Pregenerated sensors for CYP2C70 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060613Ensembl transcript IDs: ENSMUST00000051846.13, ENSMUST00000165102.2, ENSMUST00000171604.8
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGAAGGAAGCTAGGATCACAGGGGGAGCCATTGGTTTTTCTCAGTaGATCCAACATATAAAGGATTTCCTCCTGAATTCGGTCTTCAAT | + |
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Preference number: 1 (lower is better) Translates to: QKEARITGGAIGFSQ*IQHIKDFLLNSVFN Trigger: ATTGAAGACCGAATTCAGGAGGAAATCCTTTATATGTTGGATGCACTGAGAAAAACCAATGGCTCCCCCTGTGATCCTAGCTTCCTTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000171604.8 |
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| 3UTR GCA 72 bp | GCTAGGATCACAGGGGGAGCCATTGGTTTTTCTCAGTaGATCCAACATATAAAGGATTTCCTCCTGAATTCG | + |
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Preference number: 3 (lower is better) Translates to: ARITGGAIGFSQ*IQHIKDFLLNS Trigger: CGAATTCAGGAGGAAATCCTTTATATGTTGGATGCACTGAGAAAAACCAATGGCTCCCCCTGTGATCCTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000171604.8 |
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| 3UTR-3UTR CAA 90 bp | TCTGTTGAGTCACATCTTTTAAGAATCTGTTATGGATTCCAGGGAGATAGTATAACAGTAGAGATCACATaGCAGGGAACACAGGCCAGA | + |
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Preference number: 3 (lower is better) Translates to: SVESHLLRICYGFQGDSITVEIT*QGTQAR Trigger: TCTGGCCTGTGTTCCCTGCAATGTGATCTCTACTGT...TATACTATCTCCCTGGAATCCATAACAGATTCTTAAAAGATGTGACTCAACAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171604.8 |
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| 3UTR TCA 72 bp | TGCCTGTTTATTTCCTCCAAGATGAACTTTTTCTGTTaGGTCACATCTTTTAAGAATCTGTTATGGATTCCA | + |
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Preference number: 3 (lower is better) Translates to: CLFISSKMNFFC*VTSFKNLLWIP Trigger: TGGAATCCATAACAGATTCTTAAAAGATGTGACTCAACAGAAAAAGTTCATCTTGGAGGAAATAAACAGGCA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171604.8 |
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| CDS-3UTR CCA 90 bp | AACACAGGCCAGAAGGAAGCTAGGATCACAGGGGGAGCCATTGGTTTTTCTCAGCAATTGGTAAAGGAGTaGGGCCAGGTGGGAGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: NTGQKEARITGGAIGFSQQLVKE*GQVGAS Trigger: GGAAGCTCCCACCTGGCCCCACTCCTTTACCAATTG...CTGAGAAAAACCAATGGCTCCCCCTGTGATCCTAGCTTCCTTCTGGCCTGTGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000171604.8 |
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| CDS-3UTR CCA 90 bp | GCATCCCTGCCATTCATAAAGGACTACCAGATGCAGGTACATAGGACAGGAGGACATGCAGCACCACAGTaGGCTTCATGCCCAGGTATA | + |
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Preference number: 4 (lower is better) Translates to: ASLPFIKDYQMQVHRTGGHAAPQ*ASCPGI Trigger: TATACCTGGGCATGAAGCCCACTGTGGTGCTGCATG...TCCTCCTGTCCTATGTACCTGCATCTGGTAGTCCTTTATGAATGGCAGGGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051846.13 |
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| CDS-3UTR CCA 90 bp | GGACCTTTTTGCTCACAGAAGAAGCAGGGTCTCAGCCATCCATGTGAAATACTACAATTGGTAAAGGAGTaGGGCCAGGTGGGAGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: GPFCSQKKQGLSHPCEILQLVKE*GQVGAS Trigger: GGAAGCTCCCACCTGGCCCCACTCCTTTACCAATTG...TAGTATTTCACATGGATGGCTGAGACCCTGCTTCTTCTGTGAGCAAAAAGGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051846.13 |
