RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CYP26C1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000062432

Ensembl transcript IDs: ENSMUST00000073391.5

Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp GCCAGCTCCCAGCGCGCGGTGCGCACCAGCTCGACTGCGAGCAGTTaGAGCACCGCCTGCGCTAGCTCCTGCCCCAGGCAGCTGCGCGCG +
Preference number: 5 (lower is better)
Translates to: ASSQRAVRTSSTASS*STACASSCPRQLRA
Trigger: CGCGCGCAGCTGCCTGGGGCAGGAGCTAGCGCAGGCGGTGCTGCAACTGCTCGCAGTCGAGCTGGTGCGCACCGCGCGCTGGGAGCTGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS TCA 90 bp GGCCAGGCTAAGGTCCGGCTCACAACCGCAGTCCGGTGGCGATCCTaGGGCTCTGGGTGTGCAAGTGCACGCGCGCCCCAGGCCCTGCGC +
Preference number: 5 (lower is better)
Translates to: GQAKVRLTTAVRWRS*GSGCASARAPQALR
Trigger: GCGCAGGGCCTGGGGCGCGCGTGCACTTGCACACCCAGAGCCTCAGGATCGCCACCGGACTGCGGTTGTGAGCCGGACCTTAGCCTGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS GCA 90 bp CGAGCAGTTGCAGCACCGCCTGCGCTAGCTCCTGCCCCAGGCAGCTaGGCGCGCCGCCGCCGAACGGGATGTAATGAAAGCGGCCACCGG +
Preference number: 5 (lower is better)
Translates to: RAVAAPPALAPAPGS*ARRRRTGCNESGHR
Trigger: CCGGTGGCCGCTTTCATTACATCCCGTTCGGCGGCGGCGCGCGCAGCTGCCTGGGGCAGGAGCTAGCGCAGGCGGTGCTGCAACTGCTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS CCA 90 bp GGCGCACCAGGAGCGCACCTCTCGCCGCAGCGCCCCCTGCAACCGTaGCACGAATTGCTCCAGAGAGGAGCGGCTGAACACGCGCGCCAG +
Preference number: 5 (lower is better)
Translates to: GAPGAHLSPQRPLQP*HELLQRGAAEHARQ
Trigger: CTGGCGCGCGTGTTCAGCCGCTCCTCTCTGGAGCAATTCGTGCCACGGTTGCAGGGGGCGCTGCGGCGAGAGGTGCGCTCCTGGTGCGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS GCA 90 bp CGTTGGGCGGCGCACCAGGAGCGCACCTCTCGCCGCAGCGCCCCCTaGAACCGTGGCACGAATTGCTCCAGAGAGGAGCGGCTGAACACG +
Preference number: 5 (lower is better)
Translates to: RWAAHQERTSRRSAP*NRGTNCSREERLNT
Trigger: CGTGTTCAGCCGCTCCTCTCTGGAGCAATTCGTGCCACGGTTGCAGGGGGCGCTGCGGCGAGAGGTGCGCTCCTGGTGCGCCGCCCAACG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS GCA 90 bp CCGGCTCACAACCGCAGTCCGGTGGCGATCCTGAGGCTCTGGGTGTaGAAGTGCACGCGCGCCCCAGGCCCTGCGCTGACAGCTCCTGCT +
Preference number: 5 (lower is better)
Translates to: PAHNRSPVAILRLWV*KCTRAPGPALTAPA
Trigger: AGCAGGAGCTGTCAGCGCAGGGCCTGGGGCGCGCGTGCACTTGCACACCCAGAGCCTCAGGATCGCCACCGGACTGCGGTTGTGAGCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS CCA 90 bp CCGGGTGCACGATGGGCACCGTCTGCATTACGGGGAAGGCAGGTGTaGCCAGCTCCCAGCGCGCGGTGCGCACCAGCTCGACTGCGAGCA +
Preference number: 5 (lower is better)
Translates to: PGARWAPSALRGRQV*PAPSARCAPARLRA
Trigger: TGCTCGCAGTCGAGCTGGTGCGCACCGCGCGCTGGGAGCTGGCCACACCTGCCTTCCCCGTAATGCAGACGGTGCCCATCGTGCACCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS TCA 90 bp TGCGGTAGCCCCCGGACACCGGCGGTAGGAGGCGCAGCACCTCCTTaGCTACGCAGTCGACGTAGCGCAAACGGCCCAGCATGGCCAGGC +
Preference number: 5 (lower is better)
Translates to: CGSPRTPAVGGAAPP*LRSRRSANGPAWPG
