Pregenerated sensors for CYP27B1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006724Ensembl transcript IDs: ENSMUST00000165764.8, ENSMUST00000172069.2
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACGGACCACGTTGTCCAGAGTTCCAGCATAGCCCGCGGCTGCTTGTaGCCGGAGGAGGAGCGGGGCCAGAAGACTTCGGAGCCTCTGCCA | + |
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Preference number: 1 (lower is better) Translates to: TDHVVQSSSIARGCL*PEEERGQKTSEPLP Trigger: TGGCAGAGGCTCCGAAGTCTTCTGGCCCCGCTCCTCCTCCGGCCACAAGCAGCCGCGGGCTATGCTGGAACTCTGGACAACGTGGTCCGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
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| 3UTR CCA 90 bp | GCCACGTCCAGAACTAGGCCGGGTAGCCCAGAGCCACGTCCCCGCTaGCGCCTTAGTCGTCGCACAAGGTCACGGACCACGTTGTCCAGA | + |
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Preference number: 1 (lower is better) Translates to: ATSRTRPGSPEPRPR*RLSRRTRSRTTLSR Trigger: TCTGGACAACGTGGTCCGTGACCTTGTGCGACGACTAAGGCGCCAGCGGGGACGTGGCTCTGGGCTACCCGGCCTAGTTCTGGACGTGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
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| 3UTR GCA 90 bp | AAGGTCACGGACCACGTTGTCCAGAGTTCCAGCATAGCCCGCGGCTaGTTGTGGCCGGAGGAGGAGCGGGGCCAGAAGACTTCGGAGCCT | + |
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Preference number: 1 (lower is better) Translates to: KVTDHVVQSSSIARG*LWPEEERGQKTSEP Trigger: AGGCTCCGAAGTCTTCTGGCCCCGCTCCTCCTCCGGCCACAAGCAGCCGCGGGCTATGCTGGAACTCTGGACAACGTGGTCCGTGACCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
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| 3UTR CCA 90 bp | ACAGCCTTTAACAGGGGCAGCTGGGACAGAGCAGTGCCATGGGGGTaGGCACAGGAGCCACGGGTCCCAGCTGTGATCTCAGAGTGGAGT | + |
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Preference number: 1 (lower is better) Translates to: TAFNRGSWDRAVPWG*AQEPRVPAVISEWS Trigger: ACTCCACTCTGAGATCACAGCTGGGACCCGTGGCTCCTGTGCCCACCCCCATGGCACTGCTCTGTCCCAGCTGCCCCTGTTAAAGGCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
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| 3UTR TCA 90 bp | TCACCTTCTCGCAGCTCCACGTGCCTCTGGGCAAAGGCAAACATCTaGTCCCAGTCTCGGCAGAGGCGGGCCCAGGGTCCAGGTATAAGG | + |
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Preference number: 1 (lower is better) Translates to: SPSRSSTCLWAKANI*SQSRQRRAQGPGIR Trigger: CCTTATACCTGGACCCTGGGCCCGCCTCTGCCGAGACTGGGATCAGATGTTTGCCTTTGCCCAGAGGCACGTGGAGCTGCGAGAAGGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
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| 3UTR CCA 90 bp | TTGATCACAGCCTTTAACAGGGGCAGCTGGGACAGAGCAGTGCCATaGGGGTGGGCACAGGAGCCACGGGTCCCAGCTGTGATCTCAGAG | + |
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Preference number: 1 (lower is better) Translates to: LITAFNRGSWDRAVP*GWAQEPRVPAVISE Trigger: CTCTGAGATCACAGCTGGGACCCGTGGCTCCTGTGCCCACCCCCATGGCACTGCTCTGTCCCAGCTGCCCCTGTTAAAGGCTGTGATCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
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| 3UTR GCA 90 bp | TCCCAGTCTCGGCAGAGGCGGGCCCAGGGTCCAGGTATAAGGTGGTaGAACCAGTTGGGCATCGCCATGGTCAAGAGTGTAGACACAAAC | + |
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Preference number: 1 (lower is better) Translates to: SQSRQRRAQGPGIRW*NQLGIAMVKSVDTN Trigger: GTTTGTGTCTACACTCTTGACCATGGCGATGCCCAACTGGTTGCACCACCTTATACCTGGACCCTGGGCCCGCCTCTGCCGAGACTGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
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| 3UTR GCA 90 bp | GGGACAAAGCCATTTGTAGCTCAAGCTCTGCCAAGCGTCTCCCGATaGAGCTCCGTTTGCCAAAGCCGAAGGGAAGAGATGCAAATGGGT | + |
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Preference number: 1 (lower is better) Translates to: GTKPFVAQALPSVSR*SSVCQSRREEMQMG Trigger: ACCCATTTGCATCTCTTCCCTTCGGCTTTGGCAAACGGAGCTGCATCGGGAGACGCTTGGCAGAGCTTGAGCTACAAATGGCTTTGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
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| 3UTR TCA 90 bp | TCCCTAGAGGAAAGATTAAGAGAGAAAAGGGTGGGCAGAGCCTGGTaGGTGGACGATCCTGCCACATGGTCCAGGTTCAGTCTGAGAATG | + |
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Preference number: 1 (lower is better) Translates to: SLEERLREKRVGRAW*VDDPATWSRFSLRM Trigger: CATTCTCAGACTGAACCTGGACCATGTGGCAGGATCGTCCACTCACCAGGCTCTGCCCACCCTTTTCTCTCTTAATCTTTCCTCTAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165764.8 ENSMUST00000172069.2 |
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| 3UTR TCA 90 bp | ATGGACTGGACAGACACCTTTTCCCGAAAAAGGAAGTGGGTTAAGTaGTGCCCAGACGGCATATCCTCCTCAGGCTTTCCCTGGTTCCTC | + |
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Preference number: 1 (lower is better) Translates to: MDWTDTFSRKRKWVK*CPDGISSSGFPWFL Trigger: GAGGAACCAGGGAAAGCCTGAGGAGGATATGCCGTCTGGGCATCACTTAACCCACTTCCTTTTTCGGGAAAAGGTGTCTGTCCAGTCCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
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| 3UTR TCA 90 bp | CAACCAGTTGGGCATCGCCATGGTCAAGAGTGTAGACACAAACACTaGGCCCACTGCATGTATGAAGGTTTCTGTGTCAGGAGGGACTTC | + |
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Preference number: 1 (lower is better) Translates to: QPVGHRHGQECRHKH*AHCMYEGFCVRRDF Trigger: GAAGTCCCTCCTGACACAGAAACCTTCATACATGCAGTGGGCTCAGTGTTTGTGTCTACACTCTTGACCATGGCGATGCCCAACTGGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
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| 3UTR GCA 90 bp | CCAGGTGCAGACCAGATGCAATCACTTAGCTTGTGCCGTGATAAATaGTTAGACAGAGCATCAACGAACACTACAGGATCAGGGGCGAAT | + |
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Preference number: 1 (lower is better) Translates to: PGADQMQSLSLCRDK*LDRASTNTTGSGAN Trigger: ATTCGCCCCTGATCCTGTAGTGTTCGTTGATGCTCTGTCTAAGCATTTATCACGGCACAAGCTAAGTGATTGCATCTGGTCTGCACCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165764.8 ENSMUST00000172069.2 |
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| 3UTR CCA 90 bp | CGTATCTTGGGGAATTACATAGTTTCCTACACGGATGTCTCTGTCTaGGACACGGGAATTCCCAGGTACCACAGGGTACAATCTCAACAC | + |
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Preference number: 1 (lower is better) Translates to: RILGNYIVSYTDVSV*DTGIPRYHRVQSQH Trigger: GTGTTGAGATTGTACCCTGTGGTACCTGGGAATTCCCGTGTCCCAGACAGAGACATCCGTGTAGGAAACTATGTAATTCCCCAAGATACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
