Pregenerated sensors for CYP2C39 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025003Ensembl transcript IDs: ENSMUST00000025968.5
Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | ACCTGGACAGGATTGCAGAAGGCAATAAAGGAGGGGGTCAGAATATGTGATCTCGGCCAGATTTTCAAGTaGAAATTCTGCTTGTTGGAT | + |
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Preference number: 4 (lower is better) Translates to: TWTGLQKAIKEGVRICDLGQIFK*KFCLLD Trigger: ATCCAACAAGCAGAATTTTCACTTGAAAATCTGGCC...GAGATCACATATTCTGACCCCCTCCTTTATTGCCTTCTGCAATCCTGTCCAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025968.5 |
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| CDS-3UTR CCA 90 bp | AATAAAGACCTGGACAGGATTGCAGAAGGCAATAAAGGAGGGGGTCAGAATATGGCAGATGACATTGCATaGAGCACAGCTCAGAATGAA | + |
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Preference number: 4 (lower is better) Translates to: NKDLDRIAEGNKGGGQNMADDIA*STAQNE Trigger: TTCATTCTGAGCTGTGCTCCATGCAATGTCATCTGC...CATATTCTGACCCCCTCCTTTATTGCCTTCTGCAATCCTGTCCAGGTCTTTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025968.5 |
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| CDS-3UTR GCA 90 bp | AATAAAGACCTGGACAGGATTGCAGAAGGCAATAAAGGAGGGGGTCAGAATATGTGTTGTCTCTGTCCCTaGAGCAAAGAGGTTATTGAT | + |
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Preference number: 4 (lower is better) Translates to: NKDLDRIAEGNKGGGQNMCCLCP*SKEVID Trigger: ATCAATAACCTCTTTGCTGCAGGGACAGAGACAACA...CATATTCTGACCCCCTCCTTTATTGCCTTCTGCAATCCTGTCCAGGTCTTTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025968.5 |
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| CDS-3UTR CCA 90 bp | GAGATAATACAAGTGCATTTGTGCTATAACTCCAGAAACCAGATGTGTTTGCTAGGACCTCATGAATCATaGCATCGGTATAGGGCATGT | + |
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Preference number: 4 (lower is better) Translates to: EIIQVHLCYNSRNQMCLLGPHES*HRYRAC Trigger: ACATGCCCTATACCGATGCCATGATTCATGAGGTCC...TAGCAAACACATCTGGTTTCTGGAGTTATAGCACAAATGCACTTGTATTATCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025968.5 |
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| CDS-3UTR GCA 90 bp | AATAAAGACCTGGACAGGATTGCAGAAGGCAATAAAGGAGGGGGTCAGAATATGTTTCTACCATTGGAATaGTTCCTCTATCAGAAAACT | + |
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Preference number: 4 (lower is better) Translates to: NKDLDRIAEGNKGGGQNMFLPLE*FLYQKT Trigger: AGTTTTCTGATAGAGGAAGCATTCCAATGGTAGAAA...CATATTCTGACCCCCTCCTTTATTGCCTTCTGCAATCCTGTCCAGGTCTTTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025968.5 |
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| CDS-3UTR GCA 90 bp | GAGATAATACAAGTGCATTTGTGCTATAACTCCAGAAACCAGATGTGTTTGCTAAACTCCTTGCTGTCATaGAGAACTGATGTCAGTGAC | + |
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Preference number: 4 (lower is better) Translates to: EIIQVHLCYNSRNQMCLLNSLLS*RTDVSD Trigger: GTCACTGACATCAGTTCTGCATGACAGCAAGGAGTT...TAGCAAACACATCTGGTTTCTGGAGTTATAGCACAAATGCACTTGTATTATCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025968.5 |
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| CDS-3UTR CCA 90 bp | GAGATAATACAAGTGCATTTGTGCTATAACTCCAGAAACCAGATGTGTTTGCTATTTGTGATGACTTCCTaGACAATAGTCAATGAGCAA | + |
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Preference number: 4 (lower is better) Translates to: EIIQVHLCYNSRNQMCLLFVMTS*TIVNEQ Trigger: TTGCTCATTGACTATTGTCCAGGAAGTCATCACAAA...TAGCAAACACATCTGGTTTCTGGAGTTATAGCACAAATGCACTTGTATTATCTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025968.5 |
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| CDS-3UTR CCA 90 bp | GAGATAATACAAGTGCATTTGTGCTATAACTCCAGAAACCAGATGTGTTTGCTAAATCTTTTCTACCATTaGAATGCTTCCTCTATCAGA | + |
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Preference number: 4 (lower is better) Translates to: EIIQVHLCYNSRNQMCLLNLFYH*NASSIR Trigger: TCTGATAGAGGAAGCATTCCAATGGTAGAAAAGATT...TAGCAAACACATCTGGTTTCTGGAGTTATAGCACAAATGCACTTGTATTATCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025968.5 |
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| CDS-3UTR CAA 90 bp | ACCTGGACAGGATTGCAGAAGGCAATAAAGGAGGGGGTCAGAATATGTGATCTCCAAACAACTCTGGGTTaGGGAACTCCTTGCTGTCAT | + |
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Preference number: 5 (lower is better) Translates to: TWTGLQKAIKEGVRICDLQTTLG*GTPCCH Trigger: ATGACAGCAAGGAGTTCCCAAACCCAGAGTTGTTTG...GAGATCACATATTCTGACCCCCTCCTTTATTGCCTTCTGCAATCCTGTCCAGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025968.5 |