Trigger: GCCTGGCCATGCTGGGCCGTTTGCGCTACGTCGACTGCGTAGTCAAGGAGGTGCTGCGCCTCCTACCGCCGGTGTCCGGGGGCTACCGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS GCA 90 bp GAGCGCACCTCTCGCCGCAGCGCCCCCTGCAACCGTGGCACGAATTaGTCCAGAGAGGAGCGGCTGAACACGCGCGCCAGGACCTTACGC +
Preference number: 5 (lower is better)
Translates to: ERTSRRSAPCNRGTN*SREERLNTRARTLR
Trigger: GCGTAAGGTCCTGGCGCGCGTGTTCAGCCGCTCCTCTCTGGAGCAATTCGTGCCACGGTTGCAGGGGGCGCTGCGGCGAGAGGTGCGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS GCA 90 bp CAGCTGCAGACCCAGCAGGATGCGCGCGGCCATGCGGAAGGTGAGTaGTTTGGCCGCCTGGTAAACAGCCACCGGTCGTTGGGCGGCGCA +
Preference number: 5 (lower is better)
Translates to: QLQTQQDARGHAEGE*FGRLVNSHRSLGGA
Trigger: TGCGCCGCCCAACGACCGGTGGCTGTTTACCAGGCGGCCAAAGCACTCACCTTCCGCATGGCCGCGCGCATCCTGCTGGGTCTGCAGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS GCA 90 bp TCTGCATTACGGGGAAGGCAGGTGTGGCCAGCTCCCAGCGCGCGGTaGGCACCAGCTCGACTGCGAGCAGTTGCAGCACCGCCTGCGCTA +
Preference number: 5 (lower is better)
Translates to: SALRGRQVWPAPSAR*APARLRAVAAPPAL
Trigger: TAGCGCAGGCGGTGCTGCAACTGCTCGCAGTCGAGCTGGTGCGCACCGCGCGCTGGGAGCTGGCCACACCTGCCTTCCCCGTAATGCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS CCA 90 bp AGAGTTGTTGGGCCAGGCCGAGCAGCAGACCCGCACACAGGAGAGTaGTGCCGGCAGCCCCCAGCACGGACAAACAGCTCAGCCCCCAGG +
Preference number: 5 (lower is better)
Translates to: RVVGPGRAADPHTGE*CRQPPARTNSSAPR
Trigger: CCTGGGGGCTGAGCTGTTTGTCCGTGCTGGGGGCTGCCGGCACCACTCTCCTGTGTGCGGGTCTGCTGCTCGGCCTGGCCCAACAACTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS CCA 90 bp GAGGCCCAATCCCGGCTCAGAGTCCAGCGGAGGGTCCAGAGTTGTTaGGCCAGGCCGAGCAGCAGACCCGCACACAGGAGAGTGGTGCCG +
Preference number: 5 (lower is better)
Translates to: EAQSRLRVQRRVQSC*ARPSSRPAHRRVVP
Trigger: CGGCACCACTCTCCTGTGTGCGGGTCTGCTGCTCGGCCTGGCCCAACAACTCTGGACCCTCCGCTGGACTCTGAGCCGGGATTGGGCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS GCA 90 bp GTTGTTGGGCCAGGCCGAGCAGCAGACCCGCACACAGGAGAGTGGTaGCGGCAGCCCCCAGCACGGACAAACAGCTCAGCCCCCAGGAAA +
Preference number: 5 (lower is better)
Translates to: VVGPGRAADPHTGEW*RQPPARTNSSAPRK
Trigger: TTTCCTGGGGGCTGAGCTGTTTGTCCGTGCTGGGGGCTGCCGGCACCACTCTCCTGTGTGCGGGTCTGCTGCTCGGCCTGGCCCAACAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS GCA 90 bp CACAACCGCAGTCCGGTGGCGATCCTGAGGCTCTGGGTGTGCAAGTaGACGCGCGCCCCAGGCCCTGCGCTGACAGCTCCTGCTGGATTT +
Preference number: 5 (lower is better)
Translates to: HNRSPVAILRLWVCK*TRAPGPALTAPAGF
Trigger: AAATCCAGCAGGAGCTGTCAGCGCAGGGCCTGGGGCGCGCGTGCACTTGCACACCCAGAGCCTCAGGATCGCCACCGGACTGCGGTTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS GCA 90 bp GATCCTGAGGCTCTGGGTGTGCAAGTGCACGCGCGCCCCAGGCCCTaGGCTGACAGCTCCTGCTGGATTTTGGTGATGGCTGCTGGGTGC +
Preference number: 5 (lower is better)
Translates to: DPEALGVQVHARPRP*ADSSCWILVMAAGC
Trigger: GCACCCAGCAGCCATCACCAAAATCCAGCAGGAGCTGTCAGCGCAGGGCCTGGGGCGCGCGTGCACTTGCACACCCAGAGCCTCAGGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS GCA 90 bp CTTTGGGGATCTGGTAACCGTCCAGTTCAAAGGTGCGCAGCGCAGTaGGGTAGCCCCCGGACACCGGCGGTAGGAGGCGCAGCACCTCCT +
