Pregenerated sensors for CYP27A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026170Ensembl transcript IDs: ENSMUST00000027356.7
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | TGCTGTCTTAAGTGGGTGCTGCTCAGTAGAGATTGTGCCAGACATTaGGTGTCTATAGGAAGGGCACAGAGTTCTCCTGTTGAATCTGAC | + |
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Preference number: 2 (lower is better) Translates to: CCLKWVLLSRDCARH*VSIGRAQSSPVESD Trigger: GTCAGATTCAACAGGAGAACTCTGTGCCCTTCCTATAGACACCAAATGTCTGGCACAATCTCTACTGAGCAGCACCCACTTAAGACAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| 3UTR CCA 72 bp | CATGAGACTGGCCAAGAACTTCTGTGCCAGGGCTTCTaGACGAGCTCCATGAAGGCGGGAGCCCAGCTCGGT | + |
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Preference number: 3 (lower is better) Translates to: HETGQELLCQGF*TSSMKAGAQLG Trigger: ACCGAGCTGGGCTCCCGCCTTCATGGAGCTCGTCCAGAAGCCCTGGCACAGAAGTTCTTGGCCAGTCTCATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| 3UTR GCA 72 bp | GTTATTATAAGGTGCTCTGCTGTCTTAAGTGGGTGCTaGTCAGTAGAGATTGTGCCAGACATTTGGTGTCTA | + |
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Preference number: 3 (lower is better) Translates to: VIIRCSAVLSGC*SVEIVPDIWCL Trigger: TAGACACCAAATGTCTGGCACAATCTCTACTGAGCAGCACCCACTTAAGACAGCAGAGCACCTTATAATAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| 3UTR GCA 72 bp | ACTGTTATTATAAGGTGCTCTGCTGTCTTAAGTGGGTaGTGCTCAGTAGAGATTGTGCCAGACATTTGGTGT | + |
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Preference number: 3 (lower is better) Translates to: TVIIRCSAVLSG*CSVEIVPDIWC Trigger: ACACCAAATGTCTGGCACAATCTCTACTGAGCAGCACCCACTTAAGACAGCAGAGCACCTTATAATAACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| 3UTR CCA 72 bp | AAGGACTGTTATTATAAGGTGCTCTGCTGTCTTAAGTaGGTGCTGCTCAGTAGAGATTGTGCCAGACATTTG | + |
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Preference number: 3 (lower is better) Translates to: KDCYYKVLCCLK*VLLSRDCARHL Trigger: CAAATGTCTGGCACAATCTCTACTGAGCAGCACCCACTTAAGACAGCAGAGCACCTTATAATAACAGTCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| 3UTR-3UTR CAA 90 bp | TTTAAATCATACCCAAGGACTGTTATTATAAGGTGCTCTGCTGTCTTAAGTGGGGATTGTGCCAGACATTaGGTGTCTATAGGAAGGGCA | + |
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Preference number: 3 (lower is better) Translates to: FKSYPRTVIIRCSAVLSGDCARH*VSIGRA Trigger: TGCCCTTCCTATAGACACCAAATGTCTGGCACAATC...CCCACTTAAGACAGCAGAGCACCTTATAATAACAGTCCTTGGGTATGATTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| 3UTR GCA 72 bp | TATTTTAAATCATACCCAAGGACTGTTATTATAAGGTaGTCTGCTGTCTTAAGTGGGTGCTGCTCAGTAGAG | + |
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Preference number: 3 (lower is better) Translates to: YFKSYPRTVIIR*SAVLSGCCSVE Trigger: CTCTACTGAGCAGCACCCACTTAAGACAGCAGAGCACCTTATAATAACAGTCCTTGGGTATGATTTAAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS-3UTR TCA 90 bp | GACTGGCCAAGAACTTCTGTGCCAGGGCTTCTGGACGAGCTCCATGAAGGCGGGAGGCGCGGCCGGTCTTaGCCTGTTCCTGGACCCTCC | + |
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Preference number: 4 (lower is better) Translates to: DWPRTSVPGLLDELHEGGRRGRS*PVPGPS Trigger: GGAGGGTCCAGGAACAGGTCAAGACCGGCCGCGCCT...CCCGCCTTCATGGAGCTCGTCCAGAAGCCCTGGCACAGAAGTTCTTGGCCAGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS-3UTR CCA 90 bp | CTTCTGTGCCAGGGCTTCTGGACGAGCTCCATGAAGGCGGGAGCCCAGCTCGGTGTACTCTCCTGTGCCTaGAGGGCTGCAGGGATCGTG | + |
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Preference number: 4 (lower is better) Translates to: LLCQGFWTSSMKAGAQLGVLSCA*RAAGIV Trigger: CACGATCCCTGCAGCCCTCCAGGCACAGGAGAGTAC...ACCGAGCTGGGCTCCCGCCTTCATGGAGCTCGTCCAGAAGCCCTGGCACAGAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS-3UTR CCA 90 bp | CTTCTGTGCCAGGGCTTCTGGACGAGCTCCATGAAGGCGGGAGCCCAGCTCGGTGCAAAGTCCTTGTGCTaGGGCACCTTCCCGAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: LLCQGFWTSSMKAGAQLGAKSLC*GTFPKG Trigger: GCCCTTCGGGAAGGTGCCCCAGCACAAGGACTTTGC...ACCGAGCTGGGCTCCCGCCTTCATGGAGCTCGTCCAGAAGCCCTGGCACAGAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS-3UTR CCA 90 bp | CTTCTGTGCCAGGGCTTCTGGACGAGCTCCATGAAGGCGGGAGCCCAGCTCGGTGCCTCACCTTCTTGCTaGGAACCAGGACGATGCGGG | + |
