Pregenerated sensors for CYP26B1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063415Ensembl transcript IDs: ENSMUST00000077705.6, ENSMUST00000168003.9, ENSMUST00000204109.2, ENSMUST00000204146.3, ENSMUST00000205228.3
Found 400 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTTGCCTCACTGAAGCCCTGGAAAGGACAGAGGCTGGCAGGTGTGTaGGTGTGGTGGCAATGGCGGTGTGTAGGTGTTGGGGGAGGGTGC | + |
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Preference number: 1 (lower is better) Translates to: LASLKPWKGQRLAGV*VWWQWRCVGVGGGC Trigger: GCACCCTCCCCCAACACCTACACACCGCCATTGCCACCACACGCACACACCTGCCAGCCTCTGTCCTTTCCAGGGCTTCAGTGAGGCAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR GCA 90 bp | CATCGTCAGTCTGAAGCAGATGGCTGCAGGCAGGCAGGGTTAGCGTaGAGGAAGATGAGCCTCCCGGGCACTGGTCTGTGGGGTATGGGC | + |
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Preference number: 1 (lower is better) Translates to: HRQSEADGCRQAGLA*RKMSLPGTGLWGMG Trigger: GCCCATACCCCACAGACCAGTGCCCGGGAGGCTCATCTTCCTGCACGCTAACCCTGCCTGCCTGCAGCCATCTGCTTCAGACTGACGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR CCA 90 bp | CCCTGGAAAGGACAGAGGCTGGCAGGTGTGTGCGTGTGGTGGCAATaGCGGTGTGTAGGTGTTGGGGGAGGGTGCTCCAGACCTCAGTCT | + |
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Preference number: 1 (lower is better) Translates to: PWKGQRLAGVCVWWQ*RCVGVGGGCSRPQS Trigger: AGACTGAGGTCTGGAGCACCCTCCCCCAACACCTACACACCGCCATTGCCACCACACGCACACACCTGCCAGCCTCTGTCCTTTCCAGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR CCA 90 bp | CTGAAGCCCTGGAAAGGACAGAGGCTGGCAGGTGTGTGCGTGTGGTaGCAATGGCGGTGTGTAGGTGTTGGGGGAGGGTGCTCCAGACCT | + |
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Preference number: 1 (lower is better) Translates to: LKPWKGQRLAGVCVW*QWRCVGVGGGCSRP Trigger: AGGTCTGGAGCACCCTCCCCCAACACCTACACACCGCCATTGCCACCACACGCACACACCTGCCAGCCTCTGTCCTTTCCAGGGCTTCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR TCA 90 bp | CTTATTCATCCTCACCAGGGGAGTGGCTGGCACTGGGACAGGCAGTaGGTGAACAGGAAGTGGTGGCCCCTAGACCCACATGCCCAGGGC | + |
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Preference number: 1 (lower is better) Translates to: LIHPHQGSGWHWDRQ*VNRKWWPLDPHAQG Trigger: GCCCTGGGCATGTGGGTCTAGGGGCCACCACTTCCTGTTCACTCACTGCCTGTCCCAGTGCCAGCCACTCCCCTGGTGAGGATGAATAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR GCA 90 bp | GTTAGGCTGGTATGGGCCCCTCAAGGCTGGTGGCAGCCGCTGCCCTaGCTCGGTTGGCTTAGGCGAGAATCTCCAGAACACTGTTCTGGT | + |
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Preference number: 1 (lower is better) Translates to: VRLVWAPQGWWQPLP*LGWLRRESPEHCSG Trigger: ACCAGAACAGTGTTCTGGAGATTCTCGCCTAAGCCAACCGAGGCAGGGCAGCGGCTGCCACCAGCCTTGAGGGGCCCATACCAGCCTAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR GCA 90 bp | TATAGCCAGAAGCCACCCGGCTCAGTTGGTCCCATGGGGGAGGCATaGCGGTGTCCCTGTCCAGGGCCACCAAGGAAGATGCTGAGGATT | + |
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Preference number: 1 (lower is better) Translates to: YSQKPPGSVGPMGEA*RCPCPGPPRKMLRI Trigger: AATCCTCAGCATCTTCCTTGGTGGCCCTGGACAGGGACACCGGCATGCCTCCCCCATGGGACCAACTGAGCCGGGTGGCTTCTGGCTATA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR CCA 90 bp | TCACTGAAGCCCTGGAAAGGACAGAGGCTGGCAGGTGTGTGCGTGTaGTGGCAATGGCGGTGTGTAGGTGTTGGGGGAGGGTGCTCCAGA | + |
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Preference number: 1 (lower is better) Translates to: SLKPWKGQRLAGVCV*WQWRCVGVGGGCSR Trigger: TCTGGAGCACCCTCCCCCAACACCTACACACCGCCATTGCCACCACACGCACACACCTGCCAGCCTCTGTCCTTTCCAGGGCTTCAGTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR CCA 90 bp | GTATGGGCCCCTCAAGGCTGGTGGCAGCCGCTGCCCTGCCTCGGTTaGCTTAGGCGAGAATCTCCAGAACACTGTTCTGGTCACCATTTG | + |
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Preference number: 1 (lower is better) Translates to: VWAPQGWWQPLPCLG*LRRESPEHCSGHHL Trigger: CAAATGGTGACCAGAACAGTGTTCTGGAGATTCTCGCCTAAGCCAACCGAGGCAGGGCAGCGGCTGCCACCAGCCTTGAGGGGCCCATAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR GCA 90 bp | CCCCAAACCCTTCCCAGGAAGGTCCCACATGGCCAACCCTCAAAATaGCAGAGGCAGGAATCCCTCGTCTTCCACCCAGTCATCTTCCAC | + |
|
Preference number: 1 (lower is better) Translates to: PQTLPRKVPHGQPSK*QRQESLVFHPVIFH Trigger: GTGGAAGATGACTGGGTGGAAGACGAGGGATTCCTGCCTCTGGCATTTTGAGGGTTGGCCATGTGGGACCTTCCTGGGAAGGGTTTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR CCA 90 bp | CAAATAGCAGCGATAGGTAATTTCCAATGTCCAAACTGGTTAGGCTaGTATGGGCCCCTCAAGGCTGGTGGCAGCCGCTGCCCTGCCTCG | + |
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Preference number: 1 (lower is better) Translates to: QIAAIGNFQCPNWLG*YGPLKAGGSRCPAS Trigger: CGAGGCAGGGCAGCGGCTGCCACCAGCCTTGAGGGGCCCATACCAGCCTAACCAGTTTGGACATTGGAAATTACCTATCGCTGCTATTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR CCA 90 bp | ACTGGGTTAGACCAGACACACTGTCTTCTTGCCTCACTGAAGCCCTaGAAAGGACAGAGGCTGGCAGGTGTGTGCGTGTGGTGGCAATGG | + |
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Preference number: 1 (lower is better) Translates to: TGLDQTHCLLASLKP*KGQRLAGVCVWWQW Trigger: CCATTGCCACCACACGCACACACCTGCCAGCCTCTGTCCTTTCCAGGGCTTCAGTGAGGCAAGAAGACAGTGTGTCTGGTCTAACCCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR GCA 90 bp | CCTGAAGCAGCTCAGAGAGAGGACTCTCTTTCCACCTTACCTCTCTaGTTTCTTCTCTACCCCAAACCCTGGGCTGGGCTTAGCAGACAG | + |
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Preference number: 1 (lower is better) Translates to: PEAAQREDSLSTLPL*FLLYPKPWAGLSRQ Trigger: CTGTCTGCTAAGCCCAGCCCAGGGTTTGGGGTAGAGAAGAAAGCAGAGAGGTAAGGTGGAAAGAGAGTCCTCTCTCTGAGCTGCTTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR GCA 90 bp | AACCCTCTACCAAAGAACTGGGTTAGACCAGACACACTGTCTTCTTaGCTCACTGAAGCCCTGGAAAGGACAGAGGCTGGCAGGTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: NPLPKNWVRPDTLSS*LTEALERTEAGRCV Trigger: CACACACCTGCCAGCCTCTGTCCTTTCCAGGGCTTCAGTGAGGCAAGAAGACAGTGTGTCTGGTCTAACCCAGTTCTTTGGTAGAGGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR CCA 90 bp | AAGAGAGGACAAATAGCAGCGATAGGTAATTTCCAATGTCCAAACTaGTTAGGCTGGTATGGGCCCCTCAAGGCTGGTGGCAGCCGCTGC | + |
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Preference number: 1 (lower is better) Translates to: KRGQIAAIGNFQCPN*LGWYGPLKAGGSRC Trigger: GCAGCGGCTGCCACCAGCCTTGAGGGGCCCATACCAGCCTAACCAGTTTGGACATTGGAAATTACCTATCGCTGCTATTTGTCCTCTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR CCA 90 bp | TTTTGCCTAGAGCCCAGCAGGGCTGTTAACCCTCTACCAAAGAACTaGGTTAGACCAGACACACTGTCTTCTTGCCTCACTGAAGCCCTG | + |
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Preference number: 1 (lower is better) Translates to: FCLEPSRAVNPLPKN*VRPDTLSSCLTEAL Trigger: CAGGGCTTCAGTGAGGCAAGAAGACAGTGTGTCTGGTCTAACCCAGTTCTTTGGTAGAGGGTTAACAGCCCTGCTGGGCTCTAGGCAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR GCA 90 bp | GGCAGAGATGCAGGGTGTCTGACTCTGAGGTTAAACTACATCTTTTaGCTAGAGCCCAGCAGGGCTGTTAACCCTCTACCAAAGAACTGG | + |
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Preference number: 1 (lower is better) Translates to: GRDAGCLTLRLNYIF*LEPSRAVNPLPKNW Trigger: CCAGTTCTTTGGTAGAGGGTTAACAGCCCTGCTGGGCTCTAGGCAAAAGATGTAGTTTAACCTCAGAGTCAGACACCCTGCATCTCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR GCA 90 bp | GGCTTTGACAGCCTGGGAGGAGGTGCTAAGTACACCTGGCAGAGATaGAGGGTGTCTGACTCTGAGGTTAAACTACATCTTTTGCCTAGA | + |
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Preference number: 1 (lower is better) Translates to: GFDSLGGGAKYTWQR*RVSDSEVKLHLLPR Trigger: TCTAGGCAAAAGATGTAGTTTAACCTCAGAGTCAGACACCCTGCATCTCTGCCAGGTGTACTTAGCACCTCCTCCCAGGCTGTCAAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR CCA 90 bp | CCTCAAGGCTGGTGGCAGCCGCTGCCCTGCCTCGGTTGGCTTAGGCGAGAATCTCCCCACCCCTGCTGTTaGGCTGGGCTGAGACCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: PQGWWQPLPCLGWLRRESPHPCC*AGLRPE Trigger: CTCTGGTCTCAGCCCAGCCCAACAGCAGGGGTGGGG...AGATTCTCGCCTAAGCCAACCGAGGCAGGGCAGCGGCTGCCACCAGCCTTGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR CCA 90 bp | ACACACCAGAACCCCAAACCCTTCCCAGGAAGGTCCCACATGGCCAACCCTCAAGCCCCTCAAGGCTGGTaGCAGCCGCTGCCCTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: THQNPKPFPGRSHMANPQAPQGW*QPLPCL Trigger: GAGGCAGGGCAGCGGCTGCCACCAGCCTTGAGGGGC...TTGAGGGTTGGCCATGTGGGACCTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR CCA 90 bp | TCTCCTTCTCCATTGCTTTCTAGCTACAGCCTCCCCTGCAGCTTCTCCAGACCCGCCCCTCAAGGCTGGTaGCAGCCGCTGCCCTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: SPSPLLSSYSLPCSFSRPAPQGW*QPLPCL Trigger: GAGGCAGGGCAGCGGCTGCCACCAGCCTTGAGGGGC...GGGTCTGGAGAAGCTGCAGGGGAGGCTGTAGCTAGAAAGCAATGGAGAAGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR TCA 90 bp | AGAGACACACCAGAACCCCAAACCCTTCCCAGGAAGGTCCCACATGGCCAACCCACATGCCCAGGGCTTTaGCAGCCTGGGAGGAGGTGC | + |
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Preference number: 2 (lower is better) Translates to: RDTPEPQTLPRKVPHGQPTCPGL*QPGRRC Trigger: GCACCTCCTCCCAGGCTGTCAAAGCCCTGGGCATGT...GGGTTGGCCATGTGGGACCTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGTCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR GCA 90 bp | AGAGACACACCAGAACCCCAAACCCTTCCCAGGAAGGTCCCACATGGCCAACCCGGTGTTGGGGGAGGGTaGTCCAGACCTCAGTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: RDTPEPQTLPRKVPHGQPGVGGG*SRPQSG Trigger: GCCAGACTGAGGTCTGGAGCACCCTCCCCCAACACC...GGGTTGGCCATGTGGGACCTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGTCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR GCA 90 bp | TCTCCTTCTCCATTGCTTTCTAGCTACAGCCTCCCCTGCAGCTTCTCCAGACCCGCTGGTGGCAGCCGCTaGCCTGCCTCGGTTGGCTTA | + |
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Preference number: 2 (lower is better) Translates to: SPSPLLSSYSLPCSFSRPAGGSR*PASVGL Trigger: TAAGCCAACCGAGGCAGGGCAGCGGCTGCCACCAGC...GGGTCTGGAGAAGCTGCAGGGGAGGCTGTAGCTAGAAAGCAATGGAGAAGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR CCA 90 bp | CTGTCATGGGCATACAGTCCTGGCTCTGTCCCAGGAGCTAAGCTAGGTGGCAGTCCCCTGCTGTTGGGCTaGGCTGAGACCAGAGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: LSWAYSPGSVPGAKLGGSPLLLG*AETRVR Trigger: CCTCACTCTGGTCTCAGCCCAGCCCAACAGCAGGGG...ACTGCCACCTAGCTTAGCTCCTGGGACAGAGCCAGGACTGTATGCCCATGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR CCA 90 bp | AGAGACACACCAGAACCCCAAACCCTTCCCAGGAAGGTCCCACATGGCCAACCCCTGGTTAGGCTGGTATaGGCCCCTCAAGGCTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: RDTPEPQTLPRKVPHGQPLVRLV*APQGWW Trigger: CCACCAGCCTTGAGGGGCCCATACCAGCCTAACCAG...GGGTTGGCCATGTGGGACCTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGTCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR TCA 90 bp | TCTCCTTCTCCATTGCTTTCTAGCTACAGCCTCCCCTGCAGCTTCTCCAGACCCACATGCCCAGGGCTTTaGCAGCCTGGGAGGAGGTGC | + |
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Preference number: 2 (lower is better) Translates to: SPSPLLSSYSLPCSFSRPTCPGL*QPGRRC Trigger: GCACCTCCTCCCAGGCTGTCAAAGCCCTGGGCATGT...GGGTCTGGAGAAGCTGCAGGGGAGGCTGTAGCTAGAAAGCAATGGAGAAGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR GCA 90 bp | CCGGCGCTAACACTGTCATGGGCATACAGTCCTGGCTCTGTCCCAGGAGCTAAGCTTTGGGGGAGGTTCTaGCAGGGAAGAGGCCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: PALTLSWAYSPGSVPGAKLWGRF*QGRGQR Trigger: TCTCTGGCCTCTTCCCTGGCAGAACCTCCCCCAAAG...CTTAGCTCCTGGGACAGAGCCAGGACTGTATGCCCATGACAGTGTTAGCGCCGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR GCA 90 bp | GGCCTGAAGCAGCTCAGAGAGAGGACTCTCTTTCCACCTTACCTCTCTGCTTTCGCTGGTGGCAGCCGCTaGCCTGCCTCGGTTGGCTTA | + |
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Preference number: 2 (lower is better) Translates to: GLKQLRERTLFPPYLSAFAGGSR*PASVGL Trigger: TAAGCCAACCGAGGCAGGGCAGCGGCTGCCACCAGC...GAAAGCAGAGAGGTAAGGTGGAAAGAGAGTCCTCTCTCTGAGCTGCTTCAGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR GCA 90 bp | CCTAGAGACACACCAGAACCCCAAACCCTTCCCAGGAAGGTCCCACATGGCCAAAGCTACAGCCTCCCCTaGAGCTTCTCCAGACCCCAC | + |
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Preference number: 2 (lower is better) Translates to: PRDTPEPQTLPRKVPHGQSYSLP*SFSRPH Trigger: GTGGGGTCTGGAGAAGCTGCAGGGGAGGCTGTAGCT...TTGGCCATGTGGGACCTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGTCTCTAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR GCA 90 bp | ACACACCAGAACCCCAAACCCTTCCCAGGAAGGTCCCACATGGCCAACCCTCAAAGCTACAGCCTCCCCTaGAGCTTCTCCAGACCCCAC | + |
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Preference number: 2 (lower is better) Translates to: THQNPKPFPGRSHMANPQSYSLP*SFSRPH Trigger: GTGGGGTCTGGAGAAGCTGCAGGGGAGGCTGTAGCT...TTGAGGGTTGGCCATGTGGGACCTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR CCA 90 bp | GCAGGGCTGTTAACCCTCTACCAAAGAACTGGGTTAGACCAGACACACTGTCTTGCCCCTCAAGGCTGGTaGCAGCCGCTGCCCTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: AGLLTLYQRTGLDQTHCLAPQGW*QPLPCL Trigger: GAGGCAGGGCAGCGGCTGCCACCAGCCTTGAGGGGC...AAGACAGTGTGTCTGGTCTAACCCAGTTCTTTGGTAGAGGGTTAACAGCCCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR CCA 90 bp | CCTAGAGACACACCAGAACCCCAAACCCTTCCCAGGAAGGTCCCACATGGCCAACTGGTTAGGCTGGTATaGGCCCCTCAAGGCTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: PRDTPEPQTLPRKVPHGQLVRLV*APQGWW Trigger: CCACCAGCCTTGAGGGGCCCATACCAGCCTAACCAG...TTGGCCATGTGGGACCTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGTCTCTAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR CCA 90 bp | CCCAGGGCTTTGACAGCCTGGGAGGAGGTGCTAAGTACACCTGGCAGAGATGCAGCCTCACTGAAGCCCTaGAAAGGACAGAGGCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: PRALTAWEEVLSTPGRDAASLKP*KGQRLA Trigger: TGCCAGCCTCTGTCCTTTCCAGGGCTTCAGTGAGGC...TGCATCTCTGCCAGGTGTACTTAGCACCTCCTCCCAGGCTGTCAAAGCCCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR CCA 90 bp | TCTCCTTCTCCATTGCTTTCTAGCTACAGCCTCCCCTGCAGCTTCTCCAGACCCTCCTCACCAGGGGAGTaGCTGGCACTGGGACAGGCA | + |
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Preference number: 2 (lower is better) Translates to: SPSPLLSSYSLPCSFSRPSSPGE*LALGQA Trigger: TGCCTGTCCCAGTGCCAGCCACTCCCCTGGTGAGGA...GGGTCTGGAGAAGCTGCAGGGGAGGCTGTAGCTAGAAAGCAATGGAGAAGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR GCA 90 bp | GGCCTGAAGCAGCTCAGAGAGAGGACTCTCTTTCCACCTTACCTCTCTGCTTTCGGTGTTGGGGGAGGGTaGTCCAGACCTCAGTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: GLKQLRERTLFPPYLSAFGVGGG*SRPQSG Trigger: GCCAGACTGAGGTCTGGAGCACCCTCCCCCAACACC...GAAAGCAGAGAGGTAAGGTGGAAAGAGAGTCCTCTCTCTGAGCTGCTTCAGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR CCA 90 bp | ATCCCTCACCAGGACCAGAGTCACATGCCACATCGTCAGTCTGAAGCAGATGGCCTGGTTAGGCTGGTATaGGCCCCTCAAGGCTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: IPHQDQSHMPHRQSEADGLVRLV*APQGWW Trigger: CCACCAGCCTTGAGGGGCCCATACCAGCCTAACCAG...GCCATCTGCTTCAGACTGACGATGTGGCATGTGACTCTGGTCCTGGTGAGGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR CCA 90 bp | AGAGACACACCAGAACCCCAAACCCTTCCCAGGAAGGTCCCACATGGCCAACCCGGAGTGGTTATGGGGTaGGGGACTCTTCCAAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: RDTPEPQTLPRKVPHGQPGVVMG*GTLPRA Trigger: TGCTCTTGGAAGAGTCCCCCACCCCATAACCACTCC...GGGTTGGCCATGTGGGACCTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGTCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR CCA 90 bp | TCTCCTTCTCCATTGCTTTCTAGCTACAGCCTCCCCTGCAGCTTCTCCAGACCCGCCTCACTGAAGCCCTaGAAAGGACAGAGGCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: SPSPLLSSYSLPCSFSRPASLKP*KGQRLA Trigger: TGCCAGCCTCTGTCCTTTCCAGGGCTTCAGTGAGGC...GGGTCTGGAGAAGCTGCAGGGGAGGCTGTAGCTAGAAAGCAATGGAGAAGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR CCA 90 bp | ATCCCTCACCAGGACCAGAGTCACATGCCACATCGTCAGTCTGAAGCAGATGGCGTGAACAGGAAGTGGTaGCCCCTAGACCCACATGCC | + |
|
Preference number: 2 (lower is better) Translates to: IPHQDQSHMPHRQSEADGVNRKW*PLDPHA Trigger: GGCATGTGGGTCTAGGGGCCACCACTTCCTGTTCAC...GCCATCTGCTTCAGACTGACGATGTGGCATGTGACTCTGGTCCTGGTGAGGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR CCA 90 bp | TCTCCTTCTCCATTGCTTTCTAGCTACAGCCTCCCCTGCAGCTTCTCCAGACCCGTGAACAGGAAGTGGTaGCCCCTAGACCCACATGCC | + |
|
Preference number: 2 (lower is better) Translates to: SPSPLLSSYSLPCSFSRPVNRKW*PLDPHA Trigger: GGCATGTGGGTCTAGGGGCCACCACTTCCTGTTCAC...GGGTCTGGAGAAGCTGCAGGGGAGGCTGTAGCTAGAAAGCAATGGAGAAGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR CCA 90 bp | GAGGTCTCTTTTCCTGTTACCTCTGAGACCCATCCGGGCAGACCATCTTTTCTTGAGCCTCCCGGGCACTaGTCTGTGGGGTATGGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: EVSFPVTSETHPGRPSFLEPPGH*SVGYGQ Trigger: CTGCCCATACCCCACAGACCAGTGCCCGGGAGGCTC...AAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR CCA 90 bp | TCTCTTTTCCTGTTACCTCTGAGACCCATCCGGGCAGACCATCTTTTCTTCCTCGAGCCTCCCGGGCACTaGTCTGTGGGGTATGGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: SLFLLPLRPIRADHLFFLEPPGH*SVGYGQ Trigger: CTGCCCATACCCCACAGACCAGTGCCCGGGAGGCTC...GAGGAAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR TCA 90 bp | TCTCTTTTCCTGTTACCTCTGAGACCCATCCGGGCAGACCATCTTTTCTTCCTCACATGCCCAGGGCTTTaGCAGCCTGGGAGGAGGTGC | + |
|