Preference number: 5 (lower is better)
Translates to: LWGSGNRPVQRCAAQ*GSPRTPAVGGAAPP
Trigger: AGGAGGTGCTGCGCCTCCTACCGCCGGTGTCCGGGGGCTACCGCACTGCGCTGCGCACCTTTGAACTGGACGGTTACCAGATCCCCAAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS GCA 90 bp TCCAGAGAGGAGCGGCTGAACACGCGCGCCAGGACCTTACGCCGTTaGCGATGGGGCTCACCAACCGCGCCAAGTAGTGTGTGTGACCCT +
Preference number: 5 (lower is better)
Translates to: SREERLNTRARTLRR*RWGSPTAPSSVCDP
Trigger: AGGGTCACACACACTACTTGGCGCGGTTGGTGAGCCCCATCGGCAACGGCGTAAGGTCCTGGCGCGCGTGTTCAGCCGCTCCTCTCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS CCA 90 bp CACCGAAGAATGGCCAGCCCATGGAGCCCTTGGGTAGGGGCAAGGTaGAGGCCCAATCCCGGCTCAGAGTCCAGCGGAGGGTCCAGAGTT +
Preference number: 5 (lower is better)
Translates to: HRRMASPWSPWVGAR*RPNPGSESSGGSRV
Trigger: AACTCTGGACCCTCCGCTGGACTCTGAGCCGGGATTGGGCCTCCACCTTGCCCCTACCCAAGGGCTCCATGGGCTGGCCATTCTTCGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS CCA 90 bp GTGCAAGTGCACGCGCGCCCCAGGCCCTGCGCTGACAGCTCCTGCTaGATTTTGGTGATGGCTGCTGGGTGCTGCAGAAGCAGCAGGATG +
Preference number: 5 (lower is better)
Translates to: VQVHARPRPCADSSC*ILVMAAGCCRSSRM
Trigger: CATCCTGCTGCTTCTGCAGCACCCAGCAGCCATCACCAAAATCCAGCAGGAGCTGTCAGCGCAGGGCCTGGGGCGCGCGTGCACTTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS CCA 90 bp GAAGAGGGTGGAAAAAGAGCAGCAGCCCGTCCACCGGGTGCACGATaGGCACCGTCTGCATTACGGGGAAGGCAGGTGTGGCCAGCTCCC +
Preference number: 5 (lower is better)
Translates to: EEGGKRAAARPPGAR*APSALRGRQVWPAP
Trigger: GGGAGCTGGCCACACCTGCCTTCCCCGTAATGCAGACGGTGCCCATCGTGCACCCGGTGGACGGGCTGCTGCTCTTTTTCCACCCTCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS GCA 90 bp TGTTCAAAGGTATGGGCCAGCTCGGTGCATCGCGCTTCGTCCAGCTaGAGACCCAGCAGGATGCGCGCGGCCATGCGGAAGGTGAGTGCT +
Preference number: 5 (lower is better)
Translates to: CSKVWASSVHRASSS*RPSRMRAAMRKVSA
Trigger: AGCACTCACCTTCCGCATGGCCGCGCGCATCCTGCTGGGTCTGCAGCTGGACGAAGCGCGATGCACCGAGCTGGCCCATACCTTTGAACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS GCA 90 bp GAAGTCGGAAGAGGGTGGAAAAAGAGCAGCAGCCCGTCCACCGGGTaGACGATGGGCACCGTCTGCATTACGGGGAAGGCAGGTGTGGCC +
Preference number: 5 (lower is better)
Translates to: EVGRGWKKSSSPSTG*TMGTVCITGKAGVA
Trigger: GGCCACACCTGCCTTCCCCGTAATGCAGACGGTGCCCATCGTGCACCCGGTGGACGGGCTGCTGCTCTTTTTCCACCCTCTTCCGACTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS CCA 90 bp ACCAGTGCAGCGTTTCACCGAAGAATGGCCAGCCCATGGAGCCCTTaGGTAGGGGCAAGGTGGAGGCCCAATCCCGGCTCAGAGTCCAGC +
Preference number: 5 (lower is better)
Translates to: TSAAFHRRMASPWSP*VGARWRPNPGSESS
Trigger: GCTGGACTCTGAGCCGGGATTGGGCCTCCACCTTGCCCCTACCCAAGGGCTCCATGGGCTGGCCATTCTTCGGTGAAACGCTGCACTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS CCA 90 bp GAGGAGCGGCTGAACACGCGCGCCAGGACCTTACGCCGTTGCCGATaGGGCTCACCAACCGCGCCAAGTAGTGTGTGTGACCCTAGTAGA +
Preference number: 5 (lower is better)
Translates to: EERLNTRARTLRRCR*GSPTAPSSVCDPSR
