Pregenerated sensors for CYP2D12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096852Ensembl transcript IDs: ENSMUST00000068861.8, ENSMUST00000228974.2, ENSMUST00000229103.2, ENSMUST00000229904.2
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGTTTTCAGTCAACAGGTTATCCACTATGGCGATGAAGGACTTCTaGCTTTGCAGGAACTTGTCAGCCAGCCTTGGGATGTGCAGGAGT | + |
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Preference number: 1 (lower is better) Translates to: LFSVNRLSTMAMKDF*LCRNLSASLGMCRS Trigger: ACTCCTGCACATCCCAAGGCTGGCTGACAAGTTCCTGCAAAGTCAGAAGTCCTTCATCGCCATAGTGGATAACCTGTTGACTGAAAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228974.2 |
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| 3UTR-3UTR TCA 90 bp | GTACTGCCCAGCCTGAGTAGTGAAGGCATCACAGAGGTGGCCGGCCTCCTTGATCTTGGGATCTGGGCTTaGAACCAAGATGCTCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: VLPSLSSEGITEVAGLLDLGIWA*NQDAQR Trigger: TCTTTGAGCATCTTGGTTTCAAGCCCAGATCCCAAG...ATCAAGGAGGCCGGCCACCTCTGTGATGCCTTCACTACTCAGGCTGGGCAGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228974.2 |
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| 3UTR-3UTR GCA 90 bp | GTACTGCCCAGCCTGAGTAGTGAAGGCATCACAGAGGTGGCCGGCCTCCTTGATTGCCCAGGCCAAAATTaGGCAGAGAAGACAAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: VLPSLSSEGITEVAGLLDCPGQN*AEKTKR Trigger: TCTCTTTGTCTTCTCTGCGCAATTTTGGCCTGGGCA...ATCAAGGAGGCCGGCCACCTCTGTGATGCCTTCACTACTCAGGCTGGGCAGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228974.2 |
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| 3UTR-3UTR CCA 90 bp | TTCAGTCAACAGGTTATCCACTATGGCGATGAAGGACTTCTGACTTTGCAGGAAAAGGCATCACAGAGGTaGCCGGCCTCCTTGATCACC | + |
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Preference number: 2 (lower is better) Translates to: FSQQVIHYGDEGLLTLQEKASQR*PASLIT Trigger: GGTGATCAAGGAGGCCGGCCACCTCTGTGATGCCTT...TTCCTGCAAAGTCAGAAGTCCTTCATCGCCATAGTGGATAACCTGTTGACTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228974.2 |
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| 3UTR-3UTR TCA 90 bp | GAGTTCTGTCAAACTATCTTCCAGTACTTTCAGCATCCTGATGAGGTAAGGGTCGCATGGTGTTGGGATTaGTGTACTGCCCAGCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: EFCQTIFQYFQHPDEVRVAWCWD*CTAQPE Trigger: CTCAGGCTGGGCAGTACATCAATCCCAACACCATGC...GACCCTTACCTCATCAGGATGCTGAAAGTACTGGAAGATAGTTTGACAGAACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228974.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTCCAGAGATTTCCTGCCCAGGCCAAAATTGCGCAGAGAAGACAAAGAGAATCTCAGGTCCATAGGGTaGAAAGATCATACCTTGGGA | + |
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Preference number: 2 (lower is better) Translates to: SSRDFLPRPKLRREDKENLRSIG*KDHTLG Trigger: TCCCAAGGTATGATCTTTGCACCCTATGGACCTGAG...ATTCTCTTTGTCTTCTCTGCGCAATTTTGGCCTGGGCAGGAAATCTCTGGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228974.2 |
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| 3UTR TCA 72 bp | TTCAGCATGGTGTTGGGATTGATGTACTGCCCAGCCTaGGTAGTGAAGGCATCACAGAGGTGGCCGGCCTCC | + |
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Preference number: 3 (lower is better) Translates to: FSMVLGLMYCPA*VVKASQRWPAS Trigger: GGAGGCCGGCCACCTCTGTGATGCCTTCACTACTCAGGCTGGGCAGTACATCAATCCCAACACCATGCTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228974.2 |