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| 3UTR CAA 90 bp | GTCACGGACCACGTTGTCCAGAGTTCCAGCATAGCCCGCGGCTGCTaGTGGCCGGAGGAGGAGCGGGGCCAGAAGACTTCGGAGCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: VTDHVVQSSSIARGC*WPEEERGQKTSEPL Trigger: CAGAGGCTCCGAAGTCTTCTGGCCCCGCTCCTCCTCCGGCCACAAGCAGCCGCGGGCTATGCTGGAACTCTGGACAACGTGGTCCGTGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
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| 3UTR CAA 90 bp | CGGCAGAGGCGGGCCCAGGGTCCAGGTATAAGGTGGTGCAACCAGTaGGGCATCGCCATGGTCAAGAGTGTAGACACAAACACTGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: RQRRAQGPGIRWCNQ*GIAMVKSVDTNTEP Trigger: GGGCTCAGTGTTTGTGTCTACACTCTTGACCATGGCGATGCCCAACTGGTTGCACCACCTTATACCTGGACCCTGGGCCCGCCTCTGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGCTGAGTCAGGCCAAGTACACATAGGTCAGGACCTGCTTCCTGGAGTTTGCGCTGGGACAGAGCAGTaGCATGGGGGTGGGCACAGG | + |
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Preference number: 2 (lower is better) Translates to: PAESGQVHIGQDLLPGVCAGTEQ*HGGGHR Trigger: CCTGTGCCCACCCCCATGGCACTGCTCTGTCCCAGC...GCAAACTCCAGGAAGCAGGTCCTGACCTATGTGTACTTGGCCTGACTCAGCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
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| 3UTR-3UTR TCA 90 bp | GGAAGGAGAAAGATGGTGGTTCTGCGATGCCTGCTGAGTCAGGCCAAGTACACAGTGGGCAGAGCCTGGTaGGTGGACGATCCTGCCACA | + |
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Preference number: 2 (lower is better) Translates to: GRRKMVVLRCLLSQAKYTVGRAW*VDDPAT Trigger: TGTGGCAGGATCGTCCACTCACCAGGCTCTGCCCAC...TGTGTACTTGGCCTGACTCAGCAGGCATCGCAGAACCACCATCTTTCTCCTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165764.8 ENSMUST00000172069.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGCTGAGTCAGGCCAAGTACACATAGGTCAGGACCTGCTTCCTGGAGTTTGCCACGGGTCCCAGCTGTaGTCTCAGAGTGGAGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: PAESGQVHIGQDLLPGVCHGSQL*SQSGVQ Trigger: CTGCACTCCACTCTGAGATCACAGCTGGGACCCGTG...GCAAACTCCAGGAAGCAGGTCCTGACCTATGTGTACTTGGCCTGACTCAGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
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| 3UTR-3UTR GCA 90 bp | AGCTCAAGCTCTGCCAAGCGTCTCCCGATGCAGCTCCGTTTGCCAAAGCCGAAGAGACTTCGGAGCCTCTaGCATTCTTCACCATCCGCC | + |
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Preference number: 2 (lower is better) Translates to: SSSSAKRLPMQLRLPKPKRLRSL*HSSPSA Trigger: GGCGGATGGTGAAGAATGGCAGAGGCTCCGAAGTCT...CTTCGGCTTTGGCAAACGGAGCTGCATCGGGAGACGCTTGGCAGAGCTTGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
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| 3UTR-3UTR CCA 90 bp | GCGAATCCCTCCCCAGGCTGCCTGGAGTTGGTAGTTAACCCCTGCGTTGGCACTCAGGAAGGAGAAAGATaGTGGTTCTGCGATGCCTGC | + |
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Preference number: 2 (lower is better) Translates to: ANPSPGCLELVVNPCVGTQEGER*WFCDAC Trigger: GCAGGCATCGCAGAACCACCATCTTTCTCCTTCCTG...AGTGCCAACGCAGGGGTTAACTACCAACTCCAGGCAGCCTGGGGAGGGATTCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165764.8 ENSMUST00000172069.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGCTCAAGCTCTGCCAAGCGTCTCCCGATGCAGCTCCGTTTGCCAAAGCCGAGATCAGGAGAGGCACTaGGCAGGAAGGAGAAAGATG | + |
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Preference number: 2 (lower is better) Translates to: VAQALPSVSRCSSVCQSRDQERH*AGRRKM Trigger: CATCTTTCTCCTTCCTGCTCAGTGCCTCTCCTGATC...TCGGCTTTGGCAAACGGAGCTGCATCGGGAGACGCTTGGCAGAGCTTGAGCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGCTGAGTCAGGCCAAGTACACATAGGTCAGGACCTGCTTCCTGGAGTTTGCTCTCGCAGCTCCACGTaGCTCTGGGCAAAGGCAAAC | + |
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Preference number: 2 (lower is better) Translates to: PAESGQVHIGQDLLPGVCSRSST*LWAKAN Trigger: GTTTGCCTTTGCCCAGAGGCACGTGGAGCTGCGAGA...GCAAACTCCAGGAAGCAGGTCCTGACCTATGTGTACTTGGCCTGACTCAGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGCTGAGTCAGGCCAAGTACACATAGGTCAGGACCTGCTTCCTGGAGTTTGCCCAGGTATAAGGTGGTaGAACCAGTTGGGCATCGCC | + |
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Preference number: 2 (lower is better) Translates to: PAESGQVHIGQDLLPGVCPGIRW*NQLGIA Trigger: GGCGATGCCCAACTGGTTGCACCACCTTATACCTGG...GCAAACTCCAGGAAGCAGGTCCTGACCTATGTGTACTTGGCCTGACTCAGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAGGCACACATGGTCAGGTAGAGATGCAGCCAGGTGCAGACCAGATGCAATCGCAGAGCCTGGTGAGTaGACGATCCTGCCACATGGT | + |
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Preference number: 2 (lower is better) Translates to: RRHTWSGRDAARCRPDAIAEPGE*TILPHG Trigger: ACCATGTGGCAGGATCGTCCACTCACCAGGCTCTGC...GATTGCATCTGGTCTGCACCTGGCTGCATCTCTACCTGACCATGTGTGCCTTCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165764.8 ENSMUST00000172069.2 |
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| 3UTR-3UTR CCA 90 bp | AGTAGCTCTGTCACATTCCCCACTATGGACTGGACAGACACCTTTTCCCGAAAAGAGCCACGTCCCCGCTaGCGCCTTAGTCGTCGCACA | + |
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Preference number: 2 (lower is better) Translates to: SSSVTFPTMDWTDTFSRKEPRPR*RLSRRT Trigger: TGTGCGACGACTAAGGCGCCAGCGGGGACGTGGCTC...TTTTCGGGAAAAGGTGTCTGTCCAGTCCATAGTGGGGAATGTGACAGAGCTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGGGACAAAGCCATTTGTAGCTCAAGCTCTGCCAAGCGTCTCCCGATGCAGCGGTGGTGCAACCAGTTaGGCATCGCCATGGTCAAGA | + |
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Preference number: 2 (lower is better) Translates to: SGTKPFVAQALPSVSRCSGGATS*ASPWSR Trigger: TCTTGACCATGGCGATGCCCAACTGGTTGCACCACC...GCTGCATCGGGAGACGCTTGGCAGAGCTTGAGCTACAAATGGCTTTGTCCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGGCACACATGGTCAGGTAGAGATGCAGCCAGGTGCAGACCAGATGCAATCAGACCCCATCCTGTCTTaGGAGAGACGATGTTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: EGTHGQVEMQPGADQMQSDPILS*ERRCWL Trigger: CAGCCAACATCGTCTCTCTCAAGACAGGATGGGGTC...TGATTGCATCTGGTCTGCACCTGGCTGCATCTCTACCTGACCATGTGTGCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165764.8 ENSMUST00000172069.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGAAACTGTGTGGGGTCCCTTGAAGTGGCATAGTGACATAGGGAGACTAGCGGCAAAGGCAAACATCTaGTCCCAGTCTCGGCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: LETVWGPLKWHSDIGRLAAKANI*SQSRQR Trigger: CCTCTGCCGAGACTGGGATCAGATGTTTGCCTTTGC...CGCTAGTCTCCCTATGTCACTATGCCACTTCAAGGGACCCCACACAGTTTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGCTGAGTCAGGCCAAGTACACATAGGTCAGGACCTGCTTCCTGGAGTTTGCAATCCCTCCCCAGGCTaGCTGGAGTTGGTAGTTAAC | + |
