Pregenerated sensors for CYP2AB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022818Ensembl transcript IDs: ENSMUST00000023513.12, ENSMUST00000182508.9, ENSMUST00000182741.2
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACGCTGCACTGGCTTCCCTGTCACACAGTAAGAGTCTTTAGCCACTaGTTTATCTTTCCAGCCTCCACTTGTGAATTTTCTAATAGTCAG | + |
|
Preference number: 1 (lower is better) Translates to: TLHWLPCHTVRVFSH*FIFPASTCEFSNSQ Trigger: CTGACTATTAGAAAATTCACAAGTGGAGGCTGGAAAGATAAATCAGTGGCTAAAGACTCTTACTGTGTGACAGGGAAGCCAGTGCAGCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| 3UTR CCA 90 bp | AAATGTTATGGCAACAGTTATCGAGATTTAGACACTTCTTCCTTCTaGTCTGAAGATGGCAGGGAGAGAACAGAAAATGGTGTGCACCTT | + |
|
Preference number: 1 (lower is better) Translates to: KCYGNSYRDLDTSSF*SEDGRERTENGVHL Trigger: AAGGTGCACACCATTTTCTGTTCTCTCCCTGCCATCTTCAGACCAGAAGGAAGAAGTGTCTAAATCTCGATAACTGTTGCCATAACATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| 3UTR-3UTR TCA 90 bp | AGCAGTCACCAGTGGTGTGTGAAAGCTCTTGGTTCTGTGCAACCAGTTCTTAGGCCATCAGAGCTAGTGTaGGAACTGGGGCAGCTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: SSHQWCVKALGSVQPVLRPSELV*ELGQLS Trigger: GCTCAGCTGCCCCAGTTCTCACACTAGCTCTGATGG...CCTAAGAACTGGTTGCACAGAACCAAGAGCTTTCACACACCACTGGTGACTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| 3UTR-3UTR GCA 90 bp | AGCAGTCACCAGTGGTGTGTGAAAGCTCTTGGTTCTGTGCAACCAGTTCTTAGGGAACAGAAAATGGTGTaGACCTTCTCCCACCCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: SSHQWCVKALGSVQPVLREQKMV*TFSHPH Trigger: GTGAGGGTGGGAGAAGGTGCACACCATTTTCTGTTC...CCTAAGAACTGGTTGCACAGAACCAAGAGCTTTCACACACCACTGGTGACTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| 3UTR-3UTR CCA 90 bp | AGCAGTCACCAGTGGTGTGTGAAAGCTCTTGGTTCTGTGCAACCAGTTCTTAGGGACACTTCTTCCTTCTaGTCTGAAGATGGCAGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: SSHQWCVKALGSVQPVLRDTSSF*SEDGRE Trigger: CTCCCTGCCATCTTCAGACCAGAAGGAAGAAGTGTC...CCTAAGAACTGGTTGCACAGAACCAAGAGCTTTCACACACCACTGGTGACTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| 3UTR-3UTR TCA 90 bp | TCTAGCAGTCACCAGTGGTGTGTGAAAGCTCTTGGTTCTGTGCAACCAGTTCTTCCTGATTTTGAGGGCTaGCAGATGGAAACCTCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: SSSHQWCVKALGSVQPVLPDFEG*QMETSC Trigger: ACAGGAGGTTTCCATCTGTCAGCCCTCAAAATCAGG...AAGAACTGGTTGCACAGAACCAAGAGCTTTCACACACCACTGGTGACTGCTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| 3UTR-3UTR TCA 90 bp | AGCAGTCACCAGTGGTGTGTGAAAGCTCTTGGTTCTGTGCAACCAGTTCTTAGGTCGAGCCAGGGTTTTTaGTGGAAAATGTTATGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: SSHQWCVKALGSVQPVLRSSQGF*WKMLWQ Trigger: TTGCCATAACATTTTCCATCAAAAACCCTGGCTCGA...CCTAAGAACTGGTTGCACAGAACCAAGAGCTTTCACACACCACTGGTGACTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| 3UTR-3UTR TCA 90 bp | TCTTTAGCCACTGATTTATCTTTCCAGCCTCCACTTGTGAATTTTCTAATAGTCCCATCAGAGCTAGTGTaGGAACTGGGGCAGCTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: SLATDLSFQPPLVNFLIVPSELV*ELGQLS Trigger: GCTCAGCTGCCCCAGTTCTCACACTAGCTCTGATGG...GACTATTAGAAAATTCACAAGTGGAGGCTGGAAAGATAAATCAGTGGCTAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| 3UTR-3UTR GCA 90 bp | TCTTTAGCCACTGATTTATCTTTCCAGCCTCCACTTGTGAATTTTCTAATAGTCCCAGGGGTGTGTGAATaGTCCAGCAGTCACCAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: SLATDLSFQPPLVNFLIVPGVCE*SSSHQW Trigger: CCACTGGTGACTGCTGGAGCATTCACACACCCCTGG...GACTATTAGAAAATTCACAAGTGGAGGCTGGAAAGATAAATCAGTGGCTAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| 3UTR-3UTR TCA 90 bp | CAGCCTCCACTTGTGAATTTTCTAATAGTCAGCCCTATTCCTAAACCTTATCTTGTCACCAGTGGTGTGTaGAAGCTCTTGGTTCTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: QPPLVNFLIVSPIPKPYLVTSGV*KLLVLC Trigger: GCACAGAACCAAGAGCTTTCACACACCACTGGTGAC...AAGATAAGGTTTAGGAATAGGGCTGACTATTAGAAAATTCACAAGTGGAGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| 3UTR-3UTR GCA 90 bp | CAAAACAAGCAAACCAAGATGGAGAAGACGCTGCACTGGCTTCCCTGTCACACATCCCCAGCATTTGCATaGACTACTGTTTATAGTATT | + |
|
Preference number: 2 (lower is better) Translates to: QNKQTKMEKTLHWLPCHTSPAFA*TTVYSI Trigger: AATACTATAAACAGTAGTGCATGCAAATGCTGGGGA...TGTGTGACAGGGAAGCCAGTGCAGCGTCTTCTCCATCTTGGTTTGCTTGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| 3UTR-3UTR TCA 90 bp | CCAGCATTTGCATGCACTACTGTTTATAGTATTATGGGAAAGCACTTCCCTTTACCTGATTTTGAGGGCTaGCAGATGGAAACCTCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: PAFACTTVYSIMGKHFPLPDFEG*QMETSC Trigger: ACAGGAGGTTTCCATCTGTCAGCCCTCAAAATCAGG...TAAAGGGAAGTGCTTTCCCATAATACTATAAACAGTAGTGCATGCAAATGCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| 3UTR-3UTR CCA 90 bp | GAGTGTCAGAGTTTGATTTTTAGGAATTTAGCAGGTATGTGGTGGCTTCTCATTGGAGAGAACAGAAAATaGTGTGCACCTTCTCCCACC | + |