Trigger: TCTACTAGGGTCACACACACTACTTGGCGCGGTTGGTGAGCCCCATCGGCAACGGCGTAAGGTCCTGGCGCGCGTGTTCAGCCGCTCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS GCA 90 bp GGCTCACCAACCGCGCCAAGTAGTGTGTGTGACCCTAGTAGAATATaGGCACTCTGTGGCCACTGGCTACGCACCAGGCGGTGCTCGCCC +
Preference number: 5 (lower is better)
Translates to: GSPTAPSSVCDPSRI*ALCGHWLRTRRCSP
Trigger: GGGCGAGCACCGCCTGGTGCGTAGCCAGTGGCCACAGAGTGCGCATATTCTACTAGGGTCACACACACTACTTGGCGCGGTTGGTGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS GCA 90 bp AGAAGAGGTTCTCCACCAGCTGTTCAAAGGTATGGGCCAGCTCGGTaGATCGCGCTTCGTCCAGCTGCAGACCCAGCAGGATGCGCGCGG +
Preference number: 5 (lower is better)
Translates to: RRGSPPAVQRYGPAR*IALRPAADPAGCAR
Trigger: CCGCGCGCATCCTGCTGGGTCTGCAGCTGGACGAAGCGCGATGCACCGAGCTGGCCCATACCTTTGAACAGCTGGTGGAGAACCTCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS TCA 90 bp CCGGATGCCCTTGCGCAGGCCGCTGAACGGTACGTCCAAGGGCAGTaGGAAGAGGTTCTCCACCAGCTGTTCAAAGGTATGGGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: PDALAQAAERYVQGQ*EEVLHQLFKGMGQL
Trigger: GAGCTGGCCCATACCTTTGAACAGCTGGTGGAGAACCTCTTCTCACTGCCCTTGGACGTACCGTTCAGCGGCCTGCGCAAGGGCATCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS CCA 90 bp TCCAAGGGCAGTGAGAAGAGGTTCTCCACCAGCTGTTCAAAGGTATaGGCCAGCTCGGTGCATCGCGCTTCGTCCAGCTGCAGACCCAGC +
Preference number: 5 (lower is better)
Translates to: SKGSEKRFSTSCSKV*ASSVHRASSSCRPS
Trigger: GCTGGGTCTGCAGCTGGACGAAGCGCGATGCACCGAGCTGGCCCATACCTTTGAACAGCTGGTGGAGAACCTCTTCTCACTGCCCTTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS CCA 90 bp GCCCAGCTCCCTAGCGCTGTTAATAATCAAGAGCAGGGCATCACCTaGCTCTGCTGTCTGTTTCTCCTGAAGCTTCTCAGCGACGGCCTC +
Preference number: 5 (lower is better)
Translates to: AQLPSAVNNQEQGIT*LCCLFLLKLLSDGL
Trigger: GAGGCCGTCGCTGAGAAGCTTCAGGAGAAACAGACAGCAGAGCCAGGTGATGCCCTGCTCTTGATTATTAACAGCGCTAGGGAGCTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS CCA 90 bp AGGAGCTCTACAGCCAACTCCTTCAGCTCTTGCACTGAGGGCTCGTaGCCCAGCTCCCTAGCGCTGTTAATAATCAAGAGCAGGGCATCA +
Preference number: 5 (lower is better)
Translates to: RSSTANSFSSCTEGS*PSSLALLIIKSRAS
Trigger: TGATGCCCTGCTCTTGATTATTAACAGCGCTAGGGAGCTGGGCCACGAGCCCTCAGTGCAAGAGCTGAAGGAGTTGGCTGTAGAGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS GCA 90 bp CTCCCTAGCGCTGTTAATAATCAAGAGCAGGGCATCACCTGGCTCTaGTGTCTGTTTCTCCTGAAGCTTCTCAGCGACGGCCTCATCCAG +
Preference number: 5 (lower is better)
Translates to: LPSAVNNQEQGITWL*CLFLLKLLSDGLIQ
Trigger: CTGGATGAGGCCGTCGCTGAGAAGCTTCAGGAGAAACAGACAGCAGAGCCAGGTGATGCCCTGCTCTTGATTATTAACAGCGCTAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS TCA 90 bp ATAATCAAGAGCAGGGCATCACCTGGCTCTGCTGTCTGTTTCTCCTaGAGCTTCTCAGCGACGGCCTCATCCAGGTGCTCATACAACTGG +
Preference number: 5 (lower is better)
Translates to: IIKSRASPGSAVCFS*SFSATASSRCSYNW
Trigger: CCAGTTGTATGAGCACCTGGATGAGGCCGTCGCTGAGAAGCTTCAGGAGAAACAGACAGCAGAGCCAGGTGATGCCCTGCTCTTGATTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS GCA 72 bp CAGCGCGCGGTGCGCACCAGCTCGACTGCGAGCAGTTaGAGCACCGCCTGCGCTAGCTCCTGCCCCAGGCAG +
