACCAACCCTaGTTACAGAGGCACTTTCTTACTGGGCATGGGCCTGGACAACAG | + |
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Preference number: 1 (lower is better) Translates to: SGSLFQHQACRSYQP*LQRHFLTGHGPGQQ Trigger: CTGTTGTCCAGGCCCATGCCCAGTAAGAAAGTGCCTCTGTAACCAGGGTTGGTAGGACCTGCAAGCTTGATGTTGAAACAGGCTCCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| 3UTR CCA 90 bp | CAGGTCCTACCAACCCTGGTTACAGAGGCACTTTCTTACTGGGCATaGGCCTGGACAACAGTATCCCTGTTGGGTCATGGAGTTAGTGTT | + |
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Preference number: 1 (lower is better) Translates to: QVLPTLVTEALSYWA*AWTTVSLLGHGVSV Trigger: AACACTAACTCCATGACCCAACAGGGATACTGTTGTCCAGGCCCATGCCCAGTAAGAAAGTGCCTCTGTAACCAGGGTTGGTAGGACCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| 3UTR CCA 90 bp | CTACCAACCCTGGTTACAGAGGCACTTTCTTACTGGGCATGGGCCTaGACAACAGTATCCCTGTTGGGTCATGGAGTTAGTGTTGACAAA | + |
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Preference number: 1 (lower is better) Translates to: LPTLVTEALSYWAWA*TTVSLLGHGVSVDK Trigger: TTTGTCAACACTAACTCCATGACCCAACAGGGATACTGTTGTCCAGGCCCATGCCCAGTAAGAAAGTGCCTCTGTAACCAGGGTTGGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| 3UTR CCA 90 bp | CACTGTCACATCTTAGCAGTCCCTTCTGGCCATCCTTCCAGACGTTaGCATCTATGTATAAACATTATCAATTTGAGGGAAAAAGTGGGG | + |
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Preference number: 1 (lower is better) Translates to: HCHILAVPSGHPSRR*HLCINIINLREKVG Trigger: CCCCACTTTTTCCCTCAAATTGATAATGTTTATACATAGATGCCAACGTCTGGAAGGATGGCCAGAAGGGACTGCTAAGATGTGACAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| 3UTR-3UTR CCA 90 bp | ATTAGCTGGCTGGTGACAACACTGGGTGCTCAGAATCCCAGTATAGTCCTGAGCCTTTCTTACTGGGCATaGGCCTGGACAACAGTATCC | + |
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Preference number: 2 (lower is better) Translates to: ISWLVTTLGAQNPSIVLSLSYWA*AWTTVS Trigger: GGATACTGTTGTCCAGGCCCATGCCCAGTAAGAAAG...GCTCAGGACTATACTGGGATTCTGAGCACCCAGTGTTGTCACCAGCCAGCTAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| 3UTR-3UTR TCA 90 bp | CTAAGGTCTGAGGACTTTCTAAGGTCTGGGAGCCTGTTTCAACATCAAGCTTGCCCCCAGCAAGCACAGTaGGTGAGATGTCATACATCC | + |
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Preference number: 2 (lower is better) Translates to: LRSEDFLRSGSLFQHQACPQQAQ*VRCHTS Trigger: GGATGTATGACATCTCACTCACTGTGCTTGCTGGGG...GCAAGCTTGATGTTGAAACAGGCTCCCAGACCTTAGAAAGTCCTCAGACCTTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| 3UTR-3UTR CCA 90 bp | TTTCTAAGGTCTGGGAGCCTGTTTCAACATCAAGCTTGCAGGTCCTACCAACCCGGGCAGTCCTTCTACTaGGGTCAAATAGTCAAGTCA | + |
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Preference number: 2 (lower is better) Translates to: FLRSGSLFQHQACRSYQPGQSFY*GQIVKS Trigger: TGACTTGACTATTTGACCCCAGTAGAAGGACTGCCC...GGGTTGGTAGGACCTGCAAGCTTGATGTTGAAACAGGCTCCCAGACCTTAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| 3UTR-3UTR CCA 90 bp | CTAAGGTCTGAGGACTTTCTAAGGTCTGGGAGCCTGTTTCAACATCAAGCTTGCGTGGTAGGTCTGAAATaGGGGCATCTAGGAGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: LRSEDFLRSGSLFQHQACVVGLK*GHLGER Trigger: TCTCTCTCCTAGATGCCCCCATTTCAGACCTACCAC...GCAAGCTTGATGTTGAAACAGGCTCCCAGACCTTAGAAAGTCCTCAGACCTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| 3UTR-3UTR CCA 90 bp | AAGGGTAAAGGCAAGAATGGTATCATTTCTGACAGGGCAGTCCTTCTACTGGGGAATAAGCAGGGAAAGTaGATGCTCATGGGAAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: KGKGKNGIISDRAVLLLGNKQGK*MLMGRL Trigger: CAGCCTTCCCATGAGCATCCACTTTCCCTGCTTATT...CCCCAGTAGAAGGACTGCCCTGTCAGAAATGATACCATTCTTGCCTTTACCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| 3UTR-3UTR CCA 90 bp | TTTCTAAGGTCTGGGAGCCTGTTTCAACATCAAGCTTGCAGGTCCTACCAACCCGTAAACCCCTGCTTCTaGACTCCCTTAAAGCCTTTT | + |
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Preference number: 2 (lower is better) Translates to: FLRSGSLFQHQACRSYQPVNPCF*TPLKPF Trigger: AAAAGGCTTTAAGGGAGTCCAGAAGCAGGGGTTTAC...GGGTTGGTAGGACCTGCAAGCTTGATGTTGAAACAGGCTCCCAGACCTTAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| 3UTR-3UTR CCA 90 bp | CTAAGGTCTGAGGACTTTCTAAGGTCTGGGAGCCTGTTTCAACATCAAGCTTGCAGGTCCTACCAACCCTaGTTACAGAGGCACTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: LRSEDFLRSGSLFQHQACRSYQP*LQRHFL Trigger: AAGAAAGTGCCTCTGTAACCAGGGTTGGTAGGACCT...GCAAGCTTGATGTTGAAACAGGCTCCCAGACCTTAGAAAGTCCTCAGACCTTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| 3UTR-3UTR GCA 90 bp | GGGCCTGGACAACAGTATCCCTGTTGGGTCATGGAGTTAGTGTTGACAAAGAAGAGTAAAATGCTTTATTaGACATTAGGACCCCAGCAA | + |
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Preference number: 2 (lower is better) Translates to: GPGQQYPCWVMELVLTKKSKMLY*TLGPQQ Trigger: TTGCTGGGGTCCTAATGTGCAATAAAGCATTTTACT...CTTCTTTGTCAACACTAACTCCATGACCCAACAGGGATACTGTTGTCCAGGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| 3UTR-3UTR GCA 90 bp | GTCCTGAGCTGTACTCAGGGTGAGCTTTTACCAACAACTATATCATGTATTGACGAACTGCTGTCTATGTaGAGAGTTTTATGGTACTTC | + |
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Preference number: 2 (lower is better) Translates to: VLSCTQGELLPTTISCIDELLSM*RVLWYF Trigger: GAAGTACCATAAAACTCTGCACATAGACAGCAGTTC...GTCAATACATGATATAGTTGTTGGTAAAAGCTCACCCTGAGTACAGCTCAGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| 3UTR CCA 72 bp | CCAACCCTGGTTACAGAGGCACTTTCTTACTGGGCATaGGCCTGGACAACAGTATCCCTGTTGGGTCATGGA | + |
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Preference number: 3 (lower is better) Translates to: PTLVTEALSYWA*AWTTVSLLGHG Trigger: TCCATGACCCAACAGGGATACTGTTGTCCAGGCCCATGCCCAGTAAGAAAGTGCCTCTGTAACCAGGGTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| 3UTR CCA 72 bp | GTCCTACCAACCCTGGTTACAGAGGCACTTTCTTACTaGGCATGGGCCTGGACAACAGTATCCCTGTTGGGT | + |
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Preference number: 3 (lower is better) Translates to: VLPTLVTEALSY*AWAWTTVSLLG Trigger: ACCCAACAGGGATACTGTTGTCCAGGCCCATGCCCAGTAAGAAAGTGCCTCTGTAACCAGGGTTGGTAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| 3UTR CCA 72 bp | CTGGTTACAGAGGCACTTTCTTACTGGGCATGGGCCTaGACAACAGTATCCCTGTTGGGTCATGGAGTTAGT | + |
