Pregenerated sensors for CYP2A12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060407Ensembl transcript IDs: ENSMUST00000075552.7
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CCATGCACGTGGTCCCTTCTTAATCCCCAGGTCTTTATCTTCTCTCTTCACTCCGCTCTCCCTCCCTCTTaGCCCATCTTGGCTCAACCC | + |
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Preference number: 2 (lower is better) Translates to: PCTWSLLNPQVFIFSLHSALPPS*PILAQP Trigger: GGGTTGAGCCAAGATGGGTCAAGAGGGAGGGAGAGC...GGAGTGAAGAGAGAAGATAAAGACCTGGGGATTAAGAAGGGACCACGTGCATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075552.7 |
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| 3UTR-3UTR CAA 90 bp | CATGCACGTGGTCCCTTCTTAATCCCCAGGTCTTTATCTTCTCTCTTCACTCCAGGCTCTCCCTCCCTCTaGACCCATCTTGGCTCAACC | + |
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Preference number: 3 (lower is better) Translates to: HARGPFLIPRSLSSLFTPGSPSL*THLGST Trigger: GGTTGAGCCAAGATGGGTCAAGAGGGAGGGAGAGCC...TGGAGTGAAGAGAGAAGATAAAGACCTGGGGATTAAGAAGGGACCACGTGCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075552.7 |
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| CDS-3UTR CCA 90 bp | CTCCACCTTCCTTCTAGCACCACTTCAGGCTCTCCCTCCCTCTTGACCCATCTTTCAGGAAGGCCAGAATaGCTAGGAGGAGCAGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: LHLPSSTTSGSPSLLTHLSGRPE*LGGAAL Trigger: CAGGGCTGCTCCTCCTAGCCATTCTGGCCTTCCTGA...AAGATGGGTCAAGAGGGAGGGAGAGCCTGAAGTGGTGCTAGAAGGAAGGTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075552.7 |
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| CDS-3UTR CCA 90 bp | CTCCACCTTCCTTCTAGCACCACTTCAGGCTCTCCCTCCCTCTTGACCCATCTTAGATGGTGGGGTCAATaGGGGCTCCACAAGTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: LHLPSSTTSGSPSLLTHLRWWGQ*GLHKCP Trigger: AGGGCACTTGTGGAGCCCCCATTGACCCCACCATCT...AAGATGGGTCAAGAGGGAGGGAGAGCCTGAAGTGGTGCTAGAAGGAAGGTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075552.7 |
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| CDS-3UTR CCA 90 bp | CTCCACCTTCCTTCTAGCACCACTTCAGGCTCTCCCTCCCTCTTGACCCATCTTCAAAGGAATGGGTCCTaGGGGCAACTTCCCCCTGAT | + |
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Preference number: 4 (lower is better) Translates to: LHLPSSTTSGSPSLLTHLQRNGS*GQLPPD Trigger: ATCAGGGGGAAGTTGCCCCCAGGACCCATTCCTTTG...AAGATGGGTCAAGAGGGAGGGAGAGCCTGAAGTGGTGCTAGAAGGAAGGTGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075552.7 |
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| CDS-3UTR TCA 90 bp | TCACTCCACCTTCCTTCTAGCACCACTTCAGGCTCTCCCTCCCTCTTGACCCATTGCCCTGCAACATCTTaGTCAAACAGCCTGCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: SLHLPSSTTSGSPSLLTHCPATS*SNSLPP Trigger: AGGAGGCAGGCTGTTTGATCAAGATGTTGCAGGGCA...ATGGGTCAAGAGGGAGGGAGAGCCTGAAGTGGTGCTAGAAGGAAGGTGGAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075552.7 |
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| CDS-3UTR TCA 90 bp | CTCCACCTTCCTTCTAGCACCACTTCAGGCTCTCCCTCCCTCTTGACCCATCTTGAGCTGCCCTGTGGGTaGAGCAGCAAATTTGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: LHLPSSTTSGSPSLLTHLELPCG*SSKFVH Trigger: GTGAACAAATTTGCTGCTTCACCCACAGGGCAGCTC...AAGATGGGTCAAGAGGGAGGGAGAGCCTGAAGTGGTGCTAGAAGGAAGGTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075552.7 |