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Preference number: 4 (lower is better) Translates to: LLCQGFWTSSMKAGAQLGASPSC*EPGRCG Trigger: CCCGCATCGTCCTGGTTCCCAGCAAGAAGGTGAGGC...ACCGAGCTGGGCTCCCGCCTTCATGGAGCTCGTCCAGAAGCCCTGGCACAGAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS-3UTR GCA 90 bp | CCAAGAACTTCTGTGCCAGGGCTTCTGGACGAGCTCCATGAAGGCGGGAGCCCACTCCGTACTCTCCTGTaGCTGGAGGGCTGCAGGGAT | + |
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Preference number: 4 (lower is better) Translates to: PRTSVPGLLDELHEGGSPLRTLL*LEGCRD Trigger: ATCCCTGCAGCCCTCCAGGCACAGGAGAGTACGGAG...TGGGCTCCCGCCTTCATGGAGCTCGTCCAGAAGCCCTGGCACAGAAGTTCTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS-3UTR GCA 90 bp | CAAGAACTTCTGTGCCAGGGCTTCTGGACGAGCTCCATGAAGGCGGGAGCCCAGGCAGCCTCACCTTCTTaGTGGGAACCAGGACGATGC | + |
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Preference number: 4 (lower is better) Translates to: QELLCQGFWTSSMKAGAQAASPS*WEPGRC Trigger: GCATCGTCCTGGTTCCCAGCAAGAAGGTGAGGCTGC...CTGGGCTCCCGCCTTCATGGAGCTCGTCCAGAAGCCCTGGCACAGAAGTTCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS-3UTR CCA 90 bp | CAGAGTTCTCCTGTTGAATCTGACATCGTGACATGTGACATGAGACTGGCCAAGGGCTCTGGCCCCTTGTaGGCAGAGGCCACGGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: QSSPVESDIVTCDMRLAKGSGPL*AEATAH Trigger: GTGGGCCGTGGCCTCTGCCCACAAGGGGCCAGAGCC...CTTGGCCAGTCTCATGTCACATGTCACGATGTCAGATTCAACAGGAGAACTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS-3UTR CCA 90 bp | GACTGGCCAAGAACTTCTGTGCCAGGGCTTCTGGACGAGCTCCATGAAGGCGGGCAGTGTCCTCAGGAATaGAGGGTTTCAGGCAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: DWPRTSVPGLLDELHEGGQCPQE*RVSGSQ Trigger: TTGGCTGCCTGAAACCCTCCATTCCTGAGGACACTG...CCCGCCTTCATGGAGCTCGTCCAGAAGCCCTGGCACAGAAGTTCTTGGCCAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS-3UTR GCA 90 bp | CCAAGAACTTCTGTGCCAGGGCTTCTGGACGAGCTCCATGAAGGCGGGAGCCCATGTCTCTGCAGAAAATaGAGCCTCACCTTCTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: PRTSVPGLLDELHEGGSPCLCRK*SLTFLL Trigger: CAGCAAGAAGGTGAGGCTGCATTTTCTGCAGAGACA...TGGGCTCCCGCCTTCATGGAGCTCGTCCAGAAGCCCTGGCACAGAAGTTCTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS-3UTR TCA 90 bp | CAGAGTTCTCCTGTTGAATCTGACATCGTGACATGTGACATGAGACTGGCCAAGTGGCACCTGGTCCCCTaGTTCACTCTCTGCCCGCAC | + |
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Preference number: 4 (lower is better) Translates to: QSSPVESDIVTCDMRLAKWHLVP*FTLCPH Trigger: GTGCGGGCAGAGAGTGAATCAGGGGACCAGGTGCCA...CTTGGCCAGTCTCATGTCACATGTCACGATGTCAGATTCAACAGGAGAACTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS-3UTR TCA 90 bp | CTTCTGTGCCAGGGCTTCTGGACGAGCTCCATGAAGGCGGGAGCCCAGCTCGGTATTTGGGAAGGAAAGTaGTATAGACTGAGTTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: LLCQGFWTSSMKAGAQLGIWEGK*YRLSSG Trigger: TCCAGAACTCAGTCTATATCACTTTCCTTCCCAAAT...ACCGAGCTGGGCTCCCGCCTTCATGGAGCTCGTCCAGAAGCCCTGGCACAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS-3UTR CCA 90 bp | CCAAGGACTGTTATTATAAGGTGCTCTGCTGTCTTAAGTGGGTGCTGCTCAGTATCGTGGCCTTGGCTCTaGCCCCTTGTGGGCAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: PRTVIIRCSAVLSGCCSVSWPWL*PLVGRG Trigger: GCCTCTGCCCACAAGGGGCCAGAGCCAAGGCCACGA...TACTGAGCAGCACCCACTTAAGACAGCAGAGCACCTTATAATAACAGTCCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS-3UTR CCA 90 bp | CTCAGTAGAGATTGTGCCAGACATTTGGTGTCTATAGGAAGGGCACAGAGTTCTCAGGGATCGTGGCCTTaGCTCTGGCCCCTTGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: LSRDCARHLVSIGRAQSSQGSWP*LWPLVG Trigger: GCCCACAAGGGGCCAGAGCCAAGGCCACGATCCCTG...AGAACTCTGTGCCCTTCCTATAGACACCAAATGTCTGGCACAATCTCTACTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS-3UTR CCA 90 bp | CAGAGTTCTCCTGTTGAATCTGACATCGTGACATGTGACATGAGACTGGCCAAGCTCTCTGCCCGCACCTaGTCCAGCCGGGTGATAAAG | + |