Preference number: 2 (lower is better) Translates to: SLFLLPLRPIRADHLFFLTCPGL*QPGRRC Trigger: GCACCTCCTCCCAGGCTGTCAAAGCCCTGGGCATGT...GAGGAAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR GCA 90 bp | GGCCTGAAGCAGCTCAGAGAGAGGACTCTCTTTCCACCTTACCTCTCTGCTTTCCTTTGGGGGAGGTTCTaGCAGGGAAGAGGCCAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: GLKQLRERTLFPPYLSAFLWGRF*QGRGQR Trigger: TCTCTGGCCTCTTCCCTGGCAGAACCTCCCCCAAAG...GAAAGCAGAGAGGTAAGGTGGAAAGAGAGTCCTCTCTCTGAGCTGCTTCAGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR GCA 90 bp | GCAGGGCTGTTAACCCTCTACCAAAGAACTGGGTTAGACCAGACACACTGTCTTGGTGTTGGGGGAGGGTaGTCCAGACCTCAGTCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: AGLLTLYQRTGLDQTHCLGVGGG*SRPQSG Trigger: GCCAGACTGAGGTCTGGAGCACCCTCCCCCAACACC...AAGACAGTGTGTCTGGTCTAACCCAGTTCTTTGGTAGAGGGTTAACAGCCCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR CCA 90 bp | GCAGGGCTGTTAACCCTCTACCAAAGAACTGGGTTAGACCAGACACACTGTCTTCCCCTGCTGTTGGGCTaGGCTGAGACCAGAGTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: AGLLTLYQRTGLDQTHCLPLLLG*AETRVR Trigger: CCTCACTCTGGTCTCAGCCCAGCCCAACAGCAGGGG...AAGACAGTGTGTCTGGTCTAACCCAGTTCTTTGGTAGAGGGTTAACAGCCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR TCA 90 bp | ACACACCAGAACCCCAAACCCTTCCCAGGAAGGTCCCACATGGCCAACCCTCAATCACCATTTGATCAGTaGCAGAAAGAGGGACGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: THQNPKPFPGRSHMANPQSPFDQ*QKEGRG Trigger: CCCACGTCCCTCTTTCTGTCACTGATCAAATGGTGA...TTGAGGGTTGGCCATGTGGGACCTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR TCA 90 bp | CCTAGAGACACACCAGAACCCCAAACCCTTCCCAGGAAGGTCCCACATGGCCAATCACCATTTGATCAGTaGCAGAAAGAGGGACGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: PRDTPEPQTLPRKVPHGQSPFDQ*QKEGRG Trigger: CCCACGTCCCTCTTTCTGTCACTGATCAAATGGTGA...TTGGCCATGTGGGACCTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGTCTCTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR TCA 90 bp | ACACACCAGAACCCCAAACCCTTCCCAGGAAGGTCCCACATGGCCAACCCTCAATCTGGCCAAGGTCAGTaGATAAATATGGGACAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: THQNPKPFPGRSHMANPQSGQGQ*INMGQG Trigger: CCCCTGTCCCATATTTATTCACTGACCTTGGCCAGA...TTGAGGGTTGGCCATGTGGGACCTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR TCA 90 bp | CTGCCCAGGATGCACACGCCAGCGCCTAACTTTGAAAGTGCTTCAATCTGCAAGGTTCTGTGTGGCTGGTaGGATGTGGCTGACCCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: LPRMHTPAPNFESASICKVLCGW*DVADPH Trigger: ATGAGGGTCAGCCACATCTCACCAGCCACACAGAAC...CTTGCAGATTGAAGCACTTTCAAAGTTAGGCGCTGGCGTGTGCATCCTGGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205228.3 |
||
| 3UTR-3UTR GCA 90 bp | TCTCTTTTCCTGTTACCTCTGAGACCCATCCGGGCAGACCATCTTTTCTTCCTCCAGGCAGGGTTAGCGTaGAGGAAGATGAGCCTCCCG | + |
|
Preference number: 2 (lower is better) Translates to: SLFLLPLRPIRADHLFFLQAGLA*RKMSLP Trigger: CGGGAGGCTCATCTTCCTGCACGCTAACCCTGCCTG...GAGGAAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR CCA 90 bp | TCTCTTTTCCTGTTACCTCTGAGACCCATCCGGGCAGACCATCTTTTCTTCCTCCTGGTTAGGCTGGTATaGGCCCCTCAAGGCTGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: SLFLLPLRPIRADHLFFLLVRLV*APQGWW Trigger: CCACCAGCCTTGAGGGGCCCATACCAGCCTAACCAG...GAGGAAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR CCA 90 bp | AAACAGACAAAATTGCCTAGAGACACACCAGAACCCCAAACCCTTCCCAGGAAGTCCTCACCAGGGGAGTaGCTGGCACTGGGACAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: KQTKLPRDTPEPQTLPRKSSPGE*LALGQA Trigger: TGCCTGTCCCAGTGCCAGCCACTCCCCTGGTGAGGA...CTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGTCTCTAGGCAATTTTGTCTGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR CAA 90 bp | CCGCATCAAAATGGCTGCCCAGGATGCACACGCCAGCGCCTAACTTaGAAAGTGCTTCAATCTGCAAGCCCGTGGCAGGAATTTTTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: PHQNGCPGCTRQRLT*KVLQSASPWQEFLW Trigger: CCACAAAAATTCCTGCCACGGGCTTGCAGATTGAAGCACTTTCAAAGTTAGGCGCTGGCGTGTGCATCCTGGGCAGCCATTTTGATGCGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205228.3 |
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| 3UTR-3UTR GCA 90 bp | TCTCTTTTCCTGTTACCTCTGAGACCCATCCGGGCAGACCATCTTTTCTTCCTCCTTTGGGGGAGGTTCTaGCAGGGAAGAGGCCAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: SLFLLPLRPIRADHLFFLLWGRF*QGRGQR Trigger: TCTCTGGCCTCTTCCCTGGCAGAACCTCCCCCAAAG...GAGGAAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR GCA 90 bp | GGAAGACAGAAGTCCCTTCAGAAGAACCCGTATCCTTATTCATCCTCACCAGGGCTTTGGGGGAGGTTCTaGCAGGGAAGAGGCCAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: GRQKSLQKNPYPYSSSPGLWGRF*QGRGQR Trigger: TCTCTGGCCTCTTCCCTGGCAGAACCTCCCCCAAAG...CCCTGGTGAGGATGAATAAGGATACGGGTTCTTCTGAAGGGACTTCTGTCTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR GCA 90 bp | GCAGCATGCACCTTTTTCATAAACTTTGCTGAGTCTTTACACAGTCTGGCCTGTGCTGGTGGCAGCCGCTaGCCTGCCTCGGTTGGCTTA | + |
|
Preference number: 2 (lower is better) Translates to: AACTFFINFAESLHSLACAGGSR*PASVGL Trigger: TAAGCCAACCGAGGCAGGGCAGCGGCTGCCACCAGC...ACAGGCCAGACTGTGTAAAGACTCAGCAAAGTTTATGAAAAAGGTGCATGCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR GCA 90 bp | ATCCCTCACCAGGACCAGAGTCACATGCCACATCGTCAGTCTGAAGCAGATGGCCCTCTCCTTCTCCATTaGTTTCTAGCTACAGCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: IPHQDQSHMPHRQSEADGPLLLH*FLATAS Trigger: GGAGGCTGTAGCTAGAAAGCAATGGAGAAGGAGAGG...GCCATCTGCTTCAGACTGACGATGTGGCATGTGACTCTGGTCCTGGTGAGGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR GCA 90 bp | CCTAGAGACACACCAGAACCCCAAACCCTTCCCAGGAAGGTCCCACATGGCCAACTGACAAATCACTTATaGCCTGACCTCAATCGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: PRDTPEPQTLPRKVPHGQLTNHL*PDLNRP Trigger: AGGGCGATTGAGGTCAGGGCATAAGTGATTTGTCAG...TTGGCCATGTGGGACCTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGTCTCTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR GCA 90 bp | TCTCTTTTCCTGTTACCTCTGAGACCCATCCGGGCAGACCATCTTTTCTTCCTCTCTGAAGCAGATGGCTaGAGGCAGGCAGGGTTAGCG | + |
|
Preference number: 2 (lower is better) Translates to: SLFLLPLRPIRADHLFFLSEADG*RQAGLA Trigger: CGCTAACCCTGCCTGCCTGCAGCCATCTGCTTCAGA...GAGGAAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR CCA 90 bp | TTCTGGAGAAAAAGAGCCACTACCTTAGTAACAGGCAAAAGCCATGGACGGAAACCCCACCCCTGCTGTTaGGCTGGGCTGAGACCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: FWRKRATTLVTGKSHGRKPHPCC*AGLRPE Trigger: CTCTGGTCTCAGCCCAGCCCAACAGCAGGGGTGGGG...TTTCCGTCCATGGCTTTTGCCTGTTACTAAGGTAGTGGCTCTTTTTCTCCAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR CCA 90 bp | GGAAGACAGAAGTCCCTTCAGAAGAACCCGTATCCTTATTCATCCTCACCAGGGGGAAAGGACAGAGGCTaGCAGGTGTGTGCGTGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: GRQKSLQKNPYPYSSSPGGKDRG*QVCACG Trigger: ACCACACGCACACACCTGCCAGCCTCTGTCCTTTCC...CCCTGGTGAGGATGAATAAGGATACGGGTTCTTCTGAAGGGACTTCTGTCTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR CCA 90 bp | GAGGTCTCTTTTCCTGTTACCTCTGAGACCCATCCGGGCAGACCATCTTTTCTTGGAAAGGACAGAGGCTaGCAGGTGTGTGCGTGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: EVSFPVTSETHPGRPSFLGKDRG*QVCACG Trigger: ACCACACGCACACACCTGCCAGCCTCTGTCCTTTCC...AAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR CCA 90 bp | TCTCTTTTCCTGTTACCTCTGAGACCCATCCGGGCAGACCATCTTTTCTTCCTCGTGAACAGGAAGTGGTaGCCCCTAGACCCACATGCC | + |
|
Preference number: 2 (lower is better) Translates to: SLFLLPLRPIRADHLFFLVNRKW*PLDPHA Trigger: GGCATGTGGGTCTAGGGGCCACCACTTCCTGTTCAC...GAGGAAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR GCA 90 bp | GGAAGACAGAAGTCCCTTCAGAAGAACCCGTATCCTTATTCATCCTCACCAGGGGTCATAAGCATATACTaGAGCTCAACCGGCCGGCGC | + |
|
Preference number: 2 (lower is better) Translates to: GRQKSLQKNPYPYSSSPGVISIY*SSTGRR Trigger: GCGCCGGCCGGTTGAGCTGCAGTATATGCTTATGAC...CCCTGGTGAGGATGAATAAGGATACGGGTTCTTCTGAAGGGACTTCTGTCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR GCA 90 bp | TTCTGTGCCTCTGTTTTCTGGAGAAAAAGAGCCACTACCTTAGTAACAGGCAAAGCTGGTGGCAGCCGCTaGCCTGCCTCGGTTGGCTTA | + |
|
Preference number: 2 (lower is better) Translates to: FCASVFWRKRATTLVTGKAGGSR*PASVGL Trigger: TAAGCCAACCGAGGCAGGGCAGCGGCTGCCACCAGC...TTTGCCTGTTACTAAGGTAGTGGCTCTTTTTCTCCAGAAAACAGAGGCACAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR GCA 90 bp | ACACACCAGAACCCCAAACCCTTCCCAGGAAGGTCCCACATGGCCAACCCTCAATCCACCTTACCTCTCTaGTTTCTTCTCTACCCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: THQNPKPFPGRSHMANPQSTLPL*FLLYPK Trigger: TTTGGGGTAGAGAAGAAAGCAGAGAGGTAAGGTGGA...TTGAGGGTTGGCCATGTGGGACCTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR GCA 90 bp | CAGACCAGTGAAACATCAAGAAATGTGGCTCATAGGATGTTCTGTGTGGCTGGTAGCTACAGCCTCCCCTaGAGCTTCTCCAGACCCCAC | + |
|
Preference number: 2 (lower is better) Translates to: QTSETSRNVAHRMFCVAGSYSLP*SFSRPH Trigger: GTGGGGTCTGGAGAAGCTGCAGGGGAGGCTGTAGCT...ACCAGCCACACAGAACATCCTATGAGCCACATTTCTTGATGTTTCACTGGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR GCA 90 bp | ATCCCTCACCAGGACCAGAGTCACATGCCACATCGTCAGTCTGAAGCAGATGGCCTGACAAATCACTTATaGCCTGACCTCAATCGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: IPHQDQSHMPHRQSEADGLTNHL*PDLNRP Trigger: AGGGCGATTGAGGTCAGGGCATAAGTGATTTGTCAG...GCCATCTGCTTCAGACTGACGATGTGGCATGTGACTCTGGTCCTGGTGAGGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR GCA 90 bp | GAGGTCTCTTTTCCTGTTACCTCTGAGACCCATCCGGGCAGACCATCTTTTCTTGGCCAACCCTCAAAATaGCAGAGGCAGGAATCCCTC | + |
|
Preference number: 2 (lower is better) Translates to: EVSFPVTSETHPGRPSFLGQPSK*QRQESL Trigger: GAGGGATTCCTGCCTCTGGCATTTTGAGGGTTGGCC...AAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR-3UTR CCA 90 bp | AAACAGACAAAATTGCCTAGAGACACACCAGAACCCCAAACCCTTCCCAGGAAGGCCTCACTGAAGCCCTaGAAAGGACAGAGGCTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: KQTKLPRDTPEPQTLPRKASLKP*KGQRLA Trigger: TGCCAGCCTCTGTCCTTTCCAGGGCTTCAGTGAGGC...CTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGTCTCTAGGCAATTTTGTCTGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR CCA 90 bp | TTCTGGAGAAAAAGAGCCACTACCTTAGTAACAGGCAAAAGCCATGGACGGAAATCCTCACCAGGGGAGTaGCTGGCACTGGGACAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: FWRKRATTLVTGKSHGRKSSPGE*LALGQA Trigger: TGCCTGTCCCAGTGCCAGCCACTCCCCTGGTGAGGA...TTTCCGTCCATGGCTTTTGCCTGTTACTAAGGTAGTGGCTCTTTTTCTCCAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR TCA 90 bp | GCAGCATGCACCTTTTTCATAAACTTTGCTGAGTCTTTACACAGTCTGGCCTGTAGACCCCACAGGGCCTaGAGCAGCTCAGAGAGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: AACTFFINFAESLHSLACRPHRA*SSSERG Trigger: TCCTCTCTCTGAGCTGCTTCAGGCCCTGTGGGGTCT...ACAGGCCAGACTGTGTAAAGACTCAGCAAAGTTTATGAAAAAGGTGCATGCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR GCA 90 bp | GCGATAGGTAATTTCCAATGTCCAAACTGGTTAGGCTGGTATGGGCCCCTCAAGTCTTTTCCTCCCTTCTaGCTTCAGAGCCACCTGACC | + |
|
Preference number: 2 (lower is better) Translates to: AIGNFQCPNWLGWYGPLKSFPPF*LQSHLT Trigger: GGTCAGGTGGCTCTGAAGGCAGAAGGGAGGAAAAGA...CTTGAGGGGCCCATACCAGCCTAACCAGTTTGGACATTGGAAATTACCTATCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR GCA 90 bp | TCTCCTTCTCCATTGCTTTCTAGCTACAGCCTCCCCTGCAGCTTCTCCAGACCCTTAAACTACATCTTTTaGCTAGAGCCCAGCAGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: SPSPLLSSYSLPCSFSRPLNYIF*LEPSRA Trigger: AGCCCTGCTGGGCTCTAGGCAAAAGATGTAGTTTAA...GGGTCTGGAGAAGCTGCAGGGGAGGCTGTAGCTAGAAAGCAATGGAGAAGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR CCA 90 bp | TTCTGTGCCTCTGTTTTCTGGAGAAAAAGAGCCACTACCTTAGTAACAGGCAAACCCCTGCTGTTGGGCTaGGCTGAGACCAGAGTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: FCASVFWRKRATTLVTGKPLLLG*AETRVR Trigger: CCTCACTCTGGTCTCAGCCCAGCCCAACAGCAGGGG...TTTGCCTGTTACTAAGGTAGTGGCTCTTTTTCTCCAGAAAACAGAGGCACAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR CCA 90 bp | GAGGTCTCTTTTCCTGTTACCTCTGAGACCCATCCGGGCAGACCATCTTTTCTTCTGGTCTGTGGGGTATaGGCAGCATGCACCTTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: EVSFPVTSETHPGRPSFLLVCGV*AACTFF Trigger: GAAAAAGGTGCATGCTGCCCATACCCCACAGACCAG...AAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGACCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR TCA 90 bp | TCTCTTTTCCTGTTACCTCTGAGACCCATCCGGGCAGACCATCTTTTCTTCCTCTCTGGCCAAGGTCAGTaGATAAATATGGGACAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: SLFLLPLRPIRADHLFFLSGQGQ*INMGQG Trigger: CCCCTGTCCCATATTTATTCACTGACCTTGGCCAGA...GAGGAAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR GCA 90 bp | TCTCTTTTCCTGTTACCTCTGAGACCCATCCGGGCAGACCATCTTTTCTTCCTCCCTCTCCTTCTCCATTaGTTTCTAGCTACAGCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: SLFLLPLRPIRADHLFFLPLLLH*FLATAS Trigger: GGAGGCTGTAGCTAGAAAGCAATGGAGAAGGAGAGG...GAGGAAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR CCA 90 bp | GCAGCATGCACCTTTTTCATAAACTTTGCTGAGTCTTTACACAGTCTGGCCTGTGGAAAGGACAGAGGCTaGCAGGTGTGTGCGTGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: AACTFFINFAESLHSLACGKDRG*QVCACG Trigger: ACCACACGCACACACCTGCCAGCCTCTGTCCTTTCC...ACAGGCCAGACTGTGTAAAGACTCAGCAAAGTTTATGAAAAAGGTGCATGCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR CCA 90 bp | CAGACCAGTGAAACATCAAGAAATGTGGCTCATAGGATGTTCTGTGTGGCTGGTGGAGTGGTTATGGGGTaGGGGACTCTTCCAAGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: QTSETSRNVAHRMFCVAGGVVMG*GTLPRA Trigger: TGCTCTTGGAAGAGTCCCCCACCCCATAACCACTCC...ACCAGCCACACAGAACATCCTATGAGCCACATTTCTTGATGTTTCACTGGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR TCA 90 bp | ATCCCTCACCAGGACCAGAGTCACATGCCACATCGTCAGTCTGAAGCAGATGGCAAAAATGCAGACCAGTaGAACATCAAGAAATGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: IPHQDQSHMPHRQSEADGKNADQ*NIKKCG Trigger: GCCACATTTCTTGATGTTTCACTGGTCTGCATTTTT...GCCATCTGCTTCAGACTGACGATGTGGCATGTGACTCTGGTCCTGGTGAGGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR GCA 90 bp | CAGACCAGTGAAACATCAAGAAATGTGGCTCATAGGATGTTCTGTGTGGCTGGTTCTTTTCCTCCCTTCTaGCTTCAGAGCCACCTGACC | + |
|
Preference number: 2 (lower is better) Translates to: QTSETSRNVAHRMFCVAGSFPPF*LQSHLT Trigger: GGTCAGGTGGCTCTGAAGGCAGAAGGGAGGAAAAGA...ACCAGCCACACAGAACATCCTATGAGCCACATTTCTTGATGTTTCACTGGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR GCA 90 bp | GCAGCATGCACCTTTTTCATAAACTTTGCTGAGTCTTTACACAGTCTGGCCTGTGGCCAACCCTCAAAATaGCAGAGGCAGGAATCCCTC | + |
|
Preference number: 2 (lower is better) Translates to: AACTFFINFAESLHSLACGQPSK*QRQESL Trigger: GAGGGATTCCTGCCTCTGGCATTTTGAGGGTTGGCC...ACAGGCCAGACTGTGTAAAGACTCAGCAAAGTTTATGAAAAAGGTGCATGCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR TCA 90 bp | TCTCTTTTCCTGTTACCTCTGAGACCCATCCGGGCAGACCATCTTTTCTTCCTCTGGCCTTTCTGCAACTaGACCACTTCTGACAAATCA | + |
|
Preference number: 2 (lower is better) Translates to: SLFLLPLRPIRADHLFFLWPFCN*TTSDKS Trigger: TGATTTGTCAGAAGTGGTTCAGTTGCAGAAAGGCCA...GAGGAAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR TCA 90 bp | GAGGTCTCTTTTCCTGTTACCTCTGAGACCCATCCGGGCAGACCATCTTTTCTTTGGCCTTTCTGCAACTaGACCACTTCTGACAAATCA | + |
|
Preference number: 2 (lower is better) Translates to: EVSFPVTSETHPGRPSFLWPFCN*TTSDKS Trigger: TGATTTGTCAGAAGTGGTTCAGTTGCAGAAAGGCCA...AAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGACCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR GCA 90 bp | TTCTGGAGAAAAAGAGCCACTACCTTAGTAACAGGCAAAAGCCATGGACGGAAATCTTTTCCTCCCTTCTaGCTTCAGAGCCACCTGACC | + |
|
Preference number: 2 (lower is better) Translates to: FWRKRATTLVTGKSHGRKSFPPF*LQSHLT Trigger: GGTCAGGTGGCTCTGAAGGCAGAAGGGAGGAAAAGA...TTTCCGTCCATGGCTTTTGCCTGTTACTAAGGTAGTGGCTCTTTTTCTCCAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR GCA 90 bp | TCTCTTTTCCTGTTACCTCTGAGACCCATCCGGGCAGACCATCTTTTCTTCCTCTTAAACTACATCTTTTaGCTAGAGCCCAGCAGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: SLFLLPLRPIRADHLFFLLNYIF*LEPSRA Trigger: AGCCCTGCTGGGCTCTAGGCAAAAGATGTAGTTTAA...GAGGAAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR GCA 90 bp | TTCTGGAGAAAAAGAGCCACTACCTTAGTAACAGGCAAAAGCCATGGACGGAAATACACCTGGCAGAGATaGAGGGTGTCTGACTCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: FWRKRATTLVTGKSHGRKYTWQR*RVSDSE Trigger: CTCAGAGTCAGACACCCTGCATCTCTGCCAGGTGTA...TTTCCGTCCATGGCTTTTGCCTGTTACTAAGGTAGTGGCTCTTTTTCTCCAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR GCA 90 bp | TCTCTTTTCCTGTTACCTCTGAGACCCATCCGGGCAGACCATCTTTTCTTCCTCTCCACCTTACCTCTCTaGTTTCTTCTCTACCCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: SLFLLPLRPIRADHLFFLSTLPL*FLLYPK Trigger: TTTGGGGTAGAGAAGAAAGCAGAGAGGTAAGGTGGA...GAGGAAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR GCA 90 bp | CAGACCAGTGAAACATCAAGAAATGTGGCTCATAGGATGTTCTGTGTGGCTGGTCCTCTCCTTCTCCATTaGTTTCTAGCTACAGCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: QTSETSRNVAHRMFCVAGPLLLH*FLATAS Trigger: GGAGGCTGTAGCTAGAAAGCAATGGAGAAGGAGAGG...ACCAGCCACACAGAACATCCTATGAGCCACATTTCTTGATGTTTCACTGGTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR CCA 90 bp | TTCTGTGCCTCTGTTTTCTGGAGAAAAAGAGCCACTACCTTAGTAACAGGCAAAGGAGTGGTTATGGGGTaGGGGACTCTTCCAAGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: FCASVFWRKRATTLVTGKGVVMG*GTLPRA Trigger: TGCTCTTGGAAGAGTCCCCCACCCCATAACCACTCC...TTTGCCTGTTACTAAGGTAGTGGCTCTTTTTCTCCAGAAAACAGAGGCACAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR GCA 90 bp | AAACAGACAAAATTGCCTAGAGACACACCAGAACCCCAAACCCTTCCCAGGAAGTTAAACTACATCTTTTaGCTAGAGCCCAGCAGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: KQTKLPRDTPEPQTLPRKLNYIF*LEPSRA Trigger: AGCCCTGCTGGGCTCTAGGCAAAAGATGTAGTTTAA...CTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGTCTCTAGGCAATTTTGTCTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR TCA 90 bp | TTCTGTGCCTCTGTTTTCTGGAGAAAAAGAGCCACTACCTTAGTAACAGGCAAATCACCATTTGATCAGTaGCAGAAAGAGGGACGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: FCASVFWRKRATTLVTGKSPFDQ*QKEGRG Trigger: CCCACGTCCCTCTTTCTGTCACTGATCAAATGGTGA...TTTGCCTGTTACTAAGGTAGTGGCTCTTTTTCTCCAGAAAACAGAGGCACAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR TCA 90 bp | GCAGCATGCACCTTTTTCATAAACTTTGCTGAGTCTTTACACAGTCTGGCCTGTGTTCTGGTCACCATTTaGTCAGTGACAGAAAGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: AACTFFINFAESLHSLACVLVTI*SVTERG Trigger: CCCTCTTTCTGTCACTGATCAAATGGTGACCAGAAC...ACAGGCCAGACTGTGTAAAGACTCAGCAAAGTTTATGAAAAAGGTGCATGCTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR TCA 90 bp | TTCTGTGCCTCTGTTTTCTGGAGAAAAAGAGCCACTACCTTAGTAACAGGCAAATCTGGCCAAGGTCAGTaGATAAATATGGGACAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: FCASVFWRKRATTLVTGKSGQGQ*INMGQG Trigger: CCCCTGTCCCATATTTATTCACTGACCTTGGCCAGA...TTTGCCTGTTACTAAGGTAGTGGCTCTTTTTCTCCAGAAAACAGAGGCACAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR TCA 90 bp | CAGACCAGTGAAACATCAAGAAATGTGGCTCATAGGATGTTCTGTGTGGCTGGTCAACTGAACCACTTCTaGCAAATCACTTATGCCCTG | + |
|
