Pregenerated sensors for CYP2C23 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025197Ensembl transcript IDs: ENSMUST00000026211.10, ENSMUST00000211830.2
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGAAAATGTGTGTGGGCTGGTACATTAATTTCTCTATTGAAACAGTaGCAGAATATAATTCTATTTCTGAAGCCACAGAAGAGCACGCAG | + |
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Preference number: 1 (lower is better) Translates to: GKCVWAGTLISLLKQ*QNIILFLKPQKSTQ Trigger: CTGCGTGCTCTTCTGTGGCTTCAGAAATAGAATTATATTCTGTCACTGTTTCAATAGAGAAATTAATGTACCAGCCCACACACATTTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| 3UTR-3UTR CCA 90 bp | ATAATTCTATTTCTGAAGCCACAGAAGAGCACGCAGCTGCTTGCAGGTGGCGTCACCCAGGTTTTAAGATaGAAACAAATGCCCACGTGC | + |
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Preference number: 2 (lower is better) Translates to: IILFLKPQKSTQLLAGGVTQVLR*KQMPTC Trigger: GCACGTGGGCATTTGTTTCCATCTTAAAACCTGGGT...GACGCCACCTGCAAGCAGCTGCGTGCTCTTCTGTGGCTTCAGAAATAGAATTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| 3UTR-3UTR CCA 90 bp | TGGGGTGAGAATTTATTTCATGAAGGTGACACAAACCACATAAATGCTTTTACGGCAGCTGCTTGCAGGTaGCGTCTGATGAGGGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: WGENLFHEGDTNHINAFTAAACR*RLMRAL Trigger: CAAGGCCCTCATCAGACGCCACCTGCAAGCAGCTGC...CGTAAAAGCATTTATGTGGTTTGTGTCACCTTCATGAAATAAATTCTCACCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| 3UTR-3UTR TCA 90 bp | GTGAGAATAGGAAAATGTGTGTGGGCTGGTACATTAATTTCTCTATTGAAACAGAGACAGCTGAGGAACTaGGACACCCTGCCTGTGTCC | + |
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Preference number: 2 (lower is better) Translates to: VRIGKCVWAGTLISLLKQRQLRN*DTLPVS Trigger: GGACACAGGCAGGGTGTCTCAGTTCCTCAGCTGTCT...CTGTTTCAATAGAGAAATTAATGTACCAGCCCACACACATTTTCCTATTCTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| 3UTR CCA 72 bp | TCTGAAGCCACAGAAGAGCACGCAGCTGCTTGCAGGTaGCGTCTGATGAGGGCCTTGTGGATCTGGTGTCAG | + |
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Preference number: 3 (lower is better) Translates to: SEATEEHAAACR*RLMRALWIWCQ Trigger: CTGACACCAGATCCACAAGGCCCTCATCAGACGCCACCTGCAAGCAGCTGCGTGCTCTTCTGTGGCTTCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| 3UTR GCA 72 bp | TCTATTTCTGAAGCCACAGAAGAGCACGCAGCTGCTTaGAGGTGGCGTCTGATGAGGGCCTTGTGGATCTGG | + |
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Preference number: 3 (lower is better) Translates to: SISEATEEHAAA*RWRLMRALWIW Trigger: CCAGATCCACAAGGCCCTCATCAGACGCCACCTGCAAGCAGCTGCGTGCTCTTCTGTGGCTTCAGAAATAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| 3UTR CCA 72 bp | GCAGCTGCTTGCAGGTGGCGTCTGATGAGGGCCTTGTaGATCTGGTGTCAGTTGTGCTTAGGGCCTAGTTTA | + |
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Preference number: 3 (lower is better) Translates to: AAACRWRLMRAL*IWCQLCLGPSL Trigger: TAAACTAGGCCCTAAGCACAACTGACACCAGATCCACAAGGCCCTCATCAGACGCCACCTGCAAGCAGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| 3UTR TCA 72 bp | GTGTGGGCTGGTACATTAATTTCTCTATTGAAACAGTaGCAGAATATAATTCTATTTCTGAAGCCACAGAAG | + |
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Preference number: 3 (lower is better) Translates to: VWAGTLISLLKQ*QNIILFLKPQK Trigger: CTTCTGTGGCTTCAGAAATAGAATTATATTCTGTCACTGTTTCAATAGAGAAATTAATGTACCAGCCCACAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| 3UTR CCA 72 bp | ATGCTTTTACGTGAGAATAGGAAAATGTGTGTGGGCTaGTACATTAATTTCTCTATTGAAACAGTGACAGAA | + |