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Preference number: 2 (lower is better) Translates to: PAESGQVHIGQDLLPGVCNPSPG*LELVVN Trigger: GTTAACTACCAACTCCAGGCAGCCTGGGGAGGGATT...GCAAACTCCAGGAAGCAGGTCCTGACCTATGTGTACTTGGCCTGACTCAGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165764.8 ENSMUST00000172069.2 |
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| 3UTR-3UTR CCA 90 bp | GTAGCTCAAGCTCTGCCAAGCGTCTCCCGATGCAGCTCCGTTTGCCAAAGCCGAGGGCAGGCCAAAAGATaGATGATAAGAAGTGGATCC | + |
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Preference number: 2 (lower is better) Translates to: VAQALPSVSRCSSVCQSRGQAKR*MIRSGS Trigger: GGATCCACTTCTTATCATCCATCTTTTGGCCTGCCC...TCGGCTTTGGCAAACGGAGCTGCATCGGGAGACGCTTGGCAGAGCTTGAGCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGGCACACATGGTCAGGTAGAGATGCAGCCAGGTGCAGACCAGATGCAATCAGAAGGCATTGGATCCTaGGGAATGATCAGGAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: EGTHGQVEMQPGADQMQSEGIGS*GMIRRG Trigger: GCCTCTCCTGATCATTCCTCAGGATCCAATGCCTTC...TGATTGCATCTGGTCTGCACCTGGCTGCATCTCTACCTGACCATGTGTGCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165764.8 ENSMUST00000172069.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGGCACACATGGTCAGGTAGAGATGCAGCCAGGTGCAGACCAGATGCAATCAAATCCCTCCCCAGGCTaGCTGGAGTTGGTAGTTAAC | + |
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Preference number: 2 (lower is better) Translates to: EGTHGQVEMQPGADQMQSNPSPG*LELVVN Trigger: GTTAACTACCAACTCCAGGCAGCCTGGGGAGGGATT...TGATTGCATCTGGTCTGCACCTGGCTGCATCTCTACCTGACCATGTGTGCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165764.8 ENSMUST00000172069.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAGGCACACATGGTCAGGTAGAGATGCAGCCAGGTGCAGACCAGATGCAATCGGTCTGGAAACTGTGTaGGGTCCCTTGAAGTGGCAT | + |
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Preference number: 2 (lower is better) Translates to: RRHTWSGRDAARCRPDAIGLETV*GPLKWH Trigger: ATGCCACTTCAAGGGACCCCACACAGTTTCCAGACC...GATTGCATCTGGTCTGCACCTGGCTGCATCTCTACCTGACCATGTGTGCCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGAGATGCAGCCAGGTGCAGACCAGATGCAATCACTTAGCTTGTGCCGTGATTTGGATCCTGAGGAATaGTCAGGAGAGGCACTGAGC | + |
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Preference number: 2 (lower is better) Translates to: VEMQPGADQMQSLSLCRDLDPEE*SGEALS Trigger: GCTCAGTGCCTCTCCTGATCATTCCTCAGGATCCAA...ATCACGGCACAAGCTAAGTGATTGCATCTGGTCTGCACCTGGCTGCATCTCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165764.8 ENSMUST00000172069.2 |
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| 3UTR-3UTR GCA 90 bp | GGAAGGAGAAAGATGGTGGTTCTGCGATGCCTGCTGAGTCAGGCCAAGTACACAAGAGATGCAGCCAGGTaGAGACCAGATGCAATCACT | + |
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Preference number: 2 (lower is better) Translates to: GRRKMVVLRCLLSQAKYTRDAAR*RPDAIT Trigger: AGTGATTGCATCTGGTCTGCACCTGGCTGCATCTCT...TGTGTACTTGGCCTGACTCAGCAGGCATCGCAGAACCACCATCTTTCTCCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165764.8 ENSMUST00000172069.2 |
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| 3UTR-3UTR GCA 90 bp | GGATGTCTCTGTCTGGGACACGGGAATTCCCAGGTACCACAGGGTACAATCTCAAGAGATGCAGCCAGGTaGAGACCAGATGCAATCACT | + |
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Preference number: 2 (lower is better) Translates to: GCLCLGHGNSQVPQGTISRDAAR*RPDAIT Trigger: AGTGATTGCATCTGGTCTGCACCTGGCTGCATCTCT...TGAGATTGTACCCTGTGGTACCTGGGAATTCCCGTGTCCCAGACAGAGACATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
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| 3UTR-3UTR GCA 90 bp | GAGATGCAGCCAGGTGCAGACCAGATGCAATCACTTAGCTTGTGCCGTGATAAAGTGAGTGGACGATCCTaGCACATGGTCCAGGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: EMQPGADQMQSLSLCRDKVSGRS*HMVQVQ Trigger: CTGAACCTGGACCATGTGGCAGGATCGTCCACTCAC...TTTATCACGGCACAAGCTAAGTGATTGCATCTGGTCTGCACCTGGCTGCATCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165764.8 ENSMUST00000172069.2 |
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| 3UTR-3UTR CCA 90 bp | GTAGAGATGCAGCCAGGTGCAGACCAGATGCAATCACTTAGCTTGTGCCGTGATTCAGGACCTGCTTCCTaGAGTTTGCTCGGTCAGACA | + |
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Preference number: 2 (lower is better) Translates to: VEMQPGADQMQSLSLCRDSGPAS*SLLGQT Trigger: TGTCTGACCGAGCAAACTCCAGGAAGCAGGTCCTGA...ATCACGGCACAAGCTAAGTGATTGCATCTGGTCTGCACCTGGCTGCATCTCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165764.8 ENSMUST00000172069.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGGCACACATGGTCAGGTAGAGATGCAGCCAGGTGCAGACCAGATGCAATCAGGTCCAGGTTCAGTCTaGGAATGTATGGTGCTGAAT | + |
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Preference number: 2 (lower is better) Translates to: EGTHGQVEMQPGADQMQSGPGSV*ECMVLN Trigger: ATTCAGCACCATACATTCTCAGACTGAACCTGGACC...TGATTGCATCTGGTCTGCACCTGGCTGCATCTCTACCTGACCATGTGTGCCTTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165764.8 ENSMUST00000172069.2 |
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| 3UTR CAA 90 bp | GATGTTGGCTGTCTTCCGAATGGTTATCTATCTACAAACTGTAGATaGATGCTCCTCTCAGGGACCAGGACAGTCCGGGTCATGGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: DVGCLPNGYLSTNCR*MLLSGTRTVRVMGL Trigger: CAAGCCCATGACCCGGACTGTCCTGGTCCCTGAGAGGAGCATCAATCTACAGTTTGTAGATAGATAACCATTCGGAAGACAGCCAACATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
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| 3UTR-3UTR TCA 90 bp | CCCAGTAGACTAGTCATTACTCTTCTCAGAAGGCACACATGGTCAGGTAGAGATGACCCCATCCTGTCTTaGGAGAGACGATGTTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: PSRLVITLLRRHTWSGRDDPILS*ERRCWL Trigger: CAGCCAACATCGTCTCTCTCAAGACAGGATGGGGTC...ATCTCTACCTGACCATGTGTGCCTTCTGAGAAGAGTAATGACTAGTCTACTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165764.8 ENSMUST00000172069.2 |
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| 3UTR-3UTR CCA 90 bp | CAGACACCTTTTCCCGAAAAAGGAAGTGGGTTAAGTGATGCCCAGACGGCATATCAGGAAGGAGAAAGATaGTGGTTCTGCGATGCCTGC | + |
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Preference number: 2 (lower is better) Translates to: QTPFPEKGSGLSDAQTAYQEGER*WFCDAC Trigger: GCAGGCATCGCAGAACCACCATCTTTCTCCTTCCTG...ATATGCCGTCTGGGCATCACTTAACCCACTTCCTTTTTCGGGAAAAGGTGTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
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| 3UTR-3UTR TCA 90 bp | ATAGGAAGAGCACCTGGCTCAGGTAGCACTTCAAAATGGGTCAAGATCTGGGACGGTCCAGGTTCAGTCTaGGAATGTATGGTGCTGAAT | + |