|
Preference number: 2 (lower is better) Translates to: ECQSLIFRNLAGMWWLLIGENRK*CAPSPT Trigger: GGTGGGAGAAGGTGCACACCATTTTCTGTTCTCTCC...AATGAGAAGCCACCACATACCTGCTAAATTCCTAAAAATCAAACTCTGACACTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| 3UTR-3UTR TCA 90 bp | AATGCTTTCCACCATTTTACCATTTGTGGTGATGATATAGTCACCAGCAAAAGTTTCTTCCTTCTGGTCTaGAGATGGCAGGGAGAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: NAFHHFTICGDDIVTSKSFFLLV*RWQGEN Trigger: GTTCTCTCCCTGCCATCTTCAGACCAGAAGGAAGAA...ACTTTTGCTGGTGACTATATCATCACCACAAATGGTAAAATGGTGGAAAGCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| 3UTR-3UTR GCA 90 bp | AATGCTTTCCACCATTTTACCATTTGTGGTGATGATATAGTCACCAGCAAAAGTGAACAGAAAATGGTGTaGACCTTCTCCCACCCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: NAFHHFTICGDDIVTSKSEQKMV*TFSHPH Trigger: GTGAGGGTGGGAGAAGGTGCACACCATTTTCTGTTC...ACTTTTGCTGGTGACTATATCATCACCACAAATGGTAAAATGGTGGAAAGCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| 3UTR-3UTR GCA 90 bp | TCTTTAGCCACTGATTTATCTTTCCAGCCTCCACTTGTGAATTTTCTAATAGTCAAGCTCTTGGTTCTGTaGAACCAGTTCTTAGGAGTG | + |
|
Preference number: 2 (lower is better) Translates to: SLATDLSFQPPLVNFLIVKLLVL*NQFLGV Trigger: CACTCCTAAGAACTGGTTGCACAGAACCAAGAGCTT...GACTATTAGAAAATTCACAAGTGGAGGCTGGAAAGATAAATCAGTGGCTAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| 3UTR-3UTR GCA 90 bp | CAGCCTCCACTTGTGAATTTTCTAATAGTCAGCCCTATTCCTAAACCTTATCTTTCCCCAGCATTTGCATaGACTACTGTTTATAGTATT | + |
|
Preference number: 2 (lower is better) Translates to: QPPLVNFLIVSPIPKPYLSPAFA*TTVYSI Trigger: AATACTATAAACAGTAGTGCATGCAAATGCTGGGGA...AAGATAAGGTTTAGGAATAGGGCTGACTATTAGAAAATTCACAAGTGGAGGCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| 3UTR CCA 72 bp | TCACCAGTGGTGTGTGAACGCACTAGCAGTCACCAGTaGTGTGAGAACACTCTAGCCATCACCAGTGGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: SPVVCERTSSHQ*CENTLAITSGV Trigger: CACCCCACTGGTGATGGCTAGAGTGTTCTCACACCACTGGTGACTGCTAGTGCGTTCACACACCACTGGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| 3UTR CCA 72 bp | TCACCAGTGGGGTGTGAACGCTCTAGCAGTCACCAGTaGTGTGTGAAAGCTCTTGGTTCTGTGCAACCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: SPVGCERSSSHQ*CVKALGSVQPV Trigger: AACTGGTTGCACAGAACCAAGAGCTTTCACACACCACTGGTGACTGCTAGAGCGTTCACACCCCACTGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| 3UTR TCA 72 bp | GAAATCTACTTCGTCCTAGTTCCTGATTTTGAGGGCTaGCAGATGGAAACCTCCTGTGTCGGGGGACTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: EIYFVLVPDFEG*QMETSCVGGLQ Trigger: CTGCAGTCCCCCGACACAGGAGGTTTCCATCTGTCAGCCCTCAAAATCAGGAACTAGGACGAAGTAGATTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| 3UTR TCA 72 bp | TGGGGTGTGAACGCTCTAGCAGTCACCAGTGGTGTGTaGAAGCTCTTGGTTCTGTGCAACCAGTTCTTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: WGVNALAVTSGV*KLLVLCNQFLG Trigger: TCCTAAGAACTGGTTGCACAGAACCAAGAGCTTTCACACACCACTGGTGACTGCTAGAGCGTTCACACCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| 3UTR CCA 72 bp | CAAAACAAGCAAACCAAGATGGAGAAGACGCTGCACTaGCTTCCCTGTCACACAGTAAGAGTCTTTAGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: QNKQTKMEKTLH*LPCHTVRVFSH Trigger: GTGGCTAAAGACTCTTACTGTGTGACAGGGAAGCCAGTGCAGCGTCTTCTCCATCTTGGTTTGCTTGTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| 3UTR-3UTR CAA 90 bp | CAAAACAAGCAAACCAAGATGGAGAAGACGCTGCACTGGCTTCCCTGTCACACATACTGTTGCAAGATCTaGCTATGTCCATTTTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: QNKQTKMEKTLHWLPCHTYCCKI*LCPFSR Trigger: CCTGGAAAATGGACATAGCAAGATCTTGCAACAGTA...TGTGTGACAGGGAAGCCAGTGCAGCGTCTTCTCCATCTTGGTTTGCTTGTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTAGCAGTCACCAGTGGTGTGTGAAAGCTCTTGGTTCTGTGCAACCAGTTCTTACCAGTCCCCAGCATTaGCATGCACTACTGTTTATA | + |
|
Preference number: 3 (lower is better) Translates to: SSSHQWCVKALGSVQPVLTSPQH*HALLFI Trigger: TATAAACAGTAGTGCATGCAAATGCTGGGGACTGGT...AAGAACTGGTTGCACAGAACCAAGAGCTTTCACACACCACTGGTGACTGCTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTAGCAGTCACCAGTGGTGTGTGAAAGCTCTTGGTTCTGTGCAACCAGTTCTTTACTGTTGCAAGATCTaGCTATGTCCATTTTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SSSHQWCVKALGSVQPVLYCCKI*LCPFSR Trigger: CCTGGAAAATGGACATAGCAAGATCTTGCAACAGTA...AAGAACTGGTTGCACAGAACCAAGAGCTTTCACACACCACTGGTGACTGCTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| 3UTR CCA 72 bp | GGCAACAGTTATCGAGATTTAGACACTTCTTCCTTCTaGTCTGAAGATGGCAGGGAGAGAACAGAAAATGGT | + |
|