Preference number: 6 (lower is better)
Translates to: QRAVRTSSTASS*STACASSCPRQ
Trigger: CTGCCTGGGGCAGGAGCTAGCGCAGGCGGTGCTGCAACTGCTCGCAGTCGAGCTGGTGCGCACCGCGCGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS CAA 90 bp GCGGAAGGTGAGTGCTTTGGCCGCCTGGTAAACAGCCACCGGTCGTaGGGCGGCGCACCAGGAGCGCACCTCTCGCCGCAGCGCCCCCTG +
Preference number: 6 (lower is better)
Translates to: AEGECFGRLVNSHRS*GGAPGAHLSPQRPL
Trigger: CAGGGGGCGCTGCGGCGAGAGGTGCGCTCCTGGTGCGCCGCCCAACGACCGGTGGCTGTTTACCAGGCGGCCAAAGCACTCACCTTCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS GCA 72 bp GCGCACCAGGAGCGCACCTCTCGCCGCAGCGCCCCCTaGAACCGTGGCACGAATTGCTCCAGAGAGGAGCGG +
Preference number: 6 (lower is better)
Translates to: AHQERTSRRSAP*NRGTNCSREER
Trigger: CCGCTCCTCTCTGGAGCAATTCGTGCCACGGTTGCAGGGGGCGCTGCGGCGAGAGGTGCGCTCCTGGTGCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS GCA 72 bp GCAGCACCGCCTGCGCTAGCTCCTGCCCCAGGCAGCTaGGCGCGCCGCCGCCGAACGGGATGTAATGAAAGC +
Preference number: 6 (lower is better)
Translates to: AAPPALAPAPGS*ARRRRTGCNES
Trigger: GCTTTCATTACATCCCGTTCGGCGGCGGCGCGCGCAGCTGCCTGGGGCAGGAGCTAGCGCAGGCGGTGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS CCA 72 bp GCTCACAACCGCAGTCCGGTGGCGATCCTGAGGCTCTaGGTGTGCAAGTGCACGCGCGCCCCAGGCCCTGCG +
Preference number: 6 (lower is better)
Translates to: AHNRSPVAILRL*VCKCTRAPGPA
Trigger: CGCAGGGCCTGGGGCGCGCGTGCACTTGCACACCCAGAGCCTCAGGATCGCCACCGGACTGCGGTTGTGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS CAA 90 bp GGAGCGCACCTCTCGCCGCAGCGCCCCCTGCAACCGTGGCACGAATaGCTCCAGAGAGGAGCGGCTGAACACGCGCGCCAGGACCTTACG +
Preference number: 6 (lower is better)
Translates to: GAHLSPQRPLQPWHE*LQRGAAEHARQDLT
Trigger: CGTAAGGTCCTGGCGCGCGTGTTCAGCCGCTCCTCTCTGGAGCAATTCGTGCCACGGTTGCAGGGGGCGCTGCGGCGAGAGGTGCGCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS GCA 72 bp TCTCGCCGCAGCGCCCCCTGCAACCGTGGCACGAATTaGTCCAGAGAGGAGCGGCTGAACACGCGCGCCAGG +
Preference number: 6 (lower is better)
Translates to: SRRSAPCNRGTN*SREERLNTRAR
Trigger: CCTGGCGCGCGTGTTCAGCCGCTCCTCTCTGGAGCAATTCGTGCCACGGTTGCAGGGGGCGCTGCGGCGAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS GCA 72 bp AGTCCGGTGGCGATCCTGAGGCTCTGGGTGTGCAAGTaGACGCGCGCCCCAGGCCCTGCGCTGACAGCTCCT +
Preference number: 6 (lower is better)
Translates to: SPVAILRLWVCK*TRAPGPALTAP
Trigger: AGGAGCTGTCAGCGCAGGGCCTGGGGCGCGCGTGCACTTGCACACCCAGAGCCTCAGGATCGCCACCGGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS GCA 72 bp AACCGCAGTCCGGTGGCGATCCTGAGGCTCTGGGTGTaGAAGTGCACGCGCGCCCCAGGCCCTGCGCTGACA +
Preference number: 6 (lower is better)
Translates to: NRSPVAILRLWV*KCTRAPGPALT
Trigger: TGTCAGCGCAGGGCCTGGGGCGCGCGTGCACTTGCACACCCAGAGCCTCAGGATCGCCACCGGACTGCGGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS CCA 72 bp GGGCCAGGCCGAGCAGCAGACCCGCACACAGGAGAGTaGTGCCGGCAGCCCCCAGCACGGACAAACAGCTCA +
Preference number: 6 (lower is better)