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Preference number: 2 (lower is better) Translates to: IGRAPGSGSTSKWVKIWDGPGSV*ECMVLN Trigger: ATTCAGCACCATACATTCTCAGACTGAACCTGGACC...GTCCCAGATCTTGACCCATTTTGAAGTGCTACCTGAGCCAGGTGCTCTTCCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGGCACACATGGTCAGGTAGAGATGCAGCCAGGTGCAGACCAGATGCAATCAATCTCAACACTTCTTTaGTCACAGCCTTTAACAGGG | + |
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Preference number: 2 (lower is better) Translates to: EGTHGQVEMQPGADQMQSISTLL*SQPLTG Trigger: CCCTGTTAAAGGCTGTGATCAAAGAAGTGTTGAGAT...TGATTGCATCTGGTCTGCACCTGGCTGCATCTCTACCTGACCATGTGTGCCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
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| 3UTR-3UTR CCA 90 bp | CCCAGTAGACTAGTCATTACTCTTCTCAGAAGGCACACATGGTCAGGTAGAGATTCAGGACCTGCTTCCTaGAGTTTGCTCGGTCAGACA | + |
|
Preference number: 2 (lower is better) Translates to: PSRLVITLLRRHTWSGRDSGPAS*SLLGQT Trigger: TGTCTGACCGAGCAAACTCCAGGAAGCAGGTCCTGA...ATCTCTACCTGACCATGTGTGCCTTCTGAGAAGAGTAATGACTAGTCTACTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165764.8 ENSMUST00000172069.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTAAATTAGGCAAGGGCAGATTTACTTCCCTAGAGGAAAGATTAAGAGAGAAAGAGTGGAGTGCAGTCTaGACATCGGGGTGCCGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: CKLGKGRFTSLEERLREKEWSAV*TSGCRE Trigger: TTCCCGGCACCCCGATGTCCAGACTGCACTCCACTC...TTTCTCTCTTAATCTTTCCTCTAGGGAAGTAAATCTGCCCTTGCCTAATTTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
||
| 3UTR CCA 72 bp | AGAACTAGGCCGGGTAGCCCAGAGCCACGTCCCCGCTaGCGCCTTAGTCGTCGCACAAGGTCACGGACCACG | + |
|
Preference number: 3 (lower is better) Translates to: RTRPGSPEPRPR*RLSRRTRSRTT Trigger: CGTGGTCCGTGACCTTGTGCGACGACTAAGGCGCCAGCGGGGACGTGGCTCTGGGCTACCCGGCCTAGTTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
||
| 3UTR TCA 72 bp | CGCAGCTCCACGTGCCTCTGGGCAAAGGCAAACATCTaGTCCCAGTCTCGGCAGAGGCGGGCCCAGGGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: RSSTCLWAKANI*SQSRQRRAQGP Trigger: TGGACCCTGGGCCCGCCTCTGCCGAGACTGGGATCAGATGTTTGCCTTTGCCCAGAGGCACGTGGAGCTGCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
||
| 3UTR CCA 72 bp | GTTGTCCAGAGTTCCAGCATAGCCCGCGGCTGCTTGTaGCCGGAGGAGGAGCGGGGCCAGAAGACTTCGGAG | + |
|
Preference number: 3 (lower is better) Translates to: VVQSSSIARGCL*PEEERGQKTSE Trigger: CTCCGAAGTCTTCTGGCCCCGCTCCTCCTCCGGCCACAAGCAGCCGCGGGCTATGCTGGAACTCTGGACAAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
||
| 3UTR GCA 72 bp | CGGCAGAGGCGGGCCCAGGGTCCAGGTATAAGGTGGTaGAACCAGTTGGGCATCGCCATGGTCAAGAGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: RQRRAQGPGIRW*NQLGIAMVKSV Trigger: TACACTCTTGACCATGGCGATGCCCAACTGGTTGCACCACCTTATACCTGGACCCTGGGCCCGCCTCTGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
||
| 3UTR CCA 72 bp | TCTCGGCAGAGGCGGGCCCAGGGTCCAGGTATAAGGTaGTGCAACCAGTTGGGCATCGCCATGGTCAAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: SRQRRAQGPGIR*CNQLGIAMVKS Trigger: ACTCTTGACCATGGCGATGCCCAACTGGTTGCACCACCTTATACCTGGACCCTGGGCCCGCCTCTGCCGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGACACCTTTTCCCGAAAAAGGAAGTGGGTTAAGTGATGCCCAGACGGCATATATAGCCCGCGGCTGCTaGTGGCCGGAGGAGGAGCGG | + |
|
Preference number: 3 (lower is better) Translates to: QTPFPEKGSGLSDAQTAYIARGC*WPEEER Trigger: CCGCTCCTCCTCCGGCCACAAGCAGCCGCGGGCTAT...ATATGCCGTCTGGGCATCACTTAACCCACTTCCTTTTTCGGGAAAAGGTGTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
||
| 3UTR GCA 72 bp | CAAGCTCTGCCAAGCGTCTCCCGATGCAGCTCCGTTTaGCAAAGCCGAAGGGAAGAGATGCAAATGGGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: QALPSVSRCSSV*QSRREEMQMGG Trigger: CCCACCCATTTGCATCTCTTCCCTTCGGCTTTGGCAAACGGAGCTGCATCGGGAGACGCTTGGCAGAGCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
||
| 3UTR CCA 72 bp | GTCAGGCCAAGTACACATAGGTCAGGACCTGCTTCCTaGAGTTTGCTCGGTCAGACAGGCCTCCAAGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: VRPSTHRSGPAS*SLLGQTGLQGE Trigger: CTCTCCTTGGAGGCCTGTCTGACCGAGCAAACTCCAGGAAGCAGGTCCTGACCTATGTGTACTTGGCCTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165764.8 ENSMUST00000172069.2 |
||
| 3UTR GCA 72 bp | CAAGTACACATAGGTCAGGACCTGCTTCCTGGAGTTTaGTCGGTCAGACAGGCCTCCAAGGAGAGTGTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: QVHIGQDLLPGV*SVRQASKESVP Trigger: AGGCACACTCTCCTTGGAGGCCTGTCTGACCGAGCAAACTCCAGGAAGCAGGTCCTGACCTATGTGTACTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165764.8 ENSMUST00000172069.2 |
||
| 3UTR GCA 72 bp | GAAAAGGGTGGGCAGAGCCTGGTGAGTGGACGATCCTaGCACATGGTCCAGGTTCAGTCTGAGAATGTATGG | + |
|
Preference number: 3 (lower is better) Translates to: EKGGQSLVSGRS*HMVQVQSENVW Trigger: CCATACATTCTCAGACTGAACCTGGACCATGTGGCAGGATCGTCCACTCACCAGGCTCTGCCCACCCTTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165764.8 ENSMUST00000172069.2 |
||
| 3UTR GCA 72 bp | CCATTTGTAGCTCAAGCTCTGCCAAGCGTCTCCCGATaGAGCTCCGTTTGCCAAAGCCGAAGGGAAGAGATG | + |
|
Preference number: 3 (lower is better) Translates to: PFVAQALPSVSR*SSVCQSRREEM Trigger: CATCTCTTCCCTTCGGCTTTGGCAAACGGAGCTGCATCGGGAGACGCTTGGCAGAGCTTGAGCTACAAATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTGCGATGCCTGCTGAGTCAGGCCAAGTACACATAGGTCAGGACCTGCTTCCTAGACCCCATCCTGTCTaGAGAGAGACGATGTTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: SAMPAESGQVHIGQDLLPRPHPV*RETMLA Trigger: AGCCAACATCGTCTCTCTCAAGACAGGATGGGGTCT...AGGAAGCAGGTCCTGACCTATGTGTACTTGGCCTGACTCAGCAGGCATCGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165764.8 ENSMUST00000172069.2 |
||
| 3UTR TCA 72 bp | CAGGAAGGAGAAAGATGGTGGTTCTGCGATGCCTGCTaGGTCAGGCCAAGTACACATAGGTCAGGACCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: QEGERWWFCDAC*VRPSTHRSGPA Trigger: AGCAGGTCCTGACCTATGTGTACTTGGCCTGACTCAGCAGGCATCGCAGAACCACCATCTTTCTCCTTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165764.8 ENSMUST00000172069.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTCAGGTAGAGATGCAGCCAGGTGCAGACCAGATGCAATCACTTAGCTTGTGCAGACCCCATCCTGTCTaGAGAGAGACGATGTTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: GQVEMQPGADQMQSLSLCRPHPV*RETMLA Trigger: AGCCAACATCGTCTCTCTCAAGACAGGATGGGGTCT...GCACAAGCTAAGTGATTGCATCTGGTCTGCACCTGGCTGCATCTCTACCTGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165764.8 ENSMUST00000172069.2 |
||
| 3UTR TCA 72 bp | GAAAGATTAAGAGAGAAAAGGGTGGGCAGAGCCTGGTaGGTGGACGATCCTGCCACATGGTCCAGGTTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: ERLREKRVGRAW*VDDPATWSRFS Trigger: ACTGAACCTGGACCATGTGGCAGGATCGTCCACTCACCAGGCTCTGCCCACCCTTTTCTCTCTTAATCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165764.8 ENSMUST00000172069.2 |