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Preference number: 3 (lower is better) Translates to: LVTEALSYWAWA*TTVSLLGHGVS Trigger: ACTAACTCCATGACCCAACAGGGATACTGTTGTCCAGGCCCATGCCCAGTAAGAAAGTGCCTCTGTAACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| 3UTR CCA 72 bp | CTGTTTCAACATCAAGCTTGCAGGTCCTACCAACCCTaGTTACAGAGGCACTTTCTTACTGGGCATGGGCCT | + |
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Preference number: 3 (lower is better) Translates to: LFQHQACRSYQP*LQRHFLTGHGP Trigger: AGGCCCATGCCCAGTAAGAAAGTGCCTCTGTAACCAGGGTTGGTAGGACCTGCAAGCTTGATGTTGAAACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| 3UTR CCA 72 bp | CTTACTGGGCATGGGCCTGGACAACAGTATCCCTGTTaGGTCATGGAGTTAGTGTTGACAAAGAAGCTTAGG | + |
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Preference number: 3 (lower is better) Translates to: LTGHGPGQQYPC*VMELVLTKKLR Trigger: CCTAAGCTTCTTTGTCAACACTAACTCCATGACCCAACAGGGATACTGTTGTCCAGGCCCATGCCCAGTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| 3UTR TCA 72 bp | TGGTACTTCCATCATGGACTCAGCTGTGCTAAGGTCTaGGGACTTTCTAAGGTCTGGGAGCCTGTTTCAACA | + |
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Preference number: 3 (lower is better) Translates to: WYFHHGLSCAKV*GLSKVWEPVST Trigger: TGTTGAAACAGGCTCCCAGACCTTAGAAAGTCCTCAGACCTTAGCACAGCTGAGTCCATGATGGAAGTACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| 3UTR CCA 72 bp | ATATCATTTCCAGCTTCCCGGACTTCTCTACATCTTTaGGGATGCCATATAAGACGTTGTGATGATGCTGGC | + |
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Preference number: 3 (lower is better) Translates to: ISFPASRTSLHL*GCHIRRCDDAG Trigger: GCCAGCATCATCACAACGTCTTATATGGCATCCCCAAAGATGTAGAGAAGTCCGGGAAGCTGGAAATGATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| 3UTR GCA 72 bp | GATGGATTAGGTCTTTGTTTTCATTATGACAGGAACTaGTGTCTATGTGCAGAGTTTTATGGTACTTCCATC | + |
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Preference number: 3 (lower is better) Translates to: DGLGLCFHYDRN*CLCAEFYGTSI Trigger: GATGGAAGTACCATAAAACTCTGCACATAGACAGCAGTTCCTGTCATAATGAAAACAAAGACCTAATCCATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| CDS-3UTR TCA 90 bp | ACCAACCCTGGTTACAGAGGCACTTTCTTACTGGGCATGGGCCTGGACAACAGTGAGAAGCGCCGCTGCTaGCGCCAGGCAGGCCCATAC | + |
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Preference number: 4 (lower is better) Translates to: TNPGYRGTFLLGMGLDNSEKRRC*RQAGPY Trigger: GTATGGGCCTGCCTGGCGTCAGCAGCGGCGCTTCTC...ACTGTTGTCCAGGCCCATGCCCAGTAAGAAAGTGCCTCTGTAACCAGGGTTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| CDS-3UTR CCA 90 bp | ACCAACCCTGGTTACAGAGGCACTTTCTTACTGGGCATGGGCCTGGACAACAGTAGACGCCATGGTCGCTaGGCTGGGGCTGTCCATCGG | + |
