RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CYP26A1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000024987

Ensembl transcript IDs: ENSMUST00000025946.7

Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp ACGCGGGCCAGTGCACCGACACCAACCGGTGCTCTCCCAGCAAGATaGGCCGCACATTATCCGCGCCCATCACCCGCACCGTGGGCCGCC +
Preference number: 5 (lower is better)
Translates to: TRASAPTPTGALPAR*AAHYPRPSPAPWAA
Trigger: GGCGGCCCACGGTGCGGGTGATGGGCGCGGATAATGTGCGGCGCATCTTGCTGGGAGAGCACCGGTTGGTGTCGGTGCACTGGCCCGCGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025946.7
CDS GCA 90 bp GAGAGGCAGCCAGCGCCCAGGATGGTGCGCACCGACGCGGGCCAGTaGACCGACACCAACCGGTGCTCTCCCAGCAAGATGCGCCGCACA +
Preference number: 5 (lower is better)
Translates to: ERQPAPRMVRTDAGQ*TDTNRCSPSKMRRT
Trigger: TGTGCGGCGCATCTTGCTGGGAGAGCACCGGTTGGTGTCGGTGCACTGGCCCGCGTCGGTGCGCACCATCCTGGGCGCTGGCTGCCTCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025946.7
CDS GCA 90 bp GCGAGGAATCGTGCAGGTTGGAGAGGCAGCCAGCGCCCAGGATGGTaGGCACCGACGCGGGCCAGTGCACCGACACCAACCGGTGCTCTC +
Preference number: 5 (lower is better)
Translates to: ARNRAGWRGSQRPGW*APTRASAPTPTGAL
Trigger: GAGAGCACCGGTTGGTGTCGGTGCACTGGCCCGCGTCGGTGCGCACCATCCTGGGCGCTGGCTGCCTCTCCAACCTGCACGATTCCTCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025946.7
CDS GCA 90 bp GAGAAGAGATTGCGGGTCATCTCCTCGAAAGCCTCCACGAGCTGCTaGTCGTCCTCCCCGCCGCCCGCTGGACCCGGCTCGCAGCCCAGC +
Preference number: 5 (lower is better)
Translates to: EKRLRVISSKASTSC*SSSPPPAGPGSQPS
Trigger: GCTGGGCTGCGAGCCGGGTCCAGCGGGCGGCGGGGAGGACGAGCAGCAGCTCGTGGAGGCTTTCGAGGAGATGACCCGCAATCTCTTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025946.7
CDS GCA 90 bp AGAGAGAAGAGATTGCGGGTCATCTCCTCGAAAGCCTCCACGAGCTaGTGCTCGTCCTCCCCGCCGCCCGCTGGACCCGGCTCGCAGCCC +
Preference number: 5 (lower is better)
Translates to: REKRLRVISSKASTS*CSSSPPPAGPGSQP
Trigger: GGGCTGCGAGCCGGGTCCAGCGGGCGGCGGGGAGGACGAGCAGCAGCTCGTGGAGGCTTTCGAGGAGATGACCCGCAATCTCTTCTCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025946.7
CDS CCA 90 bp TGTGCGAGGAATCGTGCAGGTTGGAGAGGCAGCCAGCGCCCAGGATaGTGCGCACCGACGCGGGCCAGTGCACCGACACCAACCGGTGCT +
Preference number: 5 (lower is better)
Translates to: CARNRAGWRGSQRPG*CAPTRASAPTPTGA
Trigger: AGCACCGGTTGGTGTCGGTGCACTGGCCCGCGTCGGTGCGCACCATCCTGGGCGCTGGCTGCCTCTCCAACCTGCACGATTCCTCGCACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025946.7
CDS GCA 90 bp AGGATGGTGCGCACCGACGCGGGCCAGTGCACCGACACCAACCGGTaGTCTCCCAGCAAGATGCGCCGCACATTATCCGCGCCCATCACC +