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| 3UTR CCA 72 bp | CAGTCAAATTTCGGGGTGACTGGGCAGGGTCCCAAGTaGTCCTGTTTTCAGTCAACAGGTTATCCACTATGG | + |
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Preference number: 3 (lower is better) Translates to: QSNFGVTGQGPK*SCFQSTGYPLW Trigger: CCATAGTGGATAACCTGTTGACTGAAAACAGGACCACTTGGGACCCTGCCCAGTCACCCCGAAATTTGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228974.2 |
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| 3UTR-3UTR CAA 90 bp | ACCCACTCCTCCAGAGATTTCCTGCCCAGGCCAAAATTGCGCAGAGAAGACAAATGCAAAGATCATACCTaGGGATCTGGGCTTGAAACC | + |
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Preference number: 3 (lower is better) Translates to: THSSRDFLPRPKLRREDKCKDHT*GSGLET Trigger: GGTTTCAAGCCCAGATCCCAAGGTATGATCTTTGCA...TTTGTCTTCTCTGCGCAATTTTGGCCTGGGCAGGAAATCTCTGGAGGAGTGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228974.2 |
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| 3UTR-3UTR CAA 90 bp | TTCAGTCAACAGGTTATCCACTATGGCGATGAAGGACTTCTGACTTTGCAGGAACTGCCCAGGCCAAAATaGCGCAGAGAAGACAAAGAG | + |
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Preference number: 3 (lower is better) Translates to: FSQQVIHYGDEGLLTLQELPRPK*RREDKE Trigger: CTCTTTGTCTTCTCTGCGCAATTTTGGCCTGGGCAG...TTCCTGCAAAGTCAGAAGTCCTTCATCGCCATAGTGGATAACCTGTTGACTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228974.2 |
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| 3UTR-3UTR CAA 90 bp | TTCAGTCAACAGGTTATCCACTATGGCGATGAAGGACTTCTGACTTTGCAGGAACCTTGGGATCTGGGCTaGAAACCAAGATGCTCAAAG | + |
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Preference number: 3 (lower is better) Translates to: FSQQVIHYGDEGLLTLQEPWDLG*KPRCSK Trigger: CTTTGAGCATCTTGGTTTCAAGCCCAGATCCCAAGG...TTCCTGCAAAGTCAGAAGTCCTTCATCGCCATAGTGGATAACCTGTTGACTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228974.2 |
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| CDS-3UTR CCA 90 bp | AAGGCATCACAGAGGTGGCCGGCCTCCTTGATCACCCACTCCTCCAGAGATTTCCAAGAAGTCCAGCTCTaGCGCCGGTGCATCAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: KASQRWPASLITHSSRDFQEVQL*RRCIRS Trigger: GGACCTGATGCACCGGCGCCAGAGCTGGACTTCTTG...GAAATCTCTGGAGGAGTGGGTGATCAAGGAGGCCGGCCACCTCTGTGATGCCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228974.2 |
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| CDS-3UTR CCA 90 bp | AAGGCATCACAGAGGTGGCCGGCCTCCTTGATCACCCACTCCTCCAGAGATTTCTGGCACAGGGCCTGGTaGGTAGCAAGAAGTCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: KASQRWPASLITHSSRDFWHRAW*VARSPA Trigger: AGCTGGACTTCTTGCTACCCACCAGGCCCTGTGCCA...GAAATCTCTGGAGGAGTGGGTGATCAAGGAGGCCGGCCACCTCTGTGATGCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228974.2 |
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| CDS-3UTR TCA 90 bp | CACAAGACTAGTTTATTCTACATGACACAGCCTTCCCTGCAGAGCCTGTATGGAGGTGGCCGGCCTCCTTaGTCACCCACTCCTCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: HKTSLFYMTQPSLQSLYGGGRPP*SPTPPE Trigger: CTCTGGAGGAGTGGGTGATCAAGGAGGCCGGCCACC...TCCATACAGGCTCTGCAGGGAAGGCTGTGTCATGTAGAATAAACTAGTCTTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068861.8 |