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Preference number: 4 (lower is better) Translates to: QSSPVESDIVTCDMRLAKLSART*SSRVIK Trigger: CTTTATCACCCGGCTGGACCAGGTGCGGGCAGAGAG...CTTGGCCAGTCTCATGTCACATGTCACGATGTCAGATTCAACAGGAGAACTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS-3UTR TCA 90 bp | CCTGTTGAATCTGACATCGTGACATGTGACATGAGACTGGCCAAGAACTTCTGTTTCCTCAGCCATCGGTaGGGCTGGAAGCTGTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: PVESDIVTCDMRLAKNFCFLSHR*GWKLLG Trigger: GCCCAACAGCTTCCAGCCTCACCGATGGCTGAGGAA...ACAGAAGTTCTTGGCCAGTCTCATGTCACATGTCACGATGTCAGATTCAACAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS-3UTR CCA 90 bp | GCCAGACATTTGGTGTCTATAGGAAGGGCACAGAGTTCTCCTGTTGAATCTGACGTCTTGTTCAGCACCTaGAGGTCGGGCAAGTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: ARHLVSIGRAQSSPVESDVLFST*RSGKCS Trigger: GCTGCACTTGCCCGACCTCCAGGTGCTGAACAAGAC...GTCAGATTCAACAGGAGAACTCTGTGCCCTTCCTATAGACACCAAATGTCTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS-3UTR GCA 90 bp | CCTGTTGAATCTGACATCGTGACATGTGACATGAGACTGGCCAAGAACTTCTGTTGGGCAAAGTCCTTGTaGTGGGGCACCTTCCCGAAG | + |
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Preference number: 4 (lower is better) Translates to: PVESDIVTCDMRLAKNFCWAKSL*WGTFPK Trigger: CTTCGGGAAGGTGCCCCAGCACAAGGACTTTGCCCA...ACAGAAGTTCTTGGCCAGTCTCATGTCACATGTCACGATGTCAGATTCAACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS-3UTR CCA 90 bp | CTGCTCAGTAGAGATTGTGCCAGACATTTGGTGTCTATAGGAAGGGCACAGAGTGTCTTGACCTGTTCCTaGACCCTCCGTACTCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: LLSRDCARHLVSIGRAQSVLTCS*TLRTLL Trigger: CAGGAGAGTACGGAGGGTCCAGGAACAGGTCAAGAC...ACTCTGTGCCCTTCCTATAGACACCAAATGTCTGGCACAATCTCTACTGAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS-3UTR CCA 90 bp | AGTTCTCCTGTTGAATCTGACATCGTGACATGTGACATGAGACTGGCCAAGAACGCTCAGGAAAGACACTaGGATCCCGGGACACCACGT | + |
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Preference number: 4 (lower is better) Translates to: SSPVESDIVTCDMRLAKNAQERH*DPGTPR Trigger: ACGTGGTGTCCCGGGATCCCAGTGTCTTTCCTGAGC...GTTCTTGGCCAGTCTCATGTCACATGTCACGATGTCAGATTCAACAGGAGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS-3UTR GCA 90 bp | CAGAGTTCTCCTGTTGAATCTGACATCGTGACATGTGACATGAGACTGGCCAAGTTGCATCTCCAGTTCTaGAATCCTCCGACCCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: QSSPVESDIVTCDMRLAKLHLQF*NPPTQA Trigger: TGCCTGGGTCGGAGGATTGCAGAACTGGAGATGCAA...CTTGGCCAGTCTCATGTCACATGTCACGATGTCAGATTCAACAGGAGAACTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS-3UTR CCA 90 bp | GCCAGACATTTGGTGTCTATAGGAAGGGCACAGAGTTCTCCTGTTGAATCTGACGGGCTCTTTGAAAGGTaGTACAGGGCCCATGTCAGT | + |
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Preference number: 4 (lower is better) Translates to: ARHLVSIGRAQSSPVESDGLFER*YRAHVS Trigger: ACTGACATGGGCCCTGTACCACCTTTCAAAGAGCCC...GTCAGATTCAACAGGAGAACTCTGTGCCCTTCCTATAGACACCAAATGTCTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS-3UTR CCA 90 bp | AGTTCTCCTGTTGAATCTGACATCGTGACATGTGACATGAGACTGGCCAAGAACGAGGCTGGAAGCTGTTaGGCTCAGGAAAGACACTGG | + |
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Preference number: 4 (lower is better) Translates to: SSPVESDIVTCDMRLAKNEAGSC*AQERHW Trigger: CCAGTGTCTTTCCTGAGCCCAACAGCTTCCAGCCTC...GTTCTTGGCCAGTCTCATGTCACATGTCACGATGTCAGATTCAACAGGAGAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS-3UTR CCA 90 bp | CCAAGGACTGTTATTATAAGGTGCTCTGCTGTCTTAAGTGGGTGCTGCTCAGTACACTTGCTCCAAGAGTaGGGCACTAGCCAGATTCAC | + |
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Preference number: 4 (lower is better) Translates to: PRTVIIRCSAVLSGCCSVHLLQE*GTSQIH Trigger: GTGAATCTGGCTAGTGCCCCACTCTTGGAGCAAGTG...TACTGAGCAGCACCCACTTAAGACAGCAGAGCACCTTATAATAACAGTCCTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| 3UTR CAA 72 bp | AAGTGGGTGCTGCTCAGTAGAGATTGTGCCAGACATTaGGTGTCTATAGGAAGGGCACAGAGTTCTCCTGTT | + |
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Preference number: 4 (lower is better) Translates to: KWVLLSRDCARH*VSIGRAQSSPV Trigger: AACAGGAGAACTCTGTGCCCTTCCTATAGACACCAAATGTCTGGCACAATCTCTACTGAGCAGCACCCACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS-3UTR CCA 90 bp | CTCAGTAGAGATTGTGCCAGACATTTGGTGTCTATAGGAAGGGCACAGAGTTCTCCAGTTTCCTGTAGCTaGGCTTTTAGCTCCTGGACT | + |
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Preference number: 4 (lower is better) Translates to: LSRDCARHLVSIGRAQSSPVSCS*AFSSWT Trigger: AGTCCAGGAGCTAAAAGCCCAGCTACAGGAAACTGG...AGAACTCTGTGCCCTTCCTATAGACACCAAATGTCTGGCACAATCTCTACTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS-3UTR GCA 90 bp | CTGCTCAGTAGAGATTGTGCCAGACATTTGGTGTCTATAGGAAGGGCACAGAGTCTCTTATTGGGTACTTaGCCTCCTGTCTCATCACTT | + |