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Preference number: 4 (lower is better) Translates to: TNPGYRGTFLLGMGLDNSRRHGR*AGAVHR Trigger: CCGATGGACAGCCCCAGCCCAGCGACCATGGCGTCT...ACTGTTGTCCAGGCCCATGCCCAGTAAGAAAGTGCCTCTGTAACCAGGGTTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| CDS-3UTR CCA 90 bp | ATTAGCTGGCTGGTGACAACACTGGGTGCTCAGAATCCCAGTATAGTCCTGAGCTGGGCAGTCCAGCGCTaGCGCCAGTGCATCAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: ISWLVTTLGAQNPSIVLSWAVQR*RQCIRF Trigger: GAACCTGATGCACTGGCGCCAGCGCTGGACTGCCCA...GCTCAGGACTATACTGGGATTCTGAGCACCCAGTGTTGTCACCAGCCAGCTAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| CDS-3UTR CCA 90 bp | AGCTTGCAGGTCCTACCAACCCTGGTTACAGAGGCACTTTCTTACTGGGCATGGCGGCACAGAGGCATCTaGCCTCCTCAGTCACCCACT | + |
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Preference number: 4 (lower is better) Translates to: SLQVLPTLVTEALSYWAWRHRGI*PPQSPT Trigger: AGTGGGTGACTGAGGAGGCCAGATGCCTCTGTGCCG...CCATGCCCAGTAAGAAAGTGCCTCTGTAACCAGGGTTGGTAGGACCTGCAAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| CDS-3UTR TCA 90 bp | AGCTTGCAGGTCCTACCAACCCTGGTTACAGAGGCACTTTCTTACTGGGCATGGCTGGATGCAGGATCATaGGCATCAGGGCCCAGGACA | + |
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Preference number: 4 (lower is better) Translates to: SLQVLPTLVTEALSYWAWLDAGS*ASGPRT Trigger: TGTCCTGGGCCCTGATGCTCATGATCCTGCATCCAG...CCATGCCCAGTAAGAAAGTGCCTCTGTAACCAGGGTTGGTAGGACCTGCAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| CDS-3UTR GCA 90 bp | TCACATCTTAGCAGTCCCTTCTGGCCATCCTTCCAGACGTTGGCATCTATGTATCAACCAGCCCCGGGATaGGCAGGAGCATCGGGAACA | + |
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Preference number: 4 (lower is better) Translates to: SHLSSPFWPSFQTLASMYQPAPG*AGASGT Trigger: TGTTCCCGATGCTCCTGCGCATCCCGGGGCTGGTTG...ATACATAGATGCCAACGTCTGGAAGGATGGCCAGAAGGGACTGCTAAGATGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| CDS-3UTR CCA 90 bp | CTAAGGTCTGAGGACTTTCTAAGGTCTGGGAGCCTGTTTCAACATCAAGCTTGCGCCCTAAAGACGCCATaGTCGCTGGGCTGGGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: LRSEDFLRSGSLFQHQACALKTP*SLGWGC Trigger: ACAGCCCCAGCCCAGCGACCATGGCGTCTTTAGGGC...GCAAGCTTGATGTTGAAACAGGCTCCCAGACCTTAGAAAGTCCTCAGACCTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| CDS-3UTR GCA 90 bp | TGCTTCTGGACTCCCTTAAAGCCTTTTAGAGAAGCATGTGGTACCCAACAGGAACATGCGAGCCTGGTCTaGCATCTCTGGACACTGCAC | + |
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Preference number: 4 (lower is better) Translates to: CFWTPLKPFREACGTQQEHASLV*HLWTLH Trigger: GTGCAGTGTCCAGAGATGGCAGACCAGGCTCGCATG...TTCCTGTTGGGTACCACATGCTTCTCTAAAAGGCTTTAAGGGAGTCCAGAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| CDS-3UTR CCA 90 bp | GCCTGGACAACAGTATCCCTGTTGGGTCATGGAGTTAGTGTTGACAAAGAAGCTTCTCAGGATTCCCCTTaGCCTTCTCCACCTCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: AWTTVSLLGHGVSVDKEASQDSP*PSPPQP Trigger: TGGCTGAGGTGGAGAAGGCCAAGGGGAATCCTGAGA...AGCTTCTTTGTCAACACTAACTCCATGACCCAACAGGGATACTGTTGTCCAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| CDS-3UTR GCA 90 bp | AAGGGTAAAGGCAAGAATGGTATCATTTCTGACAGGGCAGTCCTTCTACTGGGGGCCATCTCTGGACACTaGACCTGCCCTATGACTTCA | + |