Preference number: 2 (lower is better) Translates to: QTSETSRNVAHRMFCVAGQLNHF*QITYAL Trigger: CAGGGCATAAGTGATTTGTCAGAAGTGGTTCAGTTG...ACCAGCCACACAGAACATCCTATGAGCCACATTTCTTGATGTTTCACTGGTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR TCA 90 bp | GAGGTCTCTTTTCCTGTTACCTCTGAGACCCATCCGGGCAGACCATCTTTTCTTAAAAATGCAGACCAGTaGAACATCAAGAAATGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: EVSFPVTSETHPGRPSFLKNADQ*NIKKCG Trigger: GCCACATTTCTTGATGTTTCACTGGTCTGCATTTTT...AAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGACCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR GCA 90 bp | TTCTGGAGAAAAAGAGCCACTACCTTAGTAACAGGCAAAAGCCATGGACGGAAACTGACAAATCACTTATaGCCTGACCTCAATCGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: FWRKRATTLVTGKSHGRKLTNHL*PDLNRP Trigger: AGGGCGATTGAGGTCAGGGCATAAGTGATTTGTCAG...TTTCCGTCCATGGCTTTTGCCTGTTACTAAGGTAGTGGCTCTTTTTCTCCAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR GCA 90 bp | TCTCTTTTCCTGTTACCTCTGAGACCCATCCGGGCAGACCATCTTTTCTTCCTCGAAAACAGACAAAATTaGCTAGAGACACACCAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: SLFLLPLRPIRADHLFFLENRQN*LETHQN Trigger: GTTCTGGTGTGTCTCTAGGCAATTTTGTCTGTTTTC...GAGGAAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR TCA 90 bp | TTCTGTGCCTCTGTTTTCTGGAGAAAAAGAGCCACTACCTTAGTAACAGGCAAAGTTCTGGTCACCATTTaGTCAGTGACAGAAAGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: FCASVFWRKRATTLVTGKVLVTI*SVTERG Trigger: CCCTCTTTCTGTCACTGATCAAATGGTGACCAGAAC...TTTGCCTGTTACTAAGGTAGTGGCTCTTTTTCTCCAGAAAACAGAGGCACAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR GCA 90 bp | TTCTGGAGAAAAAGAGCCACTACCTTAGTAACAGGCAAAAGCCATGGACGGAAAGAAAACAGACAAAATTaGCTAGAGACACACCAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: FWRKRATTLVTGKSHGRKENRQN*LETHQN Trigger: GTTCTGGTGTGTCTCTAGGCAATTTTGTCTGTTTTC...TTTCCGTCCATGGCTTTTGCCTGTTACTAAGGTAGTGGCTCTTTTTCTCCAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR GCA 72 bp | GGCTGGTATGGGCCCCTCAAGGCTGGTGGCAGCCGCTaGCCTGCCTCGGTTGGCTTAGGCGAGAATCTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: GWYGPLKAGGSR*PASVGLGENLQ Trigger: CTGGAGATTCTCGCCTAAGCCAACCGAGGCAGGGCAGCGGCTGCCACCAGCCTTGAGGGGCCCATACCAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR CCA 72 bp | GCTATAGCCAGAAGCCACCCGGCTCAGTTGGTCCCATaGGGGAGGCATGCCGGTGTCCCTGTCCAGGGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: AIARSHPAQLVP*GRHAGVPVQGH Trigger: GTGGCCCTGGACAGGGACACCGGCATGCCTCCCCCATGGGACCAACTGAGCCGGGTGGCTTCTGGCTATAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR CCA 72 bp | AAACTGGTTAGGCTGGTATGGGCCCCTCAAGGCTGGTaGCAGCCGCTGCCCTGCCTCGGTTGGCTTAGGCGA | + |
|
Preference number: 3 (lower is better) Translates to: KLVRLVWAPQGW*QPLPCLGWLRR Trigger: TCGCCTAAGCCAACCGAGGCAGGGCAGCGGCTGCCACCAGCCTTGAGGGGCCCATACCAGCCTAACCAGTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR CCA 72 bp | TCCAAACTGGTTAGGCTGGTATGGGCCCCTCAAGGCTaGTGGCAGCCGCTGCCCTGCCTCGGTTGGCTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: SKLVRLVWAPQG*WQPLPCLGWLR Trigger: CCTAAGCCAACCGAGGCAGGGCAGCGGCTGCCACCAGCCTTGAGGGGCCCATACCAGCCTAACCAGTTTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR CCA 72 bp | CCCTGGAAAGGACAGAGGCTGGCAGGTGTGTGCGTGTaGTGGCAATGGCGGTGTGTAGGTGTTGGGGGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: PWKGQRLAGVCV*WQWRCVGVGGG Trigger: CCCTCCCCCAACACCTACACACCGCCATTGCCACCACACGCACACACCTGCCAGCCTCTGTCCTTTCCAGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR CAA 90 bp | CCCAGGGCTTTGACAGCCTGGGAGGAGGTGCTAAGTACACCTGGCAGAGATGCACCCCCACCCCTGCTGTaGGGCTGGGCTGAGACCAGA | + |
|
Preference number: 3 (lower is better) Translates to: PRALTAWEEVLSTPGRDAPPPLL*GWAETR Trigger: TCTGGTCTCAGCCCAGCCCAACAGCAGGGGTGGGGG...TGCATCTCTGCCAGGTGTACTTAGCACCTCCTCCCAGGCTGTCAAAGCCCTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR CAA 90 bp | CCGGCGCTAACACTGTCATGGGCATACAGTCCTGGCTCTGTCCCAGGAGCTAAGCCCCCACCCCTGCTGTaGGGCTGGGCTGAGACCAGA | + |
|
Preference number: 3 (lower is better) Translates to: PALTLSWAYSPGSVPGAKPPPLL*GWAETR Trigger: TCTGGTCTCAGCCCAGCCCAACAGCAGGGGTGGGGG...CTTAGCTCCTGGGACAGAGCCAGGACTGTATGCCCATGACAGTGTTAGCGCCGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR CCA 72 bp | TGTGTGCGTGTGGTGGCAATGGCGGTGTGTAGGTGTTaGGGGAGGGTGCTCCAGACCTCAGTCTGGCCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: CVRVVAMAVCRC*GRVLQTSVWPR Trigger: CCTTGGCCAGACTGAGGTCTGGAGCACCCTCCCCCAACACCTACACACCGCCATTGCCACCACACGCACACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR CCA 72 bp | TGGAAAGGACAGAGGCTGGCAGGTGTGTGCGTGTGGTaGCAATGGCGGTGTGTAGGTGTTGGGGGAGGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: WKGQRLAGVCVW*QWRCVGVGGGC Trigger: GCACCCTCCCCCAACACCTACACACCGCCATTGCCACCACACGCACACACCTGCCAGCCTCTGTCCTTTCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR CCA 72 bp | CCTCAAGGCTGGTGGCAGCCGCTGCCCTGCCTCGGTTaGCTTAGGCGAGAATCTCCAGAACACTGTTCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: PQGWWQPLPCLG*LRRESPEHCSG Trigger: ACCAGAACAGTGTTCTGGAGATTCTCGCCTAAGCCAACCGAGGCAGGGCAGCGGCTGCCACCAGCCTTGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR CAA 90 bp | ATCCCTCACCAGGACCAGAGTCACATGCCACATCGTCAGTCTGAAGCAGATGGCAGCCACCCGGCTCAGTaGGTCCCATGGGGGAGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: IPHQDQSHMPHRQSEADGSHPAQ*VPWGRH Trigger: ATGCCTCCCCCATGGGACCAACTGAGCCGGGTGGCT...GCCATCTGCTTCAGACTGACGATGTGGCATGTGACTCTGGTCCTGGTGAGGGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR TCA 72 bp | TCACCAGGACCAGAGTCACATGCCACATCGTCAGTCTaGAGCAGATGGCTGCAGGCAGGCAGGGTTAGCGTG | + |
|
Preference number: 3 (lower is better) Translates to: SPGPESHATSSV*SRWLQAGRVSV Trigger: CACGCTAACCCTGCCTGCCTGCAGCCATCTGCTTCAGACTGACGATGTGGCATGTGACTCTGGTCCTGGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR GCA 72 bp | CTTCCCAGGAAGGTCCCACATGGCCAACCCTCAAAATaGCAGAGGCAGGAATCCCTCGTCTTCCACCCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: LPRKVPHGQPSK*QRQESLVFHPV Trigger: GACTGGGTGGAAGACGAGGGATTCCTGCCTCTGGCATTTTGAGGGTTGGCCATGTGGGACCTTCCTGGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR CCA 72 bp | AGGGTTAGCGTGCAGGAAGATGAGCCTCCCGGGCACTaGTCTGTGGGGTATGGGCAGCATGCACCTTTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: RVSVQEDEPPGH*SVGYGQHAPFS Trigger: TGAAAAAGGTGCATGCTGCCCATACCCCACAGACCAGTGCCCGGGAGGCTCATCTTCCTGCACGCTAACCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR CCA 72 bp | GCGATAGGTAATTTCCAATGTCCAAACTGGTTAGGCTaGTATGGGCCCCTCAAGGCTGGTGGCAGCCGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: AIGNFQCPNWLG*YGPLKAGGSRC Trigger: GCAGCGGCTGCCACCAGCCTTGAGGGGCCCATACCAGCCTAACCAGTTTGGACATTGGAAATTACCTATCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR CCA 72 bp | ACCTTACCTCTCTGCTTTCTTCTCTACCCCAAACCCTaGGCTGGGCTTAGCAGACAGTGGCATGGGGTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: TLPLCFLLYPKP*AGLSRQWHGVG Trigger: TCCCACCCCATGCCACTGTCTGCTAAGCCCAGCCCAGGGTTTGGGGTAGAGAAGAAAGCAGAGAGGTAAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR CCA 72 bp | ACCAGAACCCCAAACCCTTCCCAGGAAGGTCCCACATaGCCAACCCTCAAAATGCCAGAGGCAGGAATCCCT | + |
|
Preference number: 3 (lower is better) Translates to: TRTPNPSQEGPT*PTLKMPEAGIP Trigger: AGGGATTCCTGCCTCTGGCATTTTGAGGGTTGGCCATGTGGGACCTTCCTGGGAAGGGTTTGGGGTTCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR TCA 72 bp | CAGGTGCTGAGGCGAGGTCTCTTTTCCTGTTACCTCTaGGACCCATCCGGGCAGACCATCTTTTCTTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: QVLRRGLFSCYL*DPSGQTIFSSS Trigger: GGAGGAAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGACCTCGCCTCAGCACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR CCA 72 bp | GCGTGCAGGAAGATGAGCCTCCCGGGCACTGGTCTGTaGGGTATGGGCAGCATGCACCTTTTTCATAAACTT | + |
|
Preference number: 3 (lower is better) Translates to: ACRKMSLPGTGL*GMGSMHLFHKL Trigger: AAGTTTATGAAAAAGGTGCATGCTGCCCATACCCCACAGACCAGTGCCCGGGAGGCTCATCTTCCTGCACGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR CAA 90 bp | TTCTGGAGAAAAAGAGCCACTACCTTAGTAACAGGCAAAAGCCATGGACGGAAACCCCCACCCCTGCTGTaGGGCTGGGCTGAGACCAGA | + |
|
Preference number: 3 (lower is better) Translates to: FWRKRATTLVTGKSHGRKPPPLL*GWAETR Trigger: TCTGGTCTCAGCCCAGCCCAACAGCAGGGGTGGGGG...TTTCCGTCCATGGCTTTTGCCTGTTACTAAGGTAGTGGCTCTTTTTCTCCAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR GCA 72 bp | GCTCAGAGAGAGGACTCTCTTTCCACCTTACCTCTCTaGTTTCTTCTCTACCCCAAACCCTGGGCTGGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: AQREDSLSTLPL*FLLYPKPWAGL Trigger: AAGCCCAGCCCAGGGTTTGGGGTAGAGAAGAAAGCAGAGAGGTAAGGTGGAAAGAGAGTCCTCTCTCTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR CCA 72 bp | GGCTTTGACAGCCTGGGAGGAGGTGCTAAGTACACCTaGCAGAGATGCAGGGTGTCTGACTCTGAGGTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: GFDSLGGGAKYT*QRCRVSDSEVK Trigger: TTTAACCTCAGAGTCAGACACCCTGCATCTCTGCCAGGTGTACTTAGCACCTCCTCCCAGGCTGTCAAAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR CAA 90 bp | TTCTGGAGAAAAAGAGCCACTACCTTAGTAACAGGCAAAAGCCATGGACGGAAAAGCCACCCGGCTCAGTaGGTCCCATGGGGGAGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: FWRKRATTLVTGKSHGRKSHPAQ*VPWGRH Trigger: ATGCCTCCCCCATGGGACCAACTGAGCCGGGTGGCT...TTTCCGTCCATGGCTTTTGCCTGTTACTAAGGTAGTGGCTCTTTTTCTCCAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR TCA 72 bp | ACACCCCCACTGGCCTTTCTGCAACTGAACCACTTCTaGCAAATCACTTATGCCCTGACCTCAATCGCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: TPPLAFLQLNHF*QITYALTSIAL Trigger: GAGGGCGATTGAGGTCAGGGCATAAGTGATTTGTCAGAAGTGGTTCAGTTGCAGAAAGGCCAGTGGGGGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR GCA 72 bp | GCCTCCCGGGCACTGGTCTGTGGGGTATGGGCAGCATaGACCTTTTTCATAAACTTTGCTGAGTCTTTACAC | + |
|
Preference number: 3 (lower is better) Translates to: ASRALVCGVWAA*TFFINFAESLH Trigger: GTGTAAAGACTCAGCAAAGTTTATGAAAAAGGTGCATGCTGCCCATACCCCACAGACCAGTGCCCGGGAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR CCA 72 bp | GAGCCCAGCAGGGCTGTTAACCCTCTACCAAAGAACTaGGTTAGACCAGACACACTGTCTTCTTGCCTCACT | + |
|
Preference number: 3 (lower is better) Translates to: EPSRAVNPLPKN*VRPDTLSSCLT Trigger: AGTGAGGCAAGAAGACAGTGTGTCTGGTCTAACCCAGTTCTTTGGTAGAGGGTTAACAGCCCTGCTGGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR CCA 72 bp | CAAATAGCAGCGATAGGTAATTTCCAATGTCCAAACTaGTTAGGCTGGTATGGGCCCCTCAAGGCTGGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: QIAAIGNFQCPN*LGWYGPLKAGG Trigger: GCCACCAGCCTTGAGGGGCCCATACCAGCCTAACCAGTTTGGACATTGGAAATTACCTATCGCTGCTATTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR-3UTR CAA 90 bp | TCTCTTTTCCTGTTACCTCTGAGACCCATCCGGGCAGACCATCTTTTCTTCCTCTCCTCTCCTTCTCCATaGCTTTCTAGCTACAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: SLFLLPLRPIRADHLFFLSSPSP*LSSYSL Trigger: GAGGCTGTAGCTAGAAAGCAATGGAGAAGGAGAGGA...GAGGAAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR GCA 72 bp | CACACGCCAGCGCCTAACTTTGAAAGTGCTTCAATCTaGAAGCCCGTGGCAGGAATTTTTGTGGGGTTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: HTPAPNFESASI*KPVAGIFVGFV Trigger: AACAAACCCCACAAAAATTCCTGCCACGGGCTTGCAGATTGAAGCACTTTCAAAGTTAGGCGCTGGCGTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205228.3 |
||
| 3UTR GCA 72 bp | CCATCCAGGGTCAGATCGATATGGACTGTCATTCTGTaGCTCTGTTTTCTGGAGAAAAAGAGCCACTACCTT | + |
|
Preference number: 3 (lower is better) Translates to: PSRVRSIWTVIL*LCFLEKKSHYL Trigger: AAGGTAGTGGCTCTTTTTCTCCAGAAAACAGAGGCACAGAATGACAGTCCATATCGATCTGACCCTGGATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR CCA 72 bp | GTGTATAAAATAATAGAAATCTGGGCCGCATCAAAATaGCTGCCCAGGATGCACACGCCAGCGCCTAACTTT | + |
|
Preference number: 3 (lower is better) Translates to: VYKIIEIWAASK*LPRMHTPAPNF Trigger: AAAGTTAGGCGCTGGCGTGTGCATCCTGGGCAGCCATTTTGATGCGGCCCAGATTTCTATTATTTTATACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205228.3 |
||
| 3UTR CCA 72 bp | GATCGATATGGACTGTCATTCTGTGCCTCTGTTTTCTaGAGAAAAAGAGCCACTACCTTAGTAACAGGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: DRYGLSFCASVF*RKRATTLVTGK Trigger: TTTGCCTGTTACTAAGGTAGTGGCTCTTTTTCTCCAGAAAACAGAGGCACAGAATGACAGTCCATATCGATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR TCA 72 bp | CACAGTTTATTACGGAAGCCAATAAAAGAGCCACATTaGGTATTTCACAAAATGCATGGCATTCATTGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: HSLLRKPIKEPH*VFHKMHGIHCC Trigger: ACAACAATGAATGCCATGCATTTTGTGAAATACTCAATGTGGCTCTTTTATTGGCTTCCGTAATAAACTGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205228.3 |
||
| CDS-3UTR CCA 90 bp | CCTCAAGGCTGGTGGCAGCCGCTGCCCTGCCTCGGTTGGCTTAGGCGAGAATCTCCATGCAGCAGGCCCTaGGCCCGCAGTTCCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PQGWWQPLPCLGWLRRESPCSRP*ARSSSL Trigger: GAGGGAGGAACTGCGGGCCCAGGGCCTGCTGCATGG...AGATTCTCGCCTAAGCCAACCGAGGCAGGGCAGCGGCTGCCACCAGCCTTGAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR CAA 72 bp | GGGAGCCCAGCTATAGCCAGAAGCCACCCGGCTCAGTaGGTCCCATGGGGGAGGCATGCCGGTGTCCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GSPAIARSHPAQ*VPWGRHAGVPV Trigger: GACAGGGACACCGGCATGCCTCCCCCATGGGACCAACTGAGCCGGGTGGCTTCTGGCTATAGCTGGGCTCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR TCA 90 bp | ATCCCTCACCAGGACCAGAGTCACATGCCACATCGTCAGTCTGAAGCAGATGGCGGTAGCGCAGGCTGCTaGGCGTGTCCAGGCGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: IPHQDQSHMPHRQSEADGGSAGC*ACPGAG Trigger: CCCTGCGCCTGGACACGCTCAGCAGCCTGCGCTACC...GCCATCTGCTTCAGACTGACGATGTGGCATGTGACTCTGGTCCTGGTGAGGGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR TCA 90 bp | TCTCCTTCTCCATTGCTTTCTAGCTACAGCCTCCCCTGCAGCTTCTCCAGACCCGGTAGCGCAGGCTGCTaGGCGTGTCCAGGCGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPSPLLSSYSLPCSFSRPGSAGC*ACPGAG Trigger: CCCTGCGCCTGGACACGCTCAGCAGCCTGCGCTACC...GGGTCTGGAGAAGCTGCAGGGGAGGCTGTAGCTAGAAAGCAATGGAGAAGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR TCA 90 bp | CCCAGGGCTTTGACAGCCTGGGAGGAGGTGCTAAGTACACCTGGCAGAGATGCAAGACGGGGACCAGAGTaGTGCGAGGGAAGGTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRALTAWEEVLSTPGRDARRGPE*CEGRSG Trigger: CCCGGACCTTCCCTCGCATCACTCTGGTCCCCGTCT...TGCATCTCTGCCAGGTGTACTTAGCACCTCCTCCCAGGCTGTCAAAGCCCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR CCA 90 bp | CCTCAAGGCTGGTGGCAGCCGCTGCCCTGCCTCGGTTGGCTTAGGCGAGAATCTTTGATGGCCTCAGGCTaGCTGCTCCAGGCTCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PQGWWQPLPCLGWLRRESLMASG*LLQARS Trigger: ACTTCGAGCCTGGAGCAGCCAGCCTGAGGCCATCAA...AGATTCTCGCCTAAGCCAACCGAGGCAGGGCAGCGGCTGCCACCAGCCTTGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR CCA 90 bp | CCTAGAGACACACCAGAACCCCAAACCCTTCCCAGGAAGGTCCCACATGGCCAACCATGCAGCAGGCCCTaGGCCCGCAGTTCCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PRDTPEPQTLPRKVPHGQPCSRP*ARSSSL Trigger: GAGGGAGGAACTGCGGGCCCAGGGCCTGCTGCATGG...TTGGCCATGTGGGACCTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGTCTCTAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR CCA 90 bp | CTGTCATGGGCATACAGTCCTGGCTCTGTCCCAGGAGCTAAGCTAGGTGGCAGTCCATGCAGCAGGCCCTaGGCCCGCAGTTCCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSWAYSPGSVPGAKLGGSPCSRP*ARSSSL Trigger: GAGGGAGGAACTGCGGGCCCAGGGCCTGCTGCATGG...ACTGCCACCTAGCTTAGCTCCTGGGACAGAGCCAGGACTGTATGCCCATGACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR GCA 90 bp | CCGGCGCTAACACTGTCATGGGCATACAGTCCTGGCTCTGTCCCAGGAGCTAAGAGGTCTGCAGCACAGTaGGGTAGCCGCCTGAGACGG | + |
|
Preference number: 4 (lower is better) Translates to: PALTLSWAYSPGSVPGAKRSAAQ*GSRLRR Trigger: CCGTCTCAGGCGGCTACCGCACTGTGCTGCAGACCT...CTTAGCTCCTGGGACAGAGCCAGGACTGTATGCCCATGACAGTGTTAGCGCCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR GCA 90 bp | CTGTCATGGGCATACAGTCCTGGCTCTGTCCCAGGAGCTAAGCTAGGTGGCAGTGCTTGGCCAAGTGCTTaGCCAGGCAGGTCCGCACGC | + |
|
Preference number: 4 (lower is better) Translates to: LSWAYSPGSVPGAKLGGSAWPSA*PGRSAR Trigger: GCGTGCGGACCTGCCTGGGCAAGCACTTGGCCAAGC...ACTGCCACCTAGCTTAGCTCCTGGGACAGAGCCAGGACTGTATGCCCATGACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR GCA 90 bp | CCCAGGGCTTTGACAGCCTGGGAGGAGGTGCTAAGTACACCTGGCAGAGATGCAAGGCCATCCACGGGGTaGAAGACGGGGACCAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PRALTAWEEVLSTPGRDARPSTG*KTGTRV Trigger: CACTCTGGTCCCCGTCTTGCACCCCGTGGATGGCCT...TGCATCTCTGCCAGGTGTACTTAGCACCTCCTCCCAGGCTGTCAAAGCCCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR TCA 90 bp | CCGGCGCTAACACTGTCATGGGCATACAGTCCTGGCTCTGTCCCAGGAGCTAAGGACCAGTCTCTCCGATaGGCGGGAATCCCATGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PALTLSWAYSPGSVPGAKDQSLR*AGIPWS Trigger: GCTCCATGGGATTCCCGCTCATCGGAGAGACTGGTC...CTTAGCTCCTGGGACAGAGCCAGGACTGTATGCCCATGACAGTGTTAGCGCCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR TCA 90 bp | CCTCAAGGCTGGTGGCAGCCGCTGCCCTGCCTCGGTTGGCTTAGGCGAGAATCTAGTCGCTGGGCCTCCTaGTATACATTGATGGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PQGWWQPLPCLGWLRRESSRWAS*YTLMAS Trigger: TGAGGCCATCAATGTATATCAGGAGGCCCAGCGACT...AGATTCTCGCCTAAGCCAACCGAGGCAGGGCAGCGGCTGCCACCAGCCTTGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR GCA 90 bp | CCTAGAGACACACCAGAACCCCAAACCCTTCCCAGGAAGGTCCCACATGGCCAATCCGCGGCCACTCGGTaGTCACTAGCTGGTGTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: PRDTPEPQTLPRKVPHGQSAATR*SLAGVR Trigger: GCGAACACCAGCTAGTGAGCACCGAGTGGCCGCGGA...TTGGCCATGTGGGACCTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGTCTCTAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR GCA 90 bp | CCTAGAGACACACCAGAACCCCAAACCCTTCCCAGGAAGGTCCCACATGGCCAAAGGTCTGCAGCACAGTaGGGTAGCCGCCTGAGACGG | + |
|
Preference number: 4 (lower is better) Translates to: PRDTPEPQTLPRKVPHGQRSAAQ*GSRLRR Trigger: CCGTCTCAGGCGGCTACCGCACTGTGCTGCAGACCT...TTGGCCATGTGGGACCTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGTCTCTAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR GCA 90 bp | TCTCCTTCTCCATTGCTTTCTAGCTACAGCCTCCCCTGCAGCTTCTCCAGACCCGCTTGGCCAAGTGCTTaGCCAGGCAGGTCCGCACGC | + |
|