||
| 3UTR CCA 72 bp | AGTTGGGGTCTGGAAACTGTGTGGGGTCCCTTGAAGTaGCATAGTGACATAGGGAGACTAGCGTATCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: SWGLETVWGPLK*HSDIGRLAYLG Trigger: CCCAAGATACGCTAGTCTCCCTATGTCACTATGCCACTTCAAGGGACCCCACACAGTTTCCAGACCCCAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTGCGATGCCTGCTGAGTCAGGCCAAGTACACATAGGTCAGGACCTGCTTCCTAGGAGAGTGTGCCTCTaGTGTATAACAAAGACCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SAMPAESGQVHIGQDLLPRRVCL*CITKTP Trigger: TGGGGTCTTTGTTATACACAAGAGGCACACTCTCCT...AGGAAGCAGGTCCTGACCTATGTGTACTTGGCCTGACTCAGCAGGCATCGCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165764.8 ENSMUST00000172069.2 |
||
| 3UTR TCA 72 bp | GGGCATCGCCATGGTCAAGAGTGTAGACACAAACACTaGGCCCACTGCATGTATGAAGGTTTCTGTGTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: GHRHGQECRHKH*AHCMYEGFCVR Trigger: CCTGACACAGAAACCTTCATACATGCAGTGGGCTCAGTGTTTGTGTCTACACTCTTGACCATGGCGATGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
||
| 3UTR TCA 72 bp | ACAGACACCTTTTCCCGAAAAAGGAAGTGGGTTAAGTaGTGCCCAGACGGCATATCCTCCTCAGGCTTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: TDTFSRKRKWVK*CPDGISSSGFP Trigger: GGGAAAGCCTGAGGAGGATATGCCGTCTGGGCATCACTTAACCCACTTCCTTTTTCGGGAAAAGGTGTCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
||
| 3UTR CCA 72 bp | GGGAATTACATAGTTTCCTACACGGATGTCTCTGTCTaGGACACGGGAATTCCCAGGTACCACAGGGTACAA | + |
|
Preference number: 3 (lower is better) Translates to: GNYIVSYTDVSV*DTGIPRYHRVQ Trigger: TTGTACCCTGTGGTACCTGGGAATTCCCGTGTCCCAGACAGAGACATCCGTGTAGGAAACTATGTAATTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGATGCAGCCAGGTGCAGACCAGATGCAATCACTTAGCTTGTGCCGTGATAAAAGGAGAGTGTGCCTCTaGTGTATAACAAAGACCCCA | + |
|
Preference number: 3 (lower is better) Translates to: EMQPGADQMQSLSLCRDKRRVCL*CITKTP Trigger: TGGGGTCTTTGTTATACACAAGAGGCACACTCTCCT...TTTATCACGGCACAAGCTAAGTGATTGCATCTGGTCTGCACCTGGCTGCATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165764.8 ENSMUST00000172069.2 |
||
| 3UTR TCA 72 bp | CACATGGTCCAGGTTCAGTCTGAGAATGTATGGTGCTaGATAGCCAGGGATAGACTCTGGCAGGAGATAGAA | + |
|
Preference number: 3 (lower is better) Translates to: HMVQVQSENVWC*IARDRLWQEIE Trigger: TTCTATCTCCTGCCAGAGTCTATCCCTGGCTATTCAGCACCATACATTCTCAGACTGAACCTGGACCATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165764.8 ENSMUST00000172069.2 |
||
| 3UTR TCA 72 bp | GTCTTCCGAATGGTTATCTATCTACAAACTGTAGATTaGTGCTCCTCTCAGGGACCAGGACAGTCCGGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: VFRMVIYLQTVD*CSSQGPGQSGS Trigger: TGACCCGGACTGTCCTGGTCCCTGAGAGGAGCATCAATCTACAGTTTGTAGATAGATAACCATTCGGAAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
||
| 3UTR CCA 72 bp | AGTAGACTAGTCATTACTCTTCTCAGAAGGCACACATaGTCAGGTAGAGATGCAGCCAGGTGCAGACCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: SRLVITLLRRHT*SGRDAARCRPD Trigger: ATCTGGTCTGCACCTGGCTGCATCTCTACCTGACCATGTGTGCCTTCTGAGAAGAGTAATGACTAGTCTACT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165764.8 ENSMUST00000172069.2 |
||
| 3UTR CCA 72 bp | ATAGGAAGAGCACCTGGCTCAGGTAGCACTTCAAAATaGGTCAAGATCTGGGACAAAGCCATTTGTAGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: IGRAPGSGSTSK*VKIWDKAICSS Trigger: TGAGCTACAAATGGCTTTGTCCCAGATCTTGACCCATTTTGAAGTGCTACCTGAGCCAGGTGCTCTTCCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
||
| 3UTR TCA 72 bp | TTTAAGGATGTGTTAAAATCTGAAGGCATTGGATCCTaGGGAATGATCAGGAGAGGCACTGAGCAGGAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: FKDVLKSEGIGS*GMIRRGTEQEG Trigger: TCCTTCCTGCTCAGTGCCTCTCCTGATCATTCCTCAGGATCCAATGCCTTCAGATTTTAACACATCCTTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165764.8 ENSMUST00000172069.2 |
||
| 3UTR GCA 72 bp | GACCAGATGCAATCACTTAGCTTGTGCCGTGATAAATaGTTAGACAGAGCATCAACGAACACTACAGGATCA | + |
|
Preference number: 3 (lower is better) Translates to: DQMQSLSLCRDK*LDRASTNTTGS Trigger: TGATCCTGTAGTGTTCGTTGATGCTCTGTCTAAGCATTTATCACGGCACAAGCTAAGTGATTGCATCTGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165764.8 ENSMUST00000172069.2 |
||
| 3UTR CAA 72 bp | CACGTTGTCCAGAGTTCCAGCATAGCCCGCGGCTGCTaGTGGCCGGAGGAGGAGCGGGGCCAGAAGACTTCG | + |
|
Preference number: 4 (lower is better) Translates to: HVVQSSSIARGC*WPEEERGQKTS Trigger: CGAAGTCTTCTGGCCCCGCTCCTCCTCCGGCCACAAGCAGCCGCGGGCTATGCTGGAACTCTGGACAACGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
||
| CDS-3UTR GCA 90 bp | GCTTGTGGCCGGAGGAGGAGCGGGGCCAGAAGACTTCGGAGCCTCTGCCATTCTAGCGAGGCATCCAGCTaGAGAGGCAGGTGGATTCGG | + |
|
Preference number: 4 (lower is better) Translates to: ACGRRRSGARRLRSLCHSSEASS*RGRWIR Trigger: CCGAATCCACCTGCCTCTGCAGCTGGATGCCTCGCT...AGAATGGCAGAGGCTCCGAAGTCTTCTGGCCCCGCTCCTCCTCCGGCCACAAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
||
| CDS-3UTR TCA 90 bp | GCTTGTGGCCGGAGGAGGAGCGGGGCCAGAAGACTTCGGAGCCTCTGCCATTCTCAGCGCTCTGGACAGTaGCTTTCTTGTCGCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ACGRRRSGARRLRSLCHSQRSGQ*LSCRRS Trigger: GCTCCTGCGACAAGAAAGTCACTGTCCAGAGCGCTG...AGAATGGCAGAGGCTCCGAAGTCTTCTGGCCCCGCTCCTCCTCCGGCCACAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
||
| CDS-3UTR CCA 90 bp | TCTGCGATGCCTGCTGAGTCAGGCCAAGTACACATAGGTCAGGACCTGCTTCCTGAGCCACGTCCCCGCTaGCGCCTTAGTCGTCGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SAMPAESGQVHIGQDLLPEPRPR*RLSRRT Trigger: TGTGCGACGACTAAGGCGCCAGCGGGGACGTGGCTC...AGGAAGCAGGTCCTGACCTATGTGTACTTGGCCTGACTCAGCAGGCATCGCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165764.8 |
||
| CDS-3UTR CCA 90 bp | GAAGGCACACATGGTCAGGTAGAGATGCAGCCAGGTGCAGACCAGATGCAATCAGCAGTGCCATGGGGGTaGGCACAGGAGCCACGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: EGTHGQVEMQPGADQMQSAVPWG*AQEPRV Trigger: GACCCGTGGCTCCTGTGCCCACCCCCATGGCACTGC...TGATTGCATCTGGTCTGCACCTGGCTGCATCTCTACCTGACCATGTGTGCCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165764.8 |
||
| CDS-3UTR GCA 90 bp | CCTGCTGAGTCAGGCCAAGTACACATAGGTCAGGACCTGCTTCCTGGAGTTTGCGGAGAACCGACTCACTaGCTCTGGAGCCCAGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PAESGQVHIGQDLLPGVCGEPTH*LWSPAR Trigger: CCTCGCTGGGCTCCAGAGGCAGTGAGTCGGTTCTCC...GCAAACTCCAGGAAGCAGGTCCTGACCTATGTGTACTTGGCCTGACTCAGCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165764.8 ENSMUST00000172069.2 |
||
