Pregenerated sensors for CYP2B19 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066704Ensembl transcript IDs: ENSMUST00000077855.8
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGATCCTTGTCTAAGAAAGAGAATGGGAAAGTCTGTGAAGGTGTGTaGCTGTGGCCCGCACAGTACAGGGACCTGAGAAGCAGGGACAGC | + |
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Preference number: 1 (lower is better) Translates to: RSLSKKENGKVCEGV*LWPAQYRDLRSRDS Trigger: GCTGTCCCTGCTTCTCAGGTCCCTGTACTGTGCGGGCCACAGTCACACACCTTCACAGACTTTCCCATTCTCTTTCTTAGACAAGGATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| 3UTR GCA 90 bp | AAGCCATGGCCTCCAGAAGTCTCTCTGTCCAGACATCAAGAAAGGTaGTTCACTGGGTTTTCCCATTCCATTCACAAGGGACGGAAATGG | + |
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Preference number: 1 (lower is better) Translates to: KPWPPEVSLSRHQER*FTGFSHSIHKGRKW Trigger: CCATTTCCGTCCCTTGTGAATGGAATGGGAAAACCCAGTGAAGCACCTTTCTTGATGTCTGGACAGAGAGACTTCTGGAGGCCATGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| 3UTR CCA 90 bp | GCCTCCAGAAGTCTCTCTGTCCAGACATCAAGAAAGGTGCTTCACTaGGTTTTCCCATTCCATTCACAAGGGACGGAAATGGGGACACAT | + |
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Preference number: 1 (lower is better) Translates to: ASRSLSVQTSRKVLH*VFPFHSQGTEMGTH Trigger: ATGTGTCCCCATTTCCGTCCCTTGTGAATGGAATGGGAAAACCCAGTGAAGCACCTTTCTTGATGTCTGGACAGAGAGACTTCTGGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| 3UTR TCA 90 bp | AGGGGAATGTGGGAGAATCTAAGCAGAGTCATTCAGTTCAGGGCCTaGGGGCTGAGGAGATCCTTGTCTAAGAAAGAGAATGGGAAAGTC | + |
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Preference number: 1 (lower is better) Translates to: RGMWENLSRVIQFRA*GLRRSLSKKENGKV Trigger: GACTTTCCCATTCTCTTTCTTAGACAAGGATCTCCTCAGCCCTCAGGCCCTGAACTGAATGACTCTGCTTAGATTCTCCCACATTCCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| 3UTR-3UTR TCA 90 bp | CACATGGAGTCAGGTCAGTCCATTGACACAGAAGTCAGACTGTGTGTGGCAGGGGGACACATGCGAACCTaGAGTCCACTGACTCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: HMESGQSIDTEVRLCVAGGHMRT*SPLTLL Trigger: GAGGAGAGTCAGTGGACTTCAGGTTCGCATGTGTCC...CCCTGCCACACACAGTCTGACTTCTGTGTCAATGGACTGACCTGACTCCATGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| 3UTR-3UTR TCA 90 bp | AGGAGGTCGAGGCAGATGGGTTTTAGTGAGCTCAAGACCAACCAGGTCTACATATCAGGGCCTGAGGGCTaGGGAGATCCTTGTCTAAGA | + |
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Preference number: 2 (lower is better) Translates to: RRSRQMGFSELKTNQVYISGPEG*GDPCLR Trigger: TCTTAGACAAGGATCTCCTCAGCCCTCAGGCCCTGA...TATGTAGACCTGGTTGGTCTTGAGCTCACTAAAACCCATCTGCCTCGACCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| 3UTR-3UTR CCA 90 bp | AGGAGGTCGAGGCAGATGGGTTTTAGTGAGCTCAAGACCAACCAGGTCTACATAATGTGGGGGAGGTTATaGAGAGAGGGACGAGGGACT | + |
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Preference number: 2 (lower is better) Translates to: RRSRQMGFSELKTNQVYIMWGRL*REGRGT Trigger: AGTCCCTCGTCCCTCTCTCCATAACCTCCCCCACAT...TATGTAGACCTGGTTGGTCTTGAGCTCACTAAAACCCATCTGCCTCGACCTCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| 3UTR-3UTR TCA 90 bp | CACAAACCTTTAATCTCAGCACTCAGGAGGTCGAGGCAGATGGGTTTTAGTGAGGAATGGGAAAGTCTGTaGAGGTGTGTGACTGTGGCC | + |