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Preference number: 4 (lower is better) Translates to: LLSRDCARHLVSIGRAQSLLLGT*PPVSSL Trigger: AAGTGATGAGACAGGAGGGCAAGTACCCAATAAGAG...ACTCTGTGCCCTTCCTATAGACACCAAATGTCTGGCACAATCTCTACTGAGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS-3UTR GCA 90 bp | CTCAGTAGAGATTGTGCCAGACATTTGGTGTCTATAGGAAGGGCACAGAGTTCTCCATTGCTCTCCTTGTaGGATGAAGATCCCATAGGT | + |
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Preference number: 4 (lower is better) Translates to: LSRDCARHLVSIGRAQSSPLLSL*DEDPIG Trigger: ACCTATGGGATCTTCATCGCACAAGGAGAGCAATGG...AGAACTCTGTGCCCTTCCTATAGACACCAAATGTCTGGCACAATCTCTACTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS-3UTR CCA 90 bp | CTCAGTAGAGATTGTGCCAGACATTTGGTGTCTATAGGAAGGGCACAGAGTTCTACATTGGACCATACTTaGTCTTGTTCAGCACCTGGA | + |
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Preference number: 4 (lower is better) Translates to: LSRDCARHLVSIGRAQSSTLDHT*SCSAPG Trigger: TCCAGGTGCTGAACAAGACCAAGTATGGTCCAATGT...AGAACTCTGTGCCCTTCCTATAGACACCAAATGTCTGGCACAATCTCTACTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS-3UTR CCA 90 bp | AGTTCTCCTGTTGAATCTGACATCGTGACATGTGACATGAGACTGGCCAAGAACGGAGGTTGTCCACATTaGACCATACTTGGTCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: SSPVESDIVTCDMRLAKNGGCPH*TILGLV Trigger: AACAAGACCAAGTATGGTCCAATGTGGACAACCTCC...GTTCTTGGCCAGTCTCATGTCACATGTCACGATGTCAGATTCAACAGGAGAACT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS-3UTR GCA 90 bp | AGTTCTCCTGTTGAATCTGACATCGTGACATGTGACATGAGACTGGCCAAGAACGTTCTGGAACATGATTaGAACAGATCTGATGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: SSPVESDIVTCDMRLAKNVLEHD*NRSDEG Trigger: GCCTTCATCAGATCTGTTGCAATCATGTTCCAGAAC...GTTCTTGGCCAGTCTCATGTCACATGTCACGATGTCAGATTCAACAGGAGAACT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS-3UTR TCA 90 bp | TTTAAATCATACCCAAGGACTGTTATTATAAGGTGCTCTGCTGTCTTAAGTGGGCAAACAGGATATAGGTaGTGGCTTCCAAGGCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: FKSYPRTVIIRCSAVLSGQTGYR*WLPRQG Trigger: ACCTTGCCTTGGAAGCCATCACCTATATCCTGTTTG...CCCACTTAAGACAGCAGAGCACCTTATAATAACAGTCCTTGGGTATGATTTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS-3UTR GCA 90 bp | TTTAAATCATACCCAAGGACTGTTATTATAAGGTGCTCTGCTGTCTTAAGTGGGCTTGACAGCATCAGTTaGATCTCCAGTTCTGCAATC | + |
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Preference number: 4 (lower is better) Translates to: FKSYPRTVIIRCSAVLSGLDSIS*ISSSAI Trigger: GATTGCAGAACTGGAGATGCAACTGATGCTGTCAAG...CCCACTTAAGACAGCAGAGCACCTTATAATAACAGTCCTTGGGTATGATTTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS TCA 90 bp | CCGGTCCCCGGAAGCTCCGCCGGACTCCGCAGGCGCGGCCGGTCTTaGCCTGTTCCTGGACCCTCCGTACTCTCCTGTGCCTGGAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: PVPGSSAGLRRRGRS*PVPGPSVLSCAWRA Trigger: AGCCCTCCAGGCACAGGAGAGTACGGAGGGTCCAGGAACAGGTCAAGACCGGCCGCGCCTGCGGAGTCCGGCGGAGCTTCCGGGGACCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS CCA 90 bp | CTGGACCCTCCGTACTCTCCTGTGCCTGGAGGGCTGCAGGGATCGTaGCCTTGGCTCTGGCCCCTTGTGGGCAGAGGCCACGGCCCACCA | + |
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Preference number: 5 (lower is better) Translates to: LDPPYSPVPGGLQGS*PWLWPLVGRGHGPP Trigger: TGGTGGGCCGTGGCCTCTGCCCACAAGGGGCCAGAGCCAAGGCCACGATCCCTGCAGCCCTCCAGGCACAGGAGAGTACGGAGGGTCCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS GCA 90 bp | GCGCGGCCGGTCTTGACCTGTTCCTGGACCCTCCGTACTCTCCTGTaGCTGGAGGGCTGCAGGGATCGTGGCCTTGGCTCTGGCCCCTTG | + |
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Preference number: 5 (lower is better) Translates to: ARPVLTCSWTLRTLL*LEGCRDRGLGSGPL Trigger: CAAGGGGCCAGAGCCAAGGCCACGATCCCTGCAGCCCTCCAGGCACAGGAGAGTACGGAGGGTCCAGGAACAGGTCAAGACCGGCCGCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS GCA 90 bp | TTGACCTGTTCCTGGACCCTCCGTACTCTCCTGTGCCTGGAGGGCTaGAGGGATCGTGGCCTTGGCTCTGGCCCCTTGTGGGCAGAGGCC | + |
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Preference number: 5 (lower is better) Translates to: LTCSWTLRTLLCLEG*RDRGLGSGPLWAEA Trigger: GGCCTCTGCCCACAAGGGGCCAGAGCCAAGGCCACGATCCCTGCAGCCCTCCAGGCACAGGAGAGTACGGAGGGTCCAGGAACAGGTCAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS-3UTR CAA 90 bp | CAAGAACTTCTGTGCCAGGGCTTCTGGACGAGCTCCATGAAGGCGGGAGCCCAGGGATCTCTGGGCTCTTaGAAAGGTGGTACAGGGCCC | + |