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| CDS-3UTR TCA 90 bp | AGCAGCAACCACAAGACTAGTTTATTCTACATGACACAGCCTTCCCTGCAGAGCGCATGGTGTTGGGATTaGTGTACTGCCCAGCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: SSNHKTSLFYMTQPSLQSAWCWD*CTAQPE Trigger: CTCAGGCTGGGCAGTACATCAATCCCAACACCATGC...GCTCTGCAGGGAAGGCTGTGTCATGTAGAATAAACTAGTCTTGTGGTTGCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068861.8 |
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| CDS-3UTR CCA 90 bp | GAAAACAGCAGCAACCACAAGACTAGTTTATTCTACATGACACAGCCTTCCCTGCAAGAAGTCCAGCTCTaGCGCCGGTGCATCAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: ENSSNHKTSLFYMTQPSLQEVQL*RRCIRS Trigger: GGACCTGATGCACCGGCGCCAGAGCTGGACTTCTTG...CAGGGAAGGCTGTGTCATGTAGAATAAACTAGTCTTGTGGTTGCTGCTGTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068861.8 |
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| CDS-3UTR TCA 90 bp | CACAAGACTAGTTTATTCTACATGACACAGCCTTCCCTGCAGAGCCTGTATGGAAGTCAAATTTCGGGGTaGCTGGGCAGGGTCCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: HKTSLFYMTQPSLQSLYGSQISG*LGRVPS Trigger: ACTTGGGACCCTGCCCAGTCACCCCGAAATTTGACT...TCCATACAGGCTCTGCAGGGAAGGCTGTGTCATGTAGAATAAACTAGTCTTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068861.8 |
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| CDS-3UTR CCA 90 bp | AACCACAAGACTAGTTTATTCTACATGACACAGCCTTCCCTGCAGAGCCTGTATCTCAAAGATGGGCACTaGAGGGCGGTCAGCAGTGTC | + |
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Preference number: 4 (lower is better) Translates to: NHKTSLFYMTQPSLQSLYLKDGH*RAVSSV Trigger: GACACTGCTGACCGCCCTCCAGTGCCCATCTTTGAG...ATACAGGCTCTGCAGGGAAGGCTGTGTCATGTAGAATAAACTAGTCTTGTGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068861.8 |
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| CDS-3UTR CCA 90 bp | GCAGAAAACAGCAGCAACCACAAGACTAGTTTATTCTACATGACACAGCCTTCCAAGGCATCACAGAGGTaGCCGGCCTCCTTGATCACC | + |
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Preference number: 4 (lower is better) Translates to: AENSSNHKTSLFYMTQPSKASQR*PASLIT Trigger: GGTGATCAAGGAGGCCGGCCACCTCTGTGATGCCTT...GGAAGGCTGTGTCATGTAGAATAAACTAGTCTTGTGGTTGCTGCTGTTTTCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068861.8 |
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| CDS-3UTR CCA 90 bp | AGCAACCACAAGACTAGTTTATTCTACATGACACAGCCTTCCCTGCAGAGCCTGGGGCAGGGTCCCAAGTaGTCCTGTTTTCAGTCAACA | + |
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Preference number: 4 (lower is better) Translates to: SNHKTSLFYMTQPSLQSLGQGPK*SCFQST Trigger: TGTTGACTGAAAACAGGACCACTTGGGACCCTGCCC...CAGGCTCTGCAGGGAAGGCTGTGTCATGTAGAATAAACTAGTCTTGTGGTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068861.8 |
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| CDS-3UTR CCA 90 bp | CACAAGACTAGTTTATTCTACATGACACAGCCTTCCCTGCAGAGCCTGTATGGAAGACTCTATGGTCACTaGGCTGGGGCTGTCCATCAG | + |
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Preference number: 4 (lower is better) Translates to: HKTSLFYMTQPSLQSLYGRLYGH*AGAVHQ Trigger: CTGATGGACAGCCCCAGCCCAGTGACCATAGAGTCT...TCCATACAGGCTCTGCAGGGAAGGCTGTGTCATGTAGAATAAACTAGTCTTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068861.8 |