Translates to: GPGRAADPHTGE*CRQPPARTNSS
Trigger: TGAGCTGTTTGTCCGTGCTGGGGGCTGCCGGCACCACTCTCCTGTGTGCGGGTCTGCTGCTCGGCCTGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS CAA 72 bp CTCTCGCCGCAGCGCCCCCTGCAACCGTGGCACGAATaGCTCCAGAGAGGAGCGGCTGAACACGCGCGCCAG +
Preference number: 6 (lower is better)
Translates to: LSPQRPLQPWHE*LQRGAAEHARQ
Trigger: CTGGCGCGCGTGTTCAGCCGCTCCTCTCTGGAGCAATTCGTGCCACGGTTGCAGGGGGCGCTGCGGCGAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS CAA 72 bp GAGTGCTTTGGCCGCCTGGTAAACAGCCACCGGTCGTaGGGCGGCGCACCAGGAGCGCACCTCTCGCCGCAG +
Preference number: 6 (lower is better)
Translates to: ECFGRLVNSHRS*GGAPGAHLSPQ
Trigger: CTGCGGCGAGAGGTGCGCTCCTGGTGCGCCGCCCAACGACCGGTGGCTGTTTACCAGGCGGCCAAAGCACTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS CAA 90 bp GGAGGCCCAATCCCGGCTCAGAGTCCAGCGGAGGGTCCAGAGTTGTaGGGCCAGGCCGAGCAGCAGACCCGCACACAGGAGAGTGGTGCC +
Preference number: 6 (lower is better)
Translates to: GGPIPAQSPAEGPEL*GQAEQQTRTQESGA
Trigger: GGCACCACTCTCCTGTGTGCGGGTCTGCTGCTCGGCCTGGCCCAACAACTCTGGACCCTCCGCTGGACTCTGAGCCGGGATTGGGCCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS TCA 72 bp CCCCGGACACCGGCGGTAGGAGGCGCAGCACCTCCTTaGCTACGCAGTCGACGTAGCGCAAACGGCCCAGCA +
Preference number: 6 (lower is better)
Translates to: PRTPAVGGAAPP*LRSRRSANGPA
Trigger: TGCTGGGCCGTTTGCGCTACGTCGACTGCGTAGTCAAGGAGGTGCTGCGCCTCCTACCGCCGGTGTCCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS CCA 72 bp ATGGCCAGCCCATGGAGCCCTTGGGTAGGGGCAAGGTaGAGGCCCAATCCCGGCTCAGAGTCCAGCGGAGGG +
Preference number: 6 (lower is better)
Translates to: MASPWSPWVGAR*RPNPGSESSGG
Trigger: CCCTCCGCTGGACTCTGAGCCGGGATTGGGCCTCCACCTTGCCCCTACCCAAGGGCTCCATGGGCTGGCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS CCA 72 bp GGAGCGCACCTCTCGCCGCAGCGCCCCCTGCAACCGTaGCACGAATTGCTCCAGAGAGGAGCGGCTGAACAC +
Preference number: 6 (lower is better)
Translates to: GAHLSPQRPLQP*HELLQRGAAEH
Trigger: GTGTTCAGCCGCTCCTCTCTGGAGCAATTCGTGCCACGGTTGCAGGGGGCGCTGCGGCGAGAGGTGCGCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS CAA 90 bp GGTGGAGGCCCAATCCCGGCTCAGAGTCCAGCGGAGGGTCCAGAGTaGTTGGGCCAGGCCGAGCAGCAGACCCGCACACAGGAGAGTGGT +
Preference number: 6 (lower is better)
Translates to: GGGPIPAQSPAEGPE*LGQAEQQTRTQESG
Trigger: ACCACTCTCCTGTGTGCGGGTCTGCTGCTCGGCCTGGCCCAACAACTCTGGACCCTCCGCTGGACTCTGAGCCGGGATTGGGCCTCCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS TCA 72 bp GGGTGTGCAAGTGCACGCGCGCCCCAGGCCCTGCGCTaGCAGCTCCTGCTGGATTTTGGTGATGGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: GCASARAPQALR*QLLLDFGDGCW
Trigger: CCAGCAGCCATCACCAAAATCCAGCAGGAGCTGTCAGCGCAGGGCCTGGGGCGCGCGTGCACTTGCACACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS GCA 72 bp GAGCGGCTGAACACGCGCGCCAGGACCTTACGCCGTTaGCGATGGGGCTCACCAACCGCGCCAAGTAGTGTG +
Preference number: 6 (lower is better)
Translates to: ERLNTRARTLRR*RWGSPTAPSSV