Preference number: 5 (lower is better)
Translates to: RMVRTDAGQCTDTNR*SPSKMRRTLSAPIT
Trigger: GGTGATGGGCGCGGATAATGTGCGGCGCATCTTGCTGGGAGAGCACCGGTTGGTGTCGGTGCACTGGCCCGCGTCGGTGCGCACCATCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025946.7
CDS TCA 90 bp GGAGGCCGCGCTCGCCGCAGCTTAGCCACTGCTCCAGACAACTGCTaGCTTCCTCAGCGATCACGGGCACGTAGCACTGGAGTGCCTCGC +
Preference number: 5 (lower is better)
Translates to: GGRARRSLATAPDNC*LPQRSRARSTGVPR
Trigger: GCGAGGCACTCCAGTGCTACGTGCCCGTGATCGCTGAGGAAGTCAGCAGTTGTCTGGAGCAGTGGCTAAGCTGCGGCGAGCGCGGCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025946.7
CDS TCA 90 bp AGGAGCTGCAGCGCGTCCTTGCAACCCCCATCCGGCTCTGTAGCCTaGAGCCGGCGGATCTTGGCGCGAATGTTCTCCTCGATGCGCGCG +
Preference number: 5 (lower is better)
Translates to: RSCSASLQPPSGSVA*SRRILARMFSSMRA
Trigger: CGCGCGCATCGAGGAGAACATTCGCGCCAAGATCCGCCGGCTTCAGGCTACAGAGCCGGATGGGGGTTGCAAGGACGCGCTGCAGCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025946.7
CDS GCA 90 bp AAGGCCTGCATAATCACCTTCTTTCGCTGCTTGTGCGAGGAATCGTaGAGGTTGGAGAGGCAGCCAGCGCCCAGGATGGTGCGCACCGAC +
Preference number: 5 (lower is better)
Translates to: KACIITFFRCLCEES*RLERQPAPRMVRTD
Trigger: GTCGGTGCGCACCATCCTGGGCGCTGGCTGCCTCTCCAACCTGCACGATTCCTCGCACAAGCAGCGAAAGAAGGTGATTATGCAGGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025946.7
CDS TCA 90 bp CCATCACCCGCACCGTGGGCCGCCCAAACAGATGCGTCTTGTAGATaGAGCCGTATTTCCTGCGCTTCATCTGCAGAAACTTCCTCCGCT +
Preference number: 5 (lower is better)
Translates to: PSPAPWAAQTDASCR*SRISCASSAETSSA
Trigger: AGCGGAGGAAGTTTCTGCAGATGAAGCGCAGGAAATACGGCTTCATCTACAAGACGCATCTGTTTGGGCGGCCCACGGTGCGGGTGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025946.7
CDS GCA 90 bp ACAACTGCTGACTTCCTCAGCGATCACGGGCACGTAGCACTGGAGTaGCTCGCGGCTGAAGGCCTGCATAATCACCTTCTTTCGCTGCTT +
Preference number: 5 (lower is better)
Translates to: TTADFLSDHGHVALE*LAAEGLHNHLLSLL
Trigger: AAGCAGCGAAAGAAGGTGATTATGCAGGCCTTCAGCCGCGAGGCACTCCAGTGCTACGTGCCCGTGATCGCTGAGGAAGTCAGCAGTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025946.7
CDS CCA 90 bp TTTTGCAAACTCTTTGCCTACACAGCTCCGAAGGCCTCCTCCAAATaGAATGAAGCTGAACCGGGAAGCATCCTCTGGATGAGGCACTAT +
Preference number: 5 (lower is better)
Translates to: FCKLFAYTAPKASSK*NEAEPGSILWMRHY
Trigger: ATAGTGCCTCATCCAGAGGATGCTTCCCGGTTCAGCTTCATTCCATTTGGAGGAGGCCTTCGGAGCTGTGTAGGCAAAGAGTTTGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025946.7