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| CDS-3UTR GCA 90 bp | CTGACTTTGCAGGAACTTGTCAGCCAGCCTTGGGATGTGCAGGAGTATCGGGAACAGCACTTCCTTCATTaGCTTCATTCTGTTGATCAC | + |
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Preference number: 4 (lower is better) Translates to: LTLQELVSQPWDVQEYREQHFLH*LHSVDH Trigger: GTGATCAACAGAATGAAGGCAATGAAGGAAGTGCTG...TTCCCGATACTCCTGCACATCCCAAGGCTGGCTGACAAGTTCCTGCAAAGTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228974.2 |
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| CDS-3UTR CCA 90 bp | GAAAACAGCAGCAACCACAAGACTAGTTTATTCTACATGACACAGCCTTCCCTGCTTGTCAGCCAGCCTTaGGATGTGCAGGAGTATCGG | + |
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Preference number: 4 (lower is better) Translates to: ENSSNHKTSLFYMTQPSLLVSQP*DVQEYR Trigger: CCGATACTCCTGCACATCCCAAGGCTGGCTGACAAG...CAGGGAAGGCTGTGTCATGTAGAATAAACTAGTCTTGTGGTTGCTGCTGTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068861.8 |
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| CDS-3UTR GCA 90 bp | AGCAGCAACCACAAGACTAGTTTATTCTACATGACACAGCCTTCCCTGCAGAGCTGCCCAGGCCAAAATTaGGCAGAGAAGACAAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: SSNHKTSLFYMTQPSLQSCPGQN*AEKTKR Trigger: TCTCTTTGTCTTCTCTGCGCAATTTTGGCCTGGGCA...GCTCTGCAGGGAAGGCTGTGTCATGTAGAATAAACTAGTCTTGTGGTTGCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068861.8 |
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| CDS-3UTR GCA 90 bp | GCAGAAAACAGCAGCAACCACAAGACTAGTTTATTCTACATGACACAGCCTTCCCCTCCAGAGATTTCCTaGCCAGGCCAAAATTGCGCA | + |
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Preference number: 4 (lower is better) Translates to: AENSSNHKTSLFYMTQPSPPEIS*PGQNCA Trigger: TGCGCAATTTTGGCCTGGGCAGGAAATCTCTGGAGG...GGAAGGCTGTGTCATGTAGAATAAACTAGTCTTGTGGTTGCTGCTGTTTTCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068861.8 |
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| CDS-3UTR CCA 90 bp | AAAGCAGAAAACAGCAGCAACCACAAGACTAGTTTATTCTACATGACACAGCCTTGGCACAGGGCCTGGTaGGTAGCAAGAAGTCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: KAENSSNHKTSLFYMTQPWHRAW*VARSPA Trigger: AGCTGGACTTCTTGCTACCCACCAGGCCCTGTGCCA...AGGCTGTGTCATGTAGAATAAACTAGTCTTGTGGTTGCTGCTGTTTTCTGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068861.8 |
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| CDS-3UTR CCA 90 bp | AAAGCAGAAAACAGCAGCAACCACAAGACTAGTTTATTCTACATGACACAGCCTCAAGATGCTCAAAGATaGGCACTGGAGGGCGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: KAENSSNHKTSLFYMTQPQDAQR*ALEGGQ Trigger: CTGACCGCCCTCCAGTGCCCATCTTTGAGCATCTTG...AGGCTGTGTCATGTAGAATAAACTAGTCTTGTGGTTGCTGCTGTTTTCTGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068861.8 |
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| CDS-3UTR CCA 90 bp | CACAAGACTAGTTTATTCTACATGACACAGCCTTCCCTGCAGAGCCTGTATGGATCTCAGGATTTCCCTTaGCCTTCTCTATCTCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: HKTSLFYMTQPSLQSLYGSQDFP*PSLSLP Trigger: TGGCAGAGATAGAGAAGGCCAAGGGAAATCCTGAGA...TCCATACAGGCTCTGCAGGGAAGGCTGTGTCATGTAGAATAAACTAGTCTTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068861.8 |
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| CDS-3UTR CCA 90 bp | AGCAACCACAAGACTAGTTTATTCTACATGACACAGCCTTCCCTGCAGAGCCTGTCATCGATTTCTTGTTaGACTCTGCGCTGCACATCT | + |