Preference number: 4 (lower is better) Translates to: SPSPLLSSYSLPCSFSRPAWPSA*PGRSAR Trigger: GCGTGCGGACCTGCCTGGGCAAGCACTTGGCCAAGC...GGGTCTGGAGAAGCTGCAGGGGAGGCTGTAGCTAGAAAGCAATGGAGAAGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR GCA 90 bp | TGGCCAAGGTCAGTGAATAAATATGGGACAGGGGCAAGGGTAGGTAGCGGGGAGGCTTGGCCAAGTGCTTaGCCAGGCAGGTCCGCACGC | + |
|
Preference number: 4 (lower is better) Translates to: WPRSVNKYGTGARVGSGEAWPSA*PGRSAR Trigger: GCGTGCGGACCTGCCTGGGCAAGCACTTGGCCAAGC...CTCCCCGCTACCTACCCTTGCCCCTGTCCCATATTTATTCACTGACCTTGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR GCA 90 bp | CCCAGGGCTTTGACAGCCTGGGAGGAGGTGCTAAGTACACCTGGCAGAGATGCAAACAGCTTGGCCAAGTaGTTGCCCAGGCAGGTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PRALTAWEEVLSTPGRDANSLAK*LPRQVR Trigger: GCGGACCTGCCTGGGCAAGCACTTGGCCAAGCTGTT...TGCATCTCTGCCAGGTGTACTTAGCACCTCCTCCCAGGCTGTCAAAGCCCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR GCA 90 bp | GGCTTTGACAGCCTGGGAGGAGGTGCTAAGTACACCTGGCAGAGATGCAGGGTGGCTGGCCAGCTCCACTaGCAGCACCTTCAGGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: GFDSLGGGAKYTWQRCRVAGQLH*QHLQEQ Trigger: CTGTTCCTGAAGGTGCTGGCAGTGGAGCTGGCCAGC...CACCCTGCATCTCTGCCAGGTGTACTTAGCACCTCCTCCCAGGCTGTCAAAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR GCA 90 bp | AGAGACACACCAGAACCCCAAACCCTTCCCAGGAAGGTCCCACATGGCCAACCCGCTGGCCAGCTCCACTaGCAGCACCTTCAGGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: RDTPEPQTLPRKVPHGQPAGQLH*QHLQEQ Trigger: CTGTTCCTGAAGGTGCTGGCAGTGGAGCTGGCCAGC...GGGTTGGCCATGTGGGACCTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGTCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR CCA 90 bp | GGCTTTGACAGCCTGGGAGGAGGTGCTAAGTACACCTGGCAGAGATGCAGGGTGATCCCATGGAGCCCTTaGGGATGGGCAGCTTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GFDSLGGGAKYTWQRCRVIPWSP*GWAACS Trigger: GCTGCAAGCTGCCCATCCCCAAGGGCTCCATGGGAT...CACCCTGCATCTCTGCCAGGTGTACTTAGCACCTCCTCCCAGGCTGTCAAAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR CCA 90 bp | GGCCTGAAGCAGCTCAGAGAGAGGACTCTCTTTCCACCTTACCTCTCTGCTTTCCCATGCAGCAGGCCCTaGGCCCGCAGTTCCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GLKQLRERTLFPPYLSAFPCSRP*ARSSSL Trigger: GAGGGAGGAACTGCGGGCCCAGGGCCTGCTGCATGG...GAAAGCAGAGAGGTAAGGTGGAAAGAGAGTCCTCTCTCTGAGCTGCTTCAGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR TCA 90 bp | CCTAGAGACACACCAGAACCCCAAACCCTTCCCAGGAAGGTCCCACATGGCCAACCTCCTCAGGGATGCTaGAGCCTAGCAGCACACGCA | + |
|
Preference number: 4 (lower is better) Translates to: PRDTPEPQTLPRKVPHGQPPQGC*SLAAHA Trigger: TGCGTGTGCTGCTAGGCTTCAGCATCCCTGAGGAGG...TTGGCCATGTGGGACCTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGTCTCTAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR TCA 90 bp | ACACACCAGAACCCCAAACCCTTCCCAGGAAGGTCCCACATGGCCAACCCTCAACCTCCTCAGGGATGCTaGAGCCTAGCAGCACACGCA | + |
|
Preference number: 4 (lower is better) Translates to: THQNPKPFPGRSHMANPQPPQGC*SLAAHA Trigger: TGCGTGTGCTGCTAGGCTTCAGCATCCCTGAGGAGG...TTGAGGGTTGGCCATGTGGGACCTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR TCA 90 bp | GGCTTTGACAGCCTGGGAGGAGGTGCTAAGTACACCTGGCAGAGATGCAGGGTGACGGGCGCTGTGTCGTaGGTGTCTCGGATGCTATAC | + |
|
Preference number: 4 (lower is better) Translates to: GFDSLGGGAKYTWQRCRVTGAVS*VSRMLY Trigger: GTATAGCATCCGAGACACTCACGACACAGCGCCCGT...CACCCTGCATCTCTGCCAGGTGTACTTAGCACCTCCTCCCAGGCTGTCAAAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR TCA 90 bp | CCGGCGCTAACACTGTCATGGGCATACAGTCCTGGCTCTGTCCCAGGAGCTAAGACGGGCGCTGTGTCGTaGGTGTCTCGGATGCTATAC | + |
|
Preference number: 4 (lower is better) Translates to: PALTLSWAYSPGSVPGAKTGAVS*VSRMLY Trigger: GTATAGCATCCGAGACACTCACGACACAGCGCCCGT...CTTAGCTCCTGGGACAGAGCCAGGACTGTATGCCCATGACAGTGTTAGCGCCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR TCA 90 bp | CCCAGGGCTTTGACAGCCTGGGAGGAGGTGCTAAGTACACCTGGCAGAGATGCAACGGGCGCTGTGTCGTaGGTGTCTCGGATGCTATAC | + |
|
Preference number: 4 (lower is better) Translates to: PRALTAWEEVLSTPGRDATGAVS*VSRMLY Trigger: GTATAGCATCCGAGACACTCACGACACAGCGCCCGT...TGCATCTCTGCCAGGTGTACTTAGCACCTCCTCCCAGGCTGTCAAAGCCCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR GCA 90 bp | TGGCCAAGGTCAGTGAATAAATATGGGACAGGGGCAAGGGTAGGTAGCGGGGAGTCCGCGGCCACTCGGTaGTCACTAGCTGGTGTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: WPRSVNKYGTGARVGSGESAATR*SLAGVR Trigger: GCGAACACCAGCTAGTGAGCACCGAGTGGCCGCGGA...CTCCCCGCTACCTACCCTTGCCCCTGTCCCATATTTATTCACTGACCTTGGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR GCA 90 bp | GGCTTTGACAGCCTGGGAGGAGGTGCTAAGTACACCTGGCAGAGATGCAGGGTGTGGCCTCAGGCTGGCTaGTCCAGGCTCGAAGTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: GFDSLGGGAKYTWQRCRVWPQAG*SRLEVY Trigger: ATACACTTCGAGCCTGGAGCAGCCAGCCTGAGGCCA...CACCCTGCATCTCTGCCAGGTGTACTTAGCACCTCCTCCCAGGCTGTCAAAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR GCA 90 bp | ATCCCTCACCAGGACCAGAGTCACATGCCACATCGTCAGTCTGAAGCAGATGGCAGGTCTGCAGCACAGTaGGGTAGCCGCCTGAGACGG | + |
|
Preference number: 4 (lower is better) Translates to: IPHQDQSHMPHRQSEADGRSAAQ*GSRLRR Trigger: CCGTCTCAGGCGGCTACCGCACTGTGCTGCAGACCT...GCCATCTGCTTCAGACTGACGATGTGGCATGTGACTCTGGTCCTGGTGAGGGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR GCA 90 bp | ATCCCTCACCAGGACCAGAGTCACATGCCACATCGTCAGTCTGAAGCAGATGGCAGGCCATCCACGGGGTaGAAGACGGGGACCAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: IPHQDQSHMPHRQSEADGRPSTG*KTGTRV Trigger: CACTCTGGTCCCCGTCTTGCACCCCGTGGATGGCCT...GCCATCTGCTTCAGACTGACGATGTGGCATGTGACTCTGGTCCTGGTGAGGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR CCA 90 bp | GGAAGACAGAAGTCCCTTCAGAAGAACCCGTATCCTTATTCATCCTCACCAGGGGGCACGCGGCGAGGGTaGCCAGCGCCGACACCAACT | + |
|
Preference number: 4 (lower is better) Translates to: GRQKSLQKNPYPYSSSPGGTRRG*PAPTPT Trigger: AGTTGGTGTCGGCGCTGGCCACCCTCGCCGCGTGCC...CCCTGGTGAGGATGAATAAGGATACGGGTTCTTCTGAAGGGACTTCTGTCTTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR CCA 90 bp | CCGGCGCTAACACTGTCATGGGCATACAGTCCTGGCTCTGTCCCAGGAGCTAAGTGGAGCCCTTGGGGATaGGCAGCTTGCAGCTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PALTLSWAYSPGSVPGAKWSPWG*AACSSC Trigger: ACAAGAGCTGCAAGCTGCCCATCCCCAAGGGCTCCA...CTTAGCTCCTGGGACAGAGCCAGGACTGTATGCCCATGACAGTGTTAGCGCCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR CCA 90 bp | CCCAGGGCTTTGACAGCCTGGGAGGAGGTGCTAAGTACACCTGGCAGAGATGCACCTTCAGGAACAGCTTaGCCAAGTGCTTGCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PRALTAWEEVLSTPGRDAPSGTA*PSACPG Trigger: GCCTGGGCAAGCACTTGGCCAAGCTGTTCCTGAAGG...TGCATCTCTGCCAGGTGTACTTAGCACCTCCTCCCAGGCTGTCAAAGCCCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR TCA 90 bp | TCTCCTTCTCCATTGCTTTCTAGCTACAGCCTCCCCTGCAGCTTCTCCAGACCCCCTCCTCAGGGATGCTaGAGCCTAGCAGCACACGCA | + |
|
Preference number: 4 (lower is better) Translates to: SPSPLLSSYSLPCSFSRPPPQGC*SLAAHA Trigger: TGCGTGTGCTGCTAGGCTTCAGCATCCCTGAGGAGG...GGGTCTGGAGAAGCTGCAGGGGAGGCTGTAGCTAGAAAGCAATGGAGAAGGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR TCA 90 bp | AGAGACACACCAGAACCCCAAACCCTTCCCAGGAAGGTCCCACATGGCCAACCCACACATTCACGTCCTTaGACACGGGCGCTGTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: RDTPEPQTLPRKVPHGQPTHSRP*TRALCR Trigger: ACGACACAGCGCCCGTGTTCAAGGACGTGAATGTGT...GGGTTGGCCATGTGGGACCTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGTCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR GCA 90 bp | AGAGACACACCAGAACCCCAAACCCTTCCCAGGAAGGTCCCACATGGCCAACCCAGACCTTGCGCTTGTTaGGGTGGATGTCGCCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: RDTPEPQTLPRKVPHGQPRPCAC*GGCRQW Trigger: CCATTGGCGACATCCACCGCAACAAGCGCAAGGTCT...GGGTTGGCCATGTGGGACCTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGTCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR CCA 90 bp | AAACAGACAAAATTGCCTAGAGACACACCAGAACCCCAAACCCTTCCCAGGAAGGGCACGCGGCGAGGGTaGCCAGCGCCGACACCAACT | + |
|
Preference number: 4 (lower is better) Translates to: KQTKLPRDTPEPQTLPRKGTRRG*PAPTPT Trigger: AGTTGGTGTCGGCGCTGGCCACCCTCGCCGCGTGCC...CTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGTCTCTAGGCAATTTTGTCTGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR CCA 90 bp | GAGGTCTCTTTTCCTGTTACCTCTGAGACCCATCCGGGCAGACCATCTTTTCTTAGCTCTTGTCGCGGGTaGCAGCCCAGCGCAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: EVSFPVTSETHPGRPSFLSSCRG*QPSAAA Trigger: GGCAGCTGCGCTGGGCTGCCACCCGCGACAAGAGCT...AAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS-3UTR CCA 90 bp | CCTCAAGGCTGGTGGCAGCCGCTGCCCTGCCTCGGTTGGCTTAGGCGAGAATCTCTCTCAAGTGCCTCATaGCTGAAGATCTTGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PQGWWQPLPCLGWLRRESLSSAS*LKILEK Trigger: CTTCTCCAAGATCTTCAGCCATGAGGCACTTGAGAG...AGATTCTCGCCTAAGCCAACCGAGGCAGGGCAGCGGCTGCCACCAGCCTTGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR CCA 90 bp | GGCTTTGACAGCCTGGGAGGAGGTGCTAAGTACACCTGGCAGAGATGCAGGGTGTATACCTCAAAGAGGTaGCCCAGGTCCTCCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GFDSLGGGAKYTWQRCRVYTSKR*PRSSSG Trigger: CCCTGAGGAGGACCTGGGCCACCTCTTTGAGGTATA...CACCCTGCATCTCTGCCAGGTGTACTTAGCACCTCCTCCCAGGCTGTCAAAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR TCA 90 bp | ATCCCTCACCAGGACCAGAGTCACATGCCACATCGTCAGTCTGAAGCAGATGGCCCCTGTAGCAACCAGTaGCCAGTCTCTCCGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IPHQDQSHMPHRQSEADGPCSNQ*PVSPMS Trigger: GCTCATCGGAGAGACTGGTCACTGGTTGCTACAGGG...GCCATCTGCTTCAGACTGACGATGTGGCATGTGACTCTGGTCCTGGTGAGGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS-3UTR TCA 90 bp | CTGTCATGGGCATACAGTCCTGGCTCTGTCCCAGGAGCTAAGCTAGGTGGCAGTCCTCCTGATATACATTaGTGGCCTCAGGCTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSWAYSPGSVPGAKLGGSPPDIH*WPQAGC Trigger: GCAGCCAGCCTGAGGCCATCAATGTATATCAGGAGG...ACTGCCACCTAGCTTAGCTCCTGGGACAGAGCCAGGACTGTATGCCCATGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR TCA 90 bp | CCCAGGGCTTTGACAGCCTGGGAGGAGGTGCTAAGTACACCTGGCAGAGATGCAAGTCGCTGGGCCTCCTaGTATACATTGATGGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PRALTAWEEVLSTPGRDASRWAS*YTLMAS Trigger: TGAGGCCATCAATGTATATCAGGAGGCCCAGCGACT...TGCATCTCTGCCAGGTGTACTTAGCACCTCCTCCCAGGCTGTCAAAGCCCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR TCA 90 bp | CTGTCATGGGCATACAGTCCTGGCTCTGTCCCAGGAGCTAAGCTAGGTGGCAGTTTCTCTAGGCCCTTCTaGAGGATCTGCCGAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSWAYSPGSVPGAKLGGSFSRPF*RICRAW Trigger: CCAAGCTCGGCAGATCCTTCAGAAGGGCCTAGAGAA...ACTGCCACCTAGCTTAGCTCCTGGGACAGAGCCAGGACTGTATGCCCATGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR TCA 90 bp | ATCCCTCACCAGGACCAGAGTCACATGCCACATCGTCAGTCTGAAGCAGATGGCCCTTGCTGCTCTCAATaGGAATGTCCAGGGCGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: IPHQDQSHMPHRQSEADGPCCSQ*ECPGRP Trigger: CGGACGCCCTGGACATTCTCATTGAGAGCAGCAAGG...GCCATCTGCTTCAGACTGACGATGTGGCATGTGACTCTGGTCCTGGTGAGGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS-3UTR TCA 90 bp | TCTCCTTCTCCATTGCTTTCTAGCTACAGCCTCCCCTGCAGCTTCTCCAGACCCCCTTGCTGCTCTCAATaGGAATGTCCAGGGCGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SPSPLLSSYSLPCSFSRPPCCSQ*ECPGRP Trigger: CGGACGCCCTGGACATTCTCATTGAGAGCAGCAAGG...GGGTCTGGAGAAGCTGCAGGGGAGGCTGTAGCTAGAAAGCAATGGAGAAGGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS-3UTR TCA 90 bp | CAGACCAGTGAAACATCAAGAAATGTGGCTCATAGGATGTTCTGTGTGGCTGGTGGTAGCGCAGGCTGCTaGGCGTGTCCAGGCGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QTSETSRNVAHRMFCVAGGSAGC*ACPGAG Trigger: CCCTGCGCCTGGACACGCTCAGCAGCCTGCGCTACC...ACCAGCCACACAGAACATCCTATGAGCCACATTTCTTGATGTTTCACTGGTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS-3UTR TCA 90 bp | GAGGTCTCTTTTCCTGTTACCTCTGAGACCCATCCGGGCAGACCATCTTTTCTTAGACGGGGACCAGAGTaGTGCGAGGGAAGGTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: EVSFPVTSETHPGRPSFLRRGPE*CEGRSG Trigger: CCCGGACCTTCCCTCGCATCACTCTGGTCCCCGTCT...AAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS-3UTR GCA 90 bp | GCAGGGCTGTTAACCCTCTACCAAAGAACTGGGTTAGACCAGACACACTGTCTTAGCTGCCACAGCTGCTaGGACACCGCCAGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AGLLTLYQRTGLDQTHCLSCHSC*DTASSS Trigger: GCTGCTGCTGGCGGTGTCGCAGCAGCTGTGGCAGCT...AAGACAGTGTGTCTGGTCTAACCCAGTTCTTTGGTAGAGGGTTAACAGCCCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS-3UTR GCA 90 bp | CCCAGGGCTTTGACAGCCTGGGAGGAGGTGCTAAGTACACCTGGCAGAGATGCACCATCCTTCAGCTCCTaGATGGTCATCTCCTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PRALTAWEEVLSTPGRDAPSFSS*MVISLP Trigger: TGGCAAGGAGATGACCATGCAGGAGCTGAAGGATGG...TGCATCTCTGCCAGGTGTACTTAGCACCTCCTCCCAGGCTGTCAAAGCCCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS-3UTR GCA 90 bp | GGCCTGAAGCAGCTCAGAGAGAGGACTCTCTTTCCACCTTACCTCTCTGCTTTCAACAGCTTGGCCAAGTaGTTGCCCAGGCAGGTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: GLKQLRERTLFPPYLSAFNSLAK*LPRQVR Trigger: GCGGACCTGCCTGGGCAAGCACTTGGCCAAGCTGTT...GAAAGCAGAGAGGTAAGGTGGAAAGAGAGTCCTCTCTCTGAGCTGCTTCAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS-3UTR CCA 90 bp | CAGACCAGTGAAACATCAAGAAATGTGGCTCATAGGATGTTCTGTGTGGCTGGTGGCACGCGGCGAGGGTaGCCAGCGCCGACACCAACT | + |
|
Preference number: 4 (lower is better) Translates to: QTSETSRNVAHRMFCVAGGTRRG*PAPTPT Trigger: AGTTGGTGTCGGCGCTGGCCACCCTCGCCGCGTGCC...ACCAGCCACACAGAACATCCTATGAGCCACATTTCTTGATGTTTCACTGGTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS-3UTR CCA 90 bp | ATCCCTCACCAGGACCAGAGTCACATGCCACATCGTCAGTCTGAAGCAGATGGCTGGAGCCCTTGGGGATaGGCAGCTTGCAGCTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: IPHQDQSHMPHRQSEADGWSPWG*AACSSC Trigger: ACAAGAGCTGCAAGCTGCCCATCCCCAAGGGCTCCA...GCCATCTGCTTCAGACTGACGATGTGGCATGTGACTCTGGTCCTGGTGAGGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS-3UTR CCA 90 bp | CCGGCGCTAACACTGTCATGGGCATACAGTCCTGGCTCTGTCCCAGGAGCTAAGCAGCCCTTGGGGATCTaGAAACCATCCAGTTCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PALTLSWAYSPGSVPGAKQPLGI*KPSSSK Trigger: CTTCGAACTGGATGGTTTCCAGATCCCCAAGGGCTG...CTTAGCTCCTGGGACAGAGCCAGGACTGTATGCCCATGACAGTGTTAGCGCCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR CCA 90 bp | CCCAGGGCTTTGACAGCCTGGGAGGAGGTGCTAAGTACACCTGGCAGAGATGCACAGCCCTTGGGGATCTaGAAACCATCCAGTTCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PRALTAWEEVLSTPGRDAQPLGI*KPSSSK Trigger: CTTCGAACTGGATGGTTTCCAGATCCCCAAGGGCTG...TGCATCTCTGCCAGGTGTACTTAGCACCTCCTCCCAGGCTGTCAAAGCCCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR CCA 90 bp | ATCCCTCACCAGGACCAGAGTCACATGCCACATCGTCAGTCTGAAGCAGATGGCCCTTCAGGAACAGCTTaGCCAAGTGCTTGCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: IPHQDQSHMPHRQSEADGPSGTA*PSACPG Trigger: GCCTGGGCAAGCACTTGGCCAAGCTGTTCCTGAAGG...GCCATCTGCTTCAGACTGACGATGTGGCATGTGACTCTGGTCCTGGTGAGGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR TCA 90 bp | ATCCCTCACCAGGACCAGAGTCACATGCCACATCGTCAGTCTGAAGCAGATGGCCCTCCTGATATACATTaGTGGCCTCAGGCTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IPHQDQSHMPHRQSEADGPPDIH*WPQAGC Trigger: GCAGCCAGCCTGAGGCCATCAATGTATATCAGGAGG...GCCATCTGCTTCAGACTGACGATGTGGCATGTGACTCTGGTCCTGGTGAGGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR TCA 90 bp | CTGTCATGGGCATACAGTCCTGGCTCTGTCCCAGGAGCTAAGCTAGGTGGCAGTAGTCGCTGGGCCTCCTaGTATACATTGATGGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSWAYSPGSVPGAKLGGSSRWAS*YTLMAS Trigger: TGAGGCCATCAATGTATATCAGGAGGCCCAGCGACT...ACTGCCACCTAGCTTAGCTCCTGGGACAGAGCCAGGACTGTATGCCCATGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR TCA 90 bp | GCAGCATGCACCTTTTTCATAAACTTTGCTGAGTCTTTACACAGTCTGGCCTGTGGTAGCGCAGGCTGCTaGGCGTGTCCAGGCGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AACTFFINFAESLHSLACGSAGC*ACPGAG Trigger: CCCTGCGCCTGGACACGCTCAGCAGCCTGCGCTACC...ACAGGCCAGACTGTGTAAAGACTCAGCAAAGTTTATGAAAAAGGTGCATGCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR TCA 90 bp | GGCCTGAAGCAGCTCAGAGAGAGGACTCTCTTTCCACCTTACCTCTCTGCTTTCACGGGCGCTGTGTCGTaGGTGTCTCGGATGCTATAC | + |
|
Preference number: 4 (lower is better) Translates to: GLKQLRERTLFPPYLSAFTGAVS*VSRMLY Trigger: GTATAGCATCCGAGACACTCACGACACAGCGCCCGT...GAAAGCAGAGAGGTAAGGTGGAAAGAGAGTCCTCTCTCTGAGCTGCTTCAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR TCA 90 bp | ATCCCTCACCAGGACCAGAGTCACATGCCACATCGTCAGTCTGAAGCAGATGGCACACATTCACGTCCTTaGACACGGGCGCTGTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: IPHQDQSHMPHRQSEADGTHSRP*TRALCR Trigger: ACGACACAGCGCCCGTGTTCAAGGACGTGAATGTGT...GCCATCTGCTTCAGACTGACGATGTGGCATGTGACTCTGGTCCTGGTGAGGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR TCA 90 bp | AAACAGACAAAATTGCCTAGAGACACACCAGAACCCCAAACCCTTCCCAGGAAGAGACGGGGACCAGAGTaGTGCGAGGGAAGGTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: KQTKLPRDTPEPQTLPRKRRGPE*CEGRSG Trigger: CCCGGACCTTCCCTCGCATCACTCTGGTCCCCGTCT...CTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGTCTCTAGGCAATTTTGTCTGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR GCA 90 bp | GGAAGACAGAAGTCCCTTCAGAAGAACCCGTATCCTTATTCATCCTCACCAGGGTGGGGATGGGCAGCTTaGAGCTCTTGTCGCGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRQKSLQKNPYPYSSSPGWGWAA*SSCRGW Trigger: CCACCCGCGACAAGAGCTGCAAGCTGCCCATCCCCA...CCCTGGTGAGGATGAATAAGGATACGGGTTCTTCTGAAGGGACTTCTGTCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR GCA 90 bp | GGCTTTGACAGCCTGGGAGGAGGTGCTAAGTACACCTGGCAGAGATGCAGGGTGTCTTGGAGAAGACCTTaGGCTTGTTGCGGTGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: GFDSLGGGAKYTWQRCRVSWRRP*ACCGGC Trigger: ACATCCACCGCAACAAGCGCAAGGTCTTCTCCAAGA...CACCCTGCATCTCTGCCAGGTGTACTTAGCACCTCCTCCCAGGCTGTCAAAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR GCA 90 bp | AGAGACACACCAGAACCCCAAACCCTTCCCAGGAAGGTCCCACATGGCCAACCCGCATGGTCATCTCCTTaGCATGTTCCTTGCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RDTPEPQTLPRKVPHGQPAWSSP*HVPCCS Trigger: AGAGCAGCAAGGAACATGGCAAGGAGATGACCATGC...GGGTTGGCCATGTGGGACCTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR GCA 90 bp | GAGGTCTCTTTTCCTGTTACCTCTGAGACCCATCCGGGCAGACCATCTTTTCTTAGGTCTGCAGCACAGTaGGGTAGCCGCCTGAGACGG | + |