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Preference number: 4 (lower is better) Translates to: KGKGKNGIISDRAVLLLGAISGH*TCPMTS Trigger: TGAAGTCATAGGGCAGGTGCAGTGTCCAGAGATGGC...CCCCAGTAGAAGGACTGCCCTGTCAGAAATGATACCATTCTTGCCTTTACCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| CDS-3UTR CCA 90 bp | GCCTGGACAACAGTATCCCTGTTGGGTCATGGAGTTAGTGTTGACAAAGAAGCTCCTGCTGGCATATTCTaGAAGTCCATGTGCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: AWTTVSLLGHGVSVDKEAPAGIF*KSMCSR Trigger: CCTGCTGCACATGGACTTCCAGAATATGCCAGCAGG...AGCTTCTTTGTCAACACTAACTCCATGACCCAACAGGGATACTGTTGTCCAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| CDS-3UTR GCA 90 bp | AAAGGCAAGAATGGTATCATTTCTGACAGGGCAGTCCTTCTACTGGGGTCAAATCCCAGGCCAAAGTGGTaGATGGTAGACACAGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: KGKNGIISDRAVLLLGSNPRPKW*MVDTEK Trigger: CTTCTCTGTGTCTACCATGCACCACTTTGGCCTGGG...ATTTGACCCCAGTAGAAGGACTGCCCTGTCAGAAATGATACCATTCTTGCCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| CDS-3UTR GCA 90 bp | AGCAGTCCCTTCTGGCCATCCTTCCAGACGTTGGCATCTATGTATAAACATTATCGCTGCACATCTGGATaGAGGATCATGAGCATCAGG | + |
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Preference number: 4 (lower is better) Translates to: SSPFWPSFQTLASMYKHYRCTSG*RIMSIR Trigger: CCTGATGCTCATGATCCTGCATCCAGATGTGCAGCG...ATAATGTTTATACATAGATGCCAACGTCTGGAAGGATGGCCAGAAGGGACTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| CDS-3UTR CCA 90 bp | AAGGGTAAAGGCAAGAATGGTATCATTTCTGACAGGGCAGTCCTTCTACTGGGGCTTTTGGAAGCCTGCTaGCATATTCTGGAAGTCCAT | + |
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Preference number: 4 (lower is better) Translates to: KGKGKNGIISDRAVLLLGLLEAC*HILEVH Trigger: ATGGACTTCCAGAATATGCCAGCAGGCTTCCAAAAG...CCCCAGTAGAAGGACTGCCCTGTCAGAAATGATACCATTCTTGCCTTTACCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| CDS-3UTR GCA 90 bp | AGGGACTTTCCCAGAACTATGGAATTTGATGGATTAGGTCTTTGTTTTCATTATGCTCCAGTGACTTCTTaGCCAGGCCAAAGTGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: RDFPRTMEFDGLGLCFHYAPVTS*PGQSGA Trigger: TGCACCACTTTGGCCTGGGCAAGAAGTCACTGGAGC...ATAATGAAAACAAAGACCTAATCCATCAAATTCCATAGTTCTGGGAAAGTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| CDS CCA 90 bp | TTGAGAGCGTGGTCCAAAGCCCAGCAGGTCATTGAAATGCAGCGGTaGCCGGTCAGCAGTGTCCTCGCTGTGTTTCACCAGTGCCTCTCG | + |
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Preference number: 5 (lower is better) Translates to: LRAWSKAQQVIEMQR*PVSSVLAVFHQCLS Trigger: CGAGAGGCACTGGTGAAACACAGCGAGGACACTGCTGACCGGCCACCGCTGCATTTCAATGACCTGCTGGGCTTTGGACCACGCTCTCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023083.9 ENSMUST00000228986.2 |
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| CDS CCA 90 bp | CCCTATGACTTCATCGATTTCCTGTTGTACTCGGCCTTGAGAGCGTaGTCCAAAGCCCAGCAGGTCATTGAAATGCAGCGGTGGCCGGTC | + |
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Preference number: 5 (lower is better) Translates to: PYDFIDFLLYSALRA*SKAQQVIEMQRWPV Trigger: GACCGGCCACCGCTGCATTTCAATGACCTGCTGGGCTTTGGACCACGCTCTCAAGGCCGAGTACAACAGGAAATCGATGAAGTCATAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228986.2 |
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| CDS-3UTR CAA 90 bp | GCCAATAGAAGCTTTATTAGCTGGCTGGTGACAACACTGGGTGCTCAGAATCCCAAGCCCAGCAGGTCATaGAAATGCAGCGGTGGCCGG | + |