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Preference number: 4 (lower is better) Translates to: SNHKTSLFYMTQPSLQSLSSISC*TLRCTS Trigger: AGATGTGCAGCGCAGAGTCCAACAAGAAATCGATGA...CAGGCTCTGCAGGGAAGGCTGTGTCATGTAGAATAAACTAGTCTTGTGGTTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068861.8 |
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| CDS-3UTR CCA 90 bp | GTTAAAGCAGAAAACAGCAGCAACCACAAGACTAGTTTATTCTACATGACACAGGCACAGAGGACATGTTaGGGAGGAGGATCGTCCCCT | + |
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Preference number: 4 (lower is better) Translates to: VKAENSSNHKTSLFYMTQAQRTC*GGGSSP Trigger: AGGGGACGATCCTCCTCCCCAACATGTCCTCTGTGC...CTGTGTCATGTAGAATAAACTAGTCTTGTGGTTGCTGCTGTTTTCTGCTTTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068861.8 |
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| CDS-3UTR TCA 90 bp | GCAGAAAACAGCAGCAACCACAAGACTAGTTTATTCTACATGACACAGCCTTCCCTTGGGATCTGGGCTTaGAACCAAGATGCTCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: AENSSNHKTSLFYMTQPSLGIWA*NQDAQR Trigger: TCTTTGAGCATCTTGGTTTCAAGCCCAGATCCCAAG...GGAAGGCTGTGTCATGTAGAATAAACTAGTCTTGTGGTTGCTGCTGTTTTCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068861.8 |
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| CDS-3UTR TCA 90 bp | GCAGAAAACAGCAGCAACCACAAGACTAGTTTATTCTACATGACACAGCCTTCCTCAGAATCCCTGCAGTaGACAGGTCTATTACCACCA | + |
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Preference number: 4 (lower is better) Translates to: AENSSNHKTSLFYMTQPSSESLQ*TGLLPP Trigger: TGGTGGTAATAGACCTGTTCACTGCAGGGATTCTGA...GGAAGGCTGTGTCATGTAGAATAAACTAGTCTTGTGGTTGCTGCTGTTTTCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068861.8 |
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| CDS-3UTR GCA 90 bp | GAAAACAGCAGCAACCACAAGACTAGTTTATTCTACATGACACAGCCTTCCCTGCTCAGGTCCATAGGGTaGAAAGATCATACCTTGGGA | + |
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Preference number: 4 (lower is better) Translates to: ENSSNHKTSLFYMTQPSLLRSIG*KDHTLG Trigger: TCCCAAGGTATGATCTTTGCACCCTATGGACCTGAG...CAGGGAAGGCTGTGTCATGTAGAATAAACTAGTCTTGTGGTTGCTGCTGTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068861.8 |
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| CDS-3UTR GCA 90 bp | AAAGCAGAAAACAGCAGCAACCACAAGACTAGTTTATTCTACATGACACAGCCTCCCCCAGGCATGATCTaGGGCCTGCTGAAAATGTTA | + |
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Preference number: 4 (lower is better) Translates to: KAENSSNHKTSLFYMTQPPPGMI*GLLKML Trigger: TAACATTTTCAGCAGGCCGCAGATCATGCCTGGGGG...AGGCTGTGTCATGTAGAATAAACTAGTCTTGTGGTTGCTGCTGTTTTCTGCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068861.8 |
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| CDS-3UTR GCA 90 bp | AACCACAAGACTAGTTTATTCTACATGACACAGCCTTCCCTGCAGAGCCTGTATCAGCACTTCCTTCATTaGCTTCATTCTGTTGATCAC | + |
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Preference number: 4 (lower is better) Translates to: NHKTSLFYMTQPSLQSLYQHFLH*LHSVDH Trigger: GTGATCAACAGAATGAAGGCAATGAAGGAAGTGCTG...ATACAGGCTCTGCAGGGAAGGCTGTGTCATGTAGAATAAACTAGTCTTGTGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068861.8 |