|
Preference number: 4 (lower is better) Translates to: EVSFPVTSETHPGRPSFLRSAAQ*GSRLRR Trigger: CCGTCTCAGGCGGCTACCGCACTGTGCTGCAGACCT...AAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR GCA 90 bp | GAGGTCTCTTTTCCTGTTACCTCTGAGACCCATCCGGGCAGACCATCTTTTCTTAGGCCATCCACGGGGTaGAAGACGGGGACCAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: EVSFPVTSETHPGRPSFLRPSTG*KTGTRV Trigger: CACTCTGGTCCCCGTCTTGCACCCCGTGGATGGCCT...AAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR GCA 90 bp | GGAAGACAGAAGTCCCTTCAGAAGAACCCGTATCCTTATTCATCCTCACCAGGGAGGCCATCCACGGGGTaGAAGACGGGGACCAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GRQKSLQKNPYPYSSSPGRPSTG*KTGTRV Trigger: CACTCTGGTCCCCGTCTTGCACCCCGTGGATGGCCT...CCCTGGTGAGGATGAATAAGGATACGGGTTCTTCTGAAGGGACTTCTGTCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| 3UTR CAA 72 bp | AATGGCTGCCCAGGATGCACACGCCAGCGCCTAACTTaGAAAGTGCTTCAATCTGCAAGCCCGTGGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NGCPGCTRQRLT*KVLQSASPWQE Trigger: TTCCTGCCACGGGCTTGCAGATTGAAGCACTTTCAAAGTTAGGCGCTGGCGTGTGCATCCTGGGCAGCCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205228.3 |
||
| CDS-3UTR TCA 90 bp | CTGTCATGGGCATACAGTCCTGGCTCTGTCCCAGGAGCTAAGCTAGGTGGCAGTCAAGTGCCTCATGGCTaGAGATCTTGGAGAAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: LSWAYSPGSVPGAKLGGSQVPHG*RSWRRP Trigger: AGGTCTTCTCCAAGATCTTCAGCCATGAGGCACTTG...ACTGCCACCTAGCTTAGCTCCTGGGACAGAGCCAGGACTGTATGCCCATGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR TCA 90 bp | GGCCTGAAGCAGCTCAGAGAGAGGACTCTCTTTCCACCTTACCTCTCTGCTTTCCCTCCTGATATACATTaGTGGCCTCAGGCTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GLKQLRERTLFPPYLSAFPPDIH*WPQAGC Trigger: GCAGCCAGCCTGAGGCCATCAATGTATATCAGGAGG...GAAAGCAGAGAGGTAAGGTGGAAAGAGAGTCCTCTCTCTGAGCTGCTTCAGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR TCA 90 bp | GCGATAGGTAATTTCCAATGTCCAAACTGGTTAGGCTGGTATGGGCCCCTCAAGCCTCCTCAGGGATGCTaGAGCCTAGCAGCACACGCA | + |
|
Preference number: 4 (lower is better) Translates to: AIGNFQCPNWLGWYGPLKPPQGC*SLAAHA Trigger: TGCGTGTGCTGCTAGGCTTCAGCATCCCTGAGGAGG...CTTGAGGGGCCCATACCAGCCTAACCAGTTTGGACATTGGAAATTACCTATCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR TCA 90 bp | CAGACCAGTGAAACATCAAGAAATGTGGCTCATAGGATGTTCTGTGTGGCTGGTAGACGGGGACCAGAGTaGTGCGAGGGAAGGTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: QTSETSRNVAHRMFCVAGRRGPE*CEGRSG Trigger: CCCGGACCTTCCCTCGCATCACTCTGGTCCCCGTCT...ACCAGCCACACAGAACATCCTATGAGCCACATTTCTTGATGTTTCACTGGTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR GCA 90 bp | ACACACCAGAACCCCAAACCCTTCCCAGGAAGGTCCCACATGGCCAACCCTCAATCTTGGAGAAGACCTTaGGCTTGTTGCGGTGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: THQNPKPFPGRSHMANPQSWRRP*ACCGGC Trigger: ACATCCACCGCAACAAGCGCAAGGTCTTCTCCAAGA...TTGAGGGTTGGCCATGTGGGACCTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR GCA 90 bp | GAGGTCTCTTTTCCTGTTACCTCTGAGACCCATCCGGGCAGACCATCTTTTCTTAACAGCTTGGCCAAGTaGTTGCCCAGGCAGGTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: EVSFPVTSETHPGRPSFLNSLAK*LPRQVR Trigger: GCGGACCTGCCTGGGCAAGCACTTGGCCAAGCTGTT...AAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR GCA 90 bp | GGAAGACAGAAGTCCCTTCAGAAGAACCCGTATCCTTATTCATCCTCACCAGGGGCTGGCCAGCTCCACTaGCAGCACCTTCAGGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: GRQKSLQKNPYPYSSSPGAGQLH*QHLQEQ Trigger: CTGTTCCTGAAGGTGCTGGCAGTGGAGCTGGCCAGC...CCCTGGTGAGGATGAATAAGGATACGGGTTCTTCTGAAGGGACTTCTGTCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR CCA 90 bp | GCAGCATGCACCTTTTTCATAAACTTTGCTGAGTCTTTACACAGTCTGGCCTGTAGCTCTTGTCGCGGGTaGCAGCCCAGCGCAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AACTFFINFAESLHSLACSSCRG*QPSAAA Trigger: GGCAGCTGCGCTGGGCTGCCACCCGCGACAAGAGCT...ACAGGCCAGACTGTGTAAAGACTCAGCAAAGTTTATGAAAAAGGTGCATGCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR CCA 90 bp | GAGGTCTCTTTTCCTGTTACCTCTGAGACCCATCCGGGCAGACCATCTTTTCTTATCCCATGGAGCCCTTaGGGATGGGCAGCTTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EVSFPVTSETHPGRPSFLIPWSP*GWAACS Trigger: GCTGCAAGCTGCCCATCCCCAAGGGCTCCATGGGAT...AAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR CCA 90 bp | GGCCTGAAGCAGCTCAGAGAGAGGACTCTCTTTCCACCTTACCTCTCTGCTTTCTCGGTGCTCACTAGCTaGTGTTCGCCCAGTAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: GLKQLRERTLFPPYLSAFSVLTS*CSPSRI Trigger: GATCCTACTGGGCGAACACCAGCTAGTGAGCACCGA...GAAAGCAGAGAGGTAAGGTGGAAAGAGAGTCCTCTCTCTGAGCTGCTTCAGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR CCA 90 bp | TGGCCAAGGTCAGTGAATAAATATGGGACAGGGGCAAGGGTAGGTAGCGGGGAGCAGCCCTTGGGGATCTaGAAACCATCCAGTTCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WPRSVNKYGTGARVGSGEQPLGI*KPSSSK Trigger: CTTCGAACTGGATGGTTTCCAGATCCCCAAGGGCTG...CTCCCCGCTACCTACCCTTGCCCCTGTCCCATATTTATTCACTGACCTTGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS-3UTR TCA 90 bp | AAACAGACAAAATTGCCTAGAGACACACCAGAACCCCAAACCCTTCCCAGGAAGGACCAGTCTCTCCGATaGGCGGGAATCCCATGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KQTKLPRDTPEPQTLPRKDQSLR*AGIPWS Trigger: GCTCCATGGGATTCCCGCTCATCGGAGAGACTGGTC...CTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGTCTCTAGGCAATTTTGTCTGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR TCA 90 bp | GGAAGACAGAAGTCCCTTCAGAAGAACCCGTATCCTTATTCATCCTCACCAGGGCCTTGCTGCTCTCAATaGGAATGTCCAGGGCGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: GRQKSLQKNPYPYSSSPGPCCSQ*ECPGRP Trigger: CGGACGCCCTGGACATTCTCATTGAGAGCAGCAAGG...CCCTGGTGAGGATGAATAAGGATACGGGTTCTTCTGAAGGGACTTCTGTCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR GCA 90 bp | TTCTGGAGAAAAAGAGCCACTACCTTAGTAACAGGCAAAAGCCATGGACGGAAAAGCTGCCACAGCTGCTaGGACACCGCCAGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FWRKRATTLVTGKSHGRKSCHSC*DTASSS Trigger: GCTGCTGCTGGCGGTGTCGCAGCAGCTGTGGCAGCT...TTTCCGTCCATGGCTTTTGCCTGTTACTAAGGTAGTGGCTCTTTTTCTCCAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR GCA 90 bp | CAGACCAGTGAAACATCAAGAAATGTGGCTCATAGGATGTTCTGTGTGGCTGGTTGGGGATGGGCAGCTTaGAGCTCTTGTCGCGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QTSETSRNVAHRMFCVAGWGWAA*SSCRGW Trigger: CCACCCGCGACAAGAGCTGCAAGCTGCCCATCCCCA...ACCAGCCACACAGAACATCCTATGAGCCACATTTCTTGATGTTTCACTGGTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS-3UTR GCA 90 bp | ACACACCAGAACCCCAAACCCTTCCCAGGAAGGTCCCACATGGCCAACCCTCAACAGGTAGCTCTCAAGTaGCTCATGGCTGAAGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: THQNPKPFPGRSHMANPQQVALK*LMAEDL Trigger: AAGATCTTCAGCCATGAGGCACTTGAGAGCTACCTG...TTGAGGGTTGGCCATGTGGGACCTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR GCA 90 bp | GGAAGACAGAAGTCCCTTCAGAAGAACCCGTATCCTTATTCATCCTCACCAGGGTGGCCTCAGGCTGGCTaGTCCAGGCTCGAAGTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: GRQKSLQKNPYPYSSSPGWPQAG*SRLEVY Trigger: ATACACTTCGAGCCTGGAGCAGCCAGCCTGAGGCCA...CCCTGGTGAGGATGAATAAGGATACGGGTTCTTCTGAAGGGACTTCTGTCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS-3UTR GCA 90 bp | GAGGTCTCTTTTCCTGTTACCTCTGAGACCCATCCGGGCAGACCATCTTTTCTTCGTCGTGGCGTAGGCTaGGAAGATCAACTCCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: EVSFPVTSETHPGRPSFLRRGVG*EDQLQG Trigger: ACCCTGGAGTTGATCTTCGCAGCCTACGCCACGACG...AAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS-3UTR GCA 90 bp | GCAGCATGCACCTTTTTCATAAACTTTGCTGAGTCTTTACACAGTCTGGCCTGTGCTTGGCCAAGTGCTTaGCCAGGCAGGTCCGCACGC | + |
|
Preference number: 4 (lower is better) Translates to: AACTFFINFAESLHSLACAWPSA*PGRSAR Trigger: GCGTGCGGACCTGCCTGGGCAAGCACTTGGCCAAGC...ACAGGCCAGACTGTGTAAAGACTCAGCAAAGTTTATGAAAAAGGTGCATGCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS-3UTR CCA 90 bp | TCTCTTTTCCTGTTACCTCTGAGACCCATCCGGGCAGACCATCTTTTCTTCCTCTTGATGGCCTCAGGCTaGCTGCTCCAGGCTCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLFLLPLRPIRADHLFFLLMASG*LLQARS Trigger: ACTTCGAGCCTGGAGCAGCCAGCCTGAGGCCATCAA...GAGGAAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS-3UTR CCA 90 bp | AGAGACACACCAGAACCCCAAACCCTTCCCAGGAAGGTCCCACATGGCCAACCCTTCTCCACAAACTGCTaGTATACCTCAAAGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RDTPEPQTLPRKVPHGQPFSTNC*YTSKRW Trigger: CCACCTCTTTGAGGTATACCAGCAGTTTGTGGAGAA...GGGTTGGCCATGTGGGACCTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS-3UTR CCA 90 bp | TGGCCAAGGTCAGTGAATAAATATGGGACAGGGGCAAGGGTAGGTAGCGGGGAGCCTTCAGCTCCTGCATaGTCATCTCCTTGCCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: WPRSVNKYGTGARVGSGEPSAPA*SSPCHV Trigger: AACATGGCAAGGAGATGACCATGCAGGAGCTGAAGG...CTCCCCGCTACCTACCCTTGCCCCTGTCCCATATTTATTCACTGACCTTGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS-3UTR CCA 90 bp | GAGGTCTCTTTTCCTGTTACCTCTGAGACCCATCCGGGCAGACCATCTTTTCTTCCTTCAGGAACAGCTTaGCCAAGTGCTTGCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EVSFPVTSETHPGRPSFLPSGTA*PSACPG Trigger: GCCTGGGCAAGCACTTGGCCAAGCTGTTCCTGAAGG...AAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS-3UTR CCA 90 bp | GCGATAGGTAATTTCCAATGTCCAAACTGGTTAGGCTGGTATGGGCCCCTCAAGCCTTCAGGAACAGCTTaGCCAAGTGCTTGCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AIGNFQCPNWLGWYGPLKPSGTA*PSACPG Trigger: GCCTGGGCAAGCACTTGGCCAAGCTGTTCCTGAAGG...CTTGAGGGGCCCATACCAGCCTAACCAGTTTGGACATTGGAAATTACCTATCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS-3UTR TCA 90 bp | AAACAGACAAAATTGCCTAGAGACACACCAGAACCCCAAACCCTTCCCAGGAAGCCCTGTAGCAACCAGTaGCCAGTCTCTCCGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KQTKLPRDTPEPQTLPRKPCSNQ*PVSPMS Trigger: GCTCATCGGAGAGACTGGTCACTGGTTGCTACAGGG...CTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGTCTCTAGGCAATTTTGTCTGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR TCA 90 bp | GGAAGACAGAAGTCCCTTCAGAAGAACCCGTATCCTTATTCATCCTCACCAGGGTTCTCTAGGCCCTTCTaGAGGATCTGCCGAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRQKSLQKNPYPYSSSPGFSRPF*RICRAW Trigger: CCAAGCTCGGCAGATCCTTCAGAAGGGCCTAGAGAA...CCCTGGTGAGGATGAATAAGGATACGGGTTCTTCTGAAGGGACTTCTGTCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR TCA 90 bp | GAGGTCTCTTTTCCTGTTACCTCTGAGACCCATCCGGGCAGACCATCTTTTCTTTTCTCTAGGCCCTTCTaGAGGATCTGCCGAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: EVSFPVTSETHPGRPSFLFSRPF*RICRAW Trigger: CCAAGCTCGGCAGATCCTTCAGAAGGGCCTAGAGAA...AAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR GCA 90 bp | TTCTGTGCCTCTGTTTTCTGGAGAAAAAGAGCCACTACCTTAGTAACAGGCAAAAGCTGCCACAGCTGCTaGGACACCGCCAGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FCASVFWRKRATTLVTGKSCHSC*DTASSS Trigger: GCTGCTGCTGGCGGTGTCGCAGCAGCTGTGGCAGCT...TTTGCCTGTTACTAAGGTAGTGGCTCTTTTTCTCCAGAAAACAGAGGCACAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR GCA 90 bp | GCGATAGGTAATTTCCAATGTCCAAACTGGTTAGGCTGGTATGGGCCCCTCAAGAGACCTTGCGCTTGTTaGGGTGGATGTCGCCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: AIGNFQCPNWLGWYGPLKRPCAC*GGCRQW Trigger: CCATTGGCGACATCCACCGCAACAAGCGCAAGGTCT...CTTGAGGGGCCCATACCAGCCTAACCAGTTTGGACATTGGAAATTACCTATCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR GCA 90 bp | AAACAGACAAAATTGCCTAGAGACACACCAGAACCCCAAACCCTTCCCAGGAAGTGGCCTCAGGCTGGCTaGTCCAGGCTCGAAGTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: KQTKLPRDTPEPQTLPRKWPQAG*SRLEVY Trigger: ATACACTTCGAGCCTGGAGCAGCCAGCCTGAGGCCA...CTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGTCTCTAGGCAATTTTGTCTGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR GCA 90 bp | CCGGCGCTAACACTGTCATGGGCATACAGTCCTGGCTCTGTCCCAGGAGCTAAGGGGTGTTTTAGCAGTTaGATGATCAAGGATGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PALTLSWAYSPGSVPGAKGCFSS*MIKDVL Trigger: AAGCACATCCTTGATCATGCAACTGCTAAAACACCC...CTTAGCTCCTGGGACAGAGCCAGGACTGTATGCCCATGACAGTGTTAGCGCCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR CCA 90 bp | TCTCTTTTCCTGTTACCTCTGAGACCCATCCGGGCAGACCATCTTTTCTTCCTCTCGGTGCTCACTAGCTaGTGTTCGCCCAGTAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: SLFLLPLRPIRADHLFFLSVLTS*CSPSRI Trigger: GATCCTACTGGGCGAACACCAGCTAGTGAGCACCGA...GAGGAAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR CCA 90 bp | GCGATAGGTAATTTCCAATGTCCAAACTGGTTAGGCTGGTATGGGCCCCTCAAGGGTGGATGTCGCCAATaGAATTGGCCACCGTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AIGNFQCPNWLGWYGPLKGGCRQ*NWPPCW Trigger: CCAACACGGTGGCCAATTCCATTGGCGACATCCACC...CTTGAGGGGCCCATACCAGCCTAACCAGTTTGGACATTGGAAATTACCTATCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR CCA 90 bp | TCTCCTTCTCCATTGCTTTCTAGCTACAGCCTCCCCTGCAGCTTCTCCAGACCCCTCTCAAGTGCCTCATaGCTGAAGATCTTGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SPSPLLSSYSLPCSFSRPLSSAS*LKILEK Trigger: CTTCTCCAAGATCTTCAGCCATGAGGCACTTGAGAG...GGGTCTGGAGAAGCTGCAGGGGAGGCTGTAGCTAGAAAGCAATGGAGAAGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR CCA 90 bp | TCTCTTTTCCTGTTACCTCTGAGACCCATCCGGGCAGACCATCTTTTCTTCCTCTATACCTCAAAGAGGTaGCCCAGGTCCTCCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLFLLPLRPIRADHLFFLYTSKR*PRSSSG Trigger: CCCTGAGGAGGACCTGGGCCACCTCTTTGAGGTATA...GAGGAAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR CCA 90 bp | GCGATAGGTAATTTCCAATGTCCAAACTGGTTAGGCTGGTATGGGCCCCTCAAGTATACCTCAAAGAGGTaGCCCAGGTCCTCCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AIGNFQCPNWLGWYGPLKYTSKR*PRSSSG Trigger: CCCTGAGGAGGACCTGGGCCACCTCTTTGAGGTATA...CTTGAGGGGCCCATACCAGCCTAACCAGTTTGGACATTGGAAATTACCTATCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR CCA 90 bp | GCAGGGCTGTTAACCCTCTACCAAAGAACTGGGTTAGACCAGACACACTGTCTTTATACCTCAAAGAGGTaGCCCAGGTCCTCCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AGLLTLYQRTGLDQTHCLYTSKR*PRSSSG Trigger: CCCTGAGGAGGACCTGGGCCACCTCTTTGAGGTATA...AAGACAGTGTGTCTGGTCTAACCCAGTTCTTTGGTAGAGGGTTAACAGCCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR TCA 90 bp | AAACAGACAAAATTGCCTAGAGACACACCAGAACCCCAAACCCTTCCCAGGAAGTTCTCTAGGCCCTTCTaGAGGATCTGCCGAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KQTKLPRDTPEPQTLPRKFSRPF*RICRAW Trigger: CCAAGCTCGGCAGATCCTTCAGAAGGGCCTAGAGAA...CTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGTCTCTAGGCAATTTTGTCTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR TCA 90 bp | AAACAGACAAAATTGCCTAGAGACACACCAGAACCCCAAACCCTTCCCAGGAAGACACATTCACGTCCTTaGACACGGGCGCTGTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: KQTKLPRDTPEPQTLPRKTHSRP*TRALCR Trigger: ACGACACAGCGCCCGTGTTCAAGGACGTGAATGTGT...CTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGTCTCTAGGCAATTTTGTCTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR GCA 90 bp | TTCTGTGCCTCTGTTTTCTGGAGAAAAAGAGCCACTACCTTAGTAACAGGCAAATCCGCGGCCACTCGGTaGTCACTAGCTGGTGTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: FCASVFWRKRATTLVTGKSAATR*SLAGVR Trigger: GCGAACACCAGCTAGTGAGCACCGAGTGGCCGCGGA...TTTGCCTGTTACTAAGGTAGTGGCTCTTTTTCTCCAGAAAACAGAGGCACAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR GCA 90 bp | ACACACCAGAACCCCAAACCCTTCCCAGGAAGGTCCCACATGGCCAACCCTCAAACATTCTCCACAAACTaGTGGTATACCTCAAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: THQNPKPFPGRSHMANPQTFSTN*WYTSKR Trigger: CCTCTTTGAGGTATACCAGCAGTTTGTGGAGAATGT...TTGAGGGTTGGCCATGTGGGACCTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR GCA 90 bp | GCGATAGGTAATTTCCAATGTCCAAACTGGTTAGGCTGGTATGGGCCCCTCAAGCCATCCTTCAGCTCCTaGATGGTCATCTCCTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AIGNFQCPNWLGWYGPLKPSFSS*MVISLP Trigger: TGGCAAGGAGATGACCATGCAGGAGCTGAAGGATGG...CTTGAGGGGCCCATACCAGCCTAACCAGTTTGGACATTGGAAATTACCTATCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR GCA 90 bp | CAGACCAGTGAAACATCAAGAAATGTGGCTCATAGGATGTTCTGTGTGGCTGGTCGTCGTGGCGTAGGCTaGGAAGATCAACTCCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QTSETSRNVAHRMFCVAGRRGVG*EDQLQG Trigger: ACCCTGGAGTTGATCTTCGCAGCCTACGCCACGACG...ACCAGCCACACAGAACATCCTATGAGCCACATTTCTTGATGTTTCACTGGTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR GCA 90 bp | ACACACCAGAACCCCAAACCCTTCCCAGGAAGGTCCCACATGGCCAACCCTCAAGGGTGTTTTAGCAGTTaGATGATCAAGGATGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: THQNPKPFPGRSHMANPQGCFSS*MIKDVL Trigger: AAGCACATCCTTGATCATGCAACTGCTAAAACACCC...TTGAGGGTTGGCCATGTGGGACCTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR GCA 90 bp | GCAGCATGCACCTTTTTCATAAACTTTGCTGAGTCTTTACACAGTCTGGCCTGTGCTGGCCAGCTCCACTaGCAGCACCTTCAGGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: AACTFFINFAESLHSLACAGQLH*QHLQEQ Trigger: CTGTTCCTGAAGGTGCTGGCAGTGGAGCTGGCCAGC...ACAGGCCAGACTGTGTAAAGACTCAGCAAAGTTTATGAAAAAGGTGCATGCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR CCA 90 bp | AAACAGACAAAATTGCCTAGAGACACACCAGAACCCCAAACCCTTCCCAGGAAGTCGGTGCTCACTAGCTaGTGTTCGCCCAGTAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: KQTKLPRDTPEPQTLPRKSVLTS*CSPSRI Trigger: GATCCTACTGGGCGAACACCAGCTAGTGAGCACCGA...CTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGTCTCTAGGCAATTTTGTCTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR CCA 90 bp | AAACAGACAAAATTGCCTAGAGACACACCAGAACCCCAAACCCTTCCCAGGAAGGGTGGATGTCGCCAATaGAATTGGCCACCGTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KQTKLPRDTPEPQTLPRKGGCRQ*NWPPCW Trigger: CCAACACGGTGGCCAATTCCATTGGCGACATCCACC...CTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGTCTCTAGGCAATTTTGTCTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR CCA 90 bp | CAGACCAGTGAAACATCAAGAAATGTGGCTCATAGGATGTTCTGTGTGGCTGGTTTGATGGCCTCAGGCTaGCTGCTCCAGGCTCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: QTSETSRNVAHRMFCVAGLMASG*LLQARS Trigger: ACTTCGAGCCTGGAGCAGCCAGCCTGAGGCCATCAA...ACCAGCCACACAGAACATCCTATGAGCCACATTTCTTGATGTTTCACTGGTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR CCA 90 bp | TCTCCTTCTCCATTGCTTTCTAGCTACAGCCTCCCCTGCAGCTTCTCCAGACCCTTCTCCACAAACTGCTaGTATACCTCAAAGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPSPLLSSYSLPCSFSRPFSTNC*YTSKRW Trigger: CCACCTCTTTGAGGTATACCAGCAGTTTGTGGAGAA...GGGTCTGGAGAAGCTGCAGGGGAGGCTGTAGCTAGAAAGCAATGGAGAAGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR TCA 90 bp | GCAGCATGCACCTTTTTCATAAACTTTGCTGAGTCTTTACACAGTCTGGCCTGTCCTTGCTGCTCTCAATaGGAATGTCCAGGGCGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: AACTFFINFAESLHSLACPCCSQ*ECPGRP Trigger: CGGACGCCCTGGACATTCTCATTGAGAGCAGCAAGG...ACAGGCCAGACTGTGTAAAGACTCAGCAAAGTTTATGAAAAAGGTGCATGCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR TCA 90 bp | CAGACCAGTGAAACATCAAGAAATGTGGCTCATAGGATGTTCTGTGTGGCTGGTACACATTCACGTCCTTaGACACGGGCGCTGTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: QTSETSRNVAHRMFCVAGTHSRP*TRALCR Trigger: ACGACACAGCGCCCGTGTTCAAGGACGTGAATGTGT...ACCAGCCACACAGAACATCCTATGAGCCACATTTCTTGATGTTTCACTGGTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR GCA 90 bp | CAGACCAGTGAAACATCAAGAAATGTGGCTCATAGGATGTTCTGTGTGGCTGGTAGACCTTGCGCTTGTTaGGGTGGATGTCGCCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: QTSETSRNVAHRMFCVAGRPCAC*GGCRQW Trigger: CCATTGGCGACATCCACCGCAACAAGCGCAAGGTCT...ACCAGCCACACAGAACATCCTATGAGCCACATTTCTTGATGTTTCACTGGTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR GCA 90 bp | TCTCTTTTCCTGTTACCTCTGAGACCCATCCGGGCAGACCATCTTTTCTTCCTCGCATGGTCATCTCCTTaGCATGTTCCTTGCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLFLLPLRPIRADHLFFLAWSSP*HVPCCS Trigger: AGAGCAGCAAGGAACATGGCAAGGAGATGACCATGC...GAGGAAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR GCA 90 bp | GGAAGACAGAAGTCCCTTCAGAAGAACCCGTATCCTTATTCATCCTCACCAGGGGCATGGTCATCTCCTTaGCATGTTCCTTGCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GRQKSLQKNPYPYSSSPGAWSSP*HVPCCS Trigger: AGAGCAGCAAGGAACATGGCAAGGAGATGACCATGC...CCCTGGTGAGGATGAATAAGGATACGGGTTCTTCTGAAGGGACTTCTGTCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR GCA 90 bp | AAACAGACAAAATTGCCTAGAGACACACCAGAACCCCAAACCCTTCCCAGGAAGCCATCCTTCAGCTCCTaGATGGTCATCTCCTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KQTKLPRDTPEPQTLPRKPSFSS*MVISLP Trigger: TGGCAAGGAGATGACCATGCAGGAGCTGAAGGATGG...CTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGTCTCTAGGCAATTTTGTCTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR GCA 90 bp | ATCCCTCACCAGGACCAGAGTCACATGCCACATCGTCAGTCTGAAGCAGATGGCGGGTGTTTTAGCAGTTaGATGATCAAGGATGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: IPHQDQSHMPHRQSEADGGCFSS*MIKDVL Trigger: AAGCACATCCTTGATCATGCAACTGCTAAAACACCC...GCCATCTGCTTCAGACTGACGATGTGGCATGTGACTCTGGTCCTGGTGAGGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR GCA 90 bp | TTCTGTGCCTCTGTTTTCTGGAGAAAAAGAGCCACTACCTTAGTAACAGGCAAAAACAGCTTGGCCAAGTaGTTGCCCAGGCAGGTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: FCASVFWRKRATTLVTGKNSLAK*LPRQVR Trigger: GCGGACCTGCCTGGGCAAGCACTTGGCCAAGCTGTT...TTTGCCTGTTACTAAGGTAGTGGCTCTTTTTCTCCAGAAAACAGAGGCACAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR CCA 90 bp | TTCTGTGCCTCTGTTTTCTGGAGAAAAAGAGCCACTACCTTAGTAACAGGCAAAATCCCATGGAGCCCTTaGGGATGGGCAGCTTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FCASVFWRKRATTLVTGKIPWSP*GWAACS Trigger: GCTGCAAGCTGCCCATCCCCAAGGGCTCCATGGGAT...TTTGCCTGTTACTAAGGTAGTGGCTCTTTTTCTCCAGAAAACAGAGGCACAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR CCA 90 bp | CAGACCAGTGAAACATCAAGAAATGTGGCTCATAGGATGTTCTGTGTGGCTGGTGGTGGATGTCGCCAATaGAATTGGCCACCGTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QTSETSRNVAHRMFCVAGGGCRQ*NWPPCW Trigger: CCAACACGGTGGCCAATTCCATTGGCGACATCCACC...ACCAGCCACACAGAACATCCTATGAGCCACATTTCTTGATGTTTCACTGGTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR CCA 90 bp | GCGATAGGTAATTTCCAATGTCCAAACTGGTTAGGCTGGTATGGGCCCCTCAAGCCTTCAGCTCCTGCATaGTCATCTCCTTGCCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: AIGNFQCPNWLGWYGPLKPSAPA*SSPCHV Trigger: AACATGGCAAGGAGATGACCATGCAGGAGCTGAAGG...CTTGAGGGGCCCATACCAGCCTAACCAGTTTGGACATTGGAAATTACCTATCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR CCA 90 bp | GGAAGACAGAAGTCCCTTCAGAAGAACCCGTATCCTTATTCATCCTCACCAGGGCCTTCAGCTCCTGCATaGTCATCTCCTTGCCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: GRQKSLQKNPYPYSSSPGPSAPA*SSPCHV Trigger: AACATGGCAAGGAGATGACCATGCAGGAGCTGAAGG...CCCTGGTGAGGATGAATAAGGATACGGGTTCTTCTGAAGGGACTTCTGTCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR CCA 90 bp | TGGCCAAGGTCAGTGAATAAATATGGGACAGGGGCAAGGGTAGGTAGCGGGGAGGAATCTCATTCTGGTTaGAGTCCAGACCAAAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: WPRSVNKYGTGARVGSGEESHSG*SPDQRT Trigger: AGTTCTTTGGTCTGGACTCCAACCAGAATGAGATTC...CTCCCCGCTACCTACCCTTGCCCCTGTCCCATATTTATTCACTGACCTTGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR CCA 90 bp | TCTCCTTCTCCATTGCTTTCTAGCTACAGCCTCCCCTGCAGCTTCTCCAGACCCGAATCTCATTCTGGTTaGAGTCCAGACCAAAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: SPSPLLSSYSLPCSFSRPESHSG*SPDQRT Trigger: AGTTCTTTGGTCTGGACTCCAACCAGAATGAGATTC...GGGTCTGGAGAAGCTGCAGGGGAGGCTGTAGCTAGAAAGCAATGGAGAAGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR CCA 90 bp | TTCTGTGCCTCTGTTTTCTGGAGAAAAAGAGCCACTACCTTAGTAACAGGCAAATGGAGCCCTTGGGGATaGGCAGCTTGCAGCTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FCASVFWRKRATTLVTGKWSPWG*AACSSC Trigger: ACAAGAGCTGCAAGCTGCCCATCCCCAAGGGCTCCA...TTTGCCTGTTACTAAGGTAGTGGCTCTTTTTCTCCAGAAAACAGAGGCACAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR CCA 90 bp | GCAGGGCTGTTAACCCTCTACCAAAGAACTGGGTTAGACCAGACACACTGTCTTGGCAGAATCTCATTCTaGTTGGAGTCCAGACCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: AGLLTLYQRTGLDQTHCLGRISF*LESRPK Trigger: CTTTGGTCTGGACTCCAACCAGAATGAGATTCTGCC...AAGACAGTGTGTCTGGTCTAACCCAGTTCTTTGGTAGAGGGTTAACAGCCCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR GCA 90 bp | AAACAGACAAAATTGCCTAGAGACACACCAGAACCCCAAACCCTTCCCAGGAAGCAGGTAGCTCTCAAGTaGCTCATGGCTGAAGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: KQTKLPRDTPEPQTLPRKQVALK*LMAEDL Trigger: AAGATCTTCAGCCATGAGGCACTTGAGAGCTACCTG...CTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGTCTCTAGGCAATTTTGTCTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR CCA 90 bp | GAGGTCTCTTTTCCTGTTACCTCTGAGACCCATCCGGGCAGACCATCTTTTCTTTTCTCCACAAACTGCTaGTATACCTCAAAGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EVSFPVTSETHPGRPSFLFSTNC*YTSKRW Trigger: CCACCTCTTTGAGGTATACCAGCAGTTTGTGGAGAA...AAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGACCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR CCA 90 bp | AAACAGACAAAATTGCCTAGAGACACACCAGAACCCCAAACCCTTCCCAGGAAGGGCAGAATCTCATTCTaGTTGGAGTCCAGACCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KQTKLPRDTPEPQTLPRKGRISF*LESRPK Trigger: CTTTGGTCTGGACTCCAACCAGAATGAGATTCTGCC...CTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGTCTCTAGGCAATTTTGTCTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR GCA 90 bp | CAGACCAGTGAAACATCAAGAAATGTGGCTCATAGGATGTTCTGTGTGGCTGGTCAGGTAGCTCTCAAGTaGCTCATGGCTGAAGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: QTSETSRNVAHRMFCVAGQVALK*LMAEDL Trigger: AAGATCTTCAGCCATGAGGCACTTGAGAGCTACCTG...ACCAGCCACACAGAACATCCTATGAGCCACATTTCTTGATGTTTCACTGGTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR GCA 90 bp | TCTCTTTTCCTGTTACCTCTGAGACCCATCCGGGCAGACCATCTTTTCTTCCTCACATTCTCCACAAACTaGTGGTATACCTCAAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLFLLPLRPIRADHLFFLTFSTN*WYTSKR Trigger: CCTCTTTGAGGTATACCAGCAGTTTGTGGAGAATGT...GAGGAAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR CCA 90 bp | GCAGCATGCACCTTTTTCATAAACTTTGCTGAGTCTTTACACAGTCTGGCCTGTTTGCGCTTGTTGCGGTaGATGTCGCCAATGGAATTG | + |
|
Preference number: 4 (lower is better) Translates to: AACTFFINFAESLHSLACLRLLR*MSPMEL Trigger: CAATTCCATTGGCGACATCCACCGCAACAAGCGCAA...ACAGGCCAGACTGTGTAAAGACTCAGCAAAGTTTATGAAAAAGGTGCATGCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR CCA 90 bp | TCTCTTTTCCTGTTACCTCTGAGACCCATCCGGGCAGACCATCTTTTCTTCCTCGAATCTCATTCTGGTTaGAGTCCAGACCAAAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: SLFLLPLRPIRADHLFFLESHSG*SPDQRT Trigger: AGTTCTTTGGTCTGGACTCCAACCAGAATGAGATTC...GAGGAAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR CCA 90 bp | TTCTGTGCCTCTGTTTTCTGGAGAAAAAGAGCCACTACCTTAGTAACAGGCAAATTGCGCTTGTTGCGGTaGATGTCGCCAATGGAATTG | + |
|
Preference number: 4 (lower is better) Translates to: FCASVFWRKRATTLVTGKLRLLR*MSPMEL Trigger: CAATTCCATTGGCGACATCCACCGCAACAAGCGCAA...TTTGCCTGTTACTAAGGTAGTGGCTCTTTTTCTCCAGAAAACAGAGGCACAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR CCA 90 bp | AAACAGACAAAATTGCCTAGAGACACACCAGAACCCCAAACCCTTCCCAGGAAGGAATCTCATTCTGGTTaGAGTCCAGACCAAAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: KQTKLPRDTPEPQTLPRKESHSG*SPDQRT Trigger: AGTTCTTTGGTCTGGACTCCAACCAGAATGAGATTC...CTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGTCTCTAGGCAATTTTGTCTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR CCA 90 bp | GCAGCATGCACCTTTTTCATAAACTTTGCTGAGTCTTTACACAGTCTGGCCTGTGGCAGAATCTCATTCTaGTTGGAGTCCAGACCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: AACTFFINFAESLHSLACGRISF*LESRPK Trigger: CTTTGGTCTGGACTCCAACCAGAATGAGATTCTGCC...ACAGGCCAGACTGTGTAAAGACTCAGCAAAGTTTATGAAAAAGGTGCATGCTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR GCA 90 bp | CAGACCAGTGAAACATCAAGAAATGTGGCTCATAGGATGTTCTGTGTGGCTGGTACATTCTCCACAAACTaGTGGTATACCTCAAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QTSETSRNVAHRMFCVAGTFSTN*WYTSKR Trigger: CCTCTTTGAGGTATACCAGCAGTTTGTGGAGAATGT...ACCAGCCACACAGAACATCCTATGAGCCACATTTCTTGATGTTTCACTGGTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS-3UTR CCA 90 bp | TTCTGTGCCTCTGTTTTCTGGAGAAAAAGAGCCACTACCTTAGTAACAGGCAAACTCTCAAGTGCCTCATaGCTGAAGATCTTGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FCASVFWRKRATTLVTGKLSSAS*LKILEK Trigger: CTTCTCCAAGATCTTCAGCCATGAGGCACTTGAGAG...TTTGCCTGTTACTAAGGTAGTGGCTCTTTTTCTCCAGAAAACAGAGGCACAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS-3UTR CCA 90 bp | GCAGCATGCACCTTTTTCATAAACTTTGCTGAGTCTTTACACAGTCTGGCCTGTTTCTCCACAAACTGCTaGTATACCTCAAAGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AACTFFINFAESLHSLACFSTNC*YTSKRW Trigger: CCACCTCTTTGAGGTATACCAGCAGTTTGTGGAGAA...ACAGGCCAGACTGTGTAAAGACTCAGCAAAGTTTATGAAAAAGGTGCATGCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS-3UTR GCA 90 bp | TTCTGGAGAAAAAGAGCCACTACCTTAGTAACAGGCAAAAGCCATGGACGGAAAACATTCTCCACAAACTaGTGGTATACCTCAAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FWRKRATTLVTGKSHGRKTFSTN*WYTSKR Trigger: CCTCTTTGAGGTATACCAGCAGTTTGTGGAGAATGT...TTTCCGTCCATGGCTTTTGCCTGTTACTAAGGTAGTGGCTCTTTTTCTCCAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| 3UTR CAA 72 bp | CCACAGTTTATTACGGAAGCCAATAAAAGAGCCACATaGAGTATTTCACAAAATGCATGGCATTCATTGTTG | + |
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Preference number: 4 (lower is better) Translates to: PQFITEANKRAT*SISQNAWHSLL Trigger: CAACAATGAATGCCATGCATTTTGTGAAATACTCAATGTGGCTCTTTTATTGGCTTCCGTAATAAACTGTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205228.3 |
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| CDS GCA 90 bp | CAGCTCTTGTCGCGGGTGGCAGCCCAGCGCAGCTGCCACAGCTGCTaGGACACCGCCAGCAGCAGCGTCACGGACACCAGGCACGCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: QLLSRVAAQRSCHSC*DTASSSVTDTRHAA Trigger: CGCCGCGTGCCTGGTGTCCGTGACGCTGCTGCTGGCGGTGTCGCAGCAGCTGTGGCAGCTGCGCTGGGCTGCCACCCGCGACAAGAGCTG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204109.2 ENSMUST00000204146.3 |
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| CDS GCA 90 bp | TTGCAGCTCTTGTCGCGGGTGGCAGCCCAGCGCAGCTGCCACAGCTaGTGCGACACCGCCAGCAGCAGCGTCACGGACACCAGGCACGCG | + |
|
Preference number: 5 (lower is better) Translates to: LQLLSRVAAQRSCHS*CDTASSSVTDTRHA Trigger: CGCGTGCCTGGTGTCCGTGACGCTGCTGCTGGCGGTGTCGCAGCAGCTGTGGCAGCTGCGCTGGGCTGCCACCCGCGACAAGAGCTGCAA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204109.2 ENSMUST00000204146.3 |
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| CDS GCA 90 bp | ATGGGCAGCTTGCAGCTCTTGTCGCGGGTGGCAGCCCAGCGCAGCTaGCACAGCTGCTGCGACACCGCCAGCAGCAGCGTCACGGACACC | + |
|
Preference number: 5 (lower is better) Translates to: MGSLQLLSRVAAQRS*HSCCDTASSSVTDT Trigger: GGTGTCCGTGACGCTGCTGCTGGCGGTGTCGCAGCAGCTGTGGCAGCTGCGCTGGGCTGCCACCCGCGACAAGAGCTGCAAGCTGCCCAT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204109.2 ENSMUST00000204146.3 |
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| CDS CCA 90 bp | CCATGGAGCCCTTGGGGATGGGCAGCTTGCAGCTCTTGTCGCGGGTaGCAGCCCAGCGCAGCTGCCACAGCTGCTGCGACACCGCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PWSPWGWAACSSCRG*QPSAAATAAATPPA Trigger: TGCTGGCGGTGTCGCAGCAGCTGTGGCAGCTGCGCTGGGCTGCCACCCGCGACAAGAGCTGCAAGCTGCCCATCCCCAAGGGCTCCATGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204109.2 ENSMUST00000204146.3 |
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| CDS-3UTR CAA 90 bp | CCTCAAGGCTGGTGGCAGCCGCTGCCCTGCCTCGGTTGGCTTAGGCGAGAATCTGGCAGCTTGCAGCTCTaGTCGCGGGTGGCAGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PQGWWQPLPCLGWLRRESGSLQL*SRVAAQ Trigger: CTGGGCTGCCACCCGCGACAAGAGCTGCAAGCTGCC...AGATTCTCGCCTAAGCCAACCGAGGCAGGGCAGCGGCTGCCACCAGCCTTGAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS GCA 90 bp | GGTCCGGGTGGCCAGCTCGAAGCGGCTAGTGCTGGCCAGCTCCACTaGCAGCACCTTCAGGAACAGCTTGGCCAAGTGCTTGCCCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GPGGQLEAASAGQLH*QHLQEQLGQVLAQA Trigger: TGCCTGGGCAAGCACTTGGCCAAGCTGTTCCTGAAGGTGCTGGCAGTGGAGCTGGCCAGCACTAGCCGCTTCGAGCTGGCCACCCGGACC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204109.2 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS CCA 90 bp | CCCAGCAGTACGCGTGCGCTCCGCGGCCACTCGGTGCTCACTAGCTaGTGTTCGCCCAGTAGGATCTTGCGCACATTCTCCGCACCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: PSSTRALRGHSVLTS*CSPSRILRTFSAPV Trigger: GACCGGTGCGGAGAATGTGCGCAAGATCCTACTGGGCGAACACCAGCTAGTGAGCACCGAGTGGCCGCGGAGCGCACGCGTACTGCTGGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS GCA 90 bp | GCGGCCACTCGGTGCTCACTAGCTGGTGTTCGCCCAGTAGGATCTTaGGCACATTCTCCGCACCGGTCACACGAATCAGCGGCCGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: AATRCSLAGVRPVGS*AHSPHRSHESAAAP Trigger: TGGGGCGGCCGCTGATTCGTGTGACCGGTGCGGAGAATGTGCGCAAGATCCTACTGGGCGAACACCAGCTAGTGAGCACCGAGTGGCCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS CCA 90 bp | TGCGCTTGTTGCGGTGGATGTCGCCAATGGAATTGGCCACCGTGTTaGGACCCAGCAGTACGCGTGCGCTCCGCGGCCACTCGGTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: CACCGGCRQWNWPPC*DPAVRVRSAATRCS Trigger: TGAGCACCGAGTGGCCGCGGAGCGCACGCGTACTGCTGGGTCCCAACACGGTGGCCAATTCCATTGGCGACATCCACCGCAACAAGCGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS GCA 90 bp | CCGTGTTGGGACCCAGCAGTACGCGTGCGCTCCGCGGCCACTCGGTaGTCACTAGCTGGTGTTCGCCCAGTAGGATCTTGCGCACATTCT | + |
|
Preference number: 5 (lower is better) Translates to: PCWDPAVRVRSAATR*SLAGVRPVGSCAHS Trigger: AGAATGTGCGCAAGATCCTACTGGGCGAACACCAGCTAGTGAGCACCGAGTGGCCGCGGAGCGCACGCGTACTGCTGGGTCCCAACACGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS GCA 90 bp | CCAGCTCCACTGCCAGCACCTTCAGGAACAGCTTGGCCAAGTGCTTaGCCAGGCAGGTCCGCACGCCACCGCCAAACGGGAGGTAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: PAPLPAPSGTAWPSA*PGRSARHRQTGGNG Trigger: TCCATTACCTCCCGTTTGGCGGTGGCGTGCGGACCTGCCTGGGCAAGCACTTGGCCAAGCTGTTCCTGAAGGTGCTGGCAGTGGAGCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204109.2 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS CCA 90 bp | TGGAGAAGACCTTGCGCTTGTTGCGGTGGATGTCGCCAATGGAATTaGCCACCGTGTTGGGACCCAGCAGTACGCGTGCGCTCCGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: WRRPCACCGGCRQWN*PPCWDPAVRVRSAA Trigger: GGCCGCGGAGCGCACGCGTACTGCTGGGTCCCAACACGGTGGCCAATTCCATTGGCGACATCCACCGCAACAAGCGCAAGGTCTTCTCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS-3UTR CAA 90 bp | AGAGACACACCAGAACCCCAAACCCTTCCCAGGAAGGTCCCACATGGCCAACCCGGCAGCTTGCAGCTCTaGTCGCGGGTGGCAGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RDTPEPQTLPRKVPHGQPGSLQL*SRVAAQ Trigger: CTGGGCTGCCACCCGCGACAAGAGCTGCAAGCTGCC...GGGTTGGCCATGTGGGACCTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGTCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS TCA 90 bp | CCGCACCGGTCACACGAATCAGCGGCCGCCCCAGTAAGTGTGTCTTaGAAACGTTGCCATACTTCTCCCGGCGCGACGACTGGAAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: PHRSHESAAAPVSVS*KRCHTSPGATTGSR Trigger: CCGGCTTCCAGTCGTCGCGCCGGGAGAAGTATGGCAACGTTTTCAAGACACACTTACTGGGGCGGCCGCTGATTCGTGTGACCGGTGCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS-3UTR CAA 90 bp | CCTCAAGGCTGGTGGCAGCCGCTGCCCTGCCTCGGTTGGCTTAGGCGAGAATCTATGTCGCCAATGGAATaGGCCACCGTGTTGGGACCC | + |
|
Preference number: 5 (lower is better) Translates to: PQGWWQPLPCLGWLRRESMSPME*ATVLGP Trigger: GGGTCCCAACACGGTGGCCAATTCCATTGGCGACAT...AGATTCTCGCCTAAGCCAACCGAGGCAGGGCAGCGGCTGCCACCAGCCTTGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS TCA 90 bp | ACTGGAAGCCGGAACCCTGTAGCAACCAGTGACCAGTCTCTCCGATaGGCGGGAATCCCATGGAGCCCTTGGGGATGGGCAGCTTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TGSRNPVATSDQSLR*AGIPWSPWGWAACS Trigger: GCTGCAAGCTGCCCATCCCCAAGGGCTCCATGGGATTCCCGCTCATCGGAGAGACTGGTCACTGGTTGCTACAGGGTTCCGGCTTCCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS GCA 90 bp | TTGGAGTCCAGACCAAAGAACTTGACACTGAGGCCATCCACGGGGTaGAAGACGGGGACCAGAGTGATGCGAGGGAAGGTCCGGGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LESRPKNLTLRPSTG*KTGTRVMRGKVRVA Trigger: GGCCACCCGGACCTTCCCTCGCATCACTCTGGTCCCCGTCTTGCACCCCGTGGATGGCCTCAGTGTCAAGTTCTTTGGTCTGGACTCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204109.2 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS-3UTR CAA 90 bp | CCTCAAGGCTGGTGGCAGCCGCTGCCCTGCCTCGGTTGGCTTAGGCGAGAATCTAAGACCTTGCGCTTGTaGCGGTGGATGTCGCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: PQGWWQPLPCLGWLRRESKTLRL*RWMSPM Trigger: CATTGGCGACATCCACCGCAACAAGCGCAAGGTCTT...AGATTCTCGCCTAAGCCAACCGAGGCAGGGCAGCGGCTGCCACCAGCCTTGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS-3UTR CAA 90 bp | CCTCAAGGCTGGTGGCAGCCGCTGCCCTGCCTCGGTTGGCTTAGGCGAGAATCTATGACACTCCAGCCCTaGGGGATCTGGAAACCATCC | + |
