Pregenerated sensors for CYP2B13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040583Ensembl transcript IDs: ENSMUST00000005669.9
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAACACACCTTCCAGCTGTGGAGAACCACAATAGGAGGAAAGATGTaGGCAGCAACATACAGTCTAGTTTCCAGCAGCTCTCTCAGAGGC | + |
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Preference number: 1 (lower is better) Translates to: EHTFQLWRTTIGGKM*AATYSLVSSSSLRG Trigger: GCCTCTGAGAGAGCTGCTGGAAACTAGACTGTATGTTGCTGCTCACATCTTTCCTCCTATTGTGGTTCTCCACAGCTGGAAGGTGTGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| 3UTR GCA 90 bp | GTCTCTGTTCACAAATCAAGTATGATAGTTGATTGTTTTCTCCAGTaGCATTCACAGGGAAGAACACACCTTCCAGCTGTGGAGAACCAC | + |
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Preference number: 1 (lower is better) Translates to: VSVHKSSMIVDCFLQ*HSQGRTHLPAVENH Trigger: GTGGTTCTCCACAGCTGGAAGGTGTGTTCTTCCCTGTGAATGGCACTGGAGAAAACAATCAACTATCATACTTGATTTGTGAACAGAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| 3UTR CCA 90 bp | GAGTGTGAAGTTGGGAGGAAGAGGGAAGTGACTCAGCATGAGATGTaGACTCCAGAAGTCTCTGTTCACAAATCAAGTATGATAGTTGAT | + |
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Preference number: 1 (lower is better) Translates to: ECEVGRKREVTQHEM*TPEVSVHKSSMIVD Trigger: ATCAACTATCATACTTGATTTGTGAACAGAGACTTCTGGAGTCCACATCTCATGCTGAGTCACTTCCCTCTTCCTCCCAACTTCACACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| 3UTR TCA 72 bp | TTCCAGCTGTGGAGAACCACAATAGGAGGAAAGATGTaGGCAGCAACATACAGTCTAGTTTCCAGCAGCTCT | + |
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Preference number: 3 (lower is better) Translates to: FQLWRTTIGGKM*AATYSLVSSSS Trigger: AGAGCTGCTGGAAACTAGACTGTATGTTGCTGCTCACATCTTTCCTCCTATTGTGGTTCTCCACAGCTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| 3UTR CCA 72 bp | GTTGGGAGGAAGAGGGAAGTGACTCAGCATGAGATGTaGACTCCAGAAGTCTCTGTTCACAAATCAAGTATG | + |
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Preference number: 3 (lower is better) Translates to: VGRKREVTQHEM*TPEVSVHKSSM Trigger: CATACTTGATTTGTGAACAGAGACTTCTGGAGTCCACATCTCATGCTGAGTCACTTCCCTCTTCCTCCCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| 3UTR TCA 72 bp | TCCAGAAGTCTCTGTTCACAAATCAAGTATGATAGTTaGTTGTTTTCTCCAGTGCCATTCACAGGGAAGAAC | + |
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Preference number: 3 (lower is better) Translates to: SRSLCSQIKYDS*LFSPVPFTGKN Trigger: GTTCTTCCCTGTGAATGGCACTGGAGAAAACAATCAACTATCATACTTGATTTGTGAACAGAGACTTCTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| CDS-3UTR GCA 90 bp | GCCATTCACAGGGAAGAACACACCTTCCAGCTGTGGAGAACCACAATAGGAGGATCCAAGGTTGCCCTGTaGTTTTCCACACGATGGGTA | + |
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Preference number: 4 (lower is better) Translates to: AIHREEHTFQLWRTTIGGSKVAL*FSTRWV Trigger: TACCCATCGTGTGGAAAAGCACAGGGCAACCTTGGA...TCCTCCTATTGTGGTTCTCCACAGCTGGAAGGTGTGTTCTTCCCTGTGAATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| CDS-3UTR CCA 90 bp | GTACAGGGCCCATTAGCACAGACCACAGAGTGTGAAGTTGGGAGGAAGAGGGAAGGAACATGGTATCTTTaGTCACTCTGTGTGGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: VQGPLAQTTECEVGRKREGTWYL*SLCVVL Trigger: GAGCACCACACAGAGTGACCAAAGATACCATGTTCC...TTCCCTCTTCCTCCCAACTTCACACTCTGTGGTCTGTGCTAATGGGCCCTGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| CDS-3UTR CCA 90 bp | GTACAGGGCCCATTAGCACAGACCACAGAGTGTGAAGTTGGGAGGAAGAGGGAAGCCACAGAGAAGTTCTaGAGGATGGACGTGAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: VQGPLAQTTECEVGRKREATEKF*RMDVKK Trigger: TTTCTTCACGTCCATCCTCCAGAACTTCTCTGTGGC...TTCCCTCTTCCTCCCAACTTCACACTCTGTGGTCTGTGCTAATGGGCCCTGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| CDS-3UTR CCA 90 bp | GATGTGAGCAGCAACATACAGTCTAGTTTCCAGCAGCTCTCTCAGAGGCACAAAAGGACGGGGTCCTGGTaGAAGATGACCATGGATCTT | + |
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Preference number: 4 (lower is better) Translates to: DVSSNIQSSFQQLSQRHKRTGSW*KMTMDL Trigger: AAGATCCATGGTCATCTTCCACCAGGACCCCGTCCT...TTTGTGCCTCTGAGAGAGCTGCTGGAAACTAGACTGTATGTTGCTGCTCACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| CDS-3UTR TCA 90 bp | GCAGCAACATACAGTCTAGTTTCCAGCAGCTCTCTCAGAGGCACAAAAATAGAGGGTCCTGGTGGAAGATaGCCATGGATCTTTGCATGG | + |
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Preference number: 4 (lower is better) Translates to: AATYSLVSSSSLRGTKIEGPGGR*PWIFAW Trigger: CCATGCAAAGATCCATGGTCATCTTCCACCAGGACC...CTCTATTTTTGTGCCTCTGAGAGAGCTGCTGGAAACTAGACTGTATGTTGCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| CDS-3UTR TCA 90 bp | GATGTGAGCAGCAACATACAGTCTAGTTTCCAGCAGCTCTCTCAGAGGCACAAAATCATGAGGTTCTGGTaGTGGAACTCCGTGTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: DVSSNIQSSFQQLSQRHKIMRFW*WNSVLW Trigger: CCACAACACGGAGTTCCATCACCAGAACCTCATGAT...TTTGTGCCTCTGAGAGAGCTGCTGGAAACTAGACTGTATGTTGCTGCTCACATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| CDS-3UTR GCA 90 bp | CCAGCTGTGGAGAACCACAATAGGAGGAAAGATGTGAGCAGCAACATACAGTCTGGTCACTCTGTGTGGTaGTCCAGTAGGGACAATATC | + |
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Preference number: 4 (lower is better) Translates to: PAVENHNRRKDVSSNIQSGHSVW*SSRDNI Trigger: GATATTGTCCCTACTGGAGCACCACACAGAGTGACC...AGACTGTATGTTGCTGCTCACATCTTTCCTCCTATTGTGGTTCTCCACAGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| CDS-3UTR CCA 90 bp | GCCATTCACAGGGAAGAACACACCTTCCAGCTGTGGAGAACCACAATAGGAGGACAGTGTATGGCATTTTaGTGCGATCATCAAGGGTTG | + |
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Preference number: 4 (lower is better) Translates to: AIHREEHTFQLWRTTIGGQCMAF*CDHQGL Trigger: CAACCCTTGATGATCGCACCAAAATGCCATACACTG...TCCTCCTATTGTGGTTCTCCACAGCTGGAAGGTGTGTTCTTCCCTGTGAATGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| CDS-3UTR CCA 90 bp | GTACAGGGCCCATTAGCACAGACCACAGAGTGTGAAGTTGGGAGGAAGAGGGAAAAATGCGCTTTCCTGTaGAGAAGGGTAGAAAAGCTT | + |
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Preference number: 4 (lower is better) Translates to: VQGPLAQTTECEVGRKREKCAFL*RRVEKL Trigger: AAGCTTTTCTACCCTTCTCCACAGGAAAGCGCATTT...TTCCCTCTTCCTCCCAACTTCACACTCTGTGGTCTGTGCTAATGGGCCCTGTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| CDS-3UTR CCA 90 bp | GTACAGGGCCCATTAGCACAGACCACAGAGTGTGAAGTTGGGAGGAAGAGGGAAGCAGATCTGGTACGTTaGAGGTATTTTTCCAATACC | + |