CDS TCA 90 bp CCTCCTCCAAATGGAATGAAGCTGAACCGGGAAGCATCCTCTGGATaGGGCACTATAAAGCGGTCGGGATTAAATTCCTCCTTGTTAGTG +
Preference number: 5 (lower is better)
Translates to: PPPNGMKLNREASSG*GTIKRSGLNSSLLV
Trigger: CACTAACAAGGAGGAATTTAATCCCGACCGCTTTATAGTGCCTCATCCAGAGGATGCTTCCCGGTTCAGCTTCATTCCATTTGGAGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025946.7
CDS CCA 90 bp AAGGCCTCCTCCAAATGGAATGAAGCTGAACCGGGAAGCATCCTCTaGATGAGGCACTATAAAGCGGTCGGGATTAAATTCCTCCTTGTT +
Preference number: 5 (lower is better)
Translates to: KASSKWNEAEPGSIL*MRHYKAVGIKFLLV
Trigger: AACAAGGAGGAATTTAATCCCGACCGCTTTATAGTGCCTCATCCAGAGGATGCTTCCCGGTTCAGCTTCATTCCATTTGGAGGAGGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025946.7
CDS GCA 90 bp ACAGTGCCTAGCCAGCTCCACTGTAAATATCTTAAGAAGAATTTTTaGAAACTCTTTGCCTACACAGCTCCGAAGGCCTCCTCCAAATGG +
Preference number: 5 (lower is better)
Translates to: TVPSQLHCKYLKKNF*KLFAYTAPKASSKW
Trigger: CCATTTGGAGGAGGCCTTCGGAGCTGTGTAGGCAAAGAGTTTGCAAAAATTCTTCTTAAGATATTTACAGTGGAGCTGGCTAGGCACTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025946.7
CDS GCA 90 bp TACACAGTGGGGCTTGTCTTCATTGTAGGAGGTCCATTTAGAAGCTaGCAATCACAGTGCCTAGCCAGCTCCACTGTAAATATCTTAAGA +
Preference number: 5 (lower is better)
Translates to: YTVGLVFIVGGPFRS*QSQCLASSTVNILR
Trigger: TCTTAAGATATTTACAGTGGAGCTGGCTAGGCACTGTGATTGGCAGCTTCTAAATGGACCTCCTACAATGAAGACAAGCCCCACTGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025946.7
CDS GCA 90 bp TATAAAGCGGTCGGGATTAAATTCCTCCTTGTTAGTGAAGATATCTaGCACATCGTGGGTGTCACAGATACTGTAAATAACATTCCAGCC +
Preference number: 5 (lower is better)
Translates to: YKAVGIKFLLVSEDI*HIVGVTDTVNNIPA
Trigger: GGCTGGAATGTTATTTACAGTATCTGTGACACCCACGATGTGGCAGATATCTTCACTAACAAGGAGGAATTTAATCCCGACCGCTTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025946.7
CDS GCA 72 bp CCAGCGCCCAGGATGGTGCGCACCGACGCGGGCCAGTaGACCGACACCAACCGGTGCTCTCCCAGCAAGATG +
Preference number: 6 (lower is better)
Translates to: PAPRMVRTDAGQ*TDTNRCSPSKM
Trigger: CATCTTGCTGGGAGAGCACCGGTTGGTGTCGGTGCACTGGCCCGCGTCGGTGCGCACCATCCTGGGCGCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025946.7
CDS GCA 72 bp CGCACCGACGCGGGCCAGTGCACCGACACCAACCGGTaGTCTCCCAGCAAGATGCGCCGCACATTATCCGCG +
Preference number: 6 (lower is better)
Translates to: RTDAGQCTDTNR*SPSKMRRTLSA
Trigger: CGCGGATAATGTGCGGCGCATCTTGCTGGGAGAGCACCGGTTGGTGTCGGTGCACTGGCCCGCGTCGGTGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025946.7