Trigger: CACACTACTTGGCGCGGTTGGTGAGCCCCATCGGCAACGGCGTAAGGTCCTGGCGCGCGTGTTCAGCCGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS GCA 72 bp TCTGGTAACCGTCCAGTTCAAAGGTGCGCAGCGCAGTaGGGTAGCCCCCGGACACCGGCGGTAGGAGGCGCA +
Preference number: 6 (lower is better)
Translates to: SGNRPVQRCAAQ*GSPRTPAVGGA
Trigger: TGCGCCTCCTACCGCCGGTGTCCGGGGGCTACCGCACTGCGCTGCGCACCTTTGAACTGGACGGTTACCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS CCA 72 bp TCCCGGCTCAGAGTCCAGCGGAGGGTCCAGAGTTGTTaGGCCAGGCCGAGCAGCAGACCCGCACACAGGAGA +
Preference number: 6 (lower is better)
Translates to: SRLRVQRRVQSC*ARPSSRPAHRR
Trigger: TCTCCTGTGTGCGGGTCTGCTGCTCGGCCTGGCCCAACAACTCTGGACCCTCCGCTGGACTCTGAGCCGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS CAA 72 bp ATCCCGGCTCAGAGTCCAGCGGAGGGTCCAGAGTTGTaGGGCCAGGCCGAGCAGCAGACCCGCACACAGGAG +
Preference number: 6 (lower is better)
Translates to: IPAQSPAEGPEL*GQAEQQTRTQE
Trigger: CTCCTGTGTGCGGGTCTGCTGCTCGGCCTGGCCCAACAACTCTGGACCCTCCGCTGGACTCTGAGCCGGGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS CAA 72 bp CCAATCCCGGCTCAGAGTCCAGCGGAGGGTCCAGAGTaGTTGGGCCAGGCCGAGCAGCAGACCCGCACACAG +
Preference number: 6 (lower is better)
Translates to: PIPAQSPAEGPE*LGQAEQQTRTQ
Trigger: CTGTGTGCGGGTCTGCTGCTCGGCCTGGCCCAACAACTCTGGACCCTCCGCTGGACTCTGAGCCGGGATTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS GCA 72 bp ACCCAGCAGGATGCGCGCGGCCATGCGGAAGGTGAGTaGTTTGGCCGCCTGGTAAACAGCCACCGGTCGTTG +
Preference number: 6 (lower is better)
Translates to: TQQDARGHAEGE*FGRLVNSHRSL
Trigger: CAACGACCGGTGGCTGTTTACCAGGCGGCCAAAGCACTCACCTTCCGCATGGCCGCGCGCATCCTGCTGGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS CCA 72 bp TTCTCAGCGACGGCCTCATCCAGGTGCTCATACAACTaGTCCCTGGCCCGGATGCCCTTGCGCAGGCCGCTG +
Preference number: 6 (lower is better)
Translates to: FSATASSRCSYN*SLARMPLRRPL
Trigger: CAGCGGCCTGCGCAAGGGCATCCGGGCCAGGGACCAGTTGTATGAGCACCTGGATGAGGCCGTCGCTGAGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS CCA 72 bp CTGAACACGCGCGCCAGGACCTTACGCCGTTGCCGATaGGGCTCACCAACCGCGCCAAGTAGTGTGTGTGAC +
Preference number: 6 (lower is better)
Translates to: LNTRARTLRRCR*GSPTAPSSVCD
Trigger: GTCACACACACTACTTGGCGCGGTTGGTGAGCCCCATCGGCAACGGCGTAAGGTCCTGGCGCGCGTGTTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS CCA 72 bp GGAAAAAGAGCAGCAGCCCGTCCACCGGGTGCACGATaGGCACCGTCTGCATTACGGGGAAGGCAGGTGTGG +
Preference number: 6 (lower is better)
Translates to: GKRAAARPPGAR*APSALRGRQVW
Trigger: CCACACCTGCCTTCCCCGTAATGCAGACGGTGCCCATCGTGCACCCGGTGGACGGGCTGCTGCTCTTTTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS CCA 72 bp GGTAACCCATCTCCCGCACCCGAAGTCGGAAGAGGGTaGAAAAAGAGCAGCAGCCCGTCCACCGGGTGCACG +
Preference number: 6 (lower is better)
Translates to: GNPSPAPEVGRG*KKSSSPSTGCT
Trigger: CGTGCACCCGGTGGACGGGCTGCTGCTCTTTTTCCACCCTCTTCCGACTTCGGGTGCGGGAGATGGGTTACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS CAA 72 bp AGGTGCTCATACAACTGGTCCCTGGCCCGGATGCCCTaGCGCAGGCCGCTGAACGGTACGTCCAAGGGCAGT +
Preference number: 6 (lower is better)