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Preference number: 4 (lower is better) Translates to: VQGPLAQTTECEVGRKREADLVR*RYFSNT Trigger: GGTATTGGAAAAATACCTCCAACGTACCAGATCTGC...TTCCCTCTTCCTCCCAACTTCACACTCTGTGGTCTGTGCTAATGGGCCCTGTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| CDS-3UTR CCA 90 bp | GATGTGAGCAGCAACATACAGTCTAGTTTCCAGCAGCTCTCTCAGAGGCACAAAACTTTCTCTGCAACATaGGGGTACATGAGCATGAGC | + |
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Preference number: 4 (lower is better) Translates to: DVSSNIQSSFQQLSQRHKTFSAT*GYMSMS Trigger: GCTCATGCTCATGTACCCCCATGTTGCAGAGAAAGT...TTTGTGCCTCTGAGAGAGCTGCTGGAAACTAGACTGTATGTTGCTGCTCACATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| CDS-3UTR CCA 90 bp | AAGAGGGAAGTGACTCAGCATGAGATGTGGACTCCAGAAGTCTCTGTTCACAAATGGAACTCCGTGTTGTaGTTTGACTTCTCCTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: KREVTQHEMWTPEVSVHKWNSVL*FDFSFS Trigger: GGAGAAGGAGAAGTCAAACCACAACACGGAGTTCCA...TTTGTGAACAGAGACTTCTGGAGTCCACATCTCATGCTGAGTCACTTCCCTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| CDS-3UTR GCA 90 bp | AGGGAAGTGACTCAGCATGAGATGTGGACTCCAGAAGTCTCTGTTCACAAATCACTTTTGGACTTTCTCTaGAACATGGGGGTACATGAG | + |
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Preference number: 4 (lower is better) Translates to: REVTQHEMWTPEVSVHKSLLDFL*NMGVHE Trigger: CTCATGTACCCCCATGTTGCAGAGAAAGTCCAAAAG...TGATTTGTGAACAGAGACTTCTGGAGTCCACATCTCATGCTGAGTCACTTCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| CDS-3UTR GCA 90 bp | AGGGAAGTGACTCAGCATGAGATGTGGACTCCAGAAGTCTCTGTTCACAAATCATGTATGGCATTTTGGTaGGATCATCAAGGGTTGGTA | + |
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Preference number: 4 (lower is better) Translates to: REVTQHEMWTPEVSVHKSCMAFW*DHQGLV Trigger: TACCAACCCTTGATGATCGCACCAAAATGCCATACA...TGATTTGTGAACAGAGACTTCTGGAGTCCACATCTCATGCTGAGTCACTTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| CDS-3UTR CCA 90 bp | AGGGAAGTGACTCAGCATGAGATGTGGACTCCAGAAGTCTCTGTTCACAAATCAAAGAGCTCAAACATCTaGCAGGAGAATGACCTTAAG | + |
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Preference number: 4 (lower is better) Translates to: REVTQHEMWTPEVSVHKSKSSNI*QENDLK Trigger: CTTAAGGTCATTCTCCTGCCAGATGTTTGAGCTCTT...TGATTTGTGAACAGAGACTTCTGGAGTCCACATCTCATGCTGAGTCACTTCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| CDS-3UTR CCA 90 bp | GCAGCAACATACAGTCTAGTTTCCAGCAGCTCTCTCAGAGGCACAAAAATAGAGGCCAAGAAGCAGATCTaGTACGTTGGAGGTATTTTT | + |
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Preference number: 4 (lower is better) Translates to: AATYSLVSSSSLRGTKIEAKKQI*YVGGIF Trigger: AAAAATACCTCCAACGTACCAGATCTGCTTCTTGGC...CTCTATTTTTGTGCCTCTGAGAGAGCTGCTGGAAACTAGACTGTATGTTGCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| CDS-3UTR CCA 90 bp | GCAGCAACATACAGTCTAGTTTCCAGCAGCTCTCTCAGAGGCACAAAAATAGAGAGGATTGAAACTGTCTaGTTGTTCAAAGTACTGTGG | + |
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Preference number: 4 (lower is better) Translates to: AATYSLVSSSSLRGTKIERIETV*LFKVLW Trigger: CCACAGTACTTTGAACAACCAGACAGTTTCAATCCT...CTCTATTTTTGTGCCTCTGAGAGAGCTGCTGGAAACTAGACTGTATGTTGCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| CDS-3UTR TCA 90 bp | AGGGAAGTGACTCAGCATGAGATGTGGACTCCAGAAGTCTCTGTTCACAAATCAAGTAGGGACAATATCTaGAAATCTCTGAATTTCGTG | + |