CDS CCA 72 bp AATCGTGCAGGTTGGAGAGGCAGCCAGCGCCCAGGATaGTGCGCACCGACGCGGGCCAGTGCACCGACACCA +
Preference number: 6 (lower is better)
Translates to: NRAGWRGSQRPG*CAPTRASAPTP
Trigger: TGGTGTCGGTGCACTGGCCCGCGTCGGTGCGCACCATCCTGGGCGCTGGCTGCCTCTCCAACCTGCACGATT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025946.7
CDS GCA 72 bp AGTGCACCGACACCAACCGGTGCTCTCCCAGCAAGATaGGCCGCACATTATCCGCGCCCATCACCCGCACCG +
Preference number: 6 (lower is better)
Translates to: SAPTPTGALPAR*AAHYPRPSPAP
Trigger: CGGTGCGGGTGATGGGCGCGGATAATGTGCGGCGCATCTTGCTGGGAGAGCACCGGTTGGTGTCGGTGCACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025946.7
CDS TCA 72 bp AGCGCGTCCTTGCAACCCCCATCCGGCTCTGTAGCCTaGAGCCGGCGGATCTTGGCGCGAATGTTCTCCTCG +
Preference number: 6 (lower is better)
Translates to: SASLQPPSGSVA*SRRILARMFSS
Trigger: CGAGGAGAACATTCGCGCCAAGATCCGCCGGCTTCAGGCTACAGAGCCGGATGGGGGTTGCAAGGACGCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025946.7
CDS CCA 72 bp CCTTCTTTCGCTGCTTGTGCGAGGAATCGTGCAGGTTaGAGAGGCAGCCAGCGCCCAGGATGGTGCGCACCG +
Preference number: 6 (lower is better)
Translates to: PSFAACARNRAG*RGSQRPGWCAP
Trigger: CGGTGCGCACCATCCTGGGCGCTGGCTGCCTCTCCAACCTGCACGATTCCTCGCACAAGCAGCGAAAGAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025946.7
CDS CAA 90 bp TGCATAATCACCTTCTTTCGCTGCTTGTGCGAGGAATCGTGCAGGTaGGAGAGGCAGCCAGCGCCCAGGATGGTGCGCACCGACGCGGGC +
Preference number: 6 (lower is better)
Translates to: CIITFFRCLCEESCR*ERQPAPRMVRTDAG
Trigger: GCCCGCGTCGGTGCGCACCATCCTGGGCGCTGGCTGCCTCTCCAACCTGCACGATTCCTCGCACAAGCAGCGAAAGAAGGTGATTATGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025946.7
CDS GCA 72 bp CTCTCTCCCCTCTCCCACGAGTGCTCAATCAGGAGCTaGAGCGCGTCCTTGCAACCCCCATCCGGCTCTGTA +
Preference number: 6 (lower is better)
Translates to: LSPLSHECSIRS*SASLQPPSGSV
Trigger: TACAGAGCCGGATGGGGGTTGCAAGGACGCGCTGCAGCTCCTGATTGAGCACTCGTGGGAGAGGGGAGAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025946.7
CDS CAA 72 bp ACCTTCTTTCGCTGCTTGTGCGAGGAATCGTGCAGGTaGGAGAGGCAGCCAGCGCCCAGGATGGTGCGCACC +
Preference number: 6 (lower is better)
Translates to: TFFRCLCEESCR*ERQPAPRMVRT
Trigger: GGTGCGCACCATCCTGGGCGCTGGCTGCCTCTCCAACCTGCACGATTCCTCGCACAAGCAGCGAAAGAAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025946.7
CDS TCA 72 bp GCTCGCCGCAGCTTAGCCACTGCTCCAGACAACTGCTaGCTTCCTCAGCGATCACGGGCACGTAGCACTGGA +
Preference number: 6 (lower is better)
Translates to: ARRSLATAPDNC*LPQRSRARSTG
