Pregenerated sensors for CYP2A4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074254Ensembl transcript IDs: ENSMUST00000098657.5
Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | ACCTTTGAAATATCCTCTGCAAGTCTACGAAGTGTCCTCTGTTTCTTCTGTACCCCCAACGAAGGGCAGTaGGGTGGGTCCTGGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: TFEISSASLRSVLCFFCTPNEGQ*GGSWRQ Trigger: CTGCCTCCAGGACCCACCCCACTGCCCTTCGTTGGG...GGTACAGAAGAAACAGAGGACACTTCGTAGACTTGCAGAGGATATTTCAAAGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098657.5 |
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| CDS-3UTR TCA 90 bp | ACCTTTGAAATATCCTCTGCAAGTCTACGAAGTGTCCTCTGTTTCTTCTGTACCCCACCAGAGCTTCCTTaGCTGTCTCCTGTCCGCACA | + |
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Preference number: 4 (lower is better) Translates to: TFEISSASLRSVLCFFCTPPELP*LSPVRT Trigger: TGTGCGGACAGGAGACAGTCAAGGAAGCTCTGGTGG...GGTACAGAAGAAACAGAGGACACTTCGTAGACTTGCAGAGGATATTTCAAAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098657.5 |
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| CDS-3UTR TCA 90 bp | ACCTTTGAAATATCCTCTGCAAGTCTACGAAGTGTCCTCTGTTTCTTCTGTACCGTTCGTCTTCCGAAATaGATCGATGAGAAAGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: TFEISSASLRSVLCFFCTVRLPK*IDEKAR Trigger: GCGGGCTTTCTCATCGATTCATTTCGGAAGACGAAC...GGTACAGAAGAAACAGAGGACACTTCGTAGACTTGCAGAGGATATTTCAAAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098657.5 |
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| CDS-3UTR TCA 90 bp | ACCTTTGAAATATCCTCTGCAAGTCTACGAAGTGTCCTCTGTTTCTTCTGTACCGGAAGTGCTTTGGGTTaGAGTCTTTGGGGTTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: TFEISSASLRSVLCFFCTGSALG*SLWGWR Trigger: TCTCCAACCCCAAAGACTTCAACCCAAAGCACTTCC...GGTACAGAAGAAACAGAGGACACTTCGTAGACTTGCAGAGGATATTTCAAAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098657.5 |
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| CDS-3UTR CCA 90 bp | ACCTTTGAAATATCCTCTGCAAGTCTACGAAGTGTCCTCTGTTTCTTCTGTACCGAGGTAGCAGTGAACTaGAGGCTTCCCAGCATCATT | + |
|
Preference number: 4 (lower is better) Translates to: TFEISSASLRSVLCFFCTEVAVN*RLPSII Trigger: AATGATGCTGGGAAGCCTCCAGTTCACTGCTACCTC...GGTACAGAAGAAACAGAGGACACTTCGTAGACTTGCAGAGGATATTTCAAAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098657.5 |
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| CDS-3UTR TCA 90 bp | TTTGAAATATCCTCTGCAAGTCTACGAAGTGTCCTCTGTTTCTTCTGTACCTTTTGGAGGCAGCTTTCCTaGGAGCTTTCTCTGCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: FEISSASLRSVLCFFCTFWRQLS*ELSLLP Trigger: TGGAAGCAGAGAAAGCTCTCAGGAAAGCTGCCTCCA...AAAGGTACAGAAGAAACAGAGGACACTTCGTAGACTTGCAGAGGATATTTCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098657.5 |
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| CDS-3UTR CCA 90 bp | ACCTTTGAAATATCCTCTGCAAGTCTACGAAGTGTCCTCTGTTTCTTCTGTACCCGATCAATCTCCTCATaGACCTTGGCCTCAATATCT | + |
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Preference number: 4 (lower is better) Translates to: TFEISSASLRSVLCFFCTRSISS*TLASIS Trigger: AGATATTGAGGCCAAGGTCCATGAGGAGATTGATCG...GGTACAGAAGAAACAGAGGACACTTCGTAGACTTGCAGAGGATATTTCAAAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098657.5 |
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| CDS-3UTR CCA 90 bp | ACCTTTGAAATATCCTCTGCAAGTCTACGAAGTGTCCTCTGTTTCTTCTGTACCAGGTCTGCAAATCTCTaGATCTCATGGATTACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TFEISSASLRSVLCFFCTRSANL*ISWITA Trigger: GGCTGTAATCCATGAGATCCAGAGATTTGCAGACCT...GGTACAGAAGAAACAGAGGACACTTCGTAGACTTGCAGAGGATATTTCAAAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098657.5 |
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| CDS-3UTR CCA 90 bp | ACCTTTGAAATATCCTCTGCAAGTCTACGAAGTGTCCTCTGTTTCTTCTGTACCATACTTCAGTACCCTTaGGGAGGAGGAAATCTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: TFEISSASLRSVLCFFCTILQYP*GGGNLE Trigger: TTCGAGATTTCCTCCTCCCCAAGGGTACTGAAGTAT...GGTACAGAAGAAACAGAGGACACTTCGTAGACTTGCAGAGGATATTTCAAAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098657.5 |