Preference number: 3 (lower is better) Translates to: GNSYRDLDTSSF*SEDGRERTENG Trigger: ACCATTTTCTGTTCTCTCCCTGCCATCTTCAGACCAGAAGGAAGAAGTGTCTAAATCTCGATAACTGTTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| 3UTR TCA 72 bp | TGGCTTCCCTGTCACACAGTAAGAGTCTTTAGCCACTaGTTTATCTTTCCAGCCTCCACTTGTGAATTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: WLPCHTVRVFSH*FIFPASTCEFS Trigger: AGAAAATTCACAAGTGGAGGCTGGAAAGATAAATCAGTGGCTAAAGACTCTTACTGTGTGACAGGGAAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| 3UTR GCA 72 bp | ACTATTCGAACCCAGTTAGTTACTGTTGCAAGATCTTaGTATGTCCATTTTCCAGGATTGCCATCAGAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: TIRTQLVTVARS*YVHFPGLPSEL Trigger: TAGCTCTGATGGCAATCCTGGAAAATGGACATAGCAAGATCTTGCAACAGTAACTAACTGGGTTCGAATAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR TCA 90 bp | CGCACTAGCAGTCACCAGTGGTGTGAGAACACTCTAGCCATCACCAGTGGGGTGCTTCTGATGGGGTCCTaGGAGGTGGCGGAGGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RTSSHQWCENTLAITSGVLLMGS*EVAEGP Trigger: TGGGCCCTCCGCCACCTCTCAGGACCCCATCAGAAG...CACCCCACTGGTGATGGCTAGAGTGTTCTCACACCACTGGTGACTGCTAGTGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR CCA 90 bp | CGCACTAGCAGTCACCAGTGGTGTGAGAACACTCTAGCCATCACCAGTGGGGTGCCCAGTGCAGTGTGGTaGCCGTGGTGTCTGTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RTSSHQWCENTLAITSGVPSAVW*PWCLCL Trigger: GAGGCACAGACACCACGGCCACCACACTGCACTGGG...CACCCCACTGGTGATGGCTAGAGTGTTCTCACACCACTGGTGACTGCTAGTGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR TCA 90 bp | CGCACTAGCAGTCACCAGTGGTGTGAGAACACTCTAGCCATCACCAGTGGGGTGGGAAGTGGCCAGGGTTaGATTGATGAGGGCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RTSSHQWCENTLAITSGVGSGQG*IDEGSP Trigger: GGGAGAGCCCTCATCAATTCAACCCTGGCCACTTCC...CACCCCACTGGTGATGGCTAGAGTGTTCTCACACCACTGGTGACTGCTAGTGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR GCA 90 bp | CGCACTAGCAGTCACCAGTGGTGTGAGAACACTCTAGCCATCACCAGTGGGGTGTATATGAGTGCCCAGTaGAGTGTGGTGGCCGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RTSSHQWCENTLAITSGVYMSAQ*SVVAVV Trigger: CACCACGGCCACCACACTGCACTGGGCACTCATATA...CACCCCACTGGTGATGGCTAGAGTGTTCTCACACCACTGGTGACTGCTAGTGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR GCA 90 bp | CAAAACAAGCAAACCAAGATGGAGAAGACGCTGCACTGGCTTCCCTGTCACACACCAGGACACACCCGATaGCCTGCAGAGAAGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QNKQTKMEKTLHWLPCHTPGHTR*PAEKGR Trigger: CCTGCCCTTCTCTGCAGGGCATCGGGTGTGTCCTGG...TGTGTGACAGGGAAGCCAGTGCAGCGTCTTCTCCATCTTGGTTTGCTTGTTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR GCA 90 bp | CGCACTAGCAGTCACCAGTGGTGTGAGAACACTCTAGCCATCACCAGTGGGGTGATAGCAGATGGTCTGTaGAGCTCCCAGCATCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: RTSSHQWCENTLAITSGVIADGL*SSQHLI Trigger: GATGAGATGCTGGGAGCTGCACAGACCATCTGCTAT...CACCCCACTGGTGATGGCTAGAGTGTTCTCACACCACTGGTGACTGCTAGTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR TCA 90 bp | CAAAACAAGCAAACCAAGATGGAGAAGACGCTGCACTGGCTTCCCTGTCACACAGGAAGTGGCCAGGGTTaGATTGATGAGGGCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QNKQTKMEKTLHWLPCHTGSGQG*IDEGSP Trigger: GGGAGAGCCCTCATCAATTCAACCCTGGCCACTTCC...TGTGTGACAGGGAAGCCAGTGCAGCGTCTTCTCCATCTTGGTTTGCTTGTTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR GCA 90 bp | AGCAGTCACCAGTGGTGTGTGAAAGCTCTTGGTTCTGTGCAACCAGTTCTTAGGTGGCCGTGGTGTCTGTaGCTCCCAGAAACAGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SSHQWCVKALGSVQPVLRWPWCL*LPETGR Trigger: TCGACCTGTTTCTGGGAGGCACAGACACCACGGCCA...CCTAAGAACTGGTTGCACAGAACCAAGAGCTTTCACACACCACTGGTGACTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR GCA 90 bp | TCTAGCAGTCACCAGTGGTGTGTGAAAGCTCTTGGTTCTGTGCAACCAGTTCTTACGCTGCTAAGGCGCTaGACCTCGTGGAGGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSSHQWCVKALGSVQPVLTLLRR*TSWRTA Trigger: TGCTGTCCTCCACGAGGTGCAGCGCCTTAGCAGCGT...AAGAACTGGTTGCACAGAACCAAGAGCTTTCACACACCACTGGTGACTGCTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR TCA 90 bp | ACCAGTTACCAGTCCCCAGCATTTGCATGCACTACTGTTTATAGTATTATGGGACTTCTGATGGGGTCCTaGGAGGTGGCGGAGGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TSYQSPAFACTTVYSIMGLLMGS*EVAEGP Trigger: TGGGCCCTCCGCCACCTCTCAGGACCCCATCAGAAG...TCCCATAATACTATAAACAGTAGTGCATGCAAATGCTGGGGACTGGTAACTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR TCA 90 bp | AGCAGTCACCAGTGGTGTGTGAAAGCTCTTGGTTCTGTGCAACCAGTTCTTAGGCAAATCTTCTGGGGCTaGGGCTGCAGTGTACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SSHQWCVKALGSVQPVLRQIFWG*GCSVPP Trigger: TGGTGGTACACTGCAGCCTCAGCCCCAGAAGATTTG...CCTAAGAACTGGTTGCACAGAACCAAGAGCTTTCACACACCACTGGTGACTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR TCA 90 bp | TCTAGCAGTCACCAGTGGTGTGTGAAAGCTCTTGGTTCTGTGCAACCAGTTCTTCAAATCTTCTGGGGCTaGGGCTGCAGTGTACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SSSHQWCVKALGSVQPVLQIFWG*GCSVPP Trigger: TGGTGGTACACTGCAGCCTCAGCCCCAGAAGATTTG...AAGAACTGGTTGCACAGAACCAAGAGCTTTCACACACCACTGGTGACTGCTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR CCA 90 bp | CAAAACAAGCAAACCAAGATGGAGAAGACGCTGCACTGGCTTCCCTGTCACACAGCAGGAAGGCCTCGTTaGCCACAAAGTTTCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: QNKQTKMEKTLHWLPCHTAGRPR*PQSFHP Trigger: AGGATGGAAACTTTGTGGCCAACGAGGCCTTCCTGC...TGTGTGACAGGGAAGCCAGTGCAGCGTCTTCTCCATCTTGGTTTGCTTGTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR GCA 90 bp | ACCAGTTACCAGTCCCCAGCATTTGCATGCACTACTGTTTATAGTATTATGGGAACACACCCGATGCCCTaGAGAGAAGGGCAGGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TSYQSPAFACTTVYSIMGTHPMP*REGQEG Trigger: GCCTTCCTGCCCTTCTCTGCAGGGCATCGGGTGTGT...TCCCATAATACTATAAACAGTAGTGCATGCAAATGCTGGGGACTGGTAACTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR CCA 90 bp | AGCAGTCACCAGTGGTGTGTGAAAGCTCTTGGTTCTGTGCAACCAGTTCTTAGGAGGTCGATCACCACTTaGATCAGGTTCTCCTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SSHQWCVKALGSVQPVLRRSITT*IRFSSL Trigger: CAGTGAGGAGAACCTGATCCAAGTGGTGATCGACCT...CCTAAGAACTGGTTGCACAGAACCAAGAGCTTTCACACACCACTGGTGACTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR CCA 90 bp | ACCAGTTACCAGTCCCCAGCATTTGCATGCACTACTGTTTATAGTATTATGGGAGCAGTGTGGTGGCCGTaGTGTCTGTGCCTCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TSYQSPAFACTTVYSIMGAVWWP*CLCLPE Trigger: TTCTGGGAGGCACAGACACCACGGCCACCACACTGC...TCCCATAATACTATAAACAGTAGTGCATGCAAATGCTGGGGACTGGTAACTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR CCA 90 bp | TCTAGCAGTCACCAGTGGTGTGTGAAAGCTCTTGGTTCTGTGCAACCAGTTCTTGCAGGAAGGCCTCGTTaGCCACAAAGTTTCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSSHQWCVKALGSVQPVLAGRPR*PQSFHP Trigger: AGGATGGAAACTTTGTGGCCAACGAGGCCTTCCTGC...AAGAACTGGTTGCACAGAACCAAGAGCTTTCACACACCACTGGTGACTGCTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR GCA 90 bp | AGCAGTCACCAGTGGTGTGTGAAAGCTCTTGGTTCTGTGCAACCAGTTCTTAGGGCTGTTCTGAGTTTGTaGCTGATGATTTCGTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: SSHQWCVKALGSVQPVLRAVLSL*LMISWR Trigger: TCGCCACGAAATCATCAGGCACAAACTCAGAACAGC...CCTAAGAACTGGTTGCACAGAACCAAGAGCTTTCACACACCACTGGTGACTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR GCA 90 bp | CCAGCATTTGCATGCACTACTGTTTATAGTATTATGGGAAAGCACTTCCCTTTACCAGGACACACCCGATaGCCTGCAGAGAAGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PAFACTTVYSIMGKHFPLPGHTR*PAEKGR Trigger: CCTGCCCTTCTCTGCAGGGCATCGGGTGTGTCCTGG...TAAAGGGAAGTGCTTTCCCATAATACTATAAACAGTAGTGCATGCAAATGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR CCA 90 bp | CAGCCTCCACTTGTGAATTTTCTAATAGTCAGCCCTATTCCTAAACCTTATCTTGTGCCCAGTGCAGTGTaGTGGCCGTGGTGTCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QPPLVNFLIVSPIPKPYLVPSAV*WPWCLC Trigger: GCACAGACACCACGGCCACCACACTGCACTGGGCAC...AAGATAAGGTTTAGGAATAGGGCTGACTATTAGAAAATTCACAAGTGGAGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR CCA 90 bp | CTGATTCAAAGTCAAACTTTATCAAACGTTATAAAATCCTCCTCTGCCACAGCAGTGCCCAGTGCAGTGTaGTGGCCGTGGTGTCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LIQSQTLSNVIKSSSATAVPSAV*WPWCLC Trigger: GCACAGACACCACGGCCACCACACTGCACTGGGCAC...TGCTGTGGCAGAGGAGGATTTTATAACGTTTGATAAAGTTTGACTTTGAATCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR GCA 90 bp | GAGTGTCAGAGTTTGATTTTTAGGAATTTAGCAGGTATGTGGTGGCTTCTCATTTGGCCGTGGTGTCTGTaGCTCCCAGAAACAGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: ECQSLIFRNLAGMWWLLIWPWCL*LPETGR Trigger: TCGACCTGTTTCTGGGAGGCACAGACACCACGGCCA...AATGAGAAGCCACCACATACCTGCTAAATTCCTAAAAATCAAACTCTGACACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR GCA 90 bp | CTGATTCAAAGTCAAACTTTATCAAACGTTATAAAATCCTCCTCTGCCACAGCAACGCTGCTAAGGCGCTaGACCTCGTGGAGGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LIQSQTLSNVIKSSSATATLLRR*TSWRTA Trigger: TGCTGTCCTCCACGAGGTGCAGCGCCTTAGCAGCGT...TGCTGTGGCAGAGGAGGATTTTATAACGTTTGATAAAGTTTGACTTTGAATCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR GCA 90 bp | CTGATTCAAAGTCAAACTTTATCAAACGTTATAAAATCCTCCTCTGCCACAGCAACACACCCGATGCCCTaGAGAGAAGGGCAGGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LIQSQTLSNVIKSSSATATHPMP*REGQEG Trigger: GCCTTCCTGCCCTTCTCTGCAGGGCATCGGGTGTGT...TGCTGTGGCAGAGGAGGATTTTATAACGTTTGATAAAGTTTGACTTTGAATCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR CCA 90 bp | AATGCTTTCCACCATTTTACCATTTGTGGTGATGATATAGTCACCAGCAAAAGTGCAGTGTGGTGGCCGTaGTGTCTGTGCCTCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: NAFHHFTICGDDIVTSKSAVWWP*CLCLPE Trigger: TTCTGGGAGGCACAGACACCACGGCCACCACACTGC...ACTTTTGCTGGTGACTATATCATCACCACAAATGGTAAAATGGTGGAAAGCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR CCA 90 bp | CCAGCATTTGCATGCACTACTGTTTATAGTATTATGGGAAAGCACTTCCCTTTAGCACGCGCTCTTGGATaGCTCTGTGATGGACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PAFACTTVYSIMGKHFPLARALG*LCDGPG Trigger: ACCTGGTCCATCACAGAGCCATCCAAGAGCGCGTGC...TAAAGGGAAGTGCTTTCCCATAATACTATAAACAGTAGTGCATGCAAATGCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR GCA 90 bp | CAGCCTCCACTTGTGAATTTTCTAATAGTCAGCCCTATTCCTAAACCTTATCTTGACCAGGTATATGAGTaGCCAGTGCAGTGTGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QPPLVNFLIVSPIPKPYLDQVYE*PVQCGG Trigger: GCCACCACACTGCACTGGGCACTCATATACCTGGTC...AAGATAAGGTTTAGGAATAGGGCTGACTATTAGAAAATTCACAAGTGGAGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR CCA 90 bp | TCTTTAGCCACTGATTTATCTTTCCAGCCTCCACTTGTGAATTTTCTAATAGTCGCACGCGCTCTTGGATaGCTCTGTGATGGACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLATDLSFQPPLVNFLIVARALG*LCDGPG Trigger: ACCTGGTCCATCACAGAGCCATCCAAGAGCGCGTGC...GACTATTAGAAAATTCACAAGTGGAGGCTGGAAAGATAAATCAGTGGCTAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR GCA 90 bp | TCTTTAGCCACTGATTTATCTTTCCAGCCTCCACTTGTGAATTTTCTAATAGTCGACCAGGTATATGAGTaGCCAGTGCAGTGTGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLATDLSFQPPLVNFLIVDQVYE*PVQCGG Trigger: GCCACCACACTGCACTGGGCACTCATATACCTGGTC...GACTATTAGAAAATTCACAAGTGGAGGCTGGAAAGATAAATCAGTGGCTAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR TCA 90 bp | GAGTGTCAGAGTTTGATTTTTAGGAATTTAGCAGGTATGTGGTGGCTTCTCATTGAAACTGAAAGGTCCTaGGGAGGGTGGCAAACATCA | + |
|
Preference number: 4 (lower is better) Translates to: ECQSLIFRNLAGMWWLLIETERS*GGWQTS Trigger: TGATGTTTGCCACCCTCCTCAGGACCTTTCAGTTTC...AATGAGAAGCCACCACATACCTGCTAAATTCCTAAAAATCAAACTCTGACACTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR CCA 90 bp | TCTTTAGCCACTGATTTATCTTTCCAGCCTCCACTTGTGAATTTTCTAATAGTCAGGTCGATCACCACTTaGATCAGGTTCTCCTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SLATDLSFQPPLVNFLIVRSITT*IRFSSL Trigger: CAGTGAGGAGAACCTGATCCAAGTGGTGATCGACCT...GACTATTAGAAAATTCACAAGTGGAGGCTGGAAAGATAAATCAGTGGCTAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| 3UTR CAA 72 bp | AACTATTCGAACCCAGTTAGTTACTGTTGCAAGATCTaGCTATGTCCATTTTCCAGGATTGCCATCAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NYSNPVSYCCKI*LCPFSRIAIRA Trigger: AGCTCTGATGGCAATCCTGGAAAATGGACATAGCAAGATCTTGCAACAGTAACTAACTGGGTTCGAATAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR GCA 90 bp | GTGACATTTGATTTCCCCCTAAATGAACCATGTGAACTGATTCAAAGTCAAACTGCTGTTCTGAGTTTGTaGCTGATGATTTCGTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: VTFDFPLNEPCELIQSQTAVLSL*LMISWR Trigger: TCGCCACGAAATCATCAGGCACAAACTCAGAACAGC...AGTTTGACTTTGAATCAGTTCACATGGTTCATTTAGGGGGAAATCAAATGTCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS CCA 90 bp | GGACAGCACGGGTGTAGGGCAGTCGCTCTCGGTCCTCATAGCAGATaGTCTGTGCAGCTCCCAGCATCTCATCCAGCTCCTGCTGCACGC | + |
|
Preference number: 5 (lower is better) Translates to: GQHGCRAVALGPHSR*SVQLPASHPAPAAR Trigger: GCGTGCAGCAGGAGCTGGATGAGATGCTGGGAGCTGCACAGACCATCTGCTATGAGGACCGAGAGCGACTGCCCTACACCCGTGCTGTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 ENSMUST00000182741.2 |
||
| CDS GCA 90 bp | ACGGGTGTAGGGCAGTCGCTCTCGGTCCTCATAGCAGATGGTCTGTaGAGCTCCCAGCATCTCATCCAGCTCCTGCTGCACGCGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TGVGQSLSVLIADGL*SSQHLIQLLLHALL Trigger: CAAGAGCGCGTGCAGCAGGAGCTGGATGAGATGCTGGGAGCTGCACAGACCATCTGCTATGAGGACCGAGAGCGACTGCCCTACACCCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 ENSMUST00000182741.2 |
||
| CDS GCA 90 bp | GAGCTCCATTCGGGCAAGCTGCTCCCCAGGACACACCCGATGCCCTaGAGAGAAGGGCAGGAAGGCCTCGTTGGCCACAAAGTTTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: ELHSGKLLPRTHPMP*REGQEGLVGHKVSI Trigger: GATGGAAACTTTGTGGCCAACGAGGCCTTCCTGCCCTTCTCTGCAGGGCATCGGGTGTGTCCTGGGGAGCAGCTTGCCCGAATGGAGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 ENSMUST00000182741.2 |
||
| CDS GCA 90 bp | CCAGCTCTGCTGCCTCGTGCTGCAGCTGCACCTCTAACGCCTGCTTaGCAAGGCCCAGCTCTCGAAGAGTGGTCAGGCAGAATCGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PALLPRAAAAPLTPA*QGPALEEWSGRIVS Trigger: AGAGACGATTCTGCCTGACCACTCTTCGAGAGCTGGGCCTTGGCAAGCAGGCGTTAGAGGTGCAGCTGCAGCACGAGGCAGCAGAGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182741.2 |
||
| CDS GCA 90 bp | CCCTCTTCCTGGAGAAACACCTTAGCCAGCTCTGCTGCCTCGTGCTaGAGCTGCACCTCTAACGCCTGCTTGCCAAGGCCCAGCTCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: PSSWRNTLASSAASC*SCTSNACLPRPSSR Trigger: TCGAGAGCTGGGCCTTGGCAAGCAGGCGTTAGAGGTGCAGCTGCAGCACGAGGCAGCAGAGCTGGCTAAGGTGTTTCTCCAGGAAGAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182741.2 |
||