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| CDS-3UTR GCA 90 bp | GCAGAAAACAGCAGCAACCACAAGACTAGTTTATTCTACATGACACAGCCTTCCGGCAAAAATGAGAGATaGAATCACATTGCACGTAGC | + |
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Preference number: 4 (lower is better) Translates to: AENSSNHKTSLFYMTQPSGKNER*NHIARS Trigger: GCTACGTGCAATGTGATTGCATCTCTCATTTTTGCC...GGAAGGCTGTGTCATGTAGAATAAACTAGTCTTGTGGTTGCTGCTGTTTTCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068861.8 |
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| CDS GCA 90 bp | GCGGTCAGCAGTGTCCTCTCCACAGGTCAACAGCACTTCCTTCATTaGCTTCATTCTGTTGATCACAACCATAGGCTTCCAGGCCATCTG | + |
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Preference number: 5 (lower is better) Translates to: AVSSVLSTGQQHFLH*LHSVDHNHRLPGHL Trigger: CAGATGGCCTGGAAGCCTATGGTTGTGATCAACAGAATGAAGGCAATGAAGGAAGTGCTGTTGACCTGTGGAGAGGACACTGCTGACCGC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068861.8 ENSMUST00000229904.2 |
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| CDS-3UTR CAA 90 bp | GAAAACAGCAGCAACCACAAGACTAGTTTATTCTACATGACACAGCCTTCCCTGAGGTGGCCGGCCTCCTaGATCACCCACTCCTCCAGA | + |
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Preference number: 5 (lower is better) Translates to: ENSSNHKTSLFYMTQPSLRWPAS*ITHSSR Trigger: TCTGGAGGAGTGGGTGATCAAGGAGGCCGGCCACCT...CAGGGAAGGCTGTGTCATGTAGAATAAACTAGTCTTGTGGTTGCTGCTGTTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068861.8 |
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| CDS-3UTR CAA 90 bp | AGCAACCACAAGACTAGTTTATTCTACATGACACAGCCTTCCCTGCAGAGCCTGCTCTCAGGATTTCCCTaGGCCTTCTCTATCTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: SNHKTSLFYMTQPSLQSLLSGFP*AFSISA Trigger: GGCAGAGATAGAGAAGGCCAAGGGAAATCCTGAGAG...CAGGCTCTGCAGGGAAGGCTGTGTCATGTAGAATAAACTAGTCTTGTGGTTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068861.8 |
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| CDS-3UTR CAA 90 bp | AACCACAAGACTAGTTTATTCTACATGACACAGCCTTCCCTGCAGAGCCTGTATACTTGTCAGCCAGCCTaGGGATGTGCAGGAGTATCG | + |
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Preference number: 5 (lower is better) Translates to: NHKTSLFYMTQPSLQSLYTCQPA*GCAGVS Trigger: CGATACTCCTGCACATCCCAAGGCTGGCTGACAAGT...ATACAGGCTCTGCAGGGAAGGCTGTGTCATGTAGAATAAACTAGTCTTGTGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068861.8 |
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| CDS-3UTR CAA 90 bp | AGCAGCAACCACAAGACTAGTTTATTCTACATGACACAGCCTTCCCTGCAGAGCGAAGGACTTCTGACTTaGCAGGAACTTGTCAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: SSNHKTSLFYMTQPSLQSEGLLT*QELVSQ Trigger: CTGGCTGACAAGTTCCTGCAAAGTCAGAAGTCCTTC...GCTCTGCAGGGAAGGCTGTGTCATGTAGAATAAACTAGTCTTGTGGTTGCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068861.8 |
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| CDS-3UTR CAA 90 bp | AACTTGTCAGCCAGCCTTGGGATGTGCAGGAGTATCGGGAATGTGTTAATAACCAGGCCATCTGTAGGCTaGTACAAGCTGTATGGCATA | + |
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Preference number: 5 (lower is better) Translates to: NLSASLGMCRSIGNVLITRPSVG*YKLYGI Trigger: TATGCCATACAGCTTGTACAAGCCTACAGATGGCCT...GGTTATTAACACATTCCCGATACTCCTGCACATCCCAAGGCTGGCTGACAAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228974.2 |