| CDS-3UTR CCA 90 bp | GGAAGGAGAAAGATGGTGGTTCTGCGATGCCTGCTGAGTCAGGCCAAGTACACAGACAGAGCAGTGCCATaGGGGTGGGCACAGGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GRRKMVVLRCLLSQAKYTDRAVP*GWAQEP Trigger: TGGCTCCTGTGCCCACCCCCATGGCACTGCTCTGTC...TGTGTACTTGGCCTGACTCAGCAGGCATCGCAGAACCACCATCTTTCTCCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165764.8 |
||
| CDS-3UTR CCA 90 bp | TCAGGCCAAGTACACATAGGTCAGGACCTGCTTCCTGGAGTTTGCTCGGTCAGAAGAGATGCAAATGGGTaGGGGGTCGGACCCTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SGQVHIGQDLLPGVCSVRRDANG*GVGPSP Trigger: GGGGGAGGGTCCGACCCCCCACCCATTTGCATCTCT...TCTGACCGAGCAAACTCCAGGAAGCAGGTCCTGACCTATGTGTACTTGGCCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165764.8 |
||
| 3UTR CAA 72 bp | CTCCTCTCAGGGACCAGGACAGTCCGGGTCATGGGCTaGATAGGAAGAGCACCTGGCTCAGGTAGCACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLSGTRTVRVMG*IGRAPGSGSTS Trigger: TGAAGTGCTACCTGAGCCAGGTGCTCTTCCTATCAAGCCCATGACCCGGACTGTCCTGGTCCCTGAGAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
||
| CDS-3UTR GCA 90 bp | GGTCAGGTAGAGATGCAGCCAGGTGCAGACCAGATGCAATCACTTAGCTTGTGCAGCGAGGCATCCAGCTaGAGAGGCAGGTGGATTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GQVEMQPGADQMQSLSLCSEASS*RGRWIR Trigger: CCGAATCCACCTGCCTCTGCAGCTGGATGCCTCGCT...GCACAAGCTAAGTGATTGCATCTGGTCTGCACCTGGCTGCATCTCTACCTGACC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165764.8 ENSMUST00000172069.2 |
||
| CDS-3UTR GCA 90 bp | TCAGGCCAAGTACACATAGGTCAGGACCTGCTTCCTGGAGTTTGCTCGGTCAGAGCAGCGCCATGCACCTaGAGTTCATGCAGCCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SGQVHIGQDLLPGVCSVRAAPCT*SSCSLD Trigger: GTCCAGGCTGCATGAACTGCAGGTGCATGGCGCTGC...TCTGACCGAGCAAACTCCAGGAAGCAGGTCCTGACCTATGTGTACTTGGCCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165764.8 |
||
| CDS-3UTR GCA 90 bp | GCGATGCCTGCTGAGTCAGGCCAAGTACACATAGGTCAGGACCTGCTTCCTGGACCAGGTATAAGGTGGTaGAACCAGTTGGGCATCGCC | + |
|
Preference number: 4 (lower is better) Translates to: AMPAESGQVHIGQDLLPGPGIRW*NQLGIA Trigger: GGCGATGCCCAACTGGTTGCACCACCTTATACCTGG...TCCAGGAAGCAGGTCCTGACCTATGTGTACTTGGCCTGACTCAGCAGGCATCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165764.8 |
||
| CDS-3UTR GCA 90 bp | TCTGCGATGCCTGCTGAGTCAGGCCAAGTACACATAGGTCAGGACCTGCTTCCTTCTCGCAGCTCCACGTaGCTCTGGGCAAAGGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SAMPAESGQVHIGQDLLPSRSST*LWAKAN Trigger: GTTTGCCTTTGCCCAGAGGCACGTGGAGCTGCGAGA...AGGAAGCAGGTCCTGACCTATGTGTACTTGGCCTGACTCAGCAGGCATCGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165764.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGGCACACATGGTCAGGTAGAGATGCAGCCAGGTGCAGACCAGATGCAATCGAGTGGAGTGCAGTCTaGACATCGGGGTGCCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RRHTWSGRDAARCRPDAIEWSAV*TSGCRE Trigger: TTCCCGGCACCCCGATGTCCAGACTGCACTCCACTC...GATTGCATCTGGTCTGCACCTGGCTGCATCTCTACCTGACCATGTGTGCCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165764.8 |
||
| 3UTR CAA 72 bp | CCAAGTACACATAGGTCAGGACCTGCTTCCTGGAGTTaGCTCGGTCAGACAGGCCTCCAAGGAGAGTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PSTHRSGPASWS*LGQTGLQGECA Trigger: GGCACACTCTCCTTGGAGGCCTGTCTGACCGAGCAAACTCCAGGAAGCAGGTCCTGACCTATGTGTACTTGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165764.8 ENSMUST00000172069.2 |
||
| 3UTR CAA 72 bp | CGGGCCCAGGGTCCAGGTATAAGGTGGTGCAACCAGTaGGGCATCGCCATGGTCAAGAGTGTAGACACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RAQGPGIRWCNQ*GIAMVKSVDTN Trigger: GTTTGTGTCTACACTCTTGACCATGGCGATGCCCAACTGGTTGCACCACCTTATACCTGGACCCTGGGCCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
||
| 3UTR CAA 72 bp | TCAAGCTCTGCCAAGCGTCTCCCGATGCAGCTCCGTTaGCCAAAGCCGAAGGGAAGAGATGCAAATGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSSAKRLPMQLR*PKPKGRDANGW Trigger: CCACCCATTTGCATCTCTTCCCTTCGGCTTTGGCAAACGGAGCTGCATCGGGAGACGCTTGGCAGAGCTTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
||
| CDS-3UTR TCA 90 bp | TCAGGCCAAGTACACATAGGTCAGGACCTGCTTCCTGGAGTTTGCTCGGTCAGACAGCGCTCTGGACAGTaGCTTTCTTGTCGCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SGQVHIGQDLLPGVCSVRQRSGQ*LSCRRS Trigger: GCTCCTGCGACAAGAAAGTCACTGTCCAGAGCGCTG...TCTGACCGAGCAAACTCCAGGAAGCAGGTCCTGACCTATGTGTACTTGGCCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165764.8 ENSMUST00000172069.2 |
||
| CDS-3UTR TCA 90 bp | GTAGAGATGCAGCCAGGTGCAGACCAGATGCAATCACTTAGCTTGTGCCGTGATCACGGGTCCCAGCTGTaGTCTCAGAGTGGAGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VEMQPGADQMQSLSLCRDHGSQL*SQSGVQ Trigger: CTGCACTCCACTCTGAGATCACAGCTGGGACCCGTG...ATCACGGCACAAGCTAAGTGATTGCATCTGGTCTGCACCTGGCTGCATCTCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165764.8 |
||
| CDS-3UTR TCA 90 bp | GCGAATCCCTCCCCAGGCTGCCTGGAGTTGGTAGTTAACCCCTGCGTTGGCACTCTACAAACTGTAGATTaGTGCTCCTCTCAGGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: ANPSPGCLELVVNPCVGTLQTVD*CSSQGP Trigger: TGGTCCCTGAGAGGAGCATCAATCTACAGTTTGTAG...AGTGCCAACGCAGGGGTTAACTACCAACTCCAGGCAGCCTGGGGAGGGATTCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165764.8 |
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| CDS-3UTR TCA 90 bp | ATGCCTGCTGAGTCAGGCCAAGTACACATAGGTCAGGACCTGCTTCCTGGAGTTGCAAAGGCAAACATCTaGTCCCAGTCTCGGCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: MPAESGQVHIGQDLLPGVAKANI*SQSRQR Trigger: CCTCTGCCGAGACTGGGATCAGATGTTTGCCTTTGC...AACTCCAGGAAGCAGGTCCTGACCTATGTGTACTTGGCCTGACTCAGCAGGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165764.8 |
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| CDS-3UTR GCA 90 bp | GGAAGGAGAAAGATGGTGGTTCTGCGATGCCTGCTGAGTCAGGCCAAGTACACATCTTGTCGCAGGAGCTaGTCCACAAGTGTAGGGTCG | + |
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Preference number: 4 (lower is better) Translates to: GRRKMVVLRCLLSQAKYTSCRRS*STSVGS Trigger: CGACCCTACACTTGTGGAGCAGCTCCTGCGACAAGA...TGTGTACTTGGCCTGACTCAGCAGGCATCGCAGAACCACCATCTTTCTCCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165764.8 ENSMUST00000172069.2 |
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| CDS-3UTR GCA 90 bp | CCCAGTAGACTAGTCATTACTCTTCTCAGAAGGCACACATGGTCAGGTAGAGATGCTGGGACAGAGCAGTaGCATGGGGGTGGGCACAGG | + |
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Preference number: 4 (lower is better) Translates to: PSRLVITLLRRHTWSGRDAGTEQ*HGGGHR Trigger: CCTGTGCCCACCCCCATGGCACTGCTCTGTCCCAGC...ATCTCTACCTGACCATGTGTGCCTTCTGAGAAGAGTAATGACTAGTCTACTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165764.8 |
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| CDS-3UTR CCA 90 bp | GAAGGCACACATGGTCAGGTAGAGATGCAGCCAGGTGCAGACCAGATGCAATCAGGTGGTGCAACCAGTTaGGCATCGCCATGGTCAAGA | + |