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Preference number: 5 (lower is better) Translates to: QELLCQGFWTSSMKAGAQGSLGS*KGGTGP Trigger: GGGCCCTGTACCACCTTTCAAAGAGCCCAGAGATCC...CTGGGCTCCCGCCTTCATGGAGCTCGTCCAGAAGCCCTGGCACAGAAGTTCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS-3UTR CAA 90 bp | CAAGAACTTCTGTGCCAGGGCTTCTGGACGAGCTCCATGAAGGCGGGAGCCCAGTGCAGCCTCACCTTCTaGCTGGGAACCAGGACGATG | + |
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Preference number: 5 (lower is better) Translates to: QELLCQGFWTSSMKAGAQCSLTF*LGTRTM Trigger: CATCGTCCTGGTTCCCAGCAAGAAGGTGAGGCTGCA...CTGGGCTCCCGCCTTCATGGAGCTCGTCCAGAAGCCCTGGCACAGAAGTTCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS TCA 90 bp | GGCAAGGTGGTAGAGAAGATGAGCCATGTCTGGCACCTGGTCCCCTaGTTCACTCTCTGCCCGCACCTGGTCCAGCCGGGTGATAAAGTC | + |
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Preference number: 5 (lower is better) Translates to: GKVVEKMSHVWHLVP*FTLCPHLVQPGDKV Trigger: GACTTTATCACCCGGCTGGACCAGGTGCGGGCAGAGAGTGAATCAGGGGACCAGGTGCCAGACATGGCTCATCTTCTCTACCACCTTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS-3UTR CAA 90 bp | CAAGAACTTCTGTGCCAGGGCTTCTGGACGAGCTCCATGAAGGCGGGAGCCCAGACACCAGTCACTTCCTaGTGCAAGGCCTCCTGGATC | + |
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Preference number: 5 (lower is better) Translates to: QELLCQGFWTSSMKAGAQTPVTS*CKASWI Trigger: GATCCAGGAGGCCTTGCACAAGGAAGTGACTGGTGT...CTGGGCTCCCGCCTTCATGGAGCTCGTCCAGAAGCCCTGGCACAGAAGTTCTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS CCA 90 bp | TATCAGCCTCTTTCTTCCTCAGCCATCGGTGAGGCTGGAAGCTGTTaGGCTCAGGAAAGACACTGGGATCCCGGGACACCACGTAGTGGC | + |
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Preference number: 5 (lower is better) Translates to: YQPLSSSAIGEAGSC*AQERHWDPGTPRSG Trigger: GCCACTACGTGGTGTCCCGGGATCCCAGTGTCTTTCCTGAGCCCAACAGCTTCCAGCCTCACCGATGGCTGAGGAAGAAAGAGGCTGATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS TCA 90 bp | TGTAGGATCCCAGGGTTATCAGCCTCTTTCTTCCTCAGCCATCGGTaGGGCTGGAAGCTGTTGGGCTCAGGAAAGACACTGGGATCCCGG | + |
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Preference number: 5 (lower is better) Translates to: CRIPGLSASFFLSHR*GWKLLGSGKTLGSR Trigger: CCGGGATCCCAGTGTCTTTCCTGAGCCCAACAGCTTCCAGCCTCACCGATGGCTGAGGAAGAAAGAGGCTGATAACCCTGGGATCCTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS GCA 90 bp | TCTGCAGAAAATGCAGCCTCACCTTCTTGCTGGGAACCAGGACGATaGGGGACACAGTCTTTACTTCTCCCATCCCGGGAGCCAGGGCAA | + |
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Preference number: 5 (lower is better) Translates to: SAENAASPSCWEPGR*GTQSLLLPSREPGQ Trigger: TTGCCCTGGCTCCCGGGATGGGAGAAGTAAAGACTGTGTCCCGCATCGTCCTGGTTCCCAGCAAGAAGGTGAGGCTGCATTTTCTGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS CCA 90 bp | GCCATGTCTGGCACCTGGTCCCCTGATTCACTCTCTGCCCGCACCTaGTCCAGCCGGGTGATAAAGTCACTGATAACCTCGTTTAAGGCA | + |
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Preference number: 5 (lower is better) Translates to: AMSGTWSPDSLSART*SSRVIKSLITSFKA Trigger: TGCCTTAAACGAGGTTATCAGTGACTTTATCACCCGGCTGGACCAGGTGCGGGCAGAGAGTGAATCAGGGGACCAGGTGCCAGACATGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS-3UTR CAA 90 bp | CAGAGTTCTCCTGTTGAATCTGACATCGTGACATGTGACATGAGACTGGCCAAGGCAGGGATCGTGGCCTaGGCTCTGGCCCCTTGTGGG | + |
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Preference number: 5 (lower is better) Translates to: QSSPVESDIVTCDMRLAKAGIVA*ALAPCG Trigger: CCCACAAGGGGCCAGAGCCAAGGCCACGATCCCTGC...CTTGGCCAGTCTCATGTCACATGTCACGATGTCAGATTCAACAGGAGAACTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS-3UTR CAA 90 bp | GACTGGCCAAGAACTTCTGTGCCAGGGCTTCTGGACGAGCTCCATGAAGGCGGGAGGAGGTTGTCCACATaGGACCATACTTGGTCTTGT | + |
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Preference number: 5 (lower is better) Translates to: DWPRTSVPGLLDELHEGGRRLST*DHTWSC Trigger: ACAAGACCAAGTATGGTCCAATGTGGACAACCTCCT...CCCGCCTTCATGGAGCTCGTCCAGAAGCCCTGGCACAGAAGTTCTTGGCCAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS GCA 90 bp | TCCTTAATCACAGCTTTTAGCAGAGGCATGTGGGCAAAGTCCTTGTaGTGGGGCACCTTCCCGAAGGGCACCACACCAGTCACTTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: SLITAFSRGMWAKSL*WGTFPKGTTPVTSL Trigger: CAAGGAAGTGACTGGTGTGGTGCCCTTCGGGAAGGTGCCCCAGCACAAGGACTTTGCCCACATGCCTCTGCTAAAAGCTGTGATTAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS CCA 90 bp | TTAATCACAGCTTTTAGCAGAGGCATGTGGGCAAAGTCCTTGTGCTaGGGCACCTTCCCGAAGGGCACCACACCAGTCACTTCCTTGTGC | + |