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Preference number: 4 (lower is better) Translates to: REVTQHEMWTPEVSVHKSSRDNI*KSLNFV Trigger: CACGAAATTCAGAGATTTTCAGATATTGTCCCTACT...TGATTTGTGAACAGAGACTTCTGGAGTCCACATCTCATGCTGAGTCACTTCCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| CDS CCA 90 bp | CTTCTCCTTCTCCATCCTCAGCAGATAGGTATCGATGAAGTCTCGTaGCTCACTGGGGTCCAAGGTTGCCCTGTGCTTTTCCACACGATG | + |
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Preference number: 5 (lower is better) Translates to: LLLLHPQQIGIDEVS*LTGVQGCPVLFHTM Trigger: CATCGTGTGGAAAAGCACAGGGCAACCTTGGACCCCAGTGAGCCACGAGACTTCATCGATACCTATCTGCTGAGGATGGAGAAGGAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| CDS CCA 90 bp | GGTCATGGAGAGCTGAACTCAGGATGGGGTACACCTCAGTGTTCTTaGGGAGCAGGTACCCTCGGAACATGGTATCTTTGGTCACTCTGT | + |
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Preference number: 5 (lower is better) Translates to: GHGELNSGWGTPQCS*GAGTLGTWYLWSLC Trigger: ACAGAGTGACCAAAGATACCATGTTCCGAGGGTACCTGCTCCCCAAGAACACTGAGGTGTACCCCATCCTGAGTTCAGCTCTCCATGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| CDS CCA 90 bp | CTGGTTGTTCAAAGTACTGTGGGTCATGGAGAGCTGAACTCAGGATaGGGTACACCTCAGTGTTCTTGGGGAGCAGGTACCCTCGGAACA | + |
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Preference number: 5 (lower is better) Translates to: LVVQSTVGHGELNSG*GTPQCSWGAGTLGT Trigger: TGTTCCGAGGGTACCTGCTCCCCAAGAACACTGAGGTGTACCCCATCCTGAGTTCAGCTCTCCATGACCCACAGTACTTTGAACAACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| CDS TCA 90 bp | TGTGGTTTGACTTCTCCTTCTCCATCCTCAGCAGATAGGTATCGATaGAGTCTCGTGGCTCACTGGGGTCCAAGGTTGCCCTGTGCTTTT | + |
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Preference number: 5 (lower is better) Translates to: CGLTSPSPSSADRYR*SLVAHWGPRLPCAF Trigger: AAAAGCACAGGGCAACCTTGGACCCCAGTGAGCCACGAGACTTCATCGATACCTATCTGCTGAGGATGGAGAAGGAGAAGTCAAACCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| CDS-3UTR CAA 90 bp | AGGGAAGTGACTCAGCATGAGATGTGGACTCCAGAAGTCTCTGTTCACAAATCACACTGGGGTCCAAGGTaGCCCTGTGCTTTTCCACAC | + |
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Preference number: 5 (lower is better) Translates to: REVTQHEMWTPEVSVHKSHWGPR*PCAFPH Trigger: GTGTGGAAAAGCACAGGGCAACCTTGGACCCCAGTG...TGATTTGTGAACAGAGACTTCTGGAGTCCACATCTCATGCTGAGTCACTTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| CDS-3UTR CAA 90 bp | AAAGATGTGAGCAGCAACATACAGTCTAGTTTCCAGCAGCTCTCTCAGAGGCACCCAATACCACTCTCCTaGGGAGTGAGGTCAATGTCC | + |
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Preference number: 5 (lower is better) Translates to: KDVSSNIQSSFQQLSQRHPIPLS*GVRSMS Trigger: GGACATTGACCTCACTCCCAAGGAGAGTGGTATTGG...GTGCCTCTGAGAGAGCTGCTGGAAACTAGACTGTATGTTGCTGCTCACATCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| CDS TCA 90 bp | ATTGAAACTGTCTGGTTGTTCAAAGTACTGTGGGTCATGGAGAGCTaGACTCAGGATGGGGTACACCTCAGTGTTCTTGGGGAGCAGGTA | + |