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Preference number: 4 (lower is better) Translates to: EGTHGQVEMQPGADQMQSGGATS*ASPWSR Trigger: TCTTGACCATGGCGATGCCCAACTGGTTGCACCACC...TGATTGCATCTGGTCTGCACCTGGCTGCATCTCTACCTGACCATGTGTGCCTTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165764.8 |
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| CDS-3UTR CCA 90 bp | GGAAGGAGAAAGATGGTGGTTCTGCGATGCCTGCTGAGTCAGGCCAAGTACACATTTAACAGGGGCAGCTaGGACAGAGCAGTGCCATGG | + |
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Preference number: 4 (lower is better) Translates to: GRRKMVVLRCLLSQAKYTFNRGS*DRAVPW Trigger: CCATGGCACTGCTCTGTCCCAGCTGCCCCTGTTAAA...TGTGTACTTGGCCTGACTCAGCAGGCATCGCAGAACCACCATCTTTCTCCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165764.8 |
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| CDS-3UTR CCA 90 bp | CCTGCTGAGTCAGGCCAAGTACACATAGGTCAGGACCTGCTTCCTGGAGTTTGCGGTCTGGAAACTGTGTaGGGTCCCTTGAAGTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: PAESGQVHIGQDLLPGVCGLETV*GPLKWH Trigger: ATGCCACTTCAAGGGACCCCACACAGTTTCCAGACC...GCAAACTCCAGGAAGCAGGTCCTGACCTATGTGTACTTGGCCTGACTCAGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165764.8 |
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| CDS-3UTR GCA 90 bp | CCCAGTAGACTAGTCATTACTCTTCTCAGAAGGCACACATGGTCAGGTAGAGATGGAGAACCGACTCACTaGCTCTGGAGCCCAGCGAGG | + |
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Preference number: 4 (lower is better) Translates to: PSRLVITLLRRHTWSGRDGEPTH*LWSPAR Trigger: CCTCGCTGGGCTCCAGAGGCAGTGAGTCGGTTCTCC...ATCTCTACCTGACCATGTGTGCCTTCTGAGAAGAGTAATGACTAGTCTACTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165764.8 ENSMUST00000172069.2 |
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| CDS-3UTR CCA 90 bp | GAAGGCACACATGGTCAGGTAGAGATGCAGCCAGGTGCAGACCAGATGCAATCATTCCCCACTATGGACTaGACAGACACCTTTTCCCGA | + |
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Preference number: 4 (lower is better) Translates to: EGTHGQVEMQPGADQMQSFPTMD*TDTFSR Trigger: TCGGGAAAAGGTGTCTGTCCAGTCCATAGTGGGGAA...TGATTGCATCTGGTCTGCACCTGGCTGCATCTCTACCTGACCATGTGTGCCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165764.8 |
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| CDS-3UTR CCA 90 bp | GAAGGCACACATGGTCAGGTAGAGATGCAGCCAGGTGCAGACCAGATGCAATCATGGGGTCCCTTGAAGTaGCATAGTGACATAGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: EGTHGQVEMQPGADQMQSWGPLK*HSDIGR Trigger: TCTCCCTATGTCACTATGCCACTTCAAGGGACCCCA...TGATTGCATCTGGTCTGCACCTGGCTGCATCTCTACCTGACCATGTGTGCCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165764.8 |
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| CDS-3UTR GCA 90 bp | CCCAGTAGACTAGTCATTACTCTTCTCAGAAGGCACACATGGTCAGGTAGAGATTCTTGTCGCAGGAGCTaGTCCACAAGTGTAGGGTCG | + |
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Preference number: 4 (lower is better) Translates to: PSRLVITLLRRHTWSGRDSCRRS*STSVGS Trigger: CGACCCTACACTTGTGGAGCAGCTCCTGCGACAAGA...ATCTCTACCTGACCATGTGTGCCTTCTGAGAAGAGTAATGACTAGTCTACTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165764.8 ENSMUST00000172069.2 |
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| CDS-3UTR GCA 90 bp | GAGATGCAGCCAGGTGCAGACCAGATGCAATCACTTAGCTTGTGCCGTGATAAAGCGCATTTGAATACCTaGAGTTCATGCAGCCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: EMQPGADQMQSLSLCRDKAHLNT*SSCSLD Trigger: GTCCAGGCTGCATGAACTGCAGGTATTCAAATGCGC...TTTATCACGGCACAAGCTAAGTGATTGCATCTGGTCTGCACCTGGCTGCATCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
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| CDS-3UTR TCA 90 bp | GGTCAGGTAGAGATGCAGCCAGGTGCAGACCAGATGCAATCACTTAGCTTGTGCATCTCAACACTTCTTTaGTCACAGCCTTTAACAGGG | + |
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Preference number: 4 (lower is better) Translates to: GQVEMQPGADQMQSLSLCISTLL*SQPLTG Trigger: CCCTGTTAAAGGCTGTGATCAAAGAAGTGTTGAGAT...GCACAAGCTAAGTGATTGCATCTGGTCTGCACCTGGCTGCATCTCTACCTGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165764.8 |
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| CDS-3UTR CCA 90 bp | ATGCCTGCTGAGTCAGGCCAAGTACACATAGGTCAGGACCTGCTTCCTGGAGTTGGTAGCACTTCAAAATaGGTCAAGATCTGGGACAAA | + |
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Preference number: 4 (lower is better) Translates to: MPAESGQVHIGQDLLPGVGSTSK*VKIWDK Trigger: TTTGTCCCAGATCTTGACCCATTTTGAAGTGCTACC...AACTCCAGGAAGCAGGTCCTGACCTATGTGTACTTGGCCTGACTCAGCAGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165764.8 |
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| 3UTR CAA 72 bp | ATGCAGCCAGGTGCAGACCAGATGCAATCACTTAGCTaGTGCCGTGATAAATGCTTAGACAGAGCATCAACG | + |
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Preference number: 4 (lower is better) Translates to: MQPGADQMQSLS*CRDKCLDRAST Trigger: CGTTGATGCTCTGTCTAAGCATTTATCACGGCACAAGCTAAGTGATTGCATCTGGTCTGCACCTGGCTGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165764.8 ENSMUST00000172069.2 |
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| CDS-3UTR GCA 90 bp | TGTAAATTAGGCAAGGGCAGATTTACTTCCCTAGAGGAAAGATTAAGAGAGAAAAGACTTCGGAGCCTCTaGCATTCTTCACCATCCGCC | + |
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Preference number: 4 (lower is better) Translates to: CKLGKGRFTSLEERLREKRLRSL*HSSPSA Trigger: GGCGGATGGTGAAGAATGGCAGAGGCTCCGAAGTCT...TTTCTCTCTTAATCTTTCCTCTAGGGAAGTAAATCTGCCCTTGCCTAATTTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165764.8 |
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| CDS-3UTR TCA 90 bp | TGTAAATTAGGCAAGGGCAGATTTACTTCCCTAGAGGAAAGATTAAGAGAGAAAAGCCCACTGCATGTATaGAGGTTTCTGTGTCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: CKLGKGRFTSLEERLREKSPLHV*RFLCQE Trigger: CTCCTGACACAGAAACCTTCATACATGCAGTGGGCT...TTTCTCTCTTAATCTTTCCTCTAGGGAAGTAAATCTGCCCTTGCCTAATTTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165764.8 |
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| CDS-3UTR CAA 90 bp | GAAGGCACACATGGTCAGGTAGAGATGCAGCCAGGTGCAGACCAGATGCAATCAATAGCCCGCGGCTGCTaGTGGCCGGAGGAGGAGCGG | + |
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Preference number: 5 (lower is better) Translates to: EGTHGQVEMQPGADQMQSIARGC*WPEEER Trigger: CCGCTCCTCCTCCGGCCACAAGCAGCCGCGGGCTAT...TGATTGCATCTGGTCTGCACCTGGCTGCATCTCTACCTGACCATGTGTGCCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165764.8 |