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Preference number: 2 (lower is better) Translates to: HKPLISALRRSRQMGFSEEWESL*RCVTVA Trigger: GGCCACAGTCACACACCTTCACAGACTTTCCCATTC...CTCACTAAAACCCATCTGCCTCGACCTCCTGAGTGCTGAGATTAAAGGTTTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| 3UTR-3UTR GCA 90 bp | TTATGGAGAGAGGGACGAGGGACTGATCTTTTAATAGGTCAGGGTTTGGGGTGGAGACATCAAGAAAGGTaGTTCACTGGGTTTTCCCAT | + |
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Preference number: 2 (lower is better) Translates to: LWREGRGTDLLIGQGLGWRHQER*FTGFSH Trigger: ATGGGAAAACCCAGTGAAGCACCTTTCTTGATGTCT...CCACCCCAAACCCTGACCTATTAAAAGATCAGTCCCTCGTCCCTCTCTCCATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| 3UTR-3UTR CCA 90 bp | AGGAGGTCGAGGCAGATGGGTTTTAGTGAGCTCAAGACCAACCAGGTCTACATAGGTTTGGGGTGGTGTTaGTTAAATGTGACAAAATAC | + |
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Preference number: 2 (lower is better) Translates to: RRSRQMGFSELKTNQVYIGLGWC*LNVTKY Trigger: GTATTTTGTCACATTTAACCAACACCACCCCAAACC...TATGTAGACCTGGTTGGTCTTGAGCTCACTAAAACCCATCTGCCTCGACCTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| 3UTR-3UTR TCA 90 bp | CACAAACCTTTAATCTCAGCACTCAGGAGGTCGAGGCAGATGGGTTTTAGTGAGATGTATATAGGATTTTaGGGTTGGTCTGAGCTACAT | + |
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Preference number: 2 (lower is better) Translates to: HKPLISALRRSRQMGFSEMYIGF*GWSELH Trigger: ATGTAGCTCAGACCAACCTCAAAATCCTATATACAT...CTCACTAAAACCCATCTGCCTCGACCTCCTGAGTGCTGAGATTAAAGGTTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| 3UTR TCA 72 bp | AAGGTGTGTGACTGTGGCCCGCACAGTACAGGGACCTaGGAAGCAGGGACAGCTGACAAAAGATCACATTGT | + |
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Preference number: 3 (lower is better) Translates to: KVCDCGPHSTGT*EAGTADKRSHC Trigger: ACAATGTGATCTTTTGTCAGCTGTCCCTGCTTCTCAGGTCCCTGTACTGTGCGGGCCACAGTCACACACCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| 3UTR TCA 72 bp | TCTAAGAAAGAGAATGGGAAAGTCTGTGAAGGTGTGTaGCTGTGGCCCGCACAGTACAGGGACCTGAGAAGC | + |
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Preference number: 3 (lower is better) Translates to: SKKENGKVCEGV*LWPAQYRDLRS Trigger: GCTTCTCAGGTCCCTGTACTGTGCGGGCCACAGTCACACACCTTCACAGACTTTCCCATTCTCTTTCTTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| 3UTR TCA 72 bp | CAGTGTGATCTTGTCCCCCGCTACTCACTAGCAGTGTaGTGTCATCATGTGGCCTGTCACTCATCTATAAAG | + |
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Preference number: 3 (lower is better) Translates to: QCDLVPRYSLAV*CHHVACHSSIK Trigger: CTTTATAGATGAGTGACAGGCCACATGATGACATCACACTGCTAGTGAGTAGCGGGGGACAAGATCACACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| 3UTR TCA 72 bp | CCCGCACAGTACAGGGACCTGAGAAGCAGGGACAGCTaGCAAAAGATCACATTGTTGCTTTTTCTACAAGAC | + |
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Preference number: 3 (lower is better) Translates to: PAQYRDLRSRDS*QKITLLLFLQD Trigger: GTCTTGTAGAAAAAGCAACAATGTGATCTTTTGTCAGCTGTCCCTGCTTCTCAGGTCCCTGTACTGTGCGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| 3UTR GCA 72 bp | CCTCCAGAAGTCTCTCTGTCCAGACATCAAGAAAGGTaGTTCACTGGGTTTTCCCATTCCATTCACAAGGGA | + |