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Preference number: 3 (lower is better) Translates to: MLLRENRKMCVG*YINFSIETVTE Trigger: TTCTGTCACTGTTTCAATAGAGAAATTAATGTACCAGCCCACACACATTTTCCTATTCTCACGTAAAAGCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| CDS-3UTR TCA 90 bp | GCTTGCAGGTGGCGTCTGATGAGGGCCTTGTGGATCTGGTGTCAGTTGTGCTTAGAGCACAGGCCAGGATaGAGGTGGGGTCAAAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: ACRWRLMRALWIWCQLCLEHRPG*RWGQRA Trigger: AGCCCTTTGACCCCACCTTCATCCTGGCCTGTGCTC...TAAGCACAACTGACACCAGATCCACAAGGCCCTCATCAGACGCCACCTGCAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| CDS-3UTR CCA 90 bp | GAGCACGCAGCTGCTTGCAGGTGGCGTCTGATGAGGGCCTTGTGGATCTGGTGTGGGTCCAGGGACTCCTaGTGCTCCTTCACTTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: EHAAACRWRLMRALWIWCGSRDS*CSFTFS Trigger: AGAAAAAGTGAAGGAGCACCAGGAGTCCCTGGACCC...ACACCAGATCCACAAGGCCCTCATCAGACGCCACCTGCAAGCAGCTGCGTGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| 3UTR CAA 72 bp | CACGCAGCTGCTTGCAGGTGGCGTCTGATGAGGGCCTaGTGGATCTGGTGTCAGTTGTGCTTAGGGCCTAGT | + |
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Preference number: 4 (lower is better) Translates to: HAAACRWRLMRA*WIWCQLCLGPS Trigger: ACTAGGCCCTAAGCACAACTGACACCAGATCCACAAGGCCCTCATCAGACGCCACCTGCAAGCAGCTGCGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| CDS-3UTR CCA 90 bp | AATTCTATTTCTGAAGCCACAGAAGAGCACGCAGCTGCTTGCAGGTGGCGTCTGCCCAATAATGGGAAGTaGAGTGGGGCCAGGGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: NSISEATEEHAAACRWRLPNNGK*SGARGQ Trigger: CTGCCCCCTGGCCCCACTCCACTTCCCATTATTGGG...CAGACGCCACCTGCAAGCAGCTGCGTGCTCTTCTGTGGCTTCAGAAATAGAATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| CDS-3UTR TCA 90 bp | CACGCAGCTGCTTGCAGGTGGCGTCTGATGAGGGCCTTGTGGATCTGGTGTCAGAGAGTGATGTATCTTTaGATCTCATGCAGCACGGCA | + |
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Preference number: 4 (lower is better) Translates to: HAAACRWRLMRALWIWCQRVMYL*ISCSTA Trigger: TGCCGTGCTGCATGAGATTCAAAGATACATCACTCT...CTGACACCAGATCCACAAGGCCCTCATCAGACGCCACCTGCAAGCAGCTGCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| CDS-3UTR TCA 90 bp | GAGCACGCAGCTGCTTGCAGGTGGCGTCTGATGAGGGCCTTGTGGATCTGGTGTATGCAGGGATGTCTTTaGGGTCCAATTGCAGTATAT | + |
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Preference number: 4 (lower is better) Translates to: EHAAACRWRLMRALWIWCMQGCL*GPIAVY Trigger: ATATACTGCAATTGGACCTCAAAGACATCCCTGCAT...ACACCAGATCCACAAGGCCCTCATCAGACGCCACCTGCAAGCAGCTGCGTGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| CDS-3UTR TCA 90 bp | CACGCAGCTGCTTGCAGGTGGCGTCTGATGAGGGCCTTGTGGATCTGGTGTCAGTTGGGAAACTCCTTTTaGTCCAACAAGATGGAAGAC | + |
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Preference number: 4 (lower is better) Translates to: HAAACRWRLMRALWIWCQLGNSF*SNKMED Trigger: GTCTTCCATCTTGTTGGATCAAAAGGAGTTTCCCAA...CTGACACCAGATCCACAAGGCCCTCATCAGACGCCACCTGCAAGCAGCTGCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| CDS-3UTR CCA 90 bp | GTCCTGGGAGCTTTCAGGACCCAGGTTTTAAGATGGAAACAAATGCCCACGTGCTCCTGGACCACAGCATaGGGCAGACTAGAAGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: VLGAFRTQVLRWKQMPTCSWTTA*GRLEGR Trigger: CCTTCCTTCTAGTCTGCCCCATGCTGTGGTCCAGGA...GCACGTGGGCATTTGTTTCCATCTTAAAACCTGGGTCCTGAAAGCTCCCAGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| CDS-3UTR TCA 90 bp | ATTTCTGAAGCCACAGAAGAGCACGCAGCTGCTTGCAGGTGGCGTCTGATGAGGCGATCAAGTTCTTCATaGACTTTGGCTTGCACCTCT | + |
