Pregenerated sensors for CYP2C50 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054827Ensembl transcript IDs: ENSMUST00000068094.13, ENSMUST00000080171.3
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | AGGCAAAAGAAATGGATAAAAAGCAGTGTGTCCAGTGTGGAAAGTAGTGAATTAACAGACAGGAGAGGGTaGACACCAGGACCAGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: RQKKWIKSSVSSVESSELTDRRG*TPGPGL Trigger: CAATCCTGGTCCTGGTGTTCACCCTCTCCTGTCTGT...TAATTCACTACTTTCCACACTGGACACACTGCTTTTTATCCATTTCTTTTGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068094.13 ENSMUST00000080171.3 |
||
| CDS-3UTR TCA 90 bp | CAAAAGAAATGGATAAAAAGCAGTGTGTCCAGTGTGGAAAGTAGTGAATTAAAGACAGACAGGAGAGGGTaGACACCAGGACCAGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: QKKWIKSSVSSVESSELKTDRRG*TPGPGL Trigger: CAATCCTGGTCCTGGTGTTCACCCTCTCCTGTCTGT...CTTTAATTCACTACTTTCCACACTGGACACACTGCTTTTTATCCATTTCTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068094.13 ENSMUST00000080171.3 |
||
| CDS-3UTR TCA 90 bp | AGGACCAGTCAGAAATATTTGTGCAGGATCTGCAAATTGGTAAATGTATGTTCAGAAAGCAGGAGGCACTaGGGCCAATCCAATGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RTSQKYLCRICKLVNVCSESRRH*GQSNEH Trigger: ATGCTCATTGGATTGGCCTCAGTGCCTCCTGCTTTC...TGAACATACATTTACCAATTTGCAGATCCTGCACAAATATTTCTGACTGGTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068094.13 ENSMUST00000080171.3 |
||
| CDS-3UTR CCA 90 bp | TTAACTTGGAATCAGGTCCATATCATCACAGCATATGGTAACAGTGTTTCAGAAAGGGTCAAACTTCTCTaGGTTGGGGAACTCTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LTWNQVHIITAYGNSVSERVKLL*VGELFA Trigger: AGCAAAGAGTTCCCCAACCCAGAGAAGTTTGACCCT...TTCTGAAACACTGTTACCATATGCTGTGATGATATGGACCTGATTCCAAGTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068094.13 ENSMUST00000080171.3 |
||
| CDS-3UTR TCA 90 bp | TTAACTTGGAATCAGGTCCATATCATCACAGCATATGGTAACAGTGTTTCAGAATATCCGTTTTCCTGTTaGGAAGGGCATGAAGTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LTWNQVHIITAYGNSVSEYPFSC*EGHEVV Trigger: GACTACTTCATGCCCTTCTCAACAGGAAAACGGATA...TTCTGAAACACTGTTACCATATGCTGTGATGATATGGACCTGATTCCAAGTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068094.13 ENSMUST00000080171.3 |
||
| CDS-3UTR TCA 90 bp | GACCAGTCAGAAATATTTGTGCAGGATCTGCAAATTGGTAAATGTATGTTCATACTGAGGCCAATCCAATaGGCATTGGGGTTACATCTA | + |
|
Preference number: 4 (lower is better) Translates to: DQSEIFVQDLQIGKCMFILRPIQ*ALGLHL Trigger: TAGATGTAACCCCAATGCTCATTGGATTGGCCTCAG...TATGAACATACATTTACCAATTTGCAGATCCTGCACAAATATTTCTGACTGGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068094.13 ENSMUST00000080171.3 |
||
| CDS-3UTR CCA 90 bp | AGGCAAAAGAAATGGATAAAAAGCAGTGTGTCCAGTGTGGAAAGTAGTGAATTAAGCTTTATCAAAAACTaGGAGCCTTCCTCTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RQKKWIKSSVSSVESSELSFIKN*EPSSSS Trigger: GCTGGAAGAGGAAGGCTCCCAGTTTTTGATAAAGCT...TAATTCACTACTTTCCACACTGGACACACTGCTTTTTATCCATTTCTTTTGCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000068094.13 ENSMUST00000080171.3 |
||
| CDS-3UTR CCA 90 bp | TTAACTTGGAATCAGGTCCATATCATCACAGCATATGGTAACAGTGTTTCAGAAAGCTTTATCAAAAACTaGGAGCCTTCCTCTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LTWNQVHIITAYGNSVSESFIKN*EPSSSS Trigger: GCTGGAAGAGGAAGGCTCCCAGTTTTTGATAAAGCT...TTCTGAAACACTGTTACCATATGCTGTGATGATATGGACCTGATTCCAAGTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068094.13 ENSMUST00000080171.3 |
||
| CDS-3UTR TCA 90 bp | GACCAGTCAGAAATATTTGTGCAGGATCTGCAAATTGGTAAATGTATGTTCATATATCCGTTTTCCTGTTaGGAAGGGCATGAAGTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: DQSEIFVQDLQIGKCMFIYPFSC*EGHEVV Trigger: GACTACTTCATGCCCTTCTCAACAGGAAAACGGATA...TATGAACATACATTTACCAATTTGCAGATCCTGCACAAATATTTCTGACTGGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068094.13 ENSMUST00000080171.3 |
||
| CDS-3UTR CCA 90 bp | CATATGGTAACAGTGTTTCAGAAAATAGGACCAGTCAGAAATATTTGTGCAGGAAAATTGGTGAAGGATTaGCAGATGTCCTTCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: HMVTVFQKIGPVRNICAGKLVKD*QMSFTL Trigger: CAATGTGAAGGACATCTGCCAATCCTTCACCAATTT...TCCTGCACAAATATTTCTGACTGGTCCTATTTTCTGAAACACTGTTACCATATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068094.13 ENSMUST00000080171.3 |