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| CDS-3UTR CAA 90 bp | GCAGAAAACAGCAGCAACCACAAGACTAGTTTATTCTACATGACACAGCCTTCCCCTTGGGATCTGGGCTaGAAACCAAGATGCTCAAAG | + |
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Preference number: 5 (lower is better) Translates to: AENSSNHKTSLFYMTQPSPWDLG*KPRCSK Trigger: CTTTGAGCATCTTGGTTTCAAGCCCAGATCCCAAGG...GGAAGGCTGTGTCATGTAGAATAAACTAGTCTTGTGGTTGCTGCTGTTTTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068861.8 |
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| CDS-3UTR CAA 90 bp | AACCACAAGACTAGTTTATTCTACATGACACAGCCTTCCCTGCAGAGCCTGTATTGCAAAGATCATACCTaGGGATCTGGGCTTGAAACC | + |
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Preference number: 5 (lower is better) Translates to: NHKTSLFYMTQPSLQSLYCKDHT*GSGLET Trigger: GGTTTCAAGCCCAGATCCCAAGGTATGATCTTTGCA...ATACAGGCTCTGCAGGGAAGGCTGTGTCATGTAGAATAAACTAGTCTTGTGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068861.8 |
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| CDS-3UTR CAA 90 bp | GTTAAAGCAGAAAACAGCAGCAACCACAAGACTAGTTTATTCTACATGACACAGCTGCCCAGGCCAAAATaGCGCAGAGAAGACAAAGAG | + |
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Preference number: 5 (lower is better) Translates to: VKAENSSNHKTSLFYMTQLPRPK*RREDKE Trigger: CTCTTTGTCTTCTCTGCGCAATTTTGGCCTGGGCAG...CTGTGTCATGTAGAATAAACTAGTCTTGTGGTTGCTGCTGTTTTCTGCTTTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068861.8 |
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| CDS-3UTR CAA 90 bp | AACCACAAGACTAGTTTATTCTACATGACACAGCCTTCCCTGCAGAGCCTGTATTTTTTCAGCATGGTGTaGGGATTGATGTACTGCCCA | + |
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Preference number: 5 (lower is better) Translates to: NHKTSLFYMTQPSLQSLYFFSMV*GLMYCP Trigger: TGGGCAGTACATCAATCCCAACACCATGCTGAAAAA...ATACAGGCTCTGCAGGGAAGGCTGTGTCATGTAGAATAAACTAGTCTTGTGGTT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000068861.8 |
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| CDS TCA 72 bp | TCTATGGTCACTGGGCTGGGGCTGTCCATCAGGCACTaGGAAGCTAAAGCGCTGCAGGAGGCAGGTGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: SMVTGLGLSIRH*EAKALQEAGEE Trigger: TTCTTCACCTGCCTCCTGCAGCGCTTTAGCTTCTCAGTGCCTGATGGACAGCCCCAGCCCAGTGACCATAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068861.8 ENSMUST00000229904.2 |
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| CDS CCA 72 bp | TCTGGGCTTGAAACCAAGATGCTCAAAGATGGGCACTaGAGGGCGGTCAGCAGTGTCCTCTCCACAGGTCAA | + |
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Preference number: 6 (lower is better) Translates to: SGLETKMLKDGH*RAVSSVLSTGQ Trigger: TTGACCTGTGGAGAGGACACTGCTGACCGCCCTCCAGTGCCCATCTTTGAGCATCTTGGTTTCAAGCCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068861.8 ENSMUST00000229103.2 ENSMUST00000229904.2 |
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| CDS GCA 72 bp | CCTATGACCTCATCGATTTCTTGTTGGACTCTGCGCTaGACATCTGGATGCAGGATCATGAGCAGCAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: PMTSSISCWTLR*TSGCRIMSSRA Trigger: GGCCCTGCTGCTCATGATCCTGCATCCAGATGTGCAGCGCAGAGTCCAACAAGAAATCGATGAGGTCATAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068861.8 ENSMUST00000229904.2 |