| CDS GCA 90 bp | CTCCCCTCTTCCTGGAGAAACACCTTAGCCAGCTCTGCTGCCTCGTaGTGCAGCTGCACCTCTAACGCCTGCTTGCCAAGGCCCAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPSSWRNTLASSAAS*CSCTSNACLPRPSS Trigger: AGAGCTGGGCCTTGGCAAGCAGGCGTTAGAGGTGCAGCTGCAGCACGAGGCAGCAGAGCTGGCTAAGGTGTTTCTCCAGGAAGAGGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182741.2 |
||
| CDS TCA 90 bp | GGGCTGAGGCTGCTCTGGCGAAGCACTGCGCAAATCTTCTGGGGCTaGGGCTGCAGTGTACCACCAAAGACATATTCCAGCCCGAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GLRLLWRSTAQIFWG*GCSVPPKTYSSPRS Trigger: GGACCTCGGGCTGGAATATGTCTTTGGTGGTACACTGCAGCCTCAGCCCCAGAAGATTTGCGCAGTGCTTCGCCAGAGCAGCCTCAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 ENSMUST00000182741.2 |
||
| CDS GCA 90 bp | TTAGCCAGCTCTGCTGCCTCGTGCTGCAGCTGCACCTCTAACGCCTaGTTGCCAAGGCCCAGCTCTCGAAGAGTGGTCAGGCAGAATCGT | + |
|
Preference number: 5 (lower is better) Translates to: LASSAASCCSCTSNA*LPRPSSRRVVRQNR Trigger: ACGATTCTGCCTGACCACTCTTCGAGAGCTGGGCCTTGGCAAGCAGGCGTTAGAGGTGCAGCTGCAGCACGAGGCAGCAGAGCTGGCTAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182741.2 |
||
| CDS GCA 90 bp | TCCTGGAGAAACACCTTAGCCAGCTCTGCTGCCTCGTGCTGCAGCTaGACCTCTAACGCCTGCTTGCCAAGGCCCAGCTCTCGAAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SWRNTLASSAASCCS*TSNACLPRPSSRRV Trigger: CACTCTTCGAGAGCTGGGCCTTGGCAAGCAGGCGTTAGAGGTGCAGCTGCAGCACGAGGCAGCAGAGCTGGCTAAGGTGTTTCTCCAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182741.2 |
||
| CDS GCA 90 bp | CTGCACGCGCTCTTGGATGGCTCTGTGATGGACCAGGTATATGAGTaGCCAGTGCAGTGTGGTGGCCGTGGTGTCTGTGCCTCCCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LHALLDGSVMDQVYE*PVQCGGRGVCASQK Trigger: TTTCTGGGAGGCACAGACACCACGGCCACCACACTGCACTGGGCACTCATATACCTGGTCCATCACAGAGCCATCCAAGAGCGCGTGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 ENSMUST00000182741.2 |
||
| CDS TCA 90 bp | GCCCGAGGTCCTGGCTCCCTTCTGGTAGTTGAAACTGAAAGGTCCTaGGGAGGGTGGCAAACATCAGGAAGAGCTCCATTCGGGCAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ARGPGSLLVVETERS*GGWQTSGRAPFGQA Trigger: AGCTTGCCCGAATGGAGCTCTTCCTGATGTTTGCCACCCTCCTCAGGACCTTTCAGTTTCAACTACCAGAAGGGAGCCAGGACCTCGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 ENSMUST00000182741.2 |
||
| CDS-3UTR CAA 90 bp | AGCAGTCACCAGTGGTGTGTGAAAGCTCTTGGTTCTGTGCAACCAGTTCTTAGGCTGCTGCACGCGCTCTaGGATGGCTCTGTGATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SSHQWCVKALGSVQPVLRLLHAL*DGSVMD Trigger: GTCCATCACAGAGCCATCCAAGAGCGCGTGCAGCAG...CCTAAGAACTGGTTGCACAGAACCAAGAGCTTTCACACACCACTGGTGACTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS TCA 90 bp | CCCAGCACTCAGGGTCATACAACACAGAGGCCAGATTGGGCAGGATaGTGGTTCCCTTGGGGACATAATAACCATGCATCCAGGTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PSTQGHTTQRPDWAG*WFPWGHNNHASRWK Trigger: CTTCCACCTGGATGCATGGTTATTATGTCCCCAAGGGAACCATCATCCTGCCCAATCTGGCCTCTGTGTTGTATGACCCTGAGTGCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 ENSMUST00000182741.2 |
||
| CDS-3UTR CAA 90 bp | CAAAACAAGCAAACCAAGATGGAGAAGACGCTGCACTGGCTTCCCTGTCACACAGTGGCCAGGGTTGAATaGATGAGGGCTCTCCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: QNKQTKMEKTLHWLPCHTVARVE*MRALPA Trigger: TGCTGGGAGAGCCCTCATCAATTCAACCCTGGCCAC...TGTGTGACAGGGAAGCCAGTGCAGCGTCTTCTCCATCTTGGTTTGCTTGTTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR CAA 90 bp | AGCAGTCACCAGTGGTGTGTGAAAGCTCTTGGTTCTGTGCAACCAGTTCTTAGGGTGGCCAGGGTTGAATaGATGAGGGCTCTCCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SSHQWCVKALGSVQPVLRVARVE*MRALPA Trigger: TGCTGGGAGAGCCCTCATCAATTCAACCCTGGCCAC...CCTAAGAACTGGTTGCACAGAACCAAGAGCTTTCACACACCACTGGTGACTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR CAA 90 bp | CAAAACAAGCAAACCAAGATGGAGAAGACGCTGCACTGGCTTCCCTGTCACACAAACACAGAGGCCAGATaGGGCAGGATGATGGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: QNKQTKMEKTLHWLPCHTNTEAR*GRMMVP Trigger: GGGAACCATCATCCTGCCCAATCTGGCCTCTGTGTT...TGTGTGACAGGGAAGCCAGTGCAGCGTCTTCTCCATCTTGGTTTGCTTGTTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR CAA 90 bp | TCTAGCAGTCACCAGTGGTGTGTGAAAGCTCTTGGTTCTGTGCAACCAGTTCTTAACACAGAGGCCAGATaGGGCAGGATGATGGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SSSHQWCVKALGSVQPVLNTEAR*GRMMVP Trigger: GGGAACCATCATCCTGCCCAATCTGGCCTCTGTGTT...AAGAACTGGTTGCACAGAACCAAGAGCTTTCACACACCACTGGTGACTGCTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS TCA 90 bp | CTCACTGAATGTAGAGACAGGGTCATCGATGGCCTTGGTGATTTGTaGCAGGTAGCAGTTGATGAAATCCTTGGGGGCCTCAGCTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LTECRDRVIDGLGDL*QVAVDEILGGLSCS Trigger: AGAACAGCTGAGGCCCCCAAGGATTTCATCAACTGCTACCTGTCACAAATCACCAAGGCCATCGATGACCCTGTCTCTACATTCAGTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 ENSMUST00000182741.2 |