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Preference number: 4 (lower is better) Translates to: ISEATEEHAAACRWRLMRRSSSS*TLACTS Trigger: AGAGGTGCAAGCCAAAGTTCATGAAGAACTTGATCG...CCTCATCAGACGCCACCTGCAAGCAGCTGCGTGCTCTTCTGTGGCTTCAGAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| CDS-3UTR TCA 90 bp | ATAATTCTATTTCTGAAGCCACAGAAGAGCACGCAGCTGCTTGCAGGTGGCGTCCATTTTTGTCCACACTaGAAGGAGGCTGAGGGACAT | + |
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Preference number: 4 (lower is better) Translates to: IILFLKPQKSTQLLAGGVHFCPH*KEAEGH Trigger: ATGTCCCTCAGCCTCCTTTCAGTGTGGACAAAAATG...GACGCCACCTGCAAGCAGCTGCGTGCTCTTCTGTGGCTTCAGAAATAGAATTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| CDS-3UTR GCA 90 bp | CACAAACCACATAAATGCTTTTACGTGAGAATAGGAAAATGTGTGTGGGCTGGTCACCGGGCTTCCTCCTaGACCCTCTCCTCTAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: HKPHKCFYVRIGKCVWAGHRASS*TLSSRL Trigger: AAGCCTAGAGGAGAGGGTGCAGGAGGAAGCCCGGTG...ACCAGCCCACACACATTTTCCTATTCTCACGTAAAAGCATTTATGTGGTTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| CDS-3UTR CCA 90 bp | GTCCTGGGAGCTTTCAGGACCCAGGTTTTAAGATGGAAACAAATGCCCACGTGCATTCCATGTCCCTTCTaGCTATCTTCGATAATGGGC | + |
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Preference number: 4 (lower is better) Translates to: VLGAFRTQVLRWKQMPTCIPCPF*LSSIMG Trigger: GCCCATTATCGAAGATAGCCAGAAGGGACATGGAAT...GCACGTGGGCATTTGTTTCCATCTTAAAACCTGGGTCCTGAAAGCTCCCAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| CDS-3UTR CCA 90 bp | AATTCTATTTCTGAAGCCACAGAAGAGCACGCAGCTGCTTGCAGGTGGCGTCTGGTTCTTCATGAACTTTaGCTTGCACCTCTGGATGCT | + |
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Preference number: 4 (lower is better) Translates to: NSISEATEEHAAACRWRLVLHEL*LAPLDA Trigger: AGCATCCAGAGGTGCAAGCCAAAGTTCATGAAGAAC...CAGACGCCACCTGCAAGCAGCTGCGTGCTCTTCTGTGGCTTCAGAAATAGAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| CDS-3UTR TCA 90 bp | GTCCTGGGAGCTTTCAGGACCCAGGTTTTAAGATGGAAACAAATGCCCACGTGCACCACCAAGCCTTTTTaGGAATTCTCTATGCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: VLGAFRTQVLRWKQMPTCTTKPF*EFSMLS Trigger: GGAAAGCATAGAGAATTCTCAAAAAGGCTTGGTGGT...GCACGTGGGCATTTGTTTCCATCTTAAAACCTGGGTCCTGAAAGCTCCCAGGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| CDS-3UTR TCA 90 bp | ATTTCTGAAGCCACAGAAGAGCACGCAGCTGCTTGCAGGTGGCGTCTGATGAGGAGTAGTCTGTTTTCTTaGAGCAGCCATTTTTATCCA | + |
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Preference number: 4 (lower is better) Translates to: ISEATEEHAAACRWRLMRSSLFS*SSHFYP Trigger: TGGATAAAAATGGCTGCTTCAAGAAAACAGACTACT...CCTCATCAGACGCCACCTGCAAGCAGCTGCGTGCTCTTCTGTGGCTTCAGAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| CDS-3UTR CCA 90 bp | ATTTCTGAAGCCACAGAAGAGCACGCAGCTGCTTGCAGGTGGCGTCTGATGAGGCATAGGTTGTACATCTaGATCCATATAGAGTTCAGT | + |