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Preference number: 3 (lower is better) Translates to: PPEVSLSRHQER*FTGFSHSIHKG Trigger: TCCCTTGTGAATGGAATGGGAAAACCCAGTGAAGCACCTTTCTTGATGTCTGGACAGAGAGACTTCTGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| 3UTR TCA 72 bp | TGGGAGAATCTAAGCAGAGTCATTCAGTTCAGGGCCTaGGGGCTGAGGAGATCCTTGTCTAAGAAAGAGAAT | + |
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Preference number: 3 (lower is better) Translates to: WENLSRVIQFRA*GLRRSLSKKEN Trigger: ATTCTCTTTCTTAGACAAGGATCTCCTCAGCCCTCAGGCCCTGAACTGAATGACTCTGCTTAGATTCTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| 3UTR CCA 72 bp | TTAACAAGCATGAGAGAGGTGACTCAGAACAAGCCATaGCCTCCAGAAGTCTCTCTGTCCAGACATCAAGAA | + |
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Preference number: 3 (lower is better) Translates to: LTSMREVTQNKP*PPEVSLSRHQE Trigger: TTCTTGATGTCTGGACAGAGAGACTTCTGGAGGCCATGGCTTGTTCTGAGTCACCTCTCTCATGCTTGTTAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| 3UTR TCA 72 bp | CCACACTCAAACAAAATCACAGCAAGGGTTCTTTCTTaGTCGGTGAGGAAGGCTTTGTGTATTTATGAGATC | + |
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Preference number: 3 (lower is better) Translates to: PHSNKITARVLS*SVRKALCIYEI Trigger: GATCTCATAAATACACAAAGCCTTCCTCACCGATCAAGAAAGAACCCTTGCTGTGATTTTGTTTGAGTGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| 3UTR TCA 72 bp | CAGAATTCAAGACATCTTTGGATGTATATAGGATTTTaGGGTTGGTCTGAGCTACATGAGACTCTGTCTCAG | + |
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Preference number: 3 (lower is better) Translates to: QNSRHLWMYIGF*GWSELHETLSQ Trigger: CTGAGACAGAGTCTCATGTAGCTCAGACCAACCTCAAAATCCTATATACATCCAAAGATGTCTTGAATTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS-3UTR CCA 90 bp | GTGACTGTGGCCCGCACAGTACAGGGACCTGAGAAGCAGGGACAGCTGACAAAACAGGGGACGAGGTCCTaGTGGGAAGTGGCCATGGGT | + |
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Preference number: 4 (lower is better) Translates to: VTVARTVQGPEKQGQLTKQGTRS*WEVAMG Trigger: ACCCATGGCCACTTCCCACCAGGACCTCGTCCCCTG...TTTTGTCAGCTGTCCCTGCTTCTCAGGTCCCTGTACTGTGCGGGCCACAGTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS-3UTR GCA 90 bp | GTGACTGTGGCCCGCACAGTACAGGGACCTGAGAAGCAGGGACAGCTGACAAAAATTCATTGCGGGCAATaGCTTCTCCAAGACAAATGC | + |
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Preference number: 4 (lower is better) Translates to: VTVARTVQGPEKQGQLTKIHCGQ*LLQDKC Trigger: GCATTTGTCTTGGAGAAGGCATTGCCCGCAATGAAT...TTTTGTCAGCTGTCCCTGCTTCTCAGGTCCCTGTACTGTGCGGGCCACAGTCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS-3UTR TCA 90 bp | TCTCTCTGTCCAGACATCAAGAAAGGTGCTTCACTGGGTTTTCCCATTCCATTCTCAAGAAGCCTGTGGTaGGAGCGAGAAGGAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: SLCPDIKKGASLGFPIPFSRSLW*EREGAA Trigger: TGCTGCTCCTTCTCGCTCTCACCACAGGCTTCTTGA...GAATGGAATGGGAAAACCCAGTGAAGCACCTTTCTTGATGTCTGGACAGAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS-3UTR TCA 90 bp | CACAAACCTTTAATCTCAGCACTCAGGAGGTCGAGGCAGATGGGTTTTAGTGAGTGGGTCATGAAGAGCTaGACTCAGGATGGGGTACAC | + |