||
| CDS-3UTR CAA 90 bp | TCTAGCAGTCACCAGTGGTGTGTGAAAGCTCTTGGTTCTGTGCAACCAGTTCTTCAGTTGATGAAATCCTaGGGGGCCTCAGCTGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSSHQWCVKALGSVQPVLQLMKS*GASAVL Trigger: CAGAACAGCTGAGGCCCCCAAGGATTTCATCAACTG...AAGAACTGGTTGCACAGAACCAAGAGCTTTCACACACCACTGGTGACTGCTAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR CAA 90 bp | GAGTGTCAGAGTTTGATTTTTAGGAATTTAGCAGGTATGTGGTGGCTTCTCATTCTGCTGCACGCGCTCTaGGATGGCTCTGTGATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ECQSLIFRNLAGMWWLLILLHAL*DGSVMD Trigger: GTCCATCACAGAGCCATCCAAGAGCGCGTGCAGCAG...AATGAGAAGCCACCACATACCTGCTAAATTCCTAAAAATCAAACTCTGACACTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR CAA 90 bp | CAGCCTCCACTTGTGAATTTTCTAATAGTCAGCCCTATTCCTAAACCTTATCTTGGCAGGAAGGCCTCGTaGGCCACAAAGTTTCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: QPPLVNFLIVSPIPKPYLGRKAS*ATKFPS Trigger: GGATGGAAACTTTGTGGCCAACGAGGCCTTCCTGCC...AAGATAAGGTTTAGGAATAGGGCTGACTATTAGAAAATTCACAAGTGGAGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR CAA 90 bp | AATGCTTTCCACCATTTTACCATTTGTGGTGATGATATAGTCACCAGCAAAAGTGGCAGGAAGGCCTCGTaGGCCACAAAGTTTCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: NAFHHFTICGDDIVTSKSGRKAS*ATKFPS Trigger: GGATGGAAACTTTGTGGCCAACGAGGCCTTCCTGCC...ACTTTTGCTGGTGACTATATCATCACCACAAATGGTAAAATGGTGGAAAGCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR CAA 90 bp | TCTTTAGCCACTGATTTATCTTTCCAGCCTCCACTTGTGAATTTTCTAATAGTCCAGTTGATGAAATCCTaGGGGGCCTCAGCTGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLATDLSFQPPLVNFLIVQLMKS*GASAVL Trigger: CAGAACAGCTGAGGCCCCCAAGGATTTCATCAACTG...GACTATTAGAAAATTCACAAGTGGAGGCTGGAAAGATAAATCAGTGGCTAAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR CAA 90 bp | TCTTTAGCCACTGATTTATCTTTCCAGCCTCCACTTGTGAATTTTCTAATAGTCCAGGTCGATCACCACTaGGATCAGGTTCTCCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: SLATDLSFQPPLVNFLIVQVDHH*DQVLLT Trigger: AGTGAGGAGAACCTGATCCAAGTGGTGATCGACCTG...GACTATTAGAAAATTCACAAGTGGAGGCTGGAAAGATAAATCAGTGGCTAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR CAA 90 bp | CCAGCATTTGCATGCACTACTGTTTATAGTATTATGGGAAAGCACTTCCCTTTATCAGCTGTTCTGAGTTaGTGCCTGATGATTTCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PAFACTTVYSIMGKHFPLSAVLS*CLMISW Trigger: CCACGAAATCATCAGGCACAAACTCAGAACAGCTGA...TAAAGGGAAGTGCTTTCCCATAATACTATAAACAGTAGTGCATGCAAATGCTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS-3UTR CAA 90 bp | CAGCCTCCACTTGTGAATTTTCTAATAGTCAGCCCTATTCCTAAACCTTATCTTTCAGCTGTTCTGAGTTaGTGCCTGATGATTTCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: QPPLVNFLIVSPIPKPYLSAVLS*CLMISW Trigger: CCACGAAATCATCAGGCACAAACTCAGAACAGCTGA...AAGATAAGGTTTAGGAATAGGGCTGACTATTAGAAAATTCACAAGTGGAGGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 |
||
| CDS GCA 72 bp | TCGGGCAAGCTGCTCCCCAGGACACACCCGATGCCCTaGAGAGAAGGGCAGGAAGGCCTCGTTGGCCACAAA | + |
|
Preference number: 6 (lower is better) Translates to: SGKLLPRTHPMP*REGQEGLVGHK Trigger: TTTGTGGCCAACGAGGCCTTCCTGCCCTTCTCTGCAGGGCATCGGGTGTGTCCTGGGGAGCAGCTTGCCCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 ENSMUST00000182741.2 |
||
| CDS CAA 72 bp | GCTGCCTCGTGCTGCAGCTGCACCTCTAACGCCTGCTaGCCAAGGCCCAGCTCTCGAAGAGTGGTCAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: AASCCSCTSNAC*PRPSSRRVVRQ Trigger: CTGCCTGACCACTCTTCGAGAGCTGGGCCTTGGCAAGCAGGCGTTAGAGGTGCAGCTGCAGCACGAGGCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182741.2 |
||
| CDS CAA 90 bp | GCCAGCTCTGCTGCCTCGTGCTGCAGCTGCACCTCTAACGCCTGCTaGCCAAGGCCCAGCTCTCGAAGAGTGGTCAGGCAGAATCGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: ASSAASCCSCTSNAC*PRPSSRRVVRQNRL Trigger: GAGACGATTCTGCCTGACCACTCTTCGAGAGCTGGGCCTTGGCAAGCAGGCGTTAGAGGTGCAGCTGCAGCACGAGGCAGCAGAGCTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182741.2 |
||
| CDS GCA 72 bp | CTGCCTCGTGCTGCAGCTGCACCTCTAACGCCTGCTTaGCAAGGCCCAGCTCTCGAAGAGTGGTCAGGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LPRAAAAPLTPA*QGPALEEWSGR Trigger: TCTGCCTGACCACTCTTCGAGAGCTGGGCCTTGGCAAGCAGGCGTTAGAGGTGCAGCTGCAGCACGAGGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182741.2 |
||
| CDS CAA 90 bp | TCTCGGAAGAATGGGGTGAGCGGCCTCCCAGAGAACTGTTCCGAGTaGGAGACCAGGGCTTCCTTCACTGCTCGGAAGCCGCTCAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: SRKNGVSGLPENCSE*ETRASFTARKPLST Trigger: GGTGCTGAGCGGCTTCCGAGCAGTGAAGGAAGCCCTGGTCTCCAACTCGGAACAGTTCTCTGGGAGGCCGCTCACCCCATTCTTCCGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182741.2 |
||