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| CDS-3UTR TCA 90 bp | ACAGGAGGACCTTTTTGCTCACAGAAGAAGCAGGGTCTCAGCCATCCATGTGAACCTCTGCCACGGTGCTaGTTCCATAGAAAAAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: TGGPFCSQKKQGLSHPCEPLPRC*FHRKRK Trigger: TTTTCTTTTTCTATGGAATCAGCACCGTGGCAGAGG...TTCACATGGATGGCTGAGACCCTGCTTCTTCTGTGAGCAAAAAGGTCCTCCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000051846.13 |
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| CDS-3UTR TCA 90 bp | ACAGGAGGACCTTTTTGCTCACAGAAGAAGCAGGGTCTCAGCCATCCATGTGAAAGTCCTGAGGGTTACTaGGGTCCAGAGATTTTTGAT | + |
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Preference number: 4 (lower is better) Translates to: TGGPFCSQKKQGLSHPCESPEGY*GPEIFD Trigger: ATCAAAAATCTCTGGACCTCAGTAACCCTCAGGACT...TTCACATGGATGGCTGAGACCCTGCTTCTTCTGTGAGCAAAAAGGTCCTCCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000051846.13 |
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| CDS-3UTR GCA 90 bp | GACTACCAGATGCAGGTACATAGGACAGGAGGACCTTTTTGCTCACAGAAGAAGTTAGAAACATCTCCATaGGGGCCAGACCTTCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: DYQMQVHRTGGPFCSQKKLETSP*GPDLLQ Trigger: TTGGAGAAGGTCTGGCCCGCATGGAGATGTTTCTAA...CTTCTTCTGTGAGCAAAAAGGTCCTCCTGTCCTATGTACCTGCATCTGGTAGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051846.13 |
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| CDS-3UTR TCA 90 bp | AGGAAGCTAGGATCACAGGGGGAGCCATTGGTTTTTCTCAGTGCATCCAACATACCTCTGCCACGGTGCTaGTTCCATAGAAAAAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: RKLGSQGEPLVFLSASNIPLPRC*FHRKRK Trigger: TTTTCTTTTTCTATGGAATCAGCACCGTGGCAGAGG...TATGTTGGATGCACTGAGAAAAACCAATGGCTCCCCCTGTGATCCTAGCTTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000171604.8 |
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| CDS-3UTR TCA 90 bp | TACCAGATGCAGGTACATAGGACAGGAGGACCTTTTTGCTCACAGAAGAAGCAGCTTGGCTGGTTCTACTaGGTAACGATGAATCCGTTT | + |
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Preference number: 4 (lower is better) Translates to: YQMQVHRTGGPFCSQKKQLGWFY*VTMNPF Trigger: AAACGGATTCATCGTTACTCAGTAGAACCAGCCAAG...CTGCTTCTTCTGTGAGCAAAAAGGTCCTCCTGTCCTATGTACCTGCATCTGGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051846.13 |
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| CDS-3UTR GCA 90 bp | CCATTCATAAAGGACTACCAGATGCAGGTACATAGGACAGGAGGACCTTTTTGCATTGCTTTGTATCCATaGAGCACCACAGTGGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: PFIKDYQMQVHRTGGPFCIALYP*STTVGF Trigger: GAAGCCCACTGTGGTGCTGCATGGATACAAAGCAAT...GCAAAAAGGTCCTCCTGTCCTATGTACCTGCATCTGGTAGTCCTTTATGAATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051846.13 |
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| CDS-3UTR GCA 90 bp | CTGCCATTCATAAAGGACTACCAGATGCAGGTACATAGGACAGGAGGACCTTTTCTGAACTCCACATCCTaGGTTGTCTTACGAGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: LPFIKDYQMQVHRTGGPFLNSTS*VVLRGE Trigger: TTCACCTCGTAAGACAACGCAGGATGTGGAGTTCAG...AAAAGGTCCTCCTGTCCTATGTACCTGCATCTGGTAGTCCTTTATGAATGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051846.13 |
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| CDS-3UTR TCA 90 bp | AAGTATAGAGGTAGCATCCCTGCCATTCATAAAGGACTACCAGATGCAGGTACAAGCTCTTCTTCCTGCTaGGAAAGCCACAAAGTAGTC | + |
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Preference number: 4 (lower is better) Translates to: KYRGSIPAIHKGLPDAGTSSSSC*ESHKVV Trigger: GACTACTTTGTGGCTTTCTCAGCAGGAAGAAGAGCT...TGTACCTGCATCTGGTAGTCCTTTATGAATGGCAGGGATGCTACCTCTATACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051846.13 |