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Preference number: 4 (lower is better) Translates to: ISEATEEHAAACRWRLMRHRLYI*IHIEFS Trigger: ACTGAACTCTATATGGATCCAGATGTACAACCTATG...CCTCATCAGACGCCACCTGCAAGCAGCTGCGTGCTCTTCTGTGGCTTCAGAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| CDS-3UTR CCA 90 bp | GTCCTGGGAGCTTTCAGGACCCAGGTTTTAAGATGGAAACAAATGCCCACGTGCTGGATCAAACTTCTCTaGGTTGGGAAACTCCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: VLGAFRTQVLRWKQMPTCWIKLL*VGKLLL Trigger: CAAAAGGAGTTTCCCAACCCAGAGAAGTTTGATCCA...GCACGTGGGCATTTGTTTCCATCTTAAAACCTGGGTCCTGAAAGCTCCCAGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| CDS-3UTR GCA 90 bp | GTGAGAATAGGAAAATGTGTGTGGGCTGGTACATTAATTTCTCTATTGAAACAGACAGGAAGAGCTCCATaGGGGCCAAACCCTCGCCAA | + |
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Preference number: 4 (lower is better) Translates to: VRIGKCVWAGTLISLLKQTGRAP*GPNPRQ Trigger: TTGGCGAGGGTTTGGCCCGCATGGAGCTCTTCCTGT...CTGTTTCAATAGAGAAATTAATGTACCAGCCCACACACATTTTCCTATTCTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| CDS-3UTR GCA 90 bp | GTCCTGGGAGCTTTCAGGACCCAGGTTTTAAGATGGAAACAAATGCCCACGTGCTTTAGGGAAAATTTTTaGAGGATAGTGGTGAAGAAC | + |
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Preference number: 4 (lower is better) Translates to: VLGAFRTQVLRWKQMPTCFRENF*RIVVKN Trigger: GTTCTTCACCACTATCCTGCAAAAATTTTCCCTAAA...GCACGTGGGCATTTGTTTCCATCTTAAAACCTGGGTCCTGAAAGCTCCCAGGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| CDS-3UTR CCA 90 bp | TGCTTTTACGTGAGAATAGGAAAATGTGTGTGGGCTGGTACATTAATTTCTCTATCTTGTCCTTCATGCTaGGGGGTTGGTGGCGTCCAA | + |
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Preference number: 4 (lower is better) Translates to: CFYVRIGKCVWAGTLISLSCPSC*GVGGVQ Trigger: TTGGACGCCACCAACCCCCCAGCATGAAGGACAAGA...TAGAGAAATTAATGTACCAGCCCACACACATTTTCCTATTCTCACGTAAAAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| CDS-3UTR GCA 90 bp | TACGTGAGAATAGGAAAATGTGTGTGGGCTGGTACATTAATTTCTCTATTGAAACGAATCTCAGGGTGGTaGTGGTTGTCTCTGTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: YVRIGKCVWAGTLISLLKRISGW*WLSLCL Trigger: CAGGCACAGAGACAACCAGCACCACCCTGAGATTCG...TTTCAATAGAGAAATTAATGTACCAGCCCACACACATTTTCCTATTCTCACGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| CDS-3UTR TCA 90 bp | CACAAACCACATAAATGCTTTTACGTGAGAATAGGAAAATGTGTGTGGGCTGGTACCTCTCTCCTTCACTaGAAACAATTCCATGTCCCT | + |
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Preference number: 4 (lower is better) Translates to: HKPHKCFYVRIGKCVWAGTSLLH*KQFHVP Trigger: AGGGACATGGAATTGTTTTCAGTGAAGGAGAGAGGT...ACCAGCCCACACACATTTTCCTATTCTCACGTAAAAGCATTTATGTGGTTTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| CDS-3UTR TCA 90 bp | GTGAGAATAGGAAAATGTGTGTGGGCTGGTACATTAATTTCTCTATTGAAACAGGTGGGGTCAAAGGGCTaGGCTTCTGTTTTATGTAAC | + |
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Preference number: 4 (lower is better) Translates to: VRIGKCVWAGTLISLLKQVGSKG*ASVLCN Trigger: GTTACATAAAACAGAAGCTCAGCCCTTTGACCCCAC...CTGTTTCAATAGAGAAATTAATGTACCAGCCCACACACATTTTCCTATTCTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| CDS-3UTR GCA 90 bp | CTTTTACGTGAGAATAGGAAAATGTGTGTGGGCTGGTACATTAATTTCTCTATTTCCAGGGACTCCTGGTaGTCCTTCACTTTTTCTAGG | + |