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Preference number: 5 (lower is better) Translates to: LITAFSRGMWAKSLC*GTFPKGTTPVTSLC Trigger: GCACAAGGAAGTGACTGGTGTGGTGCCCTTCGGGAAGGTGCCCCAGCACAAGGACTTTGCCCACATGCCTCTGCTAAAAGCTGTGATTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS CCA 90 bp | TCAGCCATCGGTGAGGCTGGAAGCTGTTGGGCTCAGGAAAGACACTaGGATCCCGGGACACCACGTAGTGGCATAACACAAACTGTGTAT | + |
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Preference number: 5 (lower is better) Translates to: SAIGEAGSCWAQERH*DPGTPRSGITQTVY Trigger: ATACACAGTTTGTGTTATGCCACTACGTGGTGTCCCGGGATCCCAGTGTCTTTCCTGAGCCCAACAGCTTCCAGCCTCACCGATGGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS TCA 90 bp | CAGCCAAAAGCAGCTCAGGAAAGGTGCCGATGGTCTCCTGAGTACTaGGCAATTCATTGGTCAGCAGGAAGTGCAGGTAGCCAGATACCC | + |
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Preference number: 5 (lower is better) Translates to: QPKAAQERCRWSPEY*AIHWSAGSAGSQIP Trigger: GGGTATCTGGCTACCTGCACTTCCTGCTGACCAATGAATTGCTCAGTACTCAGGAGACCATCGGCACCTTTCCTGAGCTGCTTTTGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS-3UTR CAA 90 bp | CTGCTCAGTAGAGATTGTGCCAGACATTTGGTGTCTATAGGAAGGGCACAGAGTATGTGGGCAAAGTCCTaGTGCTGGGGCACCTTCCCG | + |
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Preference number: 5 (lower is better) Translates to: LLSRDCARHLVSIGRAQSMWAKS*CWGTFP Trigger: CGGGAAGGTGCCCCAGCACAAGGACTTTGCCCACAT...ACTCTGTGCCCTTCCTATAGACACCAAATGTCTGGCACAATCTCTACTGAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS CCA 90 bp | CATTGGTGTAAGTCCCAAAGGAGGTTGTCCACATTGGACCATACTTaGTCTTGTTCAGCACCTGGAGGTCGGGCAAGTGCAGCACATAGC | + |
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Preference number: 5 (lower is better) Translates to: HWCKSQRRLSTLDHT*SCSAPGGRASAAHS Trigger: GCTATGTGCTGCACTTGCCCGACCTCCAGGTGCTGAACAAGACCAAGTATGGTCCAATGTGGACAACCTCCTTTGGGACTTACACCAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS-3UTR CAA 90 bp | CAGAGTTCTCCTGTTGAATCTGACATCGTGACATGTGACATGAGACTGGCCAAGGCCCATGTCAGTGTGTaGGATGTCGTGTCCACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: QSSPVESDIVTCDMRLAKAHVSV*DVVSTP Trigger: TGGGGTGGACACGACATCCAACACACTGACATGGGC...CTTGGCCAGTCTCATGTCACATGTCACGATGTCAGATTCAACAGGAGAACTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS CCA 90 bp | AGCCAGATTCACATTGGTGTAAGTCCCAAAGGAGGTTGTCCACATTaGACCATACTTGGTCTTGTTCAGCACCTGGAGGTCGGGCAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SQIHIGVSPKGGCPH*TILGLVQHLEVGQV Trigger: CACTTGCCCGACCTCCAGGTGCTGAACAAGACCAAGTATGGTCCAATGTGGACAACCTCCTTTGGGACTTACACCAATGTGAATCTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS TCA 90 bp | GGGCAGCAGAGGACGCGTCCATTTGGGAAGGAAAGTGATATAGACTaGGTTCTGGAACATGATTGCAACAGATCTGATGAAGGCGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GQQRTRPFGKESDID*VLEHDCNRSDEGGS Trigger: ACTGCCGCCTTCATCAGATCTGTTGCAATCATGTTCCAGAACTCAGTCTATATCACTTTCCTTCCCAAATGGACGCGTCCTCTGCTGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS-3UTR CAA 90 bp | CCAAGGACTGTTATTATAAGGTGCTCTGCTGTCTTAAGTGGGTGCTGCTCAGTACACATTGGACCATACTaGGTCTTGTTCAGCACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PRTVIIRCSAVLSGCCSVHIGPY*VLFSTW Trigger: CCAGGTGCTGAACAAGACCAAGTATGGTCCAATGTG...TACTGAGCAGCACCCACTTAAGACAGCAGAGCACCTTATAATAACAGTCCTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS-3UTR CAA 90 bp | CCAAGGACTGTTATTATAAGGTGCTCTGCTGTCTTAAGTGGGTGCTGCTCAGTAAAGTCCCAAAGGAGGTaGTCCACATTGGACCATACT | + |
|
Preference number: 5 (lower is better) Translates to: PRTVIIRCSAVLSGCCSVKSQRR*STLDHT Trigger: AGTATGGTCCAATGTGGACAACCTCCTTTGGGACTT...TACTGAGCAGCACCCACTTAAGACAGCAGAGCACCTTATAATAACAGTCCTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS-3UTR CAA 90 bp | AGTAGAGATTGTGCCAGACATTTGGTGTCTATAGGAAGGGCACAGAGTTCTCCTACAAACTGTGTATTCTaGGGGAAGAGAAAGCCATTA | + |
|