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Preference number: 5 (lower is better) Translates to: IETVWLFKVLWVMES*TQDGVHLSVLGEQV Trigger: TACCTGCTCCCCAAGAACACTGAGGTGTACCCCATCCTGAGTTCAGCTCTCCATGACCCACAGTACTTTGAACAACCAGACAGTTTCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| CDS-3UTR CAA 90 bp | GCCATTCACAGGGAAGAACACACCTTCCAGCTGTGGAGAACCACAATAGGAGGAATGGAGCAGATGATATaGGCTGTAACACACTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: AIHREEHTFQLWRTTIGGMEQMI*AVTHWK Trigger: CTTCCAGTGTGTTACAGCCAATATCATCTGCTCCAT...TCCTCCTATTGTGGTTCTCCACAGCTGGAAGGTGTGTTCTTCCCTGTGAATGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| CDS-3UTR CAA 90 bp | GCAACATACAGTCTAGTTTCCAGCAGCTCTCTCAGAGGCACAAAAATAGAGCCACGGAACATGGTATCTTaGGTCACTCTGTGTGGTGCT | + |
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Preference number: 5 (lower is better) Translates to: ATYSLVSSSSLRGTKIEPRNMVS*VTLCGA Trigger: AGCACCACACAGAGTGACCAAAGATACCATGTTCCG...TGGCTCTATTTTTGTGCCTCTGAGAGAGCTGCTGGAAACTAGACTGTATGTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| CDS-3UTR CAA 90 bp | CCAGCTGTGGAGAACCACAATAGGAGGAAAGATGTGAGCAGCAACATACAGTCTCGATGGGTAATGAAGTaGAGGATTTCCTGCTGGTTT | + |
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Preference number: 5 (lower is better) Translates to: PAVENHNRRKDVSSNIQSRWVMK*RISCWF Trigger: AAACCAGCAGGAAATCCTCAACTTCATTACCCATCG...AGACTGTATGTTGCTGCTCACATCTTTCCTCCTATTGTGGTTCTCCACAGCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| CDS-3UTR CAA 90 bp | GCAGCAACATACAGTCTAGTTTCCAGCAGCTCTCTCAGAGGCACAAAAATAGAGAAAAGGAACAATTCGTaGCGGGCAATGCTTTCACCA | + |
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Preference number: 5 (lower is better) Translates to: AATYSLVSSSSLRGTKIEKRNNS*RAMLSP Trigger: TGGTGAAAGCATTGCCCGCAACGAATTGTTCCTTTT...CTCTATTTTTGTGCCTCTGAGAGAGCTGCTGGAAACTAGACTGTATGTTGCTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| CDS-3UTR CAA 90 bp | AAAGATGTGAGCAGCAACATACAGTCTAGTTTCCAGCAGCTCTCTCAGAGGCACAGCAGATCTGGTACGTaGGAGGTATTTTTCCAATAC | + |
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Preference number: 5 (lower is better) Translates to: KDVSSNIQSSFQQLSQRHSRSGT*EVFFQY Trigger: GTATTGGAAAAATACCTCCAACGTACCAGATCTGCT...GTGCCTCTGAGAGAGCTGCTGGAAACTAGACTGTATGTTGCTGCTCACATCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| CDS-3UTR CAA 90 bp | AAGAGGGAAGTGACTCAGCATGAGATGTGGACTCCAGAAGTCTCTGTTCACAAACTGATCAATCTCCTTTaGGACTTTCTCTGCAACATG | + |
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Preference number: 5 (lower is better) Translates to: KREVTQHEMWTPEVSVHKLINLL*DFLCNM Trigger: CATGTTGCAGAGAAAGTCCAAAAGGAGATTGATCAG...TTTGTGAACAGAGACTTCTGGAGTCCACATCTCATGCTGAGTCACTTCCCTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| CDS-3UTR CAA 90 bp | AAGAGGGAAGTGACTCAGCATGAGATGTGGACTCCAGAAGTCTCTGTTCACAAAATTGAAACTGTCTGGTaGTTCAAAGTACTGTGGGTC | + |
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Preference number: 5 (lower is better) Translates to: KREVTQHEMWTPEVSVHKIETVW*FKVLWV Trigger: GACCCACAGTACTTTGAACAACCAGACAGTTTCAAT...TTTGTGAACAGAGACTTCTGGAGTCCACATCTCATGCTGAGTCACTTCCCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| CDS CAA 90 bp | GGGTCATGGAGAGCTGAACTCAGGATGGGGTACACCTCAGTGTTCTaGGGGAGCAGGTACCCTCGGAACATGGTATCTTTGGTCACTCTG | + |