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| CDS-3UTR CCA 90 bp | GGACCTTTTTGCTCACAGAAGAAGCAGGGTCTCAGCCATCCATGTGAAATACTAGCCCATATTTCACTGTaGAACTCGTTGTCTCTGTTC | + |
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Preference number: 4 (lower is better) Translates to: GPFCSQKKQGLSHPCEILAHISL*NSLSLF Trigger: GAACAGAGACAACGAGTTCCACAGTGAAATATGGGC...TAGTATTTCACATGGATGGCTGAGACCCTGCTTCTTCTGTGAGCAAAAAGGTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051846.13 |
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| CDS-3UTR TCA 90 bp | ACAGGAGGACCTTTTTGCTCACAGAAGAAGCAGGGTCTCAGCCATCCATGTGAAAGTAGTCACTCTTTTTaGAGTTCCCTTTCTCATCAA | + |
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Preference number: 4 (lower is better) Translates to: TGGPFCSQKKQGLSHPCESSHSF*SSLSHQ Trigger: TTGATGAGAAAGGGAACTTCAAAAAGAGTGACTACT...TTCACATGGATGGCTGAGACCCTGCTTCTTCTGTGAGCAAAAAGGTCCTCCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000051846.13 |
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| CDS-3UTR TCA 90 bp | CTTTTTGCTCACAGAAGAAGCAGGGTCTCAGCCATCCATGTGAAATACTACACAAGGTCCAGAGATTTTTaGTGCCTGTTTATTTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: LFAHRRSRVSAIHVKYYTRSRDF*CLFISS Trigger: GGAGGAAATAAACAGGCATCAAAAATCTCTGGACCT...TGTGTAGTATTTCACATGGATGGCTGAGACCCTGCTTCTTCTGTGAGCAAAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000051846.13 |
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| CDS-3UTR CCA 90 bp | TCTATGAAAATTCTCCATGAAGTCTTGGAATGTCTGATCATTGTAGTCAAATCGCAATTGGTAAAGGAGTaGGGCCAGGTGGGAGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: SMKILHEVLECLIIVVKSQLVKE*GQVGAS Trigger: GGAAGCTCCCACCTGGCCCCACTCCTTTACCAATTG...CGATTTGACTACAATGATCAGACATTCCAAGACTTCATGGAGAATTTTCATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165102.2 ENSMUST00000171604.8 |
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| CDS-3UTR CCA 90 bp | CTTTTTGCTCACAGAAGAAGCAGGGTCTCAGCCATCCATGTGAAATACTACACATTCTCATCAAGAAAGTaGCCAGGATCAAACTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: LFAHRRSRVSAIHVKYYTFSSRK*PGSNFS Trigger: AGAGAAGTTTGATCCTGGCCACTTTCTTGATGAGAA...TGTGTAGTATTTCACATGGATGGCTGAGACCCTGCTTCTTCTGTGAGCAAAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051846.13 |
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| CDS-3UTR TCA 90 bp | TCTATGAAAATTCTCCATGAAGTCTTGGAATGTCTGATCATTGTAGTCAAATCGCCTCTGCCACGGTGCTaGTTCCATAGAAAAAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: SMKILHEVLECLIIVVKSPLPRC*FHRKRK Trigger: TTTTCTTTTTCTATGGAATCAGCACCGTGGCAGAGG...CGATTTGACTACAATGATCAGACATTCCAAGACTTCATGGAGAATTTTCATAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165102.2 ENSMUST00000171604.8 |
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| 3UTR CAA 72 bp | AATAAAGTCCTGAGGGTTACTGAGGTCCAGAGATTTTaGATGCCTGTTTATTTCCTCCAAGATGAACTTTTT | + |
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Preference number: 4 (lower is better) Translates to: NKVLRVTEVQRF*MPVYFLQDELF Trigger: AAAAAGTTCATCTTGGAGGAAATAAACAGGCATCAAAAATCTCTGGACCTCAGTAACCCTCAGGACTTTATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171604.8 |
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| CDS-3UTR CCA 90 bp | CTGGTTTATAAAGAATTGAGAAAGTATAGAGGTAGCATCCCTGCCATTCATAAATACGAGGTGAAGGAATaGGAACAAAATCAATGTATC | + |
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Preference number: 4 (lower is better) Translates to: LVYKELRKYRGSIPAIHKYEVKE*EQNQCI Trigger: GATACATTGATTTTGTTCCCATTCCTTCACCTCGTA...TTTATGAATGGCAGGGATGCTACCTCTATACTTTCTCAATTCTTTATAAACCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051846.13 |