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Preference number: 4 (lower is better) Translates to: HKPLISALRRSRQMGFSEWVMKS*TQDGVH Trigger: GTGTACCCCATCCTGAGTTCAGCTCTTCATGACCCA...CTCACTAAAACCCATCTGCCTCGACCTCCTGAGTGCTGAGATTAAAGGTTTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS-3UTR CCA 90 bp | CTCAGAACAAGCCATGGCCTCCAGAAGTCTCTCTGTCCAGACATCAAGAAAGGTACTGTGGGGGTGTTTTaGTTGCACCACTGTTATTGG | + |
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Preference number: 4 (lower is better) Translates to: LRTSHGLQKSLCPDIKKGTVGVF*LHHCYW Trigger: CCAATAACAGTGGTGCAACCAAAACACCCCCACAGT...ACCTTTCTTGATGTCTGGACAGAGAGACTTCTGGAGGCCATGGCTTGTTCTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| 3UTR CAA 72 bp | CTTTTTCTACAAGACACATGGAGTCAGGTCAGTCCATaGACACAGAAGTCAGACTGTGTGTGGCAGGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: LFLQDTWSQVSP*TQKSDCVWQGR Trigger: CCTACCCTGCCACACACAGTCTGACTTCTGTGTCAATGGACTGACCTGACTCCATGTGTCTTGTAGAAAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS-3UTR GCA 90 bp | AGGAGGTCGAGGCAGATGGGTTTTAGTGAGCTCAAGACCAACCAGGTCTACATATTCATTTGTCTTCAGTaGCCCATTGGCATCCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: RRSRQMGFSELKTNQVYIFICLQ*PIGIQE Trigger: TTCCTGGATGCCAATGGGGCACTGAAGACAAATGAA...TATGTAGACCTGGTTGGTCTTGAGCTCACTAAAACCCATCTGCCTCGACCTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS-3UTR CCA 90 bp | AGGTTATGGAGAGAGGGACGAGGGACTGATCTTTTAATAGGTCAGGGTTTGGGGTTTCCTGCAGGTTTTTaGAGATTTGTCTGTGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: RLWREGRGTDLLIGQGLGFPAGF*RFVCGH Trigger: GTGCCCACAGACAAATCTCCAAAAACCTGCAGGAAA...CCCCAAACCCTGACCTATTAAAAGATCAGTCCCTCGTCCCTCTCTCCATAACCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS-3UTR TCA 90 bp | AGGTTATGGAGAGAGGGACGAGGGACTGATCTTTTAATAGGTCAGGGTTTGGGGTTGGCTGACTTTGGCTaGCTAAGAATATCAAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: RLWREGRGTDLLIGQGLGLADFG*LRISRS Trigger: GCTTCTTGATATTCTTAGTCAGCCAAAGTCAGCCAA...CCCCAAACCCTGACCTATTAAAAGATCAGTCCCTCGTCCCTCTCTCCATAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS-3UTR TCA 90 bp | TTATGGAGAGAGGGACGAGGGACTGATCTTTTAATAGGTCAGGGTTTGGGGTGGAGATCTGTAAATCTCTaGATCTCATGGATGACTGCA | + |
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Preference number: 4 (lower is better) Translates to: LWREGRGTDLLIGQGLGWRSVNL*ISWMTA Trigger: TGCAGTCATCCATGAGATTCAGAGATTTACAGATCT...CCACCCCAAACCCTGACCTATTAAAAGATCAGTCCCTCGTCCCTCTCTCCATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS-3UTR GCA 90 bp | CTCAGAACAAGCCATGGCCTCCAGAAGTCTCTCTGTCCAGACATCAAGAAAGGTATCAGATTTAGCAGATaGAGGAATTGGTGGTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: LRTSHGLQKSLCPDIKKGIRFSR*RNWWSL Trigger: CAAAGACCACCAATTCCTGCATCTGCTAAATCTGAT...ACCTTTCTTGATGTCTGGACAGAGAGACTTCTGGAGGCCATGGCTTGTTCTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| 3UTR CAA 72 bp | ATCTCTAGTCCGCTAGCACTGATCATGGAGTCTAGATaGCTCTGGCAAGTAGGGACTATGACTGTTAACAAG | + |