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| CDS-3UTR CAA 90 bp | AATAAAGACCTGGACAGGATTGCAGAAGGCAATAAAGGAGGGGGTCAGAATATGACTGCACGGGGTATGTaGTTAGGGACAAGGTTGATG | + |
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Preference number: 5 (lower is better) Translates to: NKDLDRIAEGNKGGGQNMTARGM*LGTRLM Trigger: CATCAACCTTGTCCCTAACAACATACCCCGTGCAGT...CATATTCTGACCCCCTCCTTTATTGCCTTCTGCAATCCTGTCCAGGTCTTTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025968.5 |
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| CDS-3UTR CAA 90 bp | ACCTGGACAGGATTGCAGAAGGCAATAAAGGAGGGGGTCAGAATATGTGATCTCCAGGGCCATAGGCTTTaGAGAAATTGGTTAAGGATT | + |
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Preference number: 5 (lower is better) Translates to: TWTGLQKAIKEGVRICDLQGHRL*RNWLRI Trigger: AATCCTTAACCAATTTCTCAAAAGCCTATGGCCCTG...GAGATCACATATTCTGACCCCCTCCTTTATTGCCTTCTGCAATCCTGTCCAGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025968.5 |
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| CDS-3UTR CAA 90 bp | GAGATAATACAAGTGCATTTGTGCTATAACTCCAGAAACCAGATGTGTTTGCTAAGCAAGGGGAAATTATaGCAGACCTGCAACCATGGG | + |
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Preference number: 5 (lower is better) Translates to: EIIQVHLCYNSRNQMCLLSKGKL*QTCNHG Trigger: CCCATGGTTGCAGGTCTGCAATAATTTCCCCTTGCT...TAGCAAACACATCTGGTTTCTGGAGTTATAGCACAAATGCACTTGTATTATCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025968.5 |
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| CDS-3UTR CAA 90 bp | GCCAGGATGGAAGATGCCTTATTCCTGATAAGTAAAGAGGTAAATAAAGACCTGGGGGAGCTCAGAATCTaGACATTCTCATTTAGTTTT | + |
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Preference number: 5 (lower is better) Translates to: ARMEDALFLISKEVNKDLGELRI*TFSFSF Trigger: AAAACTAAATGAGAATGTCAAGATTCTGAGCTCCCC...CAGGTCTTTATTTACCTCTTTACTTATCAGGAATAAGGCATCTTCCATCCTGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025968.5 |
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| CDS-3UTR CAA 90 bp | GAGATAATACAAGTGCATTTGTGCTATAACTCCAGAAACCAGATGTGTTTGCTATTCCATCTGTTTCCATaGCTAAAAACAATGCCAAGG | + |
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Preference number: 5 (lower is better) Translates to: EIIQVHLCYNSRNQMCLLFHLFP*LKTMPR Trigger: CCTTGGCATTGTTTTTAGCAATGGAAACAGATGGAA...TAGCAAACACATCTGGTTTCTGGAGTTATAGCACAAATGCACTTGTATTATCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025968.5 |
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| CDS GCA 72 bp | TCAAACAACTCTGGGTTTGGGAACTCCTTGCTGTCATaGAGAACTGATGTCAGTGACGTTACTACTGTTGTT | + |
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Preference number: 6 (lower is better) Translates to: SNNSGFGNSLLS*RTDVSDVTTVV Trigger: AACAACAGTAGTAACGTCACTGACATCAGTTCTGCATGACAGCAAGGAGTTCCCAAACCCAGAGTTGTTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025968.5 |
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| CDS CAA 72 bp | GTGCTTGTTGTCTCTGTCCCTGCAGCAAAGAGGTTATaGATAGTGCAGGCCAGATTTTCAAGTGAAAATTCT | + |
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Preference number: 6 (lower is better) Translates to: VLVVSVPAAKRL*IVQARFSSENS Trigger: AGAATTTTCACTTGAAAATCTGGCCTGCACTATCAATAACCTCTTTGCTGCAGGGACAGAGACAACAAGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025968.5 |
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| CDS CAA 90 bp | AGGGTCGTGAGTGTGAAGCGCCTAATCTCTTTCCATCTGTTTCCATaGCTAAAAACAATGCCAAGGCCGTTATTAATCTTTTCTACCATT | + |
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Preference number: 6 (lower is better) Translates to: RVVSVKRLISFHLFP*LKTMPRPLLIFSTI Trigger: AATGGTAGAAAAGATTAATAACGGCCTTGGCATTGTTTTTAGCAATGGAAACAGATGGAAAGAGATTAGGCGCTTCACACTCACGACCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025968.5 |
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| CDS TCA 72 bp | AAAGAGGTTATTGATAGTGCAGGCCAGATTTTCAAGTaGAAATTCTGCTTGTTGGATGTGATTTGCCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: KEVIDSAGQIFK*KFCLLDVICLF Trigger: AAACAGGCAAATCACATCCAACAAGCAGAATTTTCACTTGAAAATCTGGCCTGCACTATCAATAACCTCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025968.5 |
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