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| CDS-3UTR CAA 90 bp | CCATTCATAAAGGACTACCAGATGCAGGTACATAGGACAGGAGGACCTTTTTGCTCACAGGGGGAGCCATaGGTTTTTCTCAGTGCATCC | + |
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Preference number: 5 (lower is better) Translates to: PFIKDYQMQVHRTGGPFCSQGEP*VFLSAS Trigger: GGATGCACTGAGAAAAACCAATGGCTCCCCCTGTGA...GCAAAAAGGTCCTCCTGTCCTATGTACCTGCATCTGGTAGTCCTTTATGAATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000051846.13 |
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| CDS-3UTR CAA 90 bp | CTTTTTGCTCACAGAAGAAGCAGGGTCTCAGCCATCCATGTGAAATACTACACATCACTGTGGAACTCGTaGTCTCTGTTCCGGCTCCAA | + |
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Preference number: 5 (lower is better) Translates to: LFAHRRSRVSAIHVKYYTSLWNS*SLFRLQ Trigger: TTGGAGCCGGAACAGAGACAACGAGTTCCACAGTGA...TGTGTAGTATTTCACATGGATGGCTGAGACCCTGCTTCTTCTGTGAGCAAAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051846.13 |
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| CDS-3UTR CAA 90 bp | TACATAGGACAGGAGGACCTTTTTGCTCACAGAAGAAGCAGGGTCTCAGCCATCGAGGTCCAGAGATTTTaGATGCCTGTTTATTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: YIGQEDLFAHRRSRVSAIEVQRF*MPVYFL Trigger: GAGGAAATAAACAGGCATCAAAAATCTCTGGACCTC...GATGGCTGAGACCCTGCTTCTTCTGTGAGCAAAAAGGTCCTCCTGTCCTATGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051846.13 |
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| CDS-3UTR CAA 90 bp | CCATTCATAAAGGACTACCAGATGCAGGTACATAGGACAGGAGGACCTTTTTGCATTACACTTGTGCCCTaGGGAATGTGGTATCCTCTG | + |
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Preference number: 5 (lower is better) Translates to: PFIKDYQMQVHRTGGPFCITLVP*GMWYPL Trigger: CAGAGGATACCACATTCCCAAGGGCACAAGTGTAAT...GCAAAAAGGTCCTCCTGTCCTATGTACCTGCATCTGGTAGTCCTTTATGAATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051846.13 |
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| CDS TCA 90 bp | ATGAAACAGAGCTCAAAGGGTGGAGGCACATGCAATAAACCAGTTTaGACTGGCTTGGTGTCGATGTCCTCTGGTTTAACCAGAGGTTTT | + |
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Preference number: 5 (lower is better) Translates to: MKQSSKGGGTCNKPV*TGLVSMSSGLTRGF Trigger: AAAACCTCTGGTTAAACCAGAGGACATCGACACCAAGCCAGTTCAAACTGGTTTATTGCATGTGCCTCCACCCTTTGAGCTCTGTTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051846.13 |
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| CDS TCA 90 bp | AATGTGGTATCCTCTGAACTCCACATCCTGCGTTGTCTTACGAGGTaGAGGAATGGGAACAAAATCAATGTATCTCTGAATCTCATGCAA | + |
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Preference number: 5 (lower is better) Translates to: NVVSSELHILRCLTR*RNGNKINVSLNLMQ Trigger: TTGCATGAGATTCAGAGATACATTGATTTTGTTCCCATTCCTTCACCTCGTAAGACAACGCAGGATGTGGAGTTCAGAGGATACCACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051846.13 |
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| CDS CCA 90 bp | GTTTGTTTCCATGTTTCTCCATTGCTGAAGACGATGCCTAAGCCTTaGCTGGTTCTACTGAGTAACGATGAATCCGTTTTATCAGAAAAC | + |
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Preference number: 5 (lower is better) Translates to: VCFHVSPLLKTMPKP*LVLLSNDESVLSEN Trigger: GTTTTCTGATAAAACGGATTCATCGTTACTCAGTAGAACCAGCCAAGGCTTAGGCATCGTCTTCAGCAATGGAGAAACATGGAAACAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051846.13 |
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| CDS-3UTR CAA 90 bp | ATAAAGGACTACCAGATGCAGGTACATAGGACAGGAGGACCTTTTTGCTCACAGAAATGCTGTAAGATGTaGGTCAGGATTAGAAACATC | + |