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Preference number: 6 (lower is better) Translates to: GSWRAELRMGYTSVF*GSRYPRNMVSLVTL Trigger: CAGAGTGACCAAAGATACCATGTTCCGAGGGTACCTGCTCCCCAAGAACACTGAGGTGTACCCCATCCTGAGTTCAGCTCTCCATGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| CDS TCA 72 bp | ACTTCTCCTTCTCCATCCTCAGCAGATAGGTATCGATaGAGTCTCGTGGCTCACTGGGGTCCAAGGTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: TSPSPSSADRYR*SLVAHWGPRLP Trigger: GGGCAACCTTGGACCCCAGTGAGCCACGAGACTTCATCGATACCTATCTGCTGAGGATGGAGAAGGAGAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| CDS CCA 72 bp | CAAAGTACTGTGGGTCATGGAGAGCTGAACTCAGGATaGGGTACACCTCAGTGTTCTTGGGGAGCAGGTACC | + |
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Preference number: 6 (lower is better) Translates to: QSTVGHGELNSG*GTPQCSWGAGT Trigger: GGTACCTGCTCCCCAAGAACACTGAGGTGTACCCCATCCTGAGTTCAGCTCTCCATGACCCACAGTACTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| CDS GCA 72 bp | AAGTCTCGTGGCTCACTGGGGTCCAAGGTTGCCCTGTaGTTTTCCACACGATGGGTAATGAAGTTGAGGATT | + |
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Preference number: 6 (lower is better) Translates to: KSRGSLGSKVAL*FSTRWVMKLRI Trigger: AATCCTCAACTTCATTACCCATCGTGTGGAAAAGCACAGGGCAACCTTGGACCCCAGTGAGCCACGAGACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| CDS CAA 90 bp | ACCTCAGTGTTCTTGGGGAGCAGGTACCCTCGGAACATGGTATCTTaGGTCACTCTGTGTGGTGCTCCAGTAGGGACAATATCTGAAAAT | + |
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Preference number: 6 (lower is better) Translates to: TSVFLGSRYPRNMVS*VTLCGAPVGTISEN Trigger: ATTTTCAGATATTGTCCCTACTGGAGCACCACACAGAGTGACCAAAGATACCATGTTCCGAGGGTACCTGCTCCCCAAGAACACTGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| CDS CAA 90 bp | AAGCAGATCTGGTACGTTGGAGGTATTTTTCCAATACCACTCTCCTaGGGAGTGAGGTCAATGTCCTTAGAAGCAACAGGGCTTGCCACA | + |
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Preference number: 6 (lower is better) Translates to: KQIWYVGGIFPIPLS*GVRSMSLEATGLAT Trigger: TGTGGCAAGCCCTGTTGCTTCTAAGGACATTGACCTCACTCCCAAGGAGAGTGGTATTGGAAAAATACCTCCAACGTACCAGATCTGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| CDS CAA 72 bp | TGGTACGTTGGAGGTATTTTTCCAATACCACTCTCCTaGGGAGTGAGGTCAATGTCCTTAGAAGCAACAGGG | + |
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Preference number: 6 (lower is better) Translates to: WYVGGIFPIPLS*GVRSMSLEATG Trigger: CCCTGTTGCTTCTAAGGACATTGACCTCACTCCCAAGGAGAGTGGTATTGGAAAAATACCTCCAACGTACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| CDS CAA 72 bp | GTTGCCCTGTGCTTTTCCACACGATGGGTAATGAAGTaGAGGATTTCCTGCTGGTTTTTAGCAATTTGTCTG | + |
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Preference number: 6 (lower is better) Translates to: VALCFSTRWVMK*RISCWFLAICL Trigger: CAGACAAATTGCTAAAAACCAGCAGGAAATCCTCAACTTCATTACCCATCGTGTGGAAAAGCACAGGGCAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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| CDS TCA 72 bp | ATCTGGCAGGAGAATGACCTTAAGAGTGAATATATCTaGTACATCAGATTCAGCAAACGCAGGAACTGTTCA | + |
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Preference number: 6 (lower is better) Translates to: IWQENDLKSEYI*YIRFSKRRNCS Trigger: TGAACAGTTCCTGCGTTTGCTGAATCTGATGTATCAGATATATTCACTCTTAAGGTCATTCTCCTGCCAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005669.9 |
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