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Preference number: 4 (lower is better) Translates to: LLRENRKMCVGWYINFSISRDSW*SFTFSR Trigger: CCTAGAAAAAGTGAAGGAGCACCAGGAGTCCCTGGA...AATAGAGAAATTAATGTACCAGCCCACACACATTTTCCTATTCTCACGTAAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| CDS-3UTR CCA 90 bp | CACAAACCACATAAATGCTTTTACGTGAGAATAGGAAAATGTGTGTGGGCTGGTCAAACTTCTCTGGGTTaGGAAACTCCTTTTGATCCA | + |
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Preference number: 4 (lower is better) Translates to: HKPHKCFYVRIGKCVWAGQTSLG*ETPFDP Trigger: TGGATCAAAAGGAGTTTCCCAACCCAGAGAAGTTTG...ACCAGCCCACACACATTTTCCTATTCTCACGTAAAAGCATTTATGTGGTTTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| CDS-3UTR CCA 90 bp | CTTTTACGTGAGAATAGGAAAATGTGTGTGGGCTGGTACATTAATTTCTCTATTTTTGATCCAACAAGATaGAAGACAGAAACGGGAACA | + |
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Preference number: 4 (lower is better) Translates to: LLRENRKMCVGWYINFSIFDPTR*KTETGT Trigger: TGTTCCCGTTTCTGTCTTCCATCTTGTTGGATCAAA...AATAGAGAAATTAATGTACCAGCCCACACACATTTTCCTATTCTCACGTAAAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| CDS-3UTR CAA 90 bp | GAGCACGCAGCTGCTTGCAGGTGGCGTCTGATGAGGGCCTTGTGGATCTGGTGTACAGGCCCATACTCTTaGGCCAGCTTGGAAAGCGAT | + |
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Preference number: 5 (lower is better) Translates to: EHAAACRWRLMRALWIWCTGPYS*ASLESD Trigger: ATCGCTTTCCAAGCTGGCCAAAGAGTATGGGCCTGT...ACACCAGATCCACAAGGCCCTCATCAGACGCCACCTGCAAGCAGCTGCGTGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| CDS-3UTR CAA 90 bp | GTCCTGGGAGCTTTCAGGACCCAGGTTTTAAGATGGAAACAAATGCCCACGTGCCCCCAGTGCGCATTTTaGTCCACACTGAAAGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: VLGAFRTQVLRWKQMPTCPQCAF*STLKGG Trigger: GCCTCCTTTCAGTGTGGACAAAAATGCGCACTGGGG...GCACGTGGGCATTTGTTTCCATCTTAAAACCTGGGTCCTGAAAGCTCCCAGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| CDS-3UTR CAA 90 bp | GTCCTGGGAGCTTTCAGGACCCAGGTTTTAAGATGGAAACAAATGCCCACGTGCTTCTCCTCCTCGATCTaGCTGAGGAAACAGTCGATG | + |
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Preference number: 5 (lower is better) Translates to: VLGAFRTQVLRWKQMPTCFSSSI*LRKQSM Trigger: CATCGACTGTTTCCTCAGCAAGATCGAGGAGGAGAA...GCACGTGGGCATTTGTTTCCATCTTAAAACCTGGGTCCTGAAAGCTCCCAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| CDS-3UTR CAA 90 bp | GCTTGCAGGTGGCGTCTGATGAGGGCCTTGTGGATCTGGTGTCAGTTGTGCTTAGTTGGGAAACTCCTTTaGATCCAACAAGATGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: ACRWRLMRALWIWCQLCLVGKLL*IQQDGR Trigger: TCTTCCATCTTGTTGGATCAAAAGGAGTTTCCCAAC...TAAGCACAACTGACACCAGATCCACAAGGCCCTCATCAGACGCCACCTGCAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| CDS-3UTR CAA 90 bp | ATAATTCTATTTCTGAAGCCACAGAAGAGCACGCAGCTGCTTGCAGGTGGCGTCAGGTTGAGGAATGTCTaGTCATTGTATGGGAATCGC | + |
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Preference number: 5 (lower is better) Translates to: IILFLKPQKSTQLLAGGVRLRNV*SLYGNR Trigger: GCGATTCCCATACAATGACAAGACATTCCTCAACCT...GACGCCACCTGCAAGCAGCTGCGTGCTCTTCTGTGGCTTCAGAAATAGAATTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| CDS-3UTR CAA 90 bp | ATAATTCTATTTCTGAAGCCACAGAAGAGCACGCAGCTGCTTGCAGGTGGCGTCAAATCAGATTTCAGGTaGTGTTTCTCCTCCTCGATC | + |