| CDS GCA 72 bp | GGGCAGTCGCTCTCGGTCCTCATAGCAGATGGTCTGTaGAGCTCCCAGCATCTCATCCAGCTCCTGCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: GQSLSVLIADGL*SSQHLIQLLLH Trigger: GTGCAGCAGGAGCTGGATGAGATGCTGGGAGCTGCACAGACCATCTGCTATGAGGACCGAGAGCGACTGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 ENSMUST00000182741.2 |
||
| CDS GCA 72 bp | AACACCTTAGCCAGCTCTGCTGCCTCGTGCTGCAGCTaGACCTCTAACGCCTGCTTGCCAAGGCCCAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: NTLASSAASCCS*TSNACLPRPSS Trigger: AGAGCTGGGCCTTGGCAAGCAGGCGTTAGAGGTGCAGCTGCAGCACGAGGCAGCAGAGCTGGCTAAGGTGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182741.2 |
||
| CDS GCA 72 bp | TGGAGAAACACCTTAGCCAGCTCTGCTGCCTCGTGCTaGAGCTGCACCTCTAACGCCTGCTTGCCAAGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: WRNTLASSAASC*SCTSNACLPRP Trigger: GGGCCTTGGCAAGCAGGCGTTAGAGGTGCAGCTGCAGCACGAGGCAGCAGAGCTGGCTAAGGTGTTTCTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182741.2 |
||
| CDS GCA 72 bp | TCCTGGAGAAACACCTTAGCCAGCTCTGCTGCCTCGTaGTGCAGCTGCACCTCTAACGCCTGCTTGCCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SWRNTLASSAAS*CSCTSNACLPR Trigger: CCTTGGCAAGCAGGCGTTAGAGGTGCAGCTGCAGCACGAGGCAGCAGAGCTGGCTAAGGTGTTTCTCCAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182741.2 |
||
| CDS CCA 72 bp | GGGTGTAGGGCAGTCGCTCTCGGTCCTCATAGCAGATaGTCTGTGCAGCTCCCAGCATCTCATCCAGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GCRAVALGPHSR*SVQLPASHPAP Trigger: AGGAGCTGGATGAGATGCTGGGAGCTGCACAGACCATCTGCTATGAGGACCGAGAGCGACTGCCCTACACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 ENSMUST00000182741.2 |
||
| CDS CAA 90 bp | CTGTGCAGCTCCCAGCATCTCATCCAGCTCCTGCTGCACGCGCTCTaGGATGGCTCTGTGATGGACCAGGTATATGAGTGCCCAGTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LCSSQHLIQLLLHAL*DGSVMDQVYECPVQ Trigger: CTGCACTGGGCACTCATATACCTGGTCCATCACAGAGCCATCCAAGAGCGCGTGCAGCAGGAGCTGGATGAGATGCTGGGAGCTGCACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 ENSMUST00000182741.2 |
||
| CDS TCA 72 bp | CTGCTCTGGCGAAGCACTGCGCAAATCTTCTGGGGCTaGGGCTGCAGTGTACCACCAAAGACATATTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LLWRSTAQIFWG*GCSVPPKTYSS Trigger: GCTGGAATATGTCTTTGGTGGTACACTGCAGCCTCAGCCCCAGAAGATTTGCGCAGTGCTTCGCCAGAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 ENSMUST00000182741.2 |
||
| CDS CCA 72 bp | TGGTTCCCTTGGGGACATAATAACCATGCATCCAGGTaGAAGTCACACACTGGCGTACAGCGCCCACAGCTA | + |
|
Preference number: 6 (lower is better) Translates to: WFPWGHNNHASR*KSHTGVQRPQL Trigger: TAGCTGTGGGCGCTGTACGCCAGTGTGTGACTTCCACCTGGATGCATGGTTATTATGTCCCCAAGGGAACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 ENSMUST00000182741.2 |
||
| CDS CCA 72 bp | GTGTCTGTGCCTCCCAGAAACAGGTCGATCACCACTTaGATCAGGTTCTCCTCACTGAATGTAGAGACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: VSVPPRNRSITT*IRFSSLNVETG Trigger: CCCTGTCTCTACATTCAGTGAGGAGAACCTGATCCAAGTGGTGATCGACCTGTTTCTGGGAGGCACAGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 ENSMUST00000182741.2 |
||
| CDS TCA 72 bp | TGTAGAGACAGGGTCATCGATGGCCTTGGTGATTTGTaGCAGGTAGCAGTTGATGAAATCCTTGGGGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: CRDRVIDGLGDL*QVAVDEILGGL Trigger: GAGGCCCCCAAGGATTTCATCAACTGCTACCTGTCACAAATCACCAAGGCCATCGATGACCCTGTCTCTACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 ENSMUST00000182741.2 |
||
| CDS TCA 72 bp | CAGGGTCATACAACACAGAGGCCAGATTGGGCAGGATaGTGGTTCCCTTGGGGACATAATAACCATGCATCC | + |
|
Preference number: 6 (lower is better) Translates to: QGHTTQRPDWAG*WFPWGHNNHAS Trigger: GGATGCATGGTTATTATGTCCCCAAGGGAACCATCATCCTGCCCAATCTGGCCTCTGTGTTGTATGACCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023513.12 ENSMUST00000182508.9 ENSMUST00000182741.2 |
||
| CDS TCA 72 bp | CACCTTTTTCTCCAAATAAGTCTCGGAAGAATGGGGTaGGCGGCCTCCCAGAGAACTGTTCCGAGTTGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: HLFLQISLGRMG*AASQRTVPSWR Trigger: TCTCCAACTCGGAACAGTTCTCTGGGAGGCCGCTCACCCCATTCTTCCGAGACTTATTTGGAGAAAAAGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182741.2 |
||
| CDS TCA 72 bp | ATTAGTTCCAGGAAGATGGGCTCCTCAGAGAGGAAATaGTGGCCAAACACCAGGGTCCCAATAACTCTCGTT | + |
|
Preference number: 6 (lower is better) Translates to: ISSRKMGSSERK*WPNTRVPITLV Trigger: AACGAGAGTTATTGGGACCCTGGTGTTTGGCCATCATTTCCTCTCTGAGGAGCCCATCTTCCTGGAACTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182741.2 |
||
| CDS CAA 72 bp | AGGCAGAATCGTCTCTGTTGTCGCCATGTAAGCCCATaGCTGCAGATAACACCTTTTTCTCCAAATAAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: RQNRLCCRHVSP*LQITPFSPNKS Trigger: AGACTTATTTGGAGAAAAAGGTGTTATCTGCAGCAATGGGCTTACATGGCGACAACAGAGACGATTCTGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182741.2 |
||