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| CDS-3UTR TCA 90 bp | TCACTCCACCTTCCTTCTAGCACCACTTCAGGCTCTCCCTCCCTCTTGACCCATTCTGCAAGATGGTGGTaGAGAACAGGAACAGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: SLHLPSSTTSGSPSLLTHSARWW*RTGTAP Trigger: TGGAGCTGTTCCTGTTCTTCACCACCATCTTGCAGA...ATGGGTCAAGAGGGAGGGAGAGCCTGAAGTGGTGCTAGAAGGAAGGTGGAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075552.7 |
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| CDS-3UTR GCA 90 bp | TCACTCCACCTTCCTTCTAGCACCACTTCAGGCTCTCCCTCCCTCTTGACCCATCATTGGAGGCTGTTTTaGTCAGGTAGATGGTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: SLHLPSSTTSGSPSLLTHHWRLF*SGRWWG Trigger: ACCCCACCATCTACCTGAGCAAAACAGCCTCCAATG...ATGGGTCAAGAGGGAGGGAGAGCCTGAAGTGGTGCTAGAAGGAAGGTGGAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075552.7 |
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| CDS-3UTR GCA 90 bp | CCATGCACGTGGTCCCTTCTTAATCCCCAGGTCTTTATCTTCTCTCTTCACTCCCACCTCGCTTGCCCATaGCGAAATCTCTCAGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: PCTWSLLNPQVFIFSLHSHLACP*RNLSVW Trigger: CCACACTGAGAGATTTCGGCATGGGCAAGCGAGGTG...GGAGTGAAGAGAGAAGATAAAGACCTGGGGATTAAGAAGGGACCACGTGCATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075552.7 |
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| CDS-3UTR CCA 90 bp | CGTGGTCCCTTCTTAATCCCCAGGTCTTTATCTTCTCTCTTCACTCCACCTTCCACACTTCAGTGCCCTTaGGGAGGAAGAAGCCACGGA | + |
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Preference number: 4 (lower is better) Translates to: RGPFLIPRSLSSLFTPPSTLQCP*GGRSHG Trigger: TCCGTGGCTTCTTCCTCCCCAAGGGCACTGAAGTGT...GGAAGGTGGAGTGAAGAGAGAAGATAAAGACCTGGGGATTAAGAAGGGACCACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075552.7 |
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| CDS-3UTR TCA 90 bp | GTGAGTAGTGTTTTCTATTTCTTCCATGCACGTGGTCCCTTCTTAATCCCCAGGGCCCAAGGTGGATGGTaGACACAGGGCCATAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: VSSVFYFFHARGPFLIPRAQGGW*TQGHSA Trigger: AGCACTATGGCCCTGTGTTCACCATCCACCTTGGGC...CCTGGGGATTAAGAAGGGACCACGTGCATGGAAGAAATAGAAAACACTACTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075552.7 |
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| CDS-3UTR TCA 90 bp | CCATGCACGTGGTCCCTTCTTAATCCCCAGGTCTTTATCTTCTCTCTTCACTCCATCTCTGGATCTCATTaGTCACAGCCTGGGTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: PCTWSLLNPQVFIFSLHSISGSH*SQPGCR Trigger: CCTACACCCAGGCTGTGATCAATGAGATCCAGAGAT...GGAGTGAAGAGAGAAGATAAAGACCTGGGGATTAAGAAGGGACCACGTGCATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075552.7 |
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| CDS-3UTR CCA 90 bp | CCATGCACGTGGTCCCTTCTTAATCCCCAGGTCTTTATCTTCTCTCTTCACTCCGGGTCCAGGGTACTCTaGTTCTGCTTCACTTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: PCTWSLLNPQVFIFSLHSGSRVL*FCFTFC Trigger: ACAGAAAGTGAAGCAGAACCAGAGTACCCTGGACCC...GGAGTGAAGAGAGAAGATAAAGACCTGGGGATTAAGAAGGGACCACGTGCATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075552.7 |
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| CDS-3UTR CCA 90 bp | CCATGCACGTGGTCCCTTCTTAATCCCCAGGTCTTTATCTTCTCTCTTCACTCCCATAGAGCTGCCCTGTaGGTGAAGCAGCAAATTTGT | + |
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Preference number: 4 (lower is better) Translates to: PCTWSLLNPQVFIFSLHSHRAAL*VKQQIC Trigger: ACAAATTTGCTGCTTCACCCACAGGGCAGCTCTATG...GGAGTGAAGAGAGAAGATAAAGACCTGGGGATTAAGAAGGGACCACGTGCATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075552.7 |