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| CDS-3UTR CCA 90 bp | TTTGAAATATCCTCTGCAAGTCTACGAAGTGTCCTCTGTTTCTTCTGTACCTTTCATAGTGTAGGTTGGTaGGATCGTGACAAAGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FEISSASLRSVLCFFCTFHSVGW*DRDKAH Trigger: GTGGGCTTTGTCACGATCCCACCAACCTACACTATG...AAAGGTACAGAAGAAACAGAGGACACTTCGTAGACTTGCAGAGGATATTTCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098657.5 |
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| CDS-3UTR TCA 90 bp | ACCTTTGAAATATCCTCTGCAAGTCTACGAAGTGTCCTCTGTTTCTTCTGTACCATCCCAGATAGATGGTaGATACAGGACCATAACGTT | + |
|
Preference number: 4 (lower is better) Translates to: TFEISSASLRSVLCFFCTIPDRW*IQDHNV Trigger: AACGTTATGGTCCTGTATTCACCATCTATCTGGGAT...GGTACAGAAGAAACAGAGGACACTTCGTAGACTTGCAGAGGATATTTCAAAGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098657.5 |
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| CDS-3UTR CCA 90 bp | ACCTTTGAAATATCCTCTGCAAGTCTACGAAGTGTCCTCTGTTTCTTCTGTACCTGTAGAACTCAGTATTaGGGTTCTTCTTCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TFEISSASLRSVLCFFCTCRTQY*GSSSPP Trigger: TGGAGGAGAAGAAGAACCCCAATACTGAGTTCTACA...GGTACAGAAGAAACAGAGGACACTTCGTAGACTTGCAGAGGATATTTCAAAGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098657.5 |
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| CDS-3UTR TCA 90 bp | TTTGAAATATCCTCTGCAAGTCTACGAAGTGTCCTCTGTTTCTTCTGTACCTTTTATCTGGGTACTTCATaGGCAACAGAAAGCCATAGC | + |
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Preference number: 4 (lower is better) Translates to: FEISSASLRSVLCFFCTFYLGTS*ATESHS Trigger: GCTATGGCTTTCTGTTGCTCATGAAGTACCCAGATA...AAAGGTACAGAAGAAACAGAGGACACTTCGTAGACTTGCAGAGGATATTTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098657.5 |
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| CDS-3UTR CCA 90 bp | TTTGAAATATCCTCTGCAAGTCTACGAAGTGTCCTCTGTTTCTTCTGTACCTTTCTTGGCCTCAATATCTaGGTACTTCATGAGCAACAG | + |
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Preference number: 4 (lower is better) Translates to: FEISSASLRSVLCFFCTFLGLNI*VLHEQQ Trigger: CTGTTGCTCATGAAGTACCCAGATATTGAGGCCAAG...AAAGGTACAGAAGAAACAGAGGACACTTCGTAGACTTGCAGAGGATATTTCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098657.5 |
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| CDS-3UTR CCA 90 bp | ACCTTTGAAATATCCTCTGCAAGTCTACGAAGTGTCCTCTGTTTCTTCTGTACCTGTGTGGATTTGAAGTaGAAGTTCTGCATGATGTTT | + |
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Preference number: 4 (lower is better) Translates to: TFEISSASLRSVLCFFCTCVDLK*KFCMMF Trigger: AAACATCATGCAGAACTTCCACTTCAAATCCACACA...GGTACAGAAGAAACAGAGGACACTTCGTAGACTTGCAGAGGATATTTCAAAGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098657.5 |
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| CDS-3UTR CCA 90 bp | TTTGAAATATCCTCTGCAAGTCTACGAAGTGTCCTCTGTTTCTTCTGTACCTTTAATACCGTTTTCCAATaGAAAAGGGCACAAAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: FEISSASLRSVLCFFCTFNTVFQ*KRAQRH Trigger: ATGCCTTTGTGCCCTTTTCCATTGGAAAACGGTATT...AAAGGTACAGAAGAAACAGAGGACACTTCGTAGACTTGCAGAGGATATTTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098657.5 |
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| CDS GCA 90 bp | ACATCGATGTCCTGGGGTTCCTGTGTGGATTTGAAGTGGAAGTTCTaGATGATGTTTGTGAGGAAGAGGAAGAGTTCCATCCTAGCCAGT | + |
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Preference number: 5 (lower is better) Translates to: TSMSWGSCVDLKWKF*MMFVRKRKSSILAS Trigger: ACTGGCTAGGATGGAACTCTTCCTCTTCCTCACAAACATCATGCAGAACTTCCACTTCAAATCCACACAGGAACCCCAGGACATCGATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098657.5 |
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| CDS-3UTR CAA 90 bp | ACCTTTGAAATATCCTCTGCAAGTCTACGAAGTGTCCTCTGTTTCTTCTGTACCGGTTCCTGTGTGGATTaGAAGTGGAAGTTCTGCATG | + |
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Preference number: 5 (lower is better) Translates to: TFEISSASLRSVLCFFCTGSCVD*KWKFCM Trigger: CATGCAGAACTTCCACTTCAAATCCACACAGGAACC...GGTACAGAAGAAACAGAGGACACTTCGTAGACTTGCAGAGGATATTTCAAAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098657.5 |
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