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Preference number: 4 (lower is better) Translates to: ISSPLALIMESR*LWQVGTMTVNK Trigger: CTTGTTAACAGTCATAGTCCCTACTTGCCAGAGCAATCTAGACTCCATGATCAGTGCTAGCGGACTAGAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS-3UTR TCA 90 bp | AGGTTATGGAGAGAGGGACGAGGGACTGATCTTTTAATAGGTCAGGGTTTGGGGTCTCCATATTTTTCTTaGAGCTGTATGAAAGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: RLWREGRGTDLLIGQGLGSPYFS*SCMKEL Trigger: GAGCTCTTTCATACAGCTTCAAGAAAAATATGGAGA...CCCCAAACCCTGACCTATTAAAAGATCAGTCCCTCGTCCCTCTCTCCATAACCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS-3UTR TCA 90 bp | AAAGATCACATTGTTGCTTTTTCTACAAGACACATGGAGTCAGGTCAGTCCATTCAACGGGACAAGAAGTaGATCTGGTACTGTGGGGGT | + |
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Preference number: 4 (lower is better) Translates to: KDHIVAFSTRHMESGQSIQRDKK*IWYCGG Trigger: ACCCCCACAGTACCAGATTCACTTCTTGTCCCGTTG...AATGGACTGACCTGACTCCATGTGTCTTGTAGAAAAAGCAACAATGTGATCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS-3UTR CCA 90 bp | ACAGCTGACAAAAGATCACATTGTTGCTTTTTCTACAAGACACATGGAGTCAGGGAGAAAGCCTCAGCTTaGTTCACCAGAGCTTCCCTT | + |
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Preference number: 4 (lower is better) Translates to: TADKRSHCCFFYKTHGVREKASA*FTRASL Trigger: AAGGGAAGCTCTGGTGAACCAAGCTGAGGCTTTCTC...CCTGACTCCATGTGTCTTGTAGAAAAAGCAACAATGTGATCTTTTGTCAGCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS-3UTR CCA 90 bp | TCTCTCTGTCCAGACATCAAGAAAGGTGCTTCACTGGGTTTTCCCATTCCATTCCAGTGTATGGCATTTTaGTTCTATCATCAAGAGTCG | + |
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Preference number: 4 (lower is better) Translates to: SLCPDIKKGASLGFPIPFQCMAF*FYHQES Trigger: CGACTCTTGATGATAGAACCAAAATGCCATACACTG...GAATGGAATGGGAAAACCCAGTGAAGCACCTTTCTTGATGTCTGGACAGAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS-3UTR CCA 90 bp | TCTCTCTGTCCAGACATCAAGAAAGGTGCTTCACTGGGTTTTCCCATTCCATTCGACTGCATCAGTGTATaGCATTTTGGTTCTATCATC | + |
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Preference number: 4 (lower is better) Translates to: SLCPDIKKGASLGFPIPFDCISV*HFGSII Trigger: GATGATAGAACCAAAATGCCATACACTGATGCAGTC...GAATGGAATGGGAAAACCCAGTGAAGCACCTTTCTTGATGTCTGGACAGAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS-3UTR CCA 90 bp | AAAGATCACATTGTTGCTTTTTCTACAAGACACATGGAGTCAGGTCAGTCCATTACACCTCAGTGTTCTTaGGGATCAGGTATCCTCGGA | + |
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Preference number: 4 (lower is better) Translates to: KDHIVAFSTRHMESGQSITPQCS*GSGILG Trigger: TCCGAGGATACCTGATCCCCAAGAACACTGAGGTGT...AATGGACTGACCTGACTCCATGTGTCTTGTAGAAAAAGCAACAATGTGATCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS-3UTR TCA 90 bp | GATGCCAGTAGTGGAAAACAGATCCAGAATTCAAGACATCTTTGGATGTATATATTTCTTGAAGCTGTATaGAAGAGCTCAGAAGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: DASSGKQIQNSRHLWMYIFLEAV*KSSEGP Trigger: GGGGCCTTCTGAGCTCTTTCATACAGCTTCAAGAAA...TATATACATCCAAAGATGTCTTGAATTCTGGATCTGTTTTCCACTACTGGCATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS-3UTR GCA 90 bp | ACAGCTGACAAAAGATCACATTGTTGCTTTTTCTACAAGACACATGGAGTCAGGGGAGCAGATGATATTTaGTACGATGCACTGGAAGTA | + |