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| CDS-3UTR CCA 90 bp | CATGCACGTGGTCCCTTCTTAATCCCCAGGTCTTTATCTTCTCTCTTCACTCCACGGTCAATCTCCTCATaGACCTTGGCCTCTACATCT | + |
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Preference number: 4 (lower is better) Translates to: HARGPFLIPRSLSSLFTPRSISS*TLASTS Trigger: AGATGTAGAGGCCAAGGTCCATGAGGAGATTGACCG...TGGAGTGAAGAGAGAAGATAAAGACCTGGGGATTAAGAAGGGACCACGTGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075552.7 |
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| CDS-3UTR TCA 90 bp | CGTGGTCCCTTCTTAATCCCCAGGTCTTTATCTTCTCTCTTCACTCCACCTTCCGCAGGTAATTTCCAATaGAAGGCAAAGGAATGGGTC | + |
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Preference number: 4 (lower is better) Translates to: RGPFLIPRSLSSLFTPPSAGNFQ*KAKEWV Trigger: GACCCATTCCTTTGCCTTTCATTGGAAATTACCTGC...GGAAGGTGGAGTGAAGAGAGAAGATAAAGACCTGGGGATTAAGAAGGGACCACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075552.7 |
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| CDS-3UTR CCA 90 bp | CCATGCACGTGGTCCCTTCTTAATCCCCAGGTCTTTATCTTCTCTCTTCACTCCGCTCATGGTGTACTTTaGTATGATCCTGGTAAACCC | + |
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Preference number: 4 (lower is better) Translates to: PCTWSLLNPQVFIFSLHSAHGVL*YDPGKP Trigger: GGGTTTACCAGGATCATACCAAAGTACACCATGAGC...GGAGTGAAGAGAGAAGATAAAGACCTGGGGATTAAGAAGGGACCACGTGCATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075552.7 |
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| CDS-3UTR TCA 90 bp | CATGCACGTGGTCCCTTCTTAATCCCCAGGTCTTTATCTTCTCTCTTCACTCCAGCAAATTTGTTCACTTaGCCCATCATCTGCAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: HARGPFLIPRSLSSLFTPANLFT*PIICSS Trigger: ACTGCTGCAGATGATGGGTCAAGTGAACAAATTTGC...TGGAGTGAAGAGAGAAGATAAAGACCTGGGGATTAAGAAGGGACCACGTGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075552.7 |
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| CDS-3UTR TCA 90 bp | AGTGTTTTCTATTTCTTCCATGCACGTGGTCCCTTCTTAATCCCCAGGTCTTTAATCGTAGTGTGGAGCTaGCTGTCTCAGACCCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: SVFYFFHARGPFLIPRSLIVVWS*LSQTQQ Trigger: TTGCTGGGTCTGAGACAGTCAGCTCCACACTACGAT...TAAAGACCTGGGGATTAAGAAGGGACCACGTGCATGGAAGAAATAGAAAACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075552.7 |
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| CDS-3UTR GCA 90 bp | CCATGCACGTGGTCCCTTCTTAATCCCCAGGTCTTTATCTTCTCTCTTCACTCCAGGGTACTCTGGTTCTaGTTCACTTTCTGTATCATG | + |
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Preference number: 4 (lower is better) Translates to: PCTWSLLNPQVFIFSLHSRVLWF*FTFCIM Trigger: CATGATACAGAAAGTGAAGCAGAACCAGAGTACCCT...GGAGTGAAGAGAGAAGATAAAGACCTGGGGATTAAGAAGGGACCACGTGCATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075552.7 |
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| CDS-3UTR CCA 90 bp | CATGCACGTGGTCCCTTCTTAATCCCCAGGTCTTTATCTTCTCTCTTCACTCCAGCTAGAGAAGAACTTTaGGTCTGTCATCAGAGAACC | + |
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Preference number: 4 (lower is better) Translates to: HARGPFLIPRSLSSLFTPAREEL*VCHQRT Trigger: GGTTCTCTGATGACAGACCCAAAGTTCTTCTCTAGC...TGGAGTGAAGAGAGAAGATAAAGACCTGGGGATTAAGAAGGGACCACGTGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075552.7 |