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| CDS GCA 72 bp | ATGTGGGCCTGGTCTGCCATCTCTGGATGCCTCACCTaGCCTATGACCTCATCGATTTCTTGTTGGACTCTG | + |
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Preference number: 6 (lower is better) Translates to: MWAWSAISGCLT*PMTSSISCWTL Trigger: CAGAGTCCAACAAGAAATCGATGAGGTCATAGGGCAGGTGAGGCATCCAGAGATGGCAGACCAGGCCCACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068861.8 ENSMUST00000229904.2 |
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| CDS CAA 90 bp | TTCAGCATGGTGTTGGGATTGATGTACTGCCCTTGGGATCTGGGCTaGAAACCAAGATGCTCAAAGATGGGCACTGGAGGGCGGTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: FSMVLGLMYCPWDLG*KPRCSKMGTGGRSA Trigger: TGCTGACCGCCCTCCAGTGCCCATCTTTGAGCATCTTGGTTTCAAGCCCAGATCCCAAGGGCAGTACATCAATCCCAACACCATGCTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000229103.2 ENSMUST00000229904.2 |
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| CDS CAA 72 bp | GTGTTGGGATTGATGTACTGCCCTTGGGATCTGGGCTaGAAACCAAGATGCTCAAAGATGGGCACTGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: VLGLMYCPWDLG*KPRCSKMGTGG Trigger: CCCTCCAGTGCCCATCTTTGAGCATCTTGGTTTCAAGCCCAGATCCCAAGGGCAGTACATCAATCCCAACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000229103.2 ENSMUST00000229904.2 |
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| CDS CCA 72 bp | GCAACCATAATAGAAAAGACTCTATGGTCACTGGGCTaGGGCTGTCCATCAGGCACTGAGAAGCTAAAGCGC | + |
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Preference number: 6 (lower is better) Translates to: ATIIEKTLWSLG*GCPSGTEKLKR Trigger: GCGCTTTAGCTTCTCAGTGCCTGATGGACAGCCCCAGCCCAGTGACCATAGAGTCTTTTCTATTATGGTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068861.8 ENSMUST00000229904.2 |
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| CDS GCA 72 bp | TTGTACAAGCTGTATGGCATATTATTTAGGTCTACCTaGAGCAGGTTACCCAGCACAGGCCATGGCACAGGG | + |
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Preference number: 6 (lower is better) Translates to: LYKLYGILFRST*SRLPSTGHGTG Trigger: CCCTGTGCCATGGCCTGTGCTGGGTAACCTGCTGCAGGTAGACCTAAATAATATGCCATACAGCTTGTACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068861.8 ENSMUST00000228974.2 ENSMUST00000229904.2 |
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| CDS GCA 72 bp | AGTGTCCTCTCCACAGGTCAACAGCACTTCCTTCATTaGCTTCATTCTGTTGATCACAACCATAGGCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: SVLSTGQQHFLH*LHSVDHNHRLP Trigger: TGGAAGCCTATGGTTGTGATCAACAGAATGAAGGCAATGAAGGAAGTGCTGTTGACCTGTGGAGAGGACACT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000068861.8 ENSMUST00000228974.2 ENSMUST00000229103.2 ENSMUST00000229904.2 |
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| CDS CCA 72 bp | TTTTTCAGCATGGTGTTGGGATTGATGTACTGCCCTTaGGATCTGGGCTTGAAACCAAGATGCTCAAAGATG | + |
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Preference number: 6 (lower is better) Translates to: FFSMVLGLMYCP*DLGLKPRCSKM Trigger: CATCTTTGAGCATCTTGGTTTCAAGCCCAGATCCCAAGGGCAGTACATCAATCCCAACACCATGCTGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000229103.2 ENSMUST00000229904.2 |
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