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Preference number: 5 (lower is better) Translates to: IILFLKPQKSTQLLAGGVKSDFR*CFSSSI Trigger: GATCGAGGAGGAGAAACACAACCTGAAATCTGATTT...GACGCCACCTGCAAGCAGCTGCGTGCTCTTCTGTGGCTTCAGAAATAGAATTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| CDS GCA 90 bp | CAGAGTGTAAACAGGCCCATACTCTTTGGCCAGCTTGGAAAGCGATaGAGGGATGTCTTTGAGGTCCAATTGCAGTATATTCCCAATAAT | + |
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Preference number: 5 (lower is better) Translates to: QSVNRPILFGQLGKR*RDVFEVQLQYIPNN Trigger: ATTATTGGGAATATACTGCAATTGGACCTCAAAGACATCCCTGCATCGCTTTCCAAGCTGGCCAAAGAGTATGGGCCTGTTTACACTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026211.10 ENSMUST00000211830.2 |
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| CDS-3UTR CAA 90 bp | CACAAACCACATAAATGCTTTTACGTGAGAATAGGAAAATGTGTGTGGGCTGGTCACCACCAAGCCTTTTaGAGAATTCTCTATGCTTTC | + |
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Preference number: 5 (lower is better) Translates to: HKPHKCFYVRIGKCVWAGHHQAF*RILYAF Trigger: GAAAGCATAGAGAATTCTCAAAAAGGCTTGGTGGTG...ACCAGCCCACACACATTTTCCTATTCTCACGTAAAAGCATTTATGTGGTTTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| CDS-3UTR CAA 90 bp | CTTTTACGTGAGAATAGGAAAATGTGTGTGGGCTGGTACATTAATTTCTCTATTGAGAGTGATGTATCTTaGAATCTCATGCAGCACGGC | + |
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Preference number: 5 (lower is better) Translates to: LLRENRKMCVGWYINFSIESDVS*NLMQHG Trigger: GCCGTGCTGCATGAGATTCAAAGATACATCACTCTC...AATAGAGAAATTAATGTACCAGCCCACACACATTTTCCTATTCTCACGTAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| CDS-3UTR CAA 90 bp | GTGAGAATAGGAAAATGTGTGTGGGCTGGTACATTAATTTCTCTATTGAAACAGAAAAGGTCCATGAGGTaGAGGAATGTCTTGTCATTG | + |
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Preference number: 5 (lower is better) Translates to: VRIGKCVWAGTLISLLKQKRSMR*RNVLSL Trigger: CAATGACAAGACATTCCTCAACCTCATGGACCTTTT...CTGTTTCAATAGAGAAATTAATGTACCAGCCCACACACATTTTCCTATTCTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026211.10 |
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| CDS TCA 72 bp | CAGATTTCAGGTTGTGTTTCTCCTCCTCGATCTTGCTaGGGAAACAGTCGATGTAATCCCGAGGGTTGGCGG | + |
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Preference number: 6 (lower is better) Translates to: QISGCVSPPRSC*GNSRCNPEGWR Trigger: CCGCCAACCCTCGGGATTACATCGACTGTTTCCTCAGCAAGATCGAGGAGGAGAAACACAACCTGAAATCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026211.10 ENSMUST00000211830.2 |
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| CDS TCA 72 bp | GGTTGGTGGCGTCCAATCACACGATCAAGTTCTTCATaGACTTTGGCTTGCACCTCTGGATGCTTGACAAGG | + |
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Preference number: 6 (lower is better) Translates to: GWWRPITRSSSS*TLACTSGCLTR Trigger: CCTTGTCAAGCATCCAGAGGTGCAAGCCAAAGTTCATGAAGAACTTGATCGTGTGATTGGACGCCACCAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026211.10 ENSMUST00000211830.2 |
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| CDS TCA 72 bp | AGAAGCGTCGCAGGAGTTTCCACCTCTCTCCTTCACTaGAAACAATTCCATGTCCCTTCTGGCTATCTTCGA | + |