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| CDS CCA 90 bp | GGCAACGTAAACTGTGCGAAGTGTCCCAAAGCTGCCAGACCATATTaGCCCGTACCGCGCAGCGCCATGCACCTGCAGTTCATGCAGCCT | + |
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Preference number: 5 (lower is better) Translates to: GNVNCAKCPKAARPY*PVPRSAMHLQFMQP Trigger: AGGCTGCATGAACTGCAGGTGCATGGCGCTGCGCGGTACGGGCCAATATGGTCTGGCAGCTTTGGGACACTTCGCACAGTTTACGTTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165764.8 |
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| CDS CCA 90 bp | GGCAACGTAAACTGTGCGAAGTGTCCCAAAGCTGCCAGACCATATTaGCCCGTACCGCGCAGCGCCATGCACCTGAGAGAATCGGCGCAT | + |
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Preference number: 5 (lower is better) Translates to: GNVNCAKCPKAARPY*PVPRSAMHLRESAH Trigger: ATGCGCCGATTCTCTCAGGTGCATGGCGCTGCGCGGTACGGGCCAATATGGTCTGGCAGCTTTGGGACACTTCGCACAGTTTACGTTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
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| CDS-3UTR CAA 90 bp | GGTCAGGTAGAGATGCAGCCAGGTGCAGACCAGATGCAATCACTTAGCTTGTGCAGGTGGTGCAACCAGTaGGGCATCGCCATGGTCAAG | + |
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Preference number: 5 (lower is better) Translates to: GQVEMQPGADQMQSLSLCRWCNQ*GIAMVK Trigger: CTTGACCATGGCGATGCCCAACTGGTTGCACCACCT...GCACAAGCTAAGTGATTGCATCTGGTCTGCACCTGGCTGCATCTCTACCTGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165764.8 |
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| CDS GCA 72 bp | CAGGGATGTCAGACAAGCTCCGGAGAACCGACTCACTaGCTCTGGAGCCCAGCGAGGCATCCAGCTGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: QGCQTSSGEPTH*LWSPARHPAAE Trigger: CTCTGCAGCTGGATGCCTCGCTGGGCTCCAGAGGCAGTGAGTCGGTTCTCCGGAGCTTGTCTGACATCCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165764.8 ENSMUST00000172069.2 |
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| CDS CAA 72 bp | CCGCGCAGCGCCATGCACCTGAGAGAATCGGCGCATTaGAATACCTGCAGTTCATGCAGCCTGGACAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: PRSAMHLRESAH*NTCSSCSLDSP Trigger: GGGGCTGTCCAGGCTGCATGAACTGCAGGTATTCAAATGCGCCGATTCTCTCAGGTGCATGGCGCTGCGCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
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| CDS CAA 90 bp | CGGCAACGTAAACTGTGCGAAGTGTCCCAAAGCTGCCAGACCATATaGGCCCGTACCGCGCAGCGCCATGCACCTGCAGTTCATGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: RQRKLCEVSQSCQTI*ARTAQRHAPAVHAA Trigger: GGCTGCATGAACTGCAGGTGCATGGCGCTGCGCGGTACGGGCCAATATGGTCTGGCAGCTTTGGGACACTTCGCACAGTTTACGTTGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165764.8 |
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| CDS CAA 90 bp | CGGCAACGTAAACTGTGCGAAGTGTCCCAAAGCTGCCAGACCATATaGGCCCGTACCGCGCAGCGCCATGCACCTGAGAGAATCGGCGCA | + |
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Preference number: 6 (lower is better) Translates to: RQRKLCEVSQSCQTI*ARTAQRHAPERIGA Trigger: TGCGCCGATTCTCTCAGGTGCATGGCGCTGCGCGGTACGGGCCAATATGGTCTGGCAGCTTTGGGACACTTCGCACAGTTTACGTTGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
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| CDS TCA 72 bp | AGCGAGGCATCCAGCTGCAGAGGCAGGTGGATTCGGTaGAAAACTCTGGAGGCGAGCTTGACTGCCTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: SEASSCRGRWIR*KTLEASLTAWV Trigger: GACCCAGGCAGTCAAGCTCGCCTCCAGAGTTTTTCACCGAATCCACCTGCCTCTGCAGCTGGATGCCTCGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165764.8 ENSMUST00000172069.2 |
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| CDS GCA 72 bp | GGTCGGCAACGTAAACTGTGCGAAGTGTCCCAAAGCTaGCAGACCATATTGGCCCGTACCGCGCAGCGCCAT | + |
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Preference number: 6 (lower is better) Translates to: GRQRKLCEVSQS*QTILARTAQRH Trigger: ATGGCGCTGCGCGGTACGGGCCAATATGGTCTGGCAGCTTTGGGACACTTCGCACAGTTTACGTTGCCGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165764.8 ENSMUST00000172069.2 |
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| CDS GCA 72 bp | GTTAGCAATCCGCAAGCACGCTGGTGGCGGCGACGGTaGTCTGCCCATGATGAGAAACTACAGCGCTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: VSNPQARWWRRR*SAHDEKLQRSG Trigger: TCCAGAGCGCTGTAGTTTCTCATCATGGGCAGAGCACCGTCGCCGCCACCAGCGTGCTTGCGGATTGCTAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165764.8 |
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| CDS CCA 72 bp | AACTGTGCGAAGTGTCCCAAAGCTGCCAGACCATATTaGCCCGTACCGCGCAGCGCCATGCACCTGCAGTTC | + |
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Preference number: 6 (lower is better) Translates to: NCAKCPKAARPY*PVPRSAMHLQF Trigger: GAACTGCAGGTGCATGGCGCTGCGCGGTACGGGCCAATATGGTCTGGCAGCTTTGGGACACTTCGCACAGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165764.8 |
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| CDS CCA 72 bp | AACTGTGCGAAGTGTCCCAAAGCTGCCAGACCATATTaGCCCGTACCGCGCAGCGCCATGCACCTGAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: NCAKCPKAARPY*PVPRSAMHLRE Trigger: TTCTCTCAGGTGCATGGCGCTGCGCGGTACGGGCCAATATGGTCTGGCAGCTTTGGGACACTTCGCACAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
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| CDS CAA 72 bp | AAACTGTGCGAAGTGTCCCAAAGCTGCCAGACCATATaGGCCCGTACCGCGCAGCGCCATGCACCTGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: KLCEVSQSCQTI*ARTAQRHAPAV Trigger: AACTGCAGGTGCATGGCGCTGCGCGGTACGGGCCAATATGGTCTGGCAGCTTTGGGACACTTCGCACAGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165764.8 |
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| CDS CAA 72 bp | AAACTGTGCGAAGTGTCCCAAAGCTGCCAGACCATATaGGCCCGTACCGCGCAGCGCCATGCACCTGAGAGA | + |
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Preference number: 6 (lower is better) Translates to: KLCEVSQSCQTI*ARTAQRHAPER Trigger: TCTCTCAGGTGCATGGCGCTGCGCGGTACGGGCCAATATGGTCTGGCAGCTTTGGGACACTTCGCACAGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172069.2 |
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| CDS TCA 72 bp | TCTGCCCATGATGAGAAACTACAGCGCTCTGGACAGTaGCTTTCTTGTCGCAGGAGCTGCTCCACAAGTGTA | + |
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Preference number: 6 (lower is better) Translates to: SAHDEKLQRSGQ*LSCRRSCSTSV Trigger: TACACTTGTGGAGCAGCTCCTGCGACAAGAAAGTCACTGTCCAGAGCGCTGTAGTTTCTCATCATGGGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165764.8 ENSMUST00000172069.2 |
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