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Preference number: 5 (lower is better) Translates to: IKDYQMQVHRTGGPFCSQKCCKM*VRIRNI Trigger: GATGTTTCTAATCCTGACCAACATCTTACAGCATTT...CTGTGAGCAAAAAGGTCCTCCTGTCCTATGTACCTGCATCTGGTAGTCCTTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051846.13 |
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| CDS-3UTR CAA 90 bp | GTTTATAAAGAATTGAGAAAGTATAGAGGTAGCATCCCTGCCATTCATAAAGGAACAGTAGAGATCACATaGCAGGGAACACAGGCCAGA | + |
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Preference number: 5 (lower is better) Translates to: VYKELRKYRGSIPAIHKGTVEIT*QGTQAR Trigger: TCTGGCCTGTGTTCCCTGCAATGTGATCTCTACTGT...TCCTTTATGAATGGCAGGGATGCTACCTCTATACTTTCTCAATTCTTTATAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051846.13 |
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| CDS-3UTR CAA 90 bp | TCTGTTGAGTCACATCTTTTAAGAATCTGTTATGGATTCCAGGGAGATAGTATATTCCATGTTTCTCCATaGCTGAAGACGATGCCATGC | + |
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Preference number: 5 (lower is better) Translates to: SVESHLLRICYGFQGDSIFHVSP*LKTMPC Trigger: GCATGGCATCGTCTTCAGCAATGGAGAAACATGGAA...TATACTATCTCCCTGGAATCCATAACAGATTCTTAAAAGATGTGACTCAACAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171604.8 |
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| CDS GCA 72 bp | CCCTTGGGAATGTGGTATCCTCTGAACTCCACATCCTaGGTTGTCTTACGAGGTGAAGGAATGGGAACAAAA | + |
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Preference number: 6 (lower is better) Translates to: PLGMWYPLNSTS*VVLRGEGMGTK Trigger: TTTTGTTCCCATTCCTTCACCTCGTAAGACAACGCAGGATGTGGAGTTCAGAGGATACCACATTCCCAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051846.13 |
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| CDS CCA 72 bp | GTCAGACATGCCATTACACTTGTGCCCTTGGGAATGTaGTATCCTCTGAACTCCACATCCTGCGTTGTCTTA | + |
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Preference number: 6 (lower is better) Translates to: VRHAITLVPLGM*YPLNSTSCVVL Trigger: TAAGACAACGCAGGATGTGGAGTTCAGAGGATACCACATTCCCAAGGGCACAAGTGTAATGGCATGTCTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051846.13 |
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| CDS GCA 72 bp | GCTGTAAGATGTTGGTCAGGATTAGAAACATCTCCATaGGGGCCAGACCTTCTCCAATACAAGCTCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: AVRCWSGLETSP*GPDLLQYKLFF Trigger: GAAGAAGAGCTTGTATTGGAGAAGGTCTGGCCCGCATGGAGATGTTTCTAATCCTGACCAACATCTTACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051846.13 |
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| CDS TCA 72 bp | TCCTCTGAACTCCACATCCTGCGTTGTCTTACGAGGTaGAGGAATGGGAACAAAATCAATGTATCTCTGAAT | + |
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Preference number: 6 (lower is better) Translates to: SSELHILRCLTR*RNGNKINVSLN Trigger: ATTCAGAGATACATTGATTTTGTTCCCATTCCTTCACCTCGTAAGACAACGCAGGATGTGGAGTTCAGAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051846.13 |
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| CDS CCA 72 bp | ACTCCACATCCTGCGTTGTCTTACGAGGTGAAGGAATaGGAACAAAATCAATGTATCTCTGAATCTCATGCA | + |
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Preference number: 6 (lower is better) Translates to: TPHPALSYEVKE*EQNQCISESHA Trigger: TGCATGAGATTCAGAGATACATTGATTTTGTTCCCATTCCTTCACCTCGTAAGACAACGCAGGATGTGGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051846.13 |
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