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Preference number: 4 (lower is better) Translates to: TADKRSHCCFFYKTHGVRGADDI*YDALEV Trigger: TACTTCCAGTGCATCGTAGCAAATATCATCTGCTCC...CCTGACTCCATGTGTCTTGTAGAAAAAGCAACAATGTGATCTTTTGTCAGCTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS-3UTR TCA 90 bp | GATGCCAGTAGTGGAAAACAGATCCAGAATTCAAGACATCTTTGGATGTATATACTGTGGAGAAGGGCATaGAAGCTTCATTTGTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: DASSGKQIQNSRHLWMYILWRRA*KLHLSS Trigger: TGAAGACAAATGAAGCTTTCATGCCCTTCTCCACAG...TATATACATCCAAAGATGTCTTGAATTCTGGATCTGTTTTCCACTACTGGCATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS TCA 90 bp | GGCAGGGGACGAGGTCCTGGTGGGAAGTGGCCATGGGTCTTTGGCTaGCTTTGGCTGACTAAGAATATCAAGAAGCCTGTGGTGAGAGCG | + |
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Preference number: 5 (lower is better) Translates to: GRGRGPGGKWPWVFG*LWLTKNIKKPVVRA Trigger: CGCTCTCACCACAGGCTTCTTGATATTCTTAGTCAGCCAAAGTCAGCCAAAGACCCATGGCCACTTCCCACCAGGACCTCGTCCCCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS CCA 90 bp | CCAACGTTCCCCACTGGAAAAGATCACACCATATCCCTGAACAATTaGATCAAGCACAGCAACTGTCCCTCGGCCAGAGAAAGCCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: PTFPTGKDHTISLNN*IKHSNCPSARESLS Trigger: GCTGAGGCTTTCTCTGGCCGAGGGACAGTTGCTGTGCTTGATCCAATTGTTCAGGGATATGGTGTGATCTTTTCCAGTGGGGAACGTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS-3UTR CAA 90 bp | CTCAGAACAAGCCATGGCCTCCAGAAGTCTCTCTGTCCAGACATCAAGAAAGGTAGAGAAAGCCTCAGCTaGGTTCACCAGAGCTTCCCT | + |
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Preference number: 5 (lower is better) Translates to: LRTSHGLQKSLCPDIKKGRESLS*VHQSFP Trigger: AGGGAAGCTCTGGTGAACCAAGCTGAGGCTTTCTCT...ACCTTTCTTGATGTCTGGACAGAGAGACTTCTGGAGGCCATGGCTTGTTCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS TCA 90 bp | TCTGGTACTGTGGGGGTGTTTTGGTTGCACCACTGTTATTGGGAATaGGGTCAATGTTCTCAGGAGCTACAGGGCTGGCCAAAGAGAAGT | + |
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Preference number: 5 (lower is better) Translates to: SGTVGVFWLHHCYWE*GQCSQELQGWPKRS Trigger: ACTTCTCTTTGGCCAGCCCTGTAGCTCCTGAGAACATTGACCTCATTCCCAATAACAGTGGTGCAACCAAAACACCCCCACAGTACCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS-3UTR CAA 90 bp | CACATGGAGTCAGGTCAGTCCATTGACACAGAAGTCAGACTGTGTGTGGCAGGGCTGATCAATCTCCTTTaGGACTTTCTCTGCGACATG | + |
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Preference number: 5 (lower is better) Translates to: HMESGQSIDTEVRLCVAGLINLL*DFLCDM Trigger: CATGTCGCAGAGAAAGTCCAAAAGGAGATTGATCAG...CCCTGCCACACACAGTCTGACTTCTGTGTCAATGGACTGACCTGACTCCATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS-3UTR CAA 90 bp | AGGTTATGGAGAGAGGGACGAGGGACTGATCTTTTAATAGGTCAGGGTTTGGGGCGGAACAGTGTGTCTTaGGTGACTTTGTGTGGTAGA | + |