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Preference number: 5 (lower is better) Translates to: ANRSFISWLVTTLGAQNPKPSRS*KCSGGR Trigger: CCGGCCACCGCTGCATTTCAATGACCTGCTGGGCTT...GGGATTCTGAGCACCCAGTGTTGTCACCAGCCAGCTAATAAAGCTTCTATTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| CDS-3UTR CAA 90 bp | TTTCTAAGGTCTGGGAGCCTGTTTCAACATCAAGCTTGCAGGTCCTACCAACCCCTCTCAGGATTCCCCTaGGCCTTCTCCACCTCAGCC | + |
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Preference number: 5 (lower is better) Translates to: FLRSGSLFQHQACRSYQPLSGFP*AFSTSA Trigger: GGCTGAGGTGGAGAAGGCCAAGGGGAATCCTGAGAG...GGGTTGGTAGGACCTGCAAGCTTGATGTTGAAACAGGCTCCCAGACCTTAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| CDS TCA 72 bp | GCCATGGTCGCTGGGCTGGGGCTGTCCATCGGGCACTaGGATGCTAAAGCGCTGCAGGAGGCAGGTGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: AMVAGLGLSIGH*DAKALQEAGEE Trigger: TTCTTCACCTGCCTCCTGCAGCGCTTTAGCATCTCAGTGCCCGATGGACAGCCCCAGCCCAGCGACCATGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| CDS CAA 72 bp | AACATGGTAACAAAGGCCCTTTTCCCAGGGAAGACCTaGCCAACCAGCCCCGGGATGCGCAGGAGCATCGGG | + |
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Preference number: 6 (lower is better) Translates to: NMVTKALFPGKT*PTSPGMRRSIG Trigger: CCCGATGCTCCTGCGCATCCCGGGGCTGGTTGGCAAGGTCTTCCCTGGGAAAAGGGCCTTTGTTACCATGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| CDS TCA 72 bp | AAGTGGTGCATGGTAGACACAGAGAAGCGCCGCTGCTaGCGCCAGGCAGGCCCATACCGTGCTAGGACTATA | + |
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Preference number: 6 (lower is better) Translates to: KWCMVDTEKRRC*RQAGPYRARTI Trigger: TATAGTCCTAGCACGGTATGGGCCTGCCTGGCGTCAGCAGCGGCGCTTCTCTGTGTCTACCATGCACCACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| CDS CCA 72 bp | CGACCCCGCAGCTTTTGGAAGCCTGCTGGCATATTCTaGAAGTCCATGTGCAGCAGGTTCCCAAGCACAGGC | + |
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Preference number: 6 (lower is better) Translates to: RPRSFWKPAGIF*KSMCSRFPSTG Trigger: GCCTGTGCTTGGGAACCTGCTGCACATGGACTTCCAGAATATGCCAGCAGGCTTCCAAAAGCTGCGGGGTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023083.9 ENSMUST00000228986.2 |
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| CDS CCA 72 bp | TGGTCCAAAGCCCAGCAGGTCATTGAAATGCAGCGGTaGCCGGTCAGCAGTGTCCTCGCTGTGTTTCACCAG | + |
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Preference number: 6 (lower is better) Translates to: WSKAQQVIEMQR*PVSSVLAVFHQ Trigger: CTGGTGAAACACAGCGAGGACACTGCTGACCGGCCACCGCTGCATTTCAATGACCTGCTGGGCTTTGGACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023083.9 ENSMUST00000228986.2 |
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| CDS CAA 90 bp | AGCTCATCCAACATGGTAACAAAGGCCCTTTTCCCAGGGAAGACCTaGCCAACCAGCCCCGGGATGCGCAGGAGCATCGGGAACACATTC | + |