Preference number: 5 (lower is better) Translates to: SRDCARHLVSIGRAQSSPTNCVF*GKRKPL Trigger: TAATGGCTTTCTCTTCCCCAAGAATACACAGTTTGT...AGGAGAACTCTGTGCCCTTCCTATAGACACCAAATGTCTGGCACAATCTCTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS CAA 72 bp | GAGGGCTGCAGGGATCGTGGCCTTGGCTCTGGCCCCTaGTGGGCAGAGGCCACGGCCCACCACACGCGGGTC | + |
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Preference number: 6 (lower is better) Translates to: EGCRDRGLGSGP*WAEATAHHTRV Trigger: GACCCGCGTGTGGTGGGCCGTGGCCTCTGCCCACAAGGGGCCAGAGCCAAGGCCACGATCCCTGCAGCCCTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS CAA 90 bp | CTGTGCCTGGAGGGCTGCAGGGATCGTGGCCTTGGCTCTGGCCCCTaGTGGGCAGAGGCCACGGCCCACCACACGCGGGTCCAGGAGCGT | + |
|
Preference number: 6 (lower is better) Translates to: LCLEGCRDRGLGSGP*WAEATAHHTRVQER Trigger: ACGCTCCTGGACCCGCGTGTGGTGGGCCGTGGCCTCTGCCCACAAGGGGCCAGAGCCAAGGCCACGATCCCTGCAGCCCTCCAGGCACAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS CAA 90 bp | TCCGGTCCCCGGAAGCTCCGCCGGACTCCGCAGGCGCGGCCGGTCTaGACCTGTTCCTGGACCCTCCGTACTCTCCTGTGCCTGGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SGPRKLRRTPQARPV*TCSWTLRTLLCLEG Trigger: GCCCTCCAGGCACAGGAGAGTACGGAGGGTCCAGGAACAGGTCAAGACCGGCCGCGCCTGCGGAGTCCGGCGGAGCTTCCGGGGACCGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS CAA 72 bp | CGGAAGCTCCGCCGGACTCCGCAGGCGCGGCCGGTCTaGACCTGTTCCTGGACCCTCCGTACTCTCCTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: RKLRRTPQARPV*TCSWTLRTLLC Trigger: GCACAGGAGAGTACGGAGGGTCCAGGAACAGGTCAAGACCGGCCGCGCCTGCGGAGTCCGGCGGAGCTTCCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS CCA 72 bp | CCGTACTCTCCTGTGCCTGGAGGGCTGCAGGGATCGTaGCCTTGGCTCTGGCCCCTTGTGGGCAGAGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: PYSPVPGGLQGS*PWLWPLVGRGH Trigger: GTGGCCTCTGCCCACAAGGGGCCAGAGCCAAGGCCACGATCCCTGCAGCCCTCCAGGCACAGGAGAGTACGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS GCA 72 bp | TCCTGGACCCTCCGTACTCTCCTGTGCCTGGAGGGCTaGAGGGATCGTGGCCTTGGCTCTGGCCCCTTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SWTLRTLLCLEG*RDRGLGSGPLW Trigger: CCACAAGGGGCCAGAGCCAAGGCCACGATCCCTGCAGCCCTCCAGGCACAGGAGAGTACGGAGGGTCCAGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS GCA 72 bp | GTCTTGACCTGTTCCTGGACCCTCCGTACTCTCCTGTaGCTGGAGGGCTGCAGGGATCGTGGCCTTGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: VLTCSWTLRTLL*LEGCRDRGLGS Trigger: AGAGCCAAGGCCACGATCCCTGCAGCCCTCCAGGCACAGGAGAGTACGGAGGGTCCAGGAACAGGTCAAGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS CCA 72 bp | GGCACCTGGTCCCCTGATTCACTCTCTGCCCGCACCTaGTCCAGCCGGGTGATAAAGTCACTGATAACCTCG | + |
|
Preference number: 6 (lower is better) Translates to: GTWSPDSLSART*SSRVIKSLITS Trigger: CGAGGTTATCAGTGACTTTATCACCCGGCTGGACCAGGTGCGGGCAGAGAGTGAATCAGGGGACCAGGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS CCA 72 bp | CTTTCTTCCTCAGCCATCGGTGAGGCTGGAAGCTGTTaGGCTCAGGAAAGACACTGGGATCCCGGGACACCA | + |
|
Preference number: 6 (lower is better) Translates to: LSSSAIGEAGSC*AQERHWDPGTP Trigger: TGGTGTCCCGGGATCCCAGTGTCTTTCCTGAGCCCAACAGCTTCCAGCCTCACCGATGGCTGAGGAAGAAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS GCA 72 bp | AATGCAGCCTCACCTTCTTGCTGGGAACCAGGACGATaGGGGACACAGTCTTTACTTCTCCCATCCCGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: NAASPSCWEPGR*GTQSLLLPSRE Trigger: CTCCCGGGATGGGAGAAGTAAAGACTGTGTCCCGCATCGTCCTGGTTCCCAGCAAGAAGGTGAGGCTGCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS CCA 72 bp | GGTGAGGCTGGAAGCTGTTGGGCTCAGGAAAGACACTaGGATCCCGGGACACCACGTAGTGGCATAACACAA | + |
|
Preference number: 6 (lower is better) Translates to: GEAGSCWAQERH*DPGTPRSGITQ Trigger: TTGTGTTATGCCACTACGTGGTGTCCCGGGATCCCAGTGTCTTTCCTGAGCCCAACAGCTTCCAGCCTCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS CAA 90 bp | GTCTCCTTAATCACAGCTTTTAGCAGAGGCATGTGGGCAAAGTCCTaGTGCTGGGGCACCTTCCCGAAGGGCACCACACCAGTCACTTCC | + |
|
Preference number: 6 (lower is better) Translates to: VSLITAFSRGMWAKS*CWGTFPKGTTPVTS Trigger: GGAAGTGACTGGTGTGGTGCCCTTCGGGAAGGTGCCCCAGCACAAGGACTTTGCCCACATGCCTCTGCTAAAAGCTGTGATTAAGGAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS TCA 72 bp | GCCTCGTCAGGCTTCAGCAGCCTCTGTTTCAAAGCCTaGCGCAGATGGTACCATTGCTCTCCTTGTGCGATG | + |
|