Translates to: RCSYNWSLARMP*RRPLNGTSKGS
Trigger: ACTGCCCTTGGACGTACCGTTCAGCGGCCTGCGCAAGGGCATCCGGGCCAGGGACCAGTTGTATGAGCACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS GCA 72 bp AGAGGGTGGAAAAAGAGCAGCAGCCCGTCCACCGGGTaGACGATGGGCACCGTCTGCATTACGGGGAAGGCA +
Preference number: 6 (lower is better)
Translates to: RGWKKSSSPSTG*TMGTVCITGKA
Trigger: TGCCTTCCCCGTAATGCAGACGGTGCCCATCGTGCACCCGGTGGACGGGCTGCTGCTCTTTTTCCACCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS GCA 72 bp ACCGCGCCAAGTAGTGTGTGTGACCCTAGTAGAATATaGGCACTCTGTGGCCACTGGCTACGCACCAGGCGG +
Preference number: 6 (lower is better)
Translates to: TAPSSVCDPSRI*ALCGHWLRTRR
Trigger: CCGCCTGGTGCGTAGCCAGTGGCCACAGAGTGCGCATATTCTACTAGGGTCACACACACTACTTGGCGCGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS TCA 72 bp AGCAGGGCATCACCTGGCTCTGCTGTCTGTTTCTCCTaGAGCTTCTCAGCGACGGCCTCATCCAGGTGCTCA +
Preference number: 6 (lower is better)
Translates to: SRASPGSAVCFS*SFSATASSRCS
Trigger: TGAGCACCTGGATGAGGCCGTCGCTGAGAAGCTTCAGGAGAAACAGACAGCAGAGCCAGGTGATGCCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS TCA 72 bp GAGGAGCTCTACAGCCAACTCCTTCAGCTCTTGCACTaGGGGCTCGTGGCCCAGCTCCCTAGCGCTGTTAAT +
Preference number: 6 (lower is better)
Translates to: EELYSQLLQLLH*GLVAQLPSAVN
Trigger: ATTAACAGCGCTAGGGAGCTGGGCCACGAGCCCTCAGTGCAAGAGCTGAAGGAGTTGGCTGTAGAGCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS GCA 72 bp CGGGAACTGTGGAAACGAGAGCCCTGTACCAACCAGTaGAGCGTTTCACCGAAGAATGGCCAGCCCATGGAG +
Preference number: 6 (lower is better)
Translates to: RELWKREPCTNQ*SVSPKNGQPME
Trigger: CTCCATGGGCTGGCCATTCTTCGGTGAAACGCTGCACTGGTTGGTACAGGGCTCTCGTTTCCACAGTTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS CCA 72 bp AGTGAGAAGAGGTTCTCCACCAGCTGTTCAAAGGTATaGGCCAGCTCGGTGCATCGCGCTTCGTCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: SEKRFSTSCSKV*ASSVHRASSSC
Trigger: GCAGCTGGACGAAGCGCGATGCACCGAGCTGGCCCATACCTTTGAACAGCTGGTGGAGAACCTCTTCTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS TCA 72 bp CTTGCGCAGGCCGCTGAACGGTACGTCCAAGGGCAGTaGGAAGAGGTTCTCCACCAGCTGTTCAAAGGTATG +
Preference number: 6 (lower is better)
Translates to: LAQAAERYVQGQ*EEVLHQLFKGM
Trigger: CATACCTTTGAACAGCTGGTGGAGAACCTCTTCTCACTGCCCTTGGACGTACCGTTCAGCGGCCTGCGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS GCA 72 bp GCTGTTAATAATCAAGAGCAGGGCATCACCTGGCTCTaGTGTCTGTTTCTCCTGAAGCTTCTCAGCGACGGC +
Preference number: 6 (lower is better)
Translates to: AVNNQEQGITWL*CLFLLKLLSDG
Trigger: GCCGTCGCTGAGAAGCTTCAGGAGAAACAGACAGCAGAGCCAGGTGATGCCCTGCTCTTGATTATTAACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5
CDS CCA 72 bp CCTAGCGCTGTTAATAATCAAGAGCAGGGCATCACCTaGCTCTGCTGTCTGTTTCTCCTGAAGCTTCTCAGC +
Preference number: 6 (lower is better)
Translates to: PSAVNNQEQGIT*LCCLFLLKLLS
Trigger: GCTGAGAAGCTTCAGGAGAAACAGACAGCAGAGCCAGGTGATGCCCTGCTCTTGATTATTAACAGCGCTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073391.5