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Preference number: 5 (lower is better) Translates to: RLWREGRGTDLLIGQGLGRNSVS*VTLCGR Trigger: TCTACCACACAAAGTCACCAAAGACACACTGTTCCG...CCCCAAACCCTGACCTATTAAAAGATCAGTCCCTCGTCCCTCTCTCCATAACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS-3UTR CAA 90 bp | AGGAGGTCGAGGCAGATGGGTTTTAGTGAGCTCAAGACCAACCAGGTCTACATAATTTCCTGCAGGTTTTaGGAGATTTGTCTGTGGGCA | + |
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Preference number: 5 (lower is better) Translates to: RRSRQMGFSELKTNQVYIISCRF*EICLWA Trigger: TGCCCACAGACAAATCTCCAAAAACCTGCAGGAAAT...TATGTAGACCTGGTTGGTCTTGAGCTCACTAAAACCCATCTGCCTCGACCTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS-3UTR CAA 90 bp | AGGTTATGGAGAGAGGGACGAGGGACTGATCTTTTAATAGGTCAGGGTTTGGGGAAAAGGAACAATTCATaGCGGGCAATGCCTTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: RLWREGRGTDLLIGQGLGKRNNS*RAMPSP Trigger: TGGAGAAGGCATTGCCCGCAATGAATTGTTCCTTTT...CCCCAAACCCTGACCTATTAAAAGATCAGTCCCTCGTCCCTCTCTCCATAACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS-3UTR CAA 90 bp | TCACTGGGTTTTCCCATTCCATTCACAAGGGACGGAAATGGGGACACATGCGAAGTTGCACCACTGTTATaGGGAATGAGGTCAATGTTC | + |
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Preference number: 5 (lower is better) Translates to: SLGFPIPFTRDGNGDTCEVAPLL*GMRSMF Trigger: GAACATTGACCTCATTCCCAATAACAGTGGTGCAAC...TTCGCATGTGTCCCCATTTCCGTCCCTTGTGAATGGAATGGGAAAACCCAGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS-3UTR CAA 90 bp | ACAGCTGACAAAAGATCACATTGTTGCTTTTTCTACAAGACACATGGAGTCAGGAACTCTGTATGGTGGTaGGACTTCTCCTTCTCCATG | + |
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Preference number: 5 (lower is better) Translates to: TADKRSHCCFFYKTHGVRNSVWW*DFSFSM Trigger: CATGGAGAAGGAGAAGTCCAACCACCATACAGAGTT...CCTGACTCCATGTGTCTTGTAGAAAAAGCAACAATGTGATCTTTTGTCAGCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS CCA 72 bp | CTCCATGCGCAGAAGGTAGGTATCAATGAAGTCTCGTaGAGCACTGGGGTCCAAGGTGGCCCTGTGCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: LHAQKVGINEVS*STGVQGGPVLL Trigger: GAGAAGCACAGGGCCACCTTGGACCCCAGTGCTCCACGAGACTTCATTGATACCTACCTTCTGCGCATGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS TCA 72 bp | ACTTCTCCTTCTCCATGCGCAGAAGGTAGGTATCAATaGAGTCTCGTGGAGCACTGGGGTCCAAGGTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: TSPSPCAEGRYQ*SLVEHWGPRWP Trigger: GGGCCACCTTGGACCCCAGTGCTCCACGAGACTTCATTGATACCTACCTTCTGCGCATGGAGAAGGAGAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS GCA 72 bp | TGTATGAAAGAGCTCAGAAGGCCCCGTCTGTCCATCTaGAAGAGGTTACCCAAGAAGGGCAGGGGACGAGGT | + |
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Preference number: 6 (lower is better) Translates to: CMKELRRPRLSI*KRLPKKGRGRG Trigger: ACCTCGTCCCCTGCCCTTCTTGGGTAACCTCTTGCAGATGGACAGACGGGGCCTTCTGAGCTCTTTCATACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS TCA 72 bp | CGAGGTCCTGGTGGGAAGTGGCCATGGGTCTTTGGCTaGCTTTGGCTGACTAAGAATATCAAGAAGCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: RGPGGKWPWVFG*LWLTKNIKKPV Trigger: CACAGGCTTCTTGATATTCTTAGTCAGCCAAAGTCAGCCAAAGACCCATGGCCACTTCCCACCAGGACCTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS CAA 90 bp | TCCAACGTTCCCCACTGGAAAAGATCACACCATATCCCTGAACAATaGGATCAAGCACAGCAACTGTCCCTCGGCCAGAGAAAGCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: SNVPHWKRSHHIPEQ*DQAQQLSLGQRKPQ Trigger: CTGAGGCTTTCTCTGGCCGAGGGACAGTTGCTGTGCTTGATCCAATTGTTCAGGGATATGGTGTGATCTTTTCCAGTGGGGAACGTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS CAA 72 bp | CCCCACTGGAAAAGATCACACCATATCCCTGAACAATaGGATCAAGCACAGCAACTGTCCCTCGGCCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: PHWKRSHHIPEQ*DQAQQLSLGQR Trigger: TCTCTGGCCGAGGGACAGTTGCTGTGCTTGATCCAATTGTTCAGGGATATGGTGTGATCTTTTCCAGTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS TCA 72 bp | CAACGTTCCCCACTGGAAAAGATCACACCATATCCCTaGACAATTGGATCAAGCACAGCAACTGTCCCTCGG | + |
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Preference number: 6 (lower is better) Translates to: QRSPLEKITPYP*TIGSSTATVPR Trigger: CCGAGGGACAGTTGCTGTGCTTGATCCAATTGTTCAGGGATATGGTGTGATCTTTTCCAGTGGGGAACGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS CCA 72 bp | CCCACTGGAAAAGATCACACCATATCCCTGAACAATTaGATCAAGCACAGCAACTGTCCCTCGGCCAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: PTGKDHTISLNN*IKHSNCPSARE Trigger: TTCTCTGGCCGAGGGACAGTTGCTGTGCTTGATCCAATTGTTCAGGGATATGGTGTGATCTTTTCCAGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS TCA 72 bp | AAGAACAGAGAGAGCACAGAGATCACGAGGTTCTGGTaGTGGAACTCTGTATGGTGGTTGGACTTCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: KNRESTEITRFW*WNSVWWLDFSF Trigger: GAAGGAGAAGTCCAACCACCATACAGAGTTCCATCACCAGAACCTCGTGATCTCTGTGCTCTCTCTGTTCTT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS CAA 72 bp | TTCTTGGGGATCAGGTATCCTCGGAACAGTGTGTCTTaGGTGACTTTGTGTGGTAGACCAATCGGAGCAAGA | + |
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Preference number: 6 (lower is better) Translates to: FLGIRYPRNSVS*VTLCGRPIGAR Trigger: TCTTGCTCCGATTGGTCTACCACACAAAGTCACCAAAGACACACTGTTCCGAGGATACCTGATCCCCAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS CAA 90 bp | ACCTCAGTGTTCTTGGGGATCAGGTATCCTCGGAACAGTGTGTCTTaGGTGACTTTGTGTGGTAGACCAATCGGAGCAAGATCTGTAAAT | + |
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Preference number: 6 (lower is better) Translates to: TSVFLGIRYPRNSVS*VTLCGRPIGARSVN Trigger: ATTTACAGATCTTGCTCCGATTGGTCTACCACACAAAGTCACCAAAGACACACTGTTCCGAGGATACCTGATCCCCAAGAACACTGAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS TCA 72 bp | GATGGCAGAGAAGAGCTCAAACACCTGGCTGGACAATaGGCTCATGAGGGAAAATGTCTGGTAGATCAGATT | + |
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Preference number: 6 (lower is better) Translates to: DGREELKHLAGQ*AHEGKCLVDQI Trigger: AATCTGATCTACCAGACATTTTCCCTCATGAGCTCATTGTCCAGCCAGGTGTTTGAGCTCTTCTCTGCCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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| CDS GCA 72 bp | CAAGAAGTGAATCTGGTACTGTGGGGGTGTTTTGGTTaGACCACTGTTATTGGGAATGAGGTCAATGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: QEVNLVLWGCFG*TTVIGNEVNVL Trigger: GAGAACATTGACCTCATTCCCAATAACAGTGGTGCAACCAAAACACCCCCACAGTACCAGATTCACTTCTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077855.8 |
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