Preference number: 6 (lower is better) Translates to: ASSGFSSLCFKA*RRWYHCSPCAM Trigger: CATCGCACAAGGAGAGCAATGGTACCATCTGCGTCAGGCTTTGAAACAGAGGCTGCTGAAGCCTGACGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS TCA 72 bp | CCAGGGTTATCAGCCTCTTTCTTCCTCAGCCATCGGTaGGGCTGGAAGCTGTTGGGCTCAGGAAAGACACTG | + |
|
Preference number: 6 (lower is better) Translates to: PGLSASFFLSHR*GWKLLGSGKTL Trigger: CAGTGTCTTTCCTGAGCCCAACAGCTTCCAGCCTCACCGATGGCTGAGGAAGAAAGAGGCTGATAACCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS CAA 90 bp | CCTTGTGGTCTCGGTGGTCCTTCCACTGATCCATGTGGTCTCTTATaGGGTACTTGCCCTCCTGTCTCATCACTTGCTCCAAGAGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: PCGLGGPSTDPCGLL*GTCPPVSSLAPRVG Trigger: CCCCACTCTTGGAGCAAGTGATGAGACAGGAGGGCAAGTACCCAATAAGAGACCACATGGATCAGTGGAAGGACCACCGAGACCACAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS TCA 72 bp | GCAGCTCAGGAAAGGTGCCGATGGTCTCCTGAGTACTaGGCAATTCATTGGTCAGCAGGAAGTGCAGGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: AAQERCRWSPEY*AIHWSAGSAGS Trigger: GCTACCTGCACTTCCTGCTGACCAATGAATTGCTCAGTACTCAGGAGACCATCGGCACCTTTCCTGAGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS CCA 72 bp | AGGGTCTCCTTAATCACAGCTTTTAGCAGAGGCATGTaGGCAAAGTCCTTGTGCTGGGGCACCTTCCCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: RVSLITAFSRGM*AKSLCWGTFPK Trigger: CTTCGGGAAGGTGCCCCAGCACAAGGACTTTGCCCACATGCCTCTGCTAAAAGCTGTGATTAAGGAGACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS CAA 72 bp | CCAAAGGAGGTTGTCCACATTGGACCATACTTGGTCTaGTTCAGCACCTGGAGGTCGGGCAAGTGCAGCACA | + |
|
Preference number: 6 (lower is better) Translates to: PKEVVHIGPYLV*FSTWRSGKCST Trigger: TGTGCTGCACTTGCCCGACCTCCAGGTGCTGAACAAGACCAAGTATGGTCCAATGTGGACAACCTCCTTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS CAA 72 bp | CTCTTTGAAAGGTGGTACAGGGCCCATGTCAGTGTGTaGGATGTCGTGTCCACCCCAGCCAAAAGCAGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LFERWYRAHVSV*DVVSTPAKSSS Trigger: TGAGCTGCTTTTGGCTGGGGTGGACACGACATCCAACACACTGACATGGGCCCTGTACCACCTTTCAAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS TCA 72 bp | GCCAAAAGCAGCTCAGGAAAGGTGCCGATGGTCTCCTaGGTACTGAGCAATTCATTGGTCAGCAGGAAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: AKSSSGKVPMVS*VLSNSLVSRKC Trigger: GCACTTCCTGCTGACCAATGAATTGCTCAGTACTCAGGAGACCATCGGCACCTTTCCTGAGCTGCTTTTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS CCA 72 bp | AAGTCCCAAAGGAGGTTGTCCACATTGGACCATACTTaGTCTTGTTCAGCACCTGGAGGTCGGGCAAGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: KSQRRLSTLDHT*SCSAPGGRASA Trigger: TGCACTTGCCCGACCTCCAGGTGCTGAACAAGACCAAGTATGGTCCAATGTGGACAACCTCCTTTGGGACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS CAA 72 bp | CTCGGTGGTCCTTCCACTGATCCATGTGGTCTCTTATaGGGTACTTGCCCTCCTGTCTCATCACTTGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LGGPSTDPCGLL*GTCPPVSSLAP Trigger: TGGAGCAAGTGATGAGACAGGAGGGCAAGTACCCAATAAGAGACCACATGGATCAGTGGAAGGACCACCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS CAA 72 bp | CGGGAGCCAGGGCAATCTCATACTTCTGTACCAGCCTaGACAGCATCAGTTGCATCTCCAGTTCTGCAATCC | + |
|
Preference number: 6 (lower is better) Translates to: REPGQSHTSVPA*TASVASPVLQS Trigger: GGATTGCAGAACTGGAGATGCAACTGATGCTGTCAAGGCTGGTACAGAAGTATGAGATTGCCCTGGCTCCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS TCA 72 bp | GGGAGCCAGGGCAATCTCATACTTCTGTACCAGCCTTaGCAGCATCAGTTGCATCTCCAGTTCTGCAATCCT | + |
|
Preference number: 6 (lower is better) Translates to: GSQGNLILLYQP*QHQLHLQFCNP Trigger: AGGATTGCAGAACTGGAGATGCAACTGATGCTGTCAAGGCTGGTACAGAAGTATGAGATTGCCCTGGCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS CCA 72 bp | GATACCCGGACTCCATCTGGCCCAGTTTCCTGTAGCTaGGCTTTTAGCTCCTGGACTTTTTCATCAATCAGC | + |
|
Preference number: 6 (lower is better) Translates to: DTRTPSGPVSCS*AFSSWTFSSIS Trigger: GCTGATTGATGAAAAAGTCCAGGAGCTAAAAGCCCAGCTACAGGAAACTGGGCCAGATGGAGTCCGGGTATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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| CDS CCA 72 bp | CACATTGGTGTAAGTCCCAAAGGAGGTTGTCCACATTaGACCATACTTGGTCTTGTTCAGCACCTGGAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: HIGVSPKGGCPH*TILGLVQHLEV Trigger: GACCTCCAGGTGCTGAACAAGACCAAGTATGGTCCAATGTGGACAACCTCCTTTGGGACTTACACCAATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027356.7 |
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