|
Preference number: 5 (lower is better) Translates to: PQGWWQPLPCLGWLRRESMTLQP*GIWKPS Trigger: GGATGGTTTCCAGATCCCCAAGGGCTGGAGTGTCAT...AGATTCTCGCCTAAGCCAACCGAGGCAGGGCAGCGGCTGCCACCAGCCTTGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS-3UTR CAA 90 bp | CCCAGGGCTTTGACAGCCTGGGAGGAGGTGCTAAGTACACCTGGCAGAGATGCAAATCCCATGGAGCCCTaGGGGATGGGCAGCTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PRALTAWEEVLSTPGRDANPMEP*GMGSLQ Trigger: CTGCAAGCTGCCCATCCCCAAGGGCTCCATGGGATT...TGCATCTCTGCCAGGTGTACTTAGCACCTCCTCCCAGGCTGTCAAAGCCCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS-3UTR CAA 90 bp | CCGGCGCTAACACTGTCATGGGCATACAGTCCTGGCTCTGTCCCAGGAGCTAAGAATCCCATGGAGCCCTaGGGGATGGGCAGCTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PALTLSWAYSPGSVPGAKNPMEP*GMGSLQ Trigger: CTGCAAGCTGCCCATCCCCAAGGGCTCCATGGGATT...CTTAGCTCCTGGGACAGAGCCAGGACTGTATGCCCATGACAGTGTTAGCGCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS-3UTR CAA 90 bp | CCTCAAGGCTGGTGGCAGCCGCTGCCCTGCCTCGGTTGGCTTAGGCGAGAATCTATCCTGGATCACCAGTaGGATCTTGGGCAGGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PQGWWQPLPCLGWLRRESILDHQ*DLGQVA Trigger: AGCTACCTGCCCAAGATCCAACTGGTGATCCAGGAT...AGATTCTCGCCTAAGCCAACCGAGGCAGGGCAGCGGCTGCCACCAGCCTTGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS-3UTR CAA 90 bp | CCTCAAGGCTGGTGGCAGCCGCTGCCCTGCCTCGGTTGGCTTAGGCGAGAATCTTCCAGACCAAAGAACTaGACACTGAGGCCATCCACG | + |
|
Preference number: 5 (lower is better) Translates to: PQGWWQPLPCLGWLRRESSRPKN*TLRPST Trigger: CGTGGATGGCCTCAGTGTCAAGTTCTTTGGTCTGGA...AGATTCTCGCCTAAGCCAACCGAGGCAGGGCAGCGGCTGCCACCAGCCTTGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS TCA 90 bp | AGCAGCACACGCACGGCCATTCGGAAGGTAAGTCGCTGGGCCTCCTaGTATACATTGATGGCCTCAGGCTGGCTGCTCCAGGCTCGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: SSTRTAIRKVSRWAS*YTLMASGWLLQARS Trigger: ACTTCGAGCCTGGAGCAGCCAGCCTGAGGCCATCAATGTATATCAGGAGGCCCAGCGACTTACCTTCCGAATGGCCGTGCGTGTGCTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204109.2 ENSMUST00000204146.3 |
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| CDS CCA 90 bp | AGATCTTGGAGAAGACCTTGCGCTTGTTGCGGTGGATGTCGCCAATaGAATTGGCCACCGTGTTGGGACCCAGCAGTACGCGTGCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RSWRRPCACCGGCRQ*NWPPCWDPAVRVRS Trigger: GGAGCGCACGCGTACTGCTGGGTCCCAACACGGTGGCCAATTCCATTGGCGACATCCACCGCAACAAGCGCAAGGTCTTCTCCAAGATCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS-3UTR CAA 90 bp | ATCCCTCACCAGGACCAGAGTCACATGCCACATCGTCAGTCTGAAGCAGATGGCTTGGGGATGGGCAGCTaGCAGCTCTTGTCGCGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: IPHQDQSHMPHRQSEADGLGMGS*QLLSRV Trigger: CACCCGCGACAAGAGCTGCAAGCTGCCCATCCCCAA...GCCATCTGCTTCAGACTGACGATGTGGCATGTGACTCTGGTCCTGGTGAGGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS TCA 90 bp | CCTCCCTCAGCTTCTCCAGCACAGCAGGGTGTTTTAGCAGTTGCATaGTCAAGGATGTGCTTGCACTGGCCGTCGTGGCGTAGGCTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: PPSASPAQQGVLAVA*SRMCLHWPSWRRLR Trigger: TCGCAGCCTACGCCACGACGGCCAGTGCAAGCACATCCTTGATCATGCAACTGCTAAAACACCCTGCTGTGCTGGAGAAGCTGAGGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204109.2 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS TCA 90 bp | AGATCTTGGAGAAGACCTGTAGCAACCAGTGACCAGTCTCTCCGATaGGCGGGAATCCCATGGAGCCCTTGGGGATGGGCAGCTTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RSWRRPVATSDQSLR*AGIPWSPWGWAACS Trigger: GCTGCAAGCTGCCCATCCCCAAGGGCTCCATGGGATTCCCGCTCATCGGAGAGACTGGTCACTGGTTGCTACAGGTCTTCTCCAAGATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204109.2 |
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| CDS-3UTR CAA 90 bp | TCTCCTTCTCCATTGCTTTCTAGCTACAGCCTCCCCTGCAGCTTCTCCAGACCCAATCCCATGGAGCCCTaGGGGATGGGCAGCTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SPSPLLSSYSLPCSFSRPNPMEP*GMGSLQ Trigger: CTGCAAGCTGCCCATCCCCAAGGGCTCCATGGGATT...GGGTCTGGAGAAGCTGCAGGGGAGGCTGTAGCTAGAAAGCAATGGAGAAGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS-3UTR CAA 90 bp | ACACACCAGAACCCCAAACCCTTCCCAGGAAGGTCCCACATGGCCAACCCTCAAATGTCGCCAATGGAATaGGCCACCGTGTTGGGACCC | + |
|
Preference number: 5 (lower is better) Translates to: THQNPKPFPGRSHMANPQMSPME*ATVLGP Trigger: GGGTCCCAACACGGTGGCCAATTCCATTGGCGACAT...TTGAGGGTTGGCCATGTGGGACCTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS-3UTR CAA 90 bp | CCTAGAGACACACCAGAACCCCAAACCCTTCCCAGGAAGGTCCCACATGGCCAAGAGAAGACCTTGCGCTaGTTGCGGTGGATGTCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PRDTPEPQTLPRKVPHGQEKTLR*LRWMSP Trigger: TGGCGACATCCACCGCAACAAGCGCAAGGTCTTCTC...TTGGCCATGTGGGACCTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGTCTCTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS-3UTR CAA 90 bp | CCCAGGGCTTTGACAGCCTGGGAGGAGGTGCTAAGTACACCTGGCAGAGATGCAATGACACTCCAGCCCTaGGGGATCTGGAAACCATCC | + |
|
Preference number: 5 (lower is better) Translates to: PRALTAWEEVLSTPGRDAMTLQP*GIWKPS Trigger: GGATGGTTTCCAGATCCCCAAGGGCTGGAGTGTCAT...TGCATCTCTGCCAGGTGTACTTAGCACCTCCTCCCAGGCTGTCAAAGCCCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS-3UTR CAA 90 bp | GGCTTTGACAGCCTGGGAGGAGGTGCTAAGTACACCTGGCAGAGATGCAGGGTGAACACATTCACGTCCTaGAACACGGGCGCTGTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: GFDSLGGGAKYTWQRCRVNTFTS*NTGAVS Trigger: CGACACAGCGCCCGTGTTCAAGGACGTGAATGTGTT...CACCCTGCATCTCTGCCAGGTGTACTTAGCACCTCCTCCCAGGCTGTCAAAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS-3UTR CAA 90 bp | CCGGCGCTAACACTGTCATGGGCATACAGTCCTGGCTCTGTCCCAGGAGCTAAGAACACATTCACGTCCTaGAACACGGGCGCTGTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: PALTLSWAYSPGSVPGAKNTFTS*NTGAVS Trigger: CGACACAGCGCCCGTGTTCAAGGACGTGAATGTGTT...CTTAGCTCCTGGGACAGAGCCAGGACTGTATGCCCATGACAGTGTTAGCGCCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS-3UTR CAA 90 bp | CTGTCATGGGCATACAGTCCTGGCTCTGTCCCAGGAGCTAAGCTAGGTGGCAGTACCTTCAGGAACAGCTaGGCCAAGTGCTTGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LSWAYSPGSVPGAKLGGSTFRNS*AKCLPR Trigger: CCTGGGCAAGCACTTGGCCAAGCTGTTCCTGAAGGT...ACTGCCACCTAGCTTAGCTCCTGGGACAGAGCCAGGACTGTATGCCCATGACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR CAA 90 bp | GGCTTTGACAGCCTGGGAGGAGGTGCTAAGTACACCTGGCAGAGATGCAGGGTGTGCATGGTCATCTCCTaGCCATGTTCCTTGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GFDSLGGGAKYTWQRCRVCMVIS*PCSLLL Trigger: GAGCAGCAAGGAACATGGCAAGGAGATGACCATGCA...CACCCTGCATCTCTGCCAGGTGTACTTAGCACCTCCTCCCAGGCTGTCAAAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS-3UTR CAA 90 bp | CTGTCATGGGCATACAGTCCTGGCTCTGTCCCAGGAGCTAAGCTAGGTGGCAGTATGACACTCCAGCCCTaGGGGATCTGGAAACCATCC | + |
|
Preference number: 5 (lower is better) Translates to: LSWAYSPGSVPGAKLGGSMTLQP*GIWKPS Trigger: GGATGGTTTCCAGATCCCCAAGGGCTGGAGTGTCAT...ACTGCCACCTAGCTTAGCTCCTGGGACAGAGCCAGGACTGTATGCCCATGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS-3UTR CAA 90 bp | TCTCCTTCTCCATTGCTTTCTAGCTACAGCCTCCCCTGCAGCTTCTCCAGACCCACCTTCAGGAACAGCTaGGCCAAGTGCTTGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SPSPLLSSYSLPCSFSRPTFRNS*AKCLPR Trigger: CCTGGGCAAGCACTTGGCCAAGCTGTTCCTGAAGGT...GGGTCTGGAGAAGCTGCAGGGGAGGCTGTAGCTAGAAAGCAATGGAGAAGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS GCA 90 bp | GCCAAACGGGAGGTAATGGAAGCGGCCATCCTTATCCTCACTGCGTaGCTGACTGAAGCGGTCCGGGTCAAACACATTCACGTCCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: AKREVMEAAILILTA*LTEAVRVKHIHVLE Trigger: TTCAAGGACGTGAATGTGTTTGACCCGGACCGCTTCAGTCAGGCACGCAGTGAGGATAAGGATGGCCGCTTCCATTACCTCCCGTTTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204109.2 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR CAA 90 bp | TCTCCTTCTCCATTGCTTTCTAGCTACAGCCTCCCCTGCAGCTTCTCCAGACCCAAGACCTTGCGCTTGTaGCGGTGGATGTCGCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: SPSPLLSSYSLPCSFSRPKTLRL*RWMSPM Trigger: CATTGGCGACATCCACCGCAACAAGCGCAAGGTCTT...GGGTCTGGAGAAGCTGCAGGGGAGGCTGTAGCTAGAAAGCAATGGAGAAGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS-3UTR CAA 90 bp | CCTAGAGACACACCAGAACCCCAAACCCTTCCCAGGAAGGTCCCACATGGCCAAATCTTGGAGAAGACCTaGCGCTTGTTGCGGTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: PRDTPEPQTLPRKVPHGQILEKT*RLLRWM Trigger: CATCCACCGCAACAAGCGCAAGGTCTTCTCCAAGAT...TTGGCCATGTGGGACCTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGTCTCTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR CAA 90 bp | TGGCCAAGGTCAGTGAATAAATATGGGACAGGGGCAAGGGTAGGTAGCGGGGAGAACACATTCACGTCCTaGAACACGGGCGCTGTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: WPRSVNKYGTGARVGSGENTFTS*NTGAVS Trigger: CGACACAGCGCCCGTGTTCAAGGACGTGAATGTGTT...CTCCCCGCTACCTACCCTTGCCCCTGTCCCATATTTATTCACTGACCTTGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS CCA 90 bp | AGAGAGAAGACATTCTCCACAAACTGCTGGTATACCTCAAAGAGGTaGCCCAGGTCCTCCTCAGGGATGCTGAAGCCTAGCAGCACACGC | + |
|
Preference number: 5 (lower is better) Translates to: REKTFSTNCWYTSKR*PRSSSGMLKPSSTR Trigger: GCGTGTGCTGCTAGGCTTCAGCATCCCTGAGGAGGACCTGGGCCACCTCTTTGAGGTATACCAGCAGTTTGTGGAGAATGTCTTCTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204109.2 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR CAA 90 bp | TTCTGGAGAAAAAGAGCCACTACCTTAGTAACAGGCAAAAGCCATGGACGGAAAGGCAGCTTGCAGCTCTaGTCGCGGGTGGCAGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: FWRKRATTLVTGKSHGRKGSLQL*SRVAAQ Trigger: CTGGGCTGCCACCCGCGACAAGAGCTGCAAGCTGCC...TTTCCGTCCATGGCTTTTGCCTGTTACTAAGGTAGTGGCTCTTTTTCTCCAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR CAA 90 bp | AAACAGACAAAATTGCCTAGAGACACACCAGAACCCCAAACCCTTCCCAGGAAGTTGGGGATGGGCAGCTaGCAGCTCTTGTCGCGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: KQTKLPRDTPEPQTLPRKLGMGS*QLLSRV Trigger: CACCCGCGACAAGAGCTGCAAGCTGCCCATCCCCAA...CTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGTCTCTAGGCAATTTTGTCTGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS-3UTR CAA 90 bp | TCTCCTTCTCCATTGCTTTCTAGCTACAGCCTCCCCTGCAGCTTCTCCAGACCCATCTTGGAGAAGACCTaGCGCTTGTTGCGGTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: SPSPLLSSYSLPCSFSRPILEKT*RLLRWM Trigger: CATCCACCGCAACAAGCGCAAGGTCTTCTCCAAGAT...GGGTCTGGAGAAGCTGCAGGGGAGGCTGTAGCTAGAAAGCAATGGAGAAGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR CAA 90 bp | GGCTTTGACAGCCTGGGAGGAGGTGCTAAGTACACCTGGCAGAGATGCAGGGTGTCCTTGCCATGTTCCTaGCTGCTCTCAATGAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: GFDSLGGGAKYTWQRCRVSLPCS*LLSMRM Trigger: CATTCTCATTGAGAGCAGCAAGGAACATGGCAAGGA...CACCCTGCATCTCTGCCAGGTGTACTTAGCACCTCCTCCCAGGCTGTCAAAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR CAA 90 bp | TGGCCAAGGTCAGTGAATAAATATGGGACAGGGGCAAGGGTAGGTAGCGGGGAGTGCATGGTCATCTCCTaGCCATGTTCCTTGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: WPRSVNKYGTGARVGSGECMVIS*PCSLLL Trigger: GAGCAGCAAGGAACATGGCAAGGAGATGACCATGCA...CTCCCCGCTACCTACCCTTGCCCCTGTCCCATATTTATTCACTGACCTTGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS-3UTR CAA 90 bp | ATCCCTCACCAGGACCAGAGTCACATGCCACATCGTCAGTCTGAAGCAGATGGCTCCAGACCAAAGAACTaGACACTGAGGCCATCCACG | + |
|
Preference number: 5 (lower is better) Translates to: IPHQDQSHMPHRQSEADGSRPKN*TLRPST Trigger: CGTGGATGGCCTCAGTGTCAAGTTCTTTGGTCTGGA...GCCATCTGCTTCAGACTGACGATGTGGCATGTGACTCTGGTCCTGGTGAGGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS-3UTR CAA 90 bp | GGCCTGAAGCAGCTCAGAGAGAGGACTCTCTTTCCACCTTACCTCTCTGCTTTCTGTGTCTTGAAAACGTaGCCATACTTCTCCCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GLKQLRERTLFPPYLSAFCVLKT*PYFSRR Trigger: GCGCCGGGAGAAGTATGGCAACGTTTTCAAGACACA...GAAAGCAGAGAGGTAAGGTGGAAAGAGAGTCCTCTCTCTGAGCTGCTTCAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS-3UTR CAA 90 bp | GCGATAGGTAATTTCCAATGTCCAAACTGGTTAGGCTGGTATGGGCCCCTCAAGATGTCGCCAATGGAATaGGCCACCGTGTTGGGACCC | + |
|
Preference number: 5 (lower is better) Translates to: AIGNFQCPNWLGWYGPLKMSPME*ATVLGP Trigger: GGGTCCCAACACGGTGGCCAATTCCATTGGCGACAT...CTTGAGGGGCCCATACCAGCCTAACCAGTTTGGACATTGGAAATTACCTATCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS-3UTR CAA 90 bp | GCAGGGCTGTTAACCCTCTACCAAAGAACTGGGTTAGACCAGACACACTGTCTTGAGAAGACCTTGCGCTaGTTGCGGTGGATGTCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: AGLLTLYQRTGLDQTHCLEKTLR*LRWMSP Trigger: TGGCGACATCCACCGCAACAAGCGCAAGGTCTTCTC...AAGACAGTGTGTCTGGTCTAACCCAGTTCTTTGGTAGAGGGTTAACAGCCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS-3UTR CAA 90 bp | TGGCCAAGGTCAGTGAATAAATATGGGACAGGGGCAAGGGTAGGTAGCGGGGAGTCATGGCTGAAGATCTaGGAGAAGACCTTGCGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: WPRSVNKYGTGARVGSGESWLKI*EKTLRL Trigger: CAAGCGCAAGGTCTTCTCCAAGATCTTCAGCCATGA...CTCCCCGCTACCTACCCTTGCCCCTGTCCCATATTTATTCACTGACCTTGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS TCA 90 bp | TCACCAGTTGGATCTTGGGCAGGTAGCTCTCAAGTGCCTCATGGCTaGAGATCTTGGAGAAGACCTGTAGCAACCAGTGACCAGTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SPVGSWAGSSQVPHG*RSWRRPVATSDQSL Trigger: GAGAGACTGGTCACTGGTTGCTACAGGTCTTCTCCAAGATCTTCAGCCATGAGGCACTTGAGAGCTACCTGCCCAAGATCCAACTGGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204109.2 |
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| CDS GCA 90 bp | TGTATCCTGGATCACCAGTTGGATCTTGGGCAGGTAGCTCTCAAGTaGCTCATGGCTGAAGATCTTGGAGAAGACCTTGCGCTTGTTGCG | + |
|
Preference number: 5 (lower is better) Translates to: CILDHQLDLGQVALK*LMAEDLGEDLALVA Trigger: CGCAACAAGCGCAAGGTCTTCTCCAAGATCTTCAGCCATGAGGCACTTGAGAGCTACCTGCCCAAGATCCAACTGGTGATCCAGGATACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS-3UTR CAA 90 bp | GAGGTCTCTTTTCCTGTTACCTCTGAGACCCATCCGGGCAGACCATCTTTTCTTATGACACTCCAGCCCTaGGGGATCTGGAAACCATCC | + |
|
Preference number: 5 (lower is better) Translates to: EVSFPVTSETHPGRPSFLMTLQP*GIWKPS Trigger: GGATGGTTTCCAGATCCCCAAGGGCTGGAGTGTCAT...AAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS-3UTR CAA 90 bp | TCTCCTTCTCCATTGCTTTCTAGCTACAGCCTCCCCTGCAGCTTCTCCAGACCCCCCAGTAAGTGTGTCTaGAAAACGTTGCCATACTTC | + |
|
Preference number: 5 (lower is better) Translates to: SPSPLLSSYSLPCSFSRPPSKCV*KTLPYF Trigger: GAAGTATGGCAACGTTTTCAAGACACACTTACTGGG...GGGTCTGGAGAAGCTGCAGGGGAGGCTGTAGCTAGAAAGCAATGGAGAAGGAGA 51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS-3UTR CAA 90 bp | GCAGGGCTGTTAACCCTCTACCAAAGAACTGGGTTAGACCAGACACACTGTCTTATCTTGGAGAAGACCTaGCGCTTGTTGCGGTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: AGLLTLYQRTGLDQTHCLILEKT*RLLRWM Trigger: CATCCACCGCAACAAGCGCAAGGTCTTCTCCAAGAT...AAGACAGTGTGTCTGGTCTAACCCAGTTCTTTGGTAGAGGGTTAACAGCCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS-3UTR CAA 90 bp | GAGGTCTCTTTTCCTGTTACCTCTGAGACCCATCCGGGCAGACCATCTTTTCTTTGCATGGTCATCTCCTaGCCATGTTCCTTGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: EVSFPVTSETHPGRPSFLCMVIS*PCSLLL Trigger: GAGCAGCAAGGAACATGGCAAGGAGATGACCATGCA...AAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS-3UTR CAA 90 bp | GAGGTCTCTTTTCCTGTTACCTCTGAGACCCATCCGGGCAGACCATCTTTTCTTTCCAGACCAAAGAACTaGACACTGAGGCCATCCACG | + |
|
Preference number: 5 (lower is better) Translates to: EVSFPVTSETHPGRPSFLSRPKN*TLRPST Trigger: CGTGGATGGCCTCAGTGTCAAGTTCTTTGGTCTGGA...AAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS-3UTR CAA 90 bp | TGGCCAAGGTCAGTGAATAAATATGGGACAGGGGCAAGGGTAGGTAGCGGGGAGAGAATCTCATTCTGGTaGGAGTCCAGACCAAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: WPRSVNKYGTGARVGSGERISFW*ESRPKN Trigger: GTTCTTTGGTCTGGACTCCAACCAGAATGAGATTCT...CTCCCCGCTACCTACCCTTGCCCCTGTCCCATATTTATTCACTGACCTTGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS-3UTR CAA 90 bp | TTCTGGAGAAAAAGAGCCACTACCTTAGTAACAGGCAAAAGCCATGGACGGAAAGAGAAGACCTTGCGCTaGTTGCGGTGGATGTCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FWRKRATTLVTGKSHGRKEKTLR*LRWMSP Trigger: TGGCGACATCCACCGCAACAAGCGCAAGGTCTTCTC...TTTCCGTCCATGGCTTTTGCCTGTTACTAAGGTAGTGGCTCTTTTTCTCCAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS-3UTR CAA 90 bp | GCGATAGGTAATTTCCAATGTCCAAACTGGTTAGGCTGGTATGGGCCCCTCAAGTCCTTGCCATGTTCCTaGCTGCTCTCAATGAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: AIGNFQCPNWLGWYGPLKSLPCS*LLSMRM Trigger: CATTCTCATTGAGAGCAGCAAGGAACATGGCAAGGA...CTTGAGGGGCCCATACCAGCCTAACCAGTTTGGACATTGGAAATTACCTATCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS-3UTR CAA 90 bp | TTCTGGAGAAAAAGAGCCACTACCTTAGTAACAGGCAAAAGCCATGGACGGAAATGTGTCTTGAAAACGTaGCCATACTTCTCCCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: FWRKRATTLVTGKSHGRKCVLKT*PYFSRR Trigger: GCGCCGGGAGAAGTATGGCAACGTTTTCAAGACACA...TTTCCGTCCATGGCTTTTGCCTGTTACTAAGGTAGTGGCTCTTTTTCTCCAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS-3UTR CAA 90 bp | TCTCTTTTCCTGTTACCTCTGAGACCCATCCGGGCAGACCATCTTTTCTTCCTCCCCAGTAAGTGTGTCTaGAAAACGTTGCCATACTTC | + |
|