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Preference number: 6 (lower is better) Translates to: SSSNMVTKALFPGKT*PTSPGMRRSIGNTF Trigger: GAATGTGTTCCCGATGCTCCTGCGCATCCCGGGGCTGGTTGGCAAGGTCTTCCCTGGGAAAAGGGCCTTTGTTACCATGTTGGATGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| CDS TCA 72 bp | CGCCAGGCAGGCCCATACCGTGCTAGGACTATACCTTaGGAGCGTGGTCCAAAGCCCAGCAGGTCATTGAAA | + |
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Preference number: 6 (lower is better) Translates to: RQAGPYRARTIP*ERGPKPSRSLK Trigger: TTTCAATGACCTGCTGGGCTTTGGACCACGCTCTCAAGGTATAGTCCTAGCACGGTATGGGCCTGCCTGGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| CDS GCA 72 bp | TTTTGGAAGCCTGCTGGCATATTCTGGAAGTCCATGTaGAGCAGGTTCCCAAGCACAGGCCACGGCATAGGG | + |
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Preference number: 6 (lower is better) Translates to: FWKPAGIFWKSM*SRFPSTGHGIG Trigger: CCCTATGCCGTGGCCTGTGCTTGGGAACCTGCTGCACATGGACTTCCAGAATATGCCAGCAGGCTTCCAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023083.9 ENSMUST00000228986.2 |
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| CDS CAA 72 bp | TCCCAGACAGTCTCATCTTTTAGCGCGGAGGACAGGTaGGTGATGAGGGTCGTCCCCTTAGGGATAAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: SQTVSSFSAEDR*VMRVVPLGIRK Trigger: CTTCCTTATCCCTAAGGGGACGACCCTCATCACCAACCTGTCCTCCGCGCTAAAAGATGAGACTGTCTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023083.9 ENSMUST00000228986.2 |
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| CDS GCA 72 bp | CCTATGACTTCATCGATTTCCTGTTGTACTCGGCGCTaGACATCTGGATGCAGGATCATGAGCATCAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: PMTSSISCCTRR*TSGCRIMSIRA Trigger: GGCCCTGATGCTCATGATCCTGCATCCAGATGTGCAGCGCCGAGTACAACAGGAAATCGATGAAGTCATAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023083.9 |
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| CDS CCA 72 bp | TTCATCGATTTCCTGTTGTACTCGGCCTTGAGAGCGTaGTCCAAAGCCCAGCAGGTCATTGAAATGCAGCGG | + |
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Preference number: 6 (lower is better) Translates to: FIDFLLYSALRA*SKAQQVIEMQR Trigger: CCGCTGCATTTCAATGACCTGCTGGGCTTTGGACCACGCTCTCAAGGCCGAGTACAACAGGAAATCGATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228986.2 |
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| CDS CAA 72 bp | CCCTATGACTTCATCGATTTCCTGTTGTACTCGGCCTaGAGAGCGTGGTCCAAAGCCCAGCAGGTCATTGAA | + |
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Preference number: 6 (lower is better) Translates to: PYDFIDFLLYSA*RAWSKAQQVIE Trigger: TTCAATGACCTGCTGGGCTTTGGACCACGCTCTCAAGGCCGAGTACAACAGGAAATCGATGAAGTCATAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228986.2 |
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| CDS TCA 72 bp | CCTATGACTTCATCGATTTCCTGTTGTACTCGGCCTTaGGAGCGTGGTCCAAAGCCCAGCAGGTCATTGAAA | + |
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Preference number: 6 (lower is better) Translates to: PMTSSISCCTRP*ERGPKPSRSLK Trigger: TTTCAATGACCTGCTGGGCTTTGGACCACGCTCTCAAGGCCGAGTACAACAGGAAATCGATGAAGTCATAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228986.2 |
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