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| CDS-3UTR TCA 90 bp | TATTTCTTCCATGCACGTGGTCCCTTCTTAATCCCCAGGTCTTTATCTTCTCTCGCTCTTGGAGCTGTGTaGTGGAGCTGTATACATCTT | + |
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Preference number: 4 (lower is better) Translates to: YFFHARGPFLIPRSLSSLALGAV*WSCIHL Trigger: AAGATGTATACAGCTCCATCACACAGCTCCAAGAGC...GAGAGAAGATAAAGACCTGGGGATTAAGAAGGGACCACGTGCATGGAAGAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075552.7 |
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| CDS-3UTR TCA 90 bp | GTGAGTAGTGTTTTCTATTTCTTCCATGCACGTGGTCCCTTCTTAATCCCCAGGCCACCAAAGCCTCTTTaGCTGCATCGTATCCATAAA | + |
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Preference number: 4 (lower is better) Translates to: VSSVFYFFHARGPFLIPRPPKPL*LHRIHK Trigger: TTTATGGATACGATGCAGTCAAAGAGGCTTTGGTGG...CCTGGGGATTAAGAAGGGACCACGTGCATGGAAGAAATAGAAAACACTACTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075552.7 |
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| CDS-3UTR TCA 90 bp | GTGAGTAGTGTTTTCTATTTCTTCCATGCACGTGGTCCCTTCTTAATCCCCAGGGTTTCCTTGGGAACTTaGAACGGAAGTTCTGCAAGA | + |
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Preference number: 4 (lower is better) Translates to: VSSVFYFFHARGPFLIPRVSLGT*NGSSAR Trigger: TCTTGCAGAACTTCCGTTTCAAGTTCCCAAGGAAAC...CCTGGGGATTAAGAAGGGACCACGTGCATGGAAGAAATAGAAAACACTACTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075552.7 |
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| CDS-3UTR GCA 90 bp | CCATGCACGTGGTCCCTTCTTAATCCCCAGGTCTTTATCTTCTCTCTTCACTCCACATATTTCTCCTTTTaGATGTGGATGAGAAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: PCTWSLLNPQVFIFSLHSTYFSF*MWMRKE Trigger: CTCCTTTCTCATCCACATGCAAAAGGAGAAATATGT...GGAGTGAAGAGAGAAGATAAAGACCTGGGGATTAAGAAGGGACCACGTGCATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075552.7 |
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| CDS-3UTR CCA 90 bp | AGTGTTTTCTATTTCTTCCATGCACGTGGTCCCTTCTTAATCCCCAGGTCTTTAAGAATCGCTTCCCAGTaGAAAAGGGCAGAAAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: SVFYFFHARGPFLIPRSLRIASQ*KRAEKQ Trigger: CTGCTTTTCTGCCCTTTTCCACTGGGAAGCGATTCT...TAAAGACCTGGGGATTAAGAAGGGACCACGTGCATGGAAGAAATAGAAAACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000075552.7 |
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| CDS-3UTR TCA 90 bp | CATGCACGTGGTCCCTTCTTAATCCCCAGGTCTTTATCTTCTCTCTTCACTCCATCACTTTCTGTATCATaGAGTCTTCCAGTTTATGAG | + |
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Preference number: 4 (lower is better) Translates to: HARGPFLIPRSLSSLFTPSLSVS*SLPVYE Trigger: CTCATAAACTGGAAGACTTCATGATACAGAAAGTGA...TGGAGTGAAGAGAGAAGATAAAGACCTGGGGATTAAGAAGGGACCACGTGCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075552.7 |
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| CDS-3UTR CAA 90 bp | CCATGCACGTGGTCCCTTCTTAATCCCCAGGTCTTTATCTTCTCTCTTCACTCCAAGTCTCGTGGGGAATaGGGGTCCAGGGTACTCTGG | + |
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Preference number: 5 (lower is better) Translates to: PCTWSLLNPQVFIFSLHSKSRGE*GSRVLW Trigger: CCAGAGTACCCTGGACCCCAATTCCCCACGAGACTT...GGAGTGAAGAGAGAAGATAAAGACCTGGGGATTAAGAAGGGACCACGTGCATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075552.7 |