Preference number: 5 (lower is better) Translates to: SLFLLPLRPIRADHLFFLPSKCV*KTLPYF Trigger: GAAGTATGGCAACGTTTTCAAGACACACTTACTGGG...GAGGAAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS-3UTR CAA 90 bp | TTCTGTGCCTCTGTTTTCTGGAGAAAAAGAGCCACTACCTTAGTAACAGGCAAAAAGACCTTGCGCTTGTaGCGGTGGATGTCGCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: FCASVFWRKRATTLVTGKKTLRL*RWMSPM Trigger: CATTGGCGACATCCACCGCAACAAGCGCAAGGTCTT...TTTGCCTGTTACTAAGGTAGTGGCTCTTTTTCTCCAGAAAACAGAGGCACAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS-3UTR CAA 90 bp | TTCTGGAGAAAAAGAGCCACTACCTTAGTAACAGGCAAAAGCCATGGACGGAAAATCCTGGATCACCAGTaGGATCTTGGGCAGGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: FWRKRATTLVTGKSHGRKILDHQ*DLGQVA Trigger: AGCTACCTGCCCAAGATCCAACTGGTGATCCAGGAT...TTTCCGTCCATGGCTTTTGCCTGTTACTAAGGTAGTGGCTCTTTTTCTCCAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS-3UTR CAA 90 bp | TTCTGGAGAAAAAGAGCCACTACCTTAGTAACAGGCAAAAGCCATGGACGGAAATGCATGGTCATCTCCTaGCCATGTTCCTTGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: FWRKRATTLVTGKSHGRKCMVIS*PCSLLL Trigger: GAGCAGCAAGGAACATGGCAAGGAGATGACCATGCA...TTTCCGTCCATGGCTTTTGCCTGTTACTAAGGTAGTGGCTCTTTTTCTCCAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR CAA 90 bp | GCGATAGGTAATTTCCAATGTCCAAACTGGTTAGGCTGGTATGGGCCCCTCAAGAGAATCTCATTCTGGTaGGAGTCCAGACCAAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: AIGNFQCPNWLGWYGPLKRISFW*ESRPKN Trigger: GTTCTTTGGTCTGGACTCCAACCAGAATGAGATTCT...CTTGAGGGGCCCATACCAGCCTAACCAGTTTGGACATTGGAAATTACCTATCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS-3UTR CAA 90 bp | TCTCTTTTCCTGTTACCTCTGAGACCCATCCGGGCAGACCATCTTTTCTTCCTCAGAATCTCATTCTGGTaGGAGTCCAGACCAAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SLFLLPLRPIRADHLFFLRISFW*ESRPKN Trigger: GTTCTTTGGTCTGGACTCCAACCAGAATGAGATTCT...GAGGAAGAAAAGATGGTCTGCCCGGATGGGTCTCAGAGGTAACAGGAAAAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS-3UTR CAA 90 bp | AAACAGACAAAATTGCCTAGAGACACACCAGAACCCCAAACCCTTCCCAGGAAGCCCAGTAAGTGTGTCTaGAAAACGTTGCCATACTTC | + |
|
Preference number: 5 (lower is better) Translates to: KQTKLPRDTPEPQTLPRKPSKCV*KTLPYF Trigger: GAAGTATGGCAACGTTTTCAAGACACACTTACTGGG...CTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGTCTCTAGGCAATTTTGTCTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR CAA 90 bp | TTCTGTGCCTCTGTTTTCTGGAGAAAAAGAGCCACTACCTTAGTAACAGGCAAAATCCTGGATCACCAGTaGGATCTTGGGCAGGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: FCASVFWRKRATTLVTGKILDHQ*DLGQVA Trigger: AGCTACCTGCCCAAGATCCAACTGGTGATCCAGGAT...TTTGCCTGTTACTAAGGTAGTGGCTCTTTTTCTCCAGAAAACAGAGGCACAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR CAA 90 bp | CAGACCAGTGAAACATCAAGAAATGTGGCTCATAGGATGTTCTGTGTGGCTGGTTCCTTGCCATGTTCCTaGCTGCTCTCAATGAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: QTSETSRNVAHRMFCVAGSLPCS*LLSMRM Trigger: CATTCTCATTGAGAGCAGCAAGGAACATGGCAAGGA...ACCAGCCACACAGAACATCCTATGAGCCACATTTCTTGATGTTTCACTGGTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR CAA 90 bp | AAACAGACAAAATTGCCTAGAGACACACCAGAACCCCAAACCCTTCCCAGGAAGAGAATCTCATTCTGGTaGGAGTCCAGACCAAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: KQTKLPRDTPEPQTLPRKRISFW*ESRPKN Trigger: GTTCTTTGGTCTGGACTCCAACCAGAATGAGATTCT...CTTCCTGGGAAGGGTTTGGGGTTCTGGTGTGTCTCTAGGCAATTTTGTCTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS-3UTR CAA 90 bp | TTCTGTGCCTCTGTTTTCTGGAGAAAAAGAGCCACTACCTTAGTAACAGGCAAATCATGGCTGAAGATCTaGGAGAAGACCTTGCGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FCASVFWRKRATTLVTGKSWLKI*EKTLRL Trigger: CAAGCGCAAGGTCTTCTCCAAGATCTTCAGCCATGA...TTTGCCTGTTACTAAGGTAGTGGCTCTTTTTCTCCAGAAAACAGAGGCACAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
||
| CDS-3UTR CAA 90 bp | TTCTGGAGAAAAAGAGCCACTACCTTAGTAACAGGCAAAAGCCATGGACGGAAATCCTTGCCATGTTCCTaGCTGCTCTCAATGAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: FWRKRATTLVTGKSHGRKSLPCS*LLSMRM Trigger: CATTCTCATTGAGAGCAGCAAGGAACATGGCAAGGA...TTTCCGTCCATGGCTTTTGCCTGTTACTAAGGTAGTGGCTCTTTTTCTCCAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 ENSMUST00000205228.3 |
||
| CDS GCA 72 bp | TCGCGGGTGGCAGCCCAGCGCAGCTGCCACAGCTGCTaGGACACCGCCAGCAGCAGCGTCACGGACACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SRVAAQRSCHSC*DTASSSVTDTR Trigger: CCTGGTGTCCGTGACGCTGCTGCTGGCGGTGTCGCAGCAGCTGTGGCAGCTGCGCTGGGCTGCCACCCGCGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204109.2 ENSMUST00000204146.3 |
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| CDS GCA 72 bp | TTGCAGCTCTTGTCGCGGGTGGCAGCCCAGCGCAGCTaGCACAGCTGCTGCGACACCGCCAGCAGCAGCGTC | + |
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Preference number: 6 (lower is better) Translates to: LQLLSRVAAQRS*HSCCDTASSSV Trigger: GACGCTGCTGCTGGCGGTGTCGCAGCAGCTGTGGCAGCTGCGCTGGGCTGCCACCCGCGACAAGAGCTGCAA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204109.2 ENSMUST00000204146.3 |
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| CDS GCA 72 bp | GCGGGAATCCCATGGAGCCCTTGGGGATGGGCAGCTTaGAGCTCTTGTCGCGGGTGGCAGCCCAGCGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: AGIPWSPWGWAA*SSCRGWQPSAA Trigger: AGCTGCGCTGGGCTGCCACCCGCGACAAGAGCTGCAAGCTGCCCATCCCCAAGGGCTCCATGGGATTCCCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204109.2 ENSMUST00000204146.3 |
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| CDS CAA 90 bp | TCTCCGATGAGCGGGAATCCCATGGAGCCCTTGGGGATGGGCAGCTaGCAGCTCTTGTCGCGGGTGGCAGCCCAGCGCAGCTGCCACAGC | + |
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Preference number: 6 (lower is better) Translates to: SPMSGNPMEPLGMGS*QLLSRVAAQRSCHS Trigger: GCTGTGGCAGCTGCGCTGGGCTGCCACCCGCGACAAGAGCTGCAAGCTGCCCATCCCCAAGGGCTCCATGGGATTCCCGCTCATCGGAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204109.2 ENSMUST00000204146.3 |
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| CDS CCA 72 bp | GCAGCAGCGTCACGGACACCAGGCACGCGGCGAGGGTaGCCAGCGCCGACACCAACTCCAAGCCTTCAAACA | + |
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Preference number: 6 (lower is better) Translates to: AAASRTPGTRRG*PAPTPTPSLQT Trigger: TGTTTGAAGGCTTGGAGTTGGTGTCGGCGCTGGCCACCCTCGCCGCGTGCCTGGTGTCCGTGACGCTGCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204109.2 ENSMUST00000204146.3 |
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| CDS CAA 90 bp | CGCGGCCACTCGGTGCTCACTAGCTGGTGTTCGCCCAGTAGGATCTaGCGCACATTCTCCGCACCGGTCACACGAATCAGCGGCCGCCCC | + |
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Preference number: 6 (lower is better) Translates to: RGHSVLTSWCSPSRI*RTFSAPVTRISGRP Trigger: GGGGCGGCCGCTGATTCGTGTGACCGGTGCGGAGAATGTGCGCAAGATCCTACTGGGCGAACACCAGCTAGTGAGCACCGAGTGGCCGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS GCA 72 bp | GACCCAGCAGTACGCGTGCGCTCCGCGGCCACTCGGTaGTCACTAGCTGGTGTTCGCCCAGTAGGATCTTGC | + |
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Preference number: 6 (lower is better) Translates to: DPAVRVRSAATR*SLAGVRPVGSC Trigger: GCAAGATCCTACTGGGCGAACACCAGCTAGTGAGCACCGAGTGGCCGCGGAGCGCACGCGTACTGCTGGGTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS CCA 72 bp | TGCGGTGGATGTCGCCAATGGAATTGGCCACCGTGTTaGGACCCAGCAGTACGCGTGCGCTCCGCGGCCACT | + |
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Preference number: 6 (lower is better) Translates to: CGGCRQWNWPPC*DPAVRVRSAAT Trigger: AGTGGCCGCGGAGCGCACGCGTACTGCTGGGTCCCAACACGGTGGCCAATTCCATTGGCGACATCCACCGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS CAA 72 bp | CTGGCCAGCTCCACTGCCAGCACCTTCAGGAACAGCTaGGCCAAGTGCTTGCCCAGGCAGGTCCGCACGCCA | + |
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Preference number: 6 (lower is better) Translates to: LASSTASTFRNS*AKCLPRQVRTP Trigger: TGGCGTGCGGACCTGCCTGGGCAAGCACTTGGCCAAGCTGTTCCTGAAGGTGCTGGCAGTGGAGCTGGCCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204109.2 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS CAA 90 bp | TTGCGCTTGTTGCGGTGGATGTCGCCAATGGAATTGGCCACCGTGTaGGGACCCAGCAGTACGCGTGCGCTCCGCGGCCACTCGGTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LRLLRWMSPMELATV*GPSSTRALRGHSVL Trigger: GAGCACCGAGTGGCCGCGGAGCGCACGCGTACTGCTGGGTCCCAACACGGTGGCCAATTCCATTGGCGACATCCACCGCAACAAGCGCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS CCA 72 bp | ACGCGTGCGCTCCGCGGCCACTCGGTGCTCACTAGCTaGTGTTCGCCCAGTAGGATCTTGCGCACATTCTCC | + |
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Preference number: 6 (lower is better) Translates to: TRALRGHSVLTS*CSPSRILRTFS Trigger: GGAGAATGTGCGCAAGATCCTACTGGGCGAACACCAGCTAGTGAGCACCGAGTGGCCGCGGAGCGCACGCGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS CAA 72 bp | CCAGTCTCTCCGATGAGCGGGAATCCCATGGAGCCCTaGGGGATGGGCAGCTTGCAGCTCTTGTCGCGGGTG | + |
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Preference number: 6 (lower is better) Translates to: PVSPMSGNPMEP*GMGSLQLLSRV Trigger: CACCCGCGACAAGAGCTGCAAGCTGCCCATCCCCAAGGGCTCCATGGGATTCCCGCTCATCGGAGAGACTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204109.2 ENSMUST00000204146.3 |
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| CDS TCA 72 bp | CCTCAAAGAGGTGGCCCAGGTCCTCCTCAGGGATGCTaGAGCCTAGCAGCACACGCACGGCCATTCGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: PQRGGPGPPQGC*SLAAHARPFGR Trigger: CCTTCCGAATGGCCGTGCGTGTGCTGCTAGGCTTCAGCATCCCTGAGGAGGACCTGGGCCACCTCTTTGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204109.2 ENSMUST00000204146.3 |
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| CDS GCA 72 bp | GGCCAGCTCGAAGCGGCTAGTGCTGGCCAGCTCCACTaGCAGCACCTTCAGGAACAGCTTGGCCAAGTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: GQLEAASAGQLH*QHLQEQLGQVL Trigger: AAGCACTTGGCCAAGCTGTTCCTGAAGGTGCTGGCAGTGGAGCTGGCCAGCACTAGCCGCTTCGAGCTGGCC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204109.2 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS CAA 90 bp | TCCGCACCGGTCACACGAATCAGCGGCCGCCCCAGTAAGTGTGTCTaGAAAACGTTGCCATACTTCTCCCGGCGCGACGACTGGAAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SAPVTRISGRPSKCV*KTLPYFSRRDDWKP Trigger: CGGCTTCCAGTCGTCGCGCCGGGAGAAGTATGGCAACGTTTTCAAGACACACTTACTGGGGCGGCCGCTGATTCGTGTGACCGGTGCGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS TCA 72 bp | CGGAACCCTGTAGCAACCAGTGACCAGTCTCTCCGATaGGCGGGAATCCCATGGAGCCCTTGGGGATGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: RNPVATSDQSLR*AGIPWSPWGWA Trigger: TGCCCATCCCCAAGGGCTCCATGGGATTCCCGCTCATCGGAGAGACTGGTCACTGGTTGCTACAGGGTTCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS CAA 72 bp | ACCTTGCGCTTGTTGCGGTGGATGTCGCCAATGGAATaGGCCACCGTGTTGGGACCCAGCAGTACGCGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: TLRLLRWMSPME*ATVLGPSSTRA Trigger: CGCACGCGTACTGCTGGGTCCCAACACGGTGGCCAATTCCATTGGCGACATCCACCGCAACAAGCGCAAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS TCA 72 bp | CGCACGGCCATTCGGAAGGTAAGTCGCTGGGCCTCCTaGTATACATTGATGGCCTCAGGCTGGCTGCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RTAIRKVSRWAS*YTLMASGWLLQ Trigger: CTGGAGCAGCCAGCCTGAGGCCATCAATGTATATCAGGAGGCCCAGCGACTTACCTTCCGAATGGCCGTGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204109.2 ENSMUST00000204146.3 |
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| CDS CAA 90 bp | GTCACACGAATCAGCGGCCGCCCCAGTAAGTGTGTCTTGAAAACGTaGCCATACTTCTCCCGGCGCGACGACTGGAAGCCGGAACCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: VTRISGRPSKCVLKT*PYFSRRDDWKPEPC Trigger: ACAGGGTTCCGGCTTCCAGTCGTCGCGCCGGGAGAAGTATGGCAACGTTTTCAAGACACACTTACTGGGGCGGCCGCTGATTCGTGTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS TCA 72 bp | AGAAGACCTGTAGCAACCAGTGACCAGTCTCTCCGATaGGCGGGAATCCCATGGAGCCCTTGGGGATGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: RRPVATSDQSLR*AGIPWSPWGWA Trigger: TGCCCATCCCCAAGGGCTCCATGGGATTCCCGCTCATCGGAGAGACTGGTCACTGGTTGCTACAGGTCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204109.2 |
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| CDS GCA 72 bp | CAAGGATGTGCTTGCACTGGCCGTCGTGGCGTAGGCTaGGAAGATCAACTCCAGGGTTCCATCCTTCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: QGCACTGRRGVG*EDQLQGSILQL Trigger: GAGCTGAAGGATGGAACCCTGGAGTTGATCTTCGCAGCCTACGCCACGACGGCCAGTGCAAGCACATCCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204109.2 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS GCA 72 bp | AGACCAAAGAACTTGACACTGAGGCCATCCACGGGGTaGAAGACGGGGACCAGAGTGATGCGAGGGAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: RPKNLTLRPSTG*KTGTRVMRGKV Trigger: GACCTTCCCTCGCATCACTCTGGTCCCCGTCTTGCACCCCGTGGATGGCCTCAGTGTCAAGTTCTTTGGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204109.2 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS CCA 72 bp | AGAAGACCTTGCGCTTGTTGCGGTGGATGTCGCCAATaGAATTGGCCACCGTGTTGGGACCCAGCAGTACGC | + |
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Preference number: 6 (lower is better) Translates to: RRPCACCGGCRQ*NWPPCWDPAVR Trigger: GCGTACTGCTGGGTCCCAACACGGTGGCCAATTCCATTGGCGACATCCACCGCAACAAGCGCAAGGTCTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS CAA 72 bp | GTCACACGAATCAGCGGCCGCCCCAGTAAGTGTGTCTaGAAAACGTTGCCATACTTCTCCCGGCGCGACGAC | + |
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Preference number: 6 (lower is better) Translates to: VTRISGRPSKCV*KTLPYFSRRDD Trigger: GTCGTCGCGCCGGGAGAAGTATGGCAACGTTTTCAAGACACACTTACTGGGGCGGCCGCTGATTCGTGTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS CAA 72 bp | TCGGTGCTCACTAGCTGGTGTTCGCCCAGTAGGATCTaGCGCACATTCTCCGCACCGGTCACACGAATCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SVLTSWCSPSRI*RTFSAPVTRIS Trigger: GCTGATTCGTGTGACCGGTGCGGAGAATGTGCGCAAGATCCTACTGGGCGAACACCAGCTAGTGAGCACCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS CAA 90 bp | GTCTCCGGCAGAATCTCATTCTGGTTGGAGTCCAGACCAAAGAACTaGACACTGAGGCCATCCACGGGGTGCAAGACGGGGACCAGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: VSGRISFWLESRPKN*TLRPSTGCKTGTRV Trigger: CACTCTGGTCCCCGTCTTGCACCCCGTGGATGGCCTCAGTGTCAAGTTCTTTGGTCTGGACTCCAACCAGAATGAGATTCTGCCGGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204109.2 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS TCA 72 bp | TCACACGAATCAGCGGCCGCCCCAGTAAGTGTGTCTTaGAAACGTTGCCATACTTCTCCCGGCGCGACGACT | + |
|
Preference number: 6 (lower is better) Translates to: SHESAAAPVSVS*KRCHTSPGATT Trigger: AGTCGTCGCGCCGGGAGAAGTATGGCAACGTTTTCAAGACACACTTACTGGGGCGGCCGCTGATTCGTGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS CAA 90 bp | CTCAGGCTGGCTGCTCCAGGCTCGAAGTGTATCCTGGATCACCAGTaGGATCTTGGGCAGGTAGCTCTCAAGTGCCTCATGGCTGAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: LRLAAPGSKCILDHQ*DLGQVALKCLMAED Trigger: ATCTTCAGCCATGAGGCACTTGAGAGCTACCTGCCCAAGATCCAACTGGTGATCCAGGATACACTTCGAGCCTGGAGCAGCCAGCCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204109.2 ENSMUST00000204146.3 |
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| CDS TCA 72 bp | GCTTCTCCAGCACAGCAGGGTGTTTTAGCAGTTGCATaGTCAAGGATGTGCTTGCACTGGCCGTCGTGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: ASPAQQGVLAVA*SRMCLHWPSWR Trigger: ACGCCACGACGGCCAGTGCAAGCACATCCTTGATCATGCAACTGCTAAAACACCCTGCTGTGCTGGAGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204109.2 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS CAA 72 bp | GCTGCTCCAGGCTCGAAGTGTATCCTGGATCACCAGTaGGATCTTGGGCAGGTAGCTCTCAAGTGCCTCATG | + |
|
Preference number: 6 (lower is better) Translates to: AAPGSKCILDHQ*DLGQVALKCLM Trigger: CATGAGGCACTTGAGAGCTACCTGCCCAAGATCCAACTGGTGATCCAGGATACACTTCGAGCCTGGAGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204109.2 ENSMUST00000204146.3 |
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| CDS GCA 72 bp | AGGTCCACTGGCAGAGAGAAGACATTCTCCACAAACTaGTGGTATACCTCAAAGAGGTGGCCCAGGTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RSTGREKTFSTN*WYTSKRWPRSS Trigger: GGAGGACCTGGGCCACCTCTTTGAGGTATACCAGCAGTTTGTGGAGAATGTCTTCTCTCTGCCAGTGGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204109.2 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS GCA 72 bp | CTCAGCTTCTCCAGCACAGCAGGGTGTTTTAGCAGTTaGATGATCAAGGATGTGCTTGCACTGGCCGTCGTG | + |
|
Preference number: 6 (lower is better) Translates to: LSFSSTAGCFSS*MIKDVLALAVV Trigger: CACGACGGCCAGTGCAAGCACATCCTTGATCATGCAACTGCTAAAACACCCTGCTGTGCTGGAGAAGCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204109.2 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS CCA 72 bp | ACATTCTCCACAAACTGCTGGTATACCTCAAAGAGGTaGCCCAGGTCCTCCTCAGGGATGCTGAAGCCTAGC | + |
|
Preference number: 6 (lower is better) Translates to: TFSTNCWYTSKR*PRSSSGMLKPS Trigger: GCTAGGCTTCAGCATCCCTGAGGAGGACCTGGGCCACCTCTTTGAGGTATACCAGCAGTTTGTGGAGAATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204109.2 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS CAA 72 bp | TTCAGCTCCTGCATGGTCATCTCCTTGCCATGTTCCTaGCTGCTCTCAATGAGAATGTCCAGGGCGTCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: FSSCMVISLPCS*LLSMRMSRASE Trigger: CTCGGACGCCCTGGACATTCTCATTGAGAGCAGCAAGGAACATGGCAAGGAGATGACCATGCAGGAGCTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204109.2 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS CAA 72 bp | AGAATCTCATTCTGGTTGGAGTCCAGACCAAAGAACTaGACACTGAGGCCATCCACGGGGTGCAAGACGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RISFWLESRPKN*TLRPSTGCKTG Trigger: CCCCGTCTTGCACCCCGTGGATGGCCTCAGTGTCAAGTTCTTTGGTCTGGACTCCAACCAGAATGAGATTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204109.2 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS CAA 90 bp | ATCAACTCCAGGGTTCCATCCTTCAGCTCCTGCATGGTCATCTCCTaGCCATGTTCCTTGCTGCTCTCAATGAGAATGTCCAGGGCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: INSRVPSFSSCMVIS*PCSLLLSMRMSRAS Trigger: GGACGCCCTGGACATTCTCATTGAGAGCAGCAAGGAACATGGCAAGGAGATGACCATGCAGGAGCTGAAGGATGGAACCCTGGAGTTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204109.2 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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| CDS GCA 72 bp | GATCACCAGTTGGATCTTGGGCAGGTAGCTCTCAAGTaGCTCATGGCTGAAGATCTTGGAGAAGACCTTGCG | + |
|
Preference number: 6 (lower is better) Translates to: DHQLDLGQVALK*LMAEDLGEDLA Trigger: CGCAAGGTCTTCTCCAAGATCTTCAGCCATGAGGCACTTGAGAGCTACCTGCCCAAGATCCAACTGGTGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204146.3 |
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| CDS CCA 72 bp | CTCAACATGGCCTCTGTCTCCGGCAGAATCTCATTCTaGTTGGAGTCCAGACCAAAGAACTTGACACTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LNMASVSGRISF*LESRPKNLTLR Trigger: CCTCAGTGTCAAGTTCTTTGGTCTGGACTCCAACCAGAATGAGATTCTGCCGGAGACAGAGGCCATGTTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000077705.6 ENSMUST00000168003.9 ENSMUST00000204109.2 ENSMUST00000204146.3 ENSMUST00000205228.3 |
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