||
| CDS-3UTR CCA 90 bp | AGGCAAAAGAAATGGATAAAAAGCAGTGTGTCCAGTGTGGAAAGTAGTGAATTAAAATTGGTGAAGGATTaGCAGATGTCCTTCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: RQKKWIKSSVSSVESSELKLVKD*QMSFTL Trigger: CAATGTGAAGGACATCTGCCAATCCTTCACCAATTT...TAATTCACTACTTTCCACACTGGACACACTGCTTTTTATCCATTTCTTTTGCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000068094.13 ENSMUST00000080171.3 |
||
| CDS-3UTR CAA 90 bp | ATTATGAGCAGGCAAAAGAAATGGATAAAAAGCAGTGTGTCCAGTGTGGAAAGTGGGTTGGGGAACTCTTaGCTATCACGCAGCACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: IMSRQKKWIKSSVSSVESGLGNS*LSRSTD Trigger: ATCAGTGCTGCGTGATAGCAAAGAGTTCCCCAACCC...ACTTTCCACACTGGACACACTGCTTTTTATCCATTTCTTTTGCCTGCTCATAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000068094.13 ENSMUST00000080171.3 |
||
| CDS CCA 90 bp | TTTACTAAATATAATGCCCATTCCATTAGTAGCTTTATCAAAAACTaGGAGCCTTCCTCTTCCAGCAAACTCCTCCCCATGGTCAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: FTKYNAHSISSFIKN*EPSSSSKLLPMVNQ Trigger: CTGGTTGACCATGGGGAGGAGTTTGCTGGAAGAGGAAGGCTCCCAGTTTTTGATAAAGCTACTAATGGAATGGGCATTATATTTAGTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068094.13 ENSMUST00000080171.3 |
||
| CDS-3UTR CAA 90 bp | CAAAAGAAATGGATAAAAAGCAGTGTGTCCAGTGTGGAAAGTAGTGAATTAAAGGGGTTGGGGAACTCTTaGCTATCACGCAGCACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: QKKWIKSSVSSVESSELKGLGNS*LSRSTD Trigger: ATCAGTGCTGCGTGATAGCAAAGAGTTCCCCAACCC...CTTTAATTCACTACTTTCCACACTGGACACACTGCTTTTTATCCATTTCTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000068094.13 ENSMUST00000080171.3 |
||
| CDS-3UTR CAA 90 bp | GGTAACAGTGTTTCAGAAAATAGGACCAGTCAGAAATATTTGTGCAGGATCTGCTCAAACTTCTCTGGGTaGGGGAACTCTTTGCTATCA | + |
|
Preference number: 5 (lower is better) Translates to: GNSVSENRTSQKYLCRICSNFSG*GNSLLS Trigger: TGATAGCAAAGAGTTCCCCAACCCAGAGAAGTTTGA...GCAGATCCTGCACAAATATTTCTGACTGGTCCTATTTTCTGAAACACTGTTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068094.13 ENSMUST00000080171.3 |
||
| CDS-3UTR CAA 90 bp | AGGACCAGTCAGAAATATTTGTGCAGGATCTGCAAATTGGTAAATGTATGTTCAAGAACAGGAAATGTATaGCAAACCTGCAACCAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RTSQKYLCRICKLVNVCSRTGNV*QTCNQG Trigger: CCCTTGGTTGCAGGTTTGCAATACATTTCCTGTTCT...TGAACATACATTTACCAATTTGCAGATCCTGCACAAATATTTCTGACTGGTCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080171.3 |
||
| CDS-3UTR CAA 90 bp | GGTAACAGTGTTTCAGAAAATAGGACCAGTCAGAAATATTTGTGCAGGATCTGCGGGGTGCTCATTATCTaGGTTATTTCATTCAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GNSVSENRTSQKYLCRICGVLII*VISFSF Trigger: AAAACTGAATGAAATAACCAAGATAATGAGCACCCC...GCAGATCCTGCACAAATATTTCTGACTGGTCCTATTTTCTGAAACACTGTTACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068094.13 ENSMUST00000080171.3 |
||
| CDS-3UTR CAA 90 bp | TATTTAACTTGGAATCAGGTCCATATCATCACAGCATATGGTAACAGTGTTTCATCAAACTTCTCTGGGTaGGGGAACTCTTTGCTATCA | + |
|
Preference number: 5 (lower is better) Translates to: YLTWNQVHIITAYGNSVSSNFSG*GNSLLS Trigger: TGATAGCAAAGAGTTCCCCAACCCAGAGAAGTTTGA...TGAAACACTGTTACCATATGCTGTGATGATATGGACCTGATTCCAAGTTAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068094.13 ENSMUST00000080171.3 |
||
| CDS TCA 72 bp | AGAGCTGGAAAGCAGGAGGCACTGAGGCCAATCCAATaGGCATTGGGGTTACATCTATGTCCTTTGGGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: RAGKQEALRPIQ*ALGLHLCPLGE Trigger: TTCACCCAAAGGACATAGATGTAACCCCAATGCTCATTGGATTGGCCTCAGTGCCTCCTGCTTTCCAGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068094.13 ENSMUST00000080171.3 |
||
| CDS GCA 72 bp | GAACAGGAAATGTATTGCAAACCTGCAACCAAGGGGTaGTCATTATCTTGGTTATTTCATTCAGTTTTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: EQEMYCKPATKG*SLSWLFHSVFP Trigger: TGGAAAAACTGAATGAAATAACCAAGATAATGAGCACCCCTTGGTTGCAGGTTTGCAATACATTTCCTGTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080171.3 |
||