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Preference number: 6 (lower is better) Translates to: RSVAGVSTSLLH*KQFHVPSGYLR Trigger: TCGAAGATAGCCAGAAGGGACATGGAATTGTTTTCAGTGAAGGAGAGAGGTGGAAACTCCTGCGACGCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026211.10 ENSMUST00000211830.2 |
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| CDS CCA 72 bp | CTCTCTCCTTCACTGAAAACAATTCCATGTCCCTTCTaGCTATCTTCGATAATGGGCAGAGGTCCTCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: LSPSLKTIPCPF*LSSIMGRGPLP Trigger: TGGGAGAGGACCTCTGCCCATTATCGAAGATAGCCAGAAGGGACATGGAATTGTTTTCAGTGAAGGAGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026211.10 ENSMUST00000211830.2 |
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| CDS CCA 72 bp | ACGATCAAGTTCTTCATGAACTTTGGCTTGCACCTCTaGATGCTTGACAAGGAGCAGAAGCCCGAATCTCAG | + |
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Preference number: 6 (lower is better) Translates to: TIKFFMNFGLHL*MLDKEQKPESQ Trigger: CTGAGATTCGGGCTTCTGCTCCTTGTCAAGCATCCAGAGGTGCAAGCCAAAGTTCATGAAGAACTTGATCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026211.10 ENSMUST00000211830.2 |
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| CDS GCA 72 bp | AACAGGCCCATACTCTTTGGCCAGCTTGGAAAGCGATaGAGGGATGTCTTTGAGGTCCAATTGCAGTATATT | + |
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Preference number: 6 (lower is better) Translates to: NRPILFGQLGKR*RDVFEVQLQYI Trigger: AATATACTGCAATTGGACCTCAAAGACATCCCTGCATCGCTTTCCAAGCTGGCCAAAGAGTATGGGCCTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026211.10 ENSMUST00000211830.2 |
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| CDS CAA 72 bp | CTTGGAAAGCGATGCAGGGATGTCTTTGAGGTCCAATaGCAGTATATTCCCAATAATGGGAAGTGGAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: LGKRCRDVFEVQ*QYIPNNGKWSG Trigger: CCCACTCCACTTCCCATTATTGGGAATATACTGCAATTGGACCTCAAAGACATCCCTGCATCGCTTTCCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026211.10 ENSMUST00000211830.2 |
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| CDS CCA 72 bp | AAGGTCCATGAGGTTGAGGAATGTCTTGTCATTGTATaGGAATCGCTCGTTGAAAAGGATGGAGCAGATCAC | + |
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Preference number: 6 (lower is better) Translates to: KVHEVEECLVIV*ESLVEKDGADH Trigger: GTGATCTGCTCCATCCTTTTCAACGAGCGATTCCCATACAATGACAAGACATTCCTCAACCTCATGGACCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026211.10 ENSMUST00000211830.2 |
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| CDS CAA 72 bp | TTTAAAAGGTCCATGAGGTTGAGGAATGTCTTGTCATaGTATGGGAATCGCTCGTTGAAAAGGATGGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: FKRSMRLRNVLS*YGNRSLKRMEQ Trigger: CTGCTCCATCCTTTTCAACGAGCGATTCCCATACAATGACAAGACATTCCTCAACCTCATGGACCTTTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026211.10 ENSMUST00000211830.2 |
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| CDS CAA 72 bp | ATGGCCAAATTCTCCAGATTAAAATCAGATTTCAGGTaGTGTTTCTCCTCCTCGATCTTGCTGAGGAAACAG | + |
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Preference number: 6 (lower is better) Translates to: MAKFSRLKSDFR*CFSSSILLRKQ Trigger: CTGTTTCCTCAGCAAGATCGAGGAGGAGAAACACAACCTGAAATCTGATTTTAATCTGGAGAATTTGGCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026211.10 ENSMUST00000211830.2 |
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