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| CDS-3UTR CAA 90 bp | CATGCACGTGGTCCCTTCTTAATCCCCAGGTCTTTATCTTCTCTCTTCACTCCAATGGAGCTAATGACATaGGAGGCTGTTTTGCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: HARGPFLIPRSLSSLFTPMELMT*EAVLLR Trigger: CCTGAGCAAAACAGCCTCCAATGTCATTAGCTCCAT...TGGAGTGAAGAGAGAAGATAAAGACCTGGGGATTAAGAAGGGACCACGTGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075552.7 |
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| CDS-3UTR CAA 90 bp | CATGCACGTGGTCCCTTCTTAATCCCCAGGTCTTTATCTTCTCTCTTCACTCCAAGTTTCCTTGGGAACTaGAAACGGAAGTTCTGCAAG | + |
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Preference number: 5 (lower is better) Translates to: HARGPFLIPRSLSSLFTPSFLGN*KRKFCK Trigger: CTTGCAGAACTTCCGTTTCAAGTTCCCAAGGAAACT...TGGAGTGAAGAGAGAAGATAAAGACCTGGGGATTAAGAAGGGACCACGTGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075552.7 |
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| CDS-3UTR CAA 90 bp | CGTGGTCCCTTCTTAATCCCCAGGTCTTTATCTTCTCTCTTCACTCCACCTTCCAACATATTTCTCCTTTaGCATGTGGATGAGAAAGGA | + |
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Preference number: 5 (lower is better) Translates to: RGPFLIPRSLSSLFTPPSNIFLL*HVDEKG Trigger: TCCTTTCTCATCCACATGCAAAAGGAGAAATATGTT...GGAAGGTGGAGTGAAGAGAGAAGATAAAGACCTGGGGATTAAGAAGGGACCACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075552.7 |
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| CDS CAA 90 bp | GGGTCTGTCATCAGAGAACCCAGTATAGGAAACACTTCAGTGCCCTaGGGGAGGAAGAAGCCACGGAAGGAAGTATCCTTGGTAATCCTT | + |
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Preference number: 6 (lower is better) Translates to: GSVIREPSIGNTSVP*GRKKPRKEVSLVIL Trigger: AAGGATTACCAAGGATACTTCCTTCCGTGGCTTCTTCCTCCCCAAGGGCACTGAAGTGTTTCCTATACTGGGTTCTCTGATGACAGACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075552.7 |
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| CDS GCA 72 bp | TCAATCTCCTCATGGACCTTGGCCTCTACATCTGGATaGTTCATTAGTAGCAGGAAGCCATATCGTAGTGTG | + |
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Preference number: 6 (lower is better) Translates to: SISSWTLASTSG*FISSRKPYRSV Trigger: CACACTACGATATGGCTTCCTGCTACTAATGAAGCATCCAGATGTAGAGGCCAAGGTCCATGAGGAGATTGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075552.7 |
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| CDS CCA 72 bp | CTGTGGGTTGAAGTCTTTGGGGCTAGAGAAGAACTTTaGGTCTGTCATCAGAGAACCCAGTATAGGAAACAC | + |
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Preference number: 6 (lower is better) Translates to: LWVEVFGAREEL*VCHQRTQYRKH Trigger: GTGTTTCCTATACTGGGTTCTCTGATGACAGACCCAAAGTTCTTCTCTAGCCCCAAAGACTTCAACCCACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075552.7 |
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| CDS CAA 72 bp | ATGATCCTGGTAAACCCCTCTGGTGTAGGGGACTCATaGATATCTTCTAGTTTCCTTGGGAACTTGAAACGG | + |
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Preference number: 6 (lower is better) Translates to: MILVNPSGVGDS*ISSSFLGNLKR Trigger: CCGTTTCAAGTTCCCAAGGAAACTAGAAGATATCAATGAGTCCCCTACACCAGAGGGGTTTACCAGGATCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075552.7 |
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