Trigger: TCCAGTGCTACGTGCCCGTGATCGCTGAGGAAGTCAGCAGTTGTCTGGAGCAGTGGCTAAGCTGCGGCGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025946.7
CDS CAA 90 bp CGGTACAGGCCGCTAAAGGGCACGTCAATGGGAAGAGAGAAGAGATaGCGGGTCATCTCCTCGAAAGCCTCCACGAGCTGCTGCTCGTCC +
Preference number: 6 (lower is better)
Translates to: RYRPLKGTSMGREKR*RVISSKASTSCCSS
Trigger: GGACGAGCAGCAGCTCGTGGAGGCTTTCGAGGAGATGACCCGCAATCTCTTCTCTCTTCCCATTGACGTGCCCTTTAGCGGCCTGTACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025946.7
CDS GCA 72 bp GACTTCCTCAGCGATCACGGGCACGTAGCACTGGAGTaGCTCGCGGCTGAAGGCCTGCATAATCACCTTCTT +
Preference number: 6 (lower is better)
Translates to: DFLSDHGHVALE*LAAEGLHNHLL
Trigger: AAGAAGGTGATTATGCAGGCCTTCAGCCGCGAGGCACTCCAGTGCTACGTGCCCGTGATCGCTGAGGAAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025946.7
CDS GCA 72 bp ATAATCACCTTCTTTCGCTGCTTGTGCGAGGAATCGTaGAGGTTGGAGAGGCAGCCAGCGCCCAGGATGGTG +
Preference number: 6 (lower is better)
Translates to: IITFFRCLCEES*RLERQPAPRMV
Trigger: CACCATCCTGGGCGCTGGCTGCCTCTCCAACCTGCACGATTCCTCGCACAAGCAGCGAAAGAAGGTGATTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025946.7
CDS GCA 72 bp CTGAAGGCCTGCATAATCACCTTCTTTCGCTGCTTGTaGGAGGAATCGTGCAGGTTGGAGAGGCAGCCAGCG +
Preference number: 6 (lower is better)
Translates to: LKACIITFFRCL*EESCRLERQPA
Trigger: CGCTGGCTGCCTCTCCAACCTGCACGATTCCTCGCACAAGCAGCGAAAGAAGGTGATTATGCAGGCCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025946.7
CDS CAA 72 bp CGGCTGAAGGCCTGCATAATCACCTTCTTTCGCTGCTaGTGCGAGGAATCGTGCAGGTTGGAGAGGCAGCCA +
Preference number: 6 (lower is better)
Translates to: RLKACIITFFRC*CEESCRLERQP
Trigger: TGGCTGCCTCTCCAACCTGCACGATTCCTCGCACAAGCAGCGAAAGAAGGTGATTATGCAGGCCTTCAGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025946.7
CDS CAA 72 bp CCGCTAAAGGGCACGTCAATGGGAAGAGAGAAGAGATaGCGGGTCATCTCCTCGAAAGCCTCCACGAGCTGC +
Preference number: 6 (lower is better)
Translates to: PLKGTSMGREKR*RVISSKASTSC
Trigger: GCAGCTCGTGGAGGCTTTCGAGGAGATGACCCGCAATCTCTTCTCTCTTCCCATTGACGTGCCCTTTAGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025946.7
CDS TCA 72 bp GCACCGTGGGCCGCCCAAACAGATGCGTCTTGTAGATaGAGCCGTATTTCCTGCGCTTCATCTGCAGAAACT +
Preference number: 6 (lower is better)
Translates to: APWAAQTDASCR*SRISCASSAET
Trigger: AGTTTCTGCAGATGAAGCGCAGGAAATACGGCTTCATCTACAAGACGCATCTGTTTGGGCGGCCCACGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025946.7
CDS CCA 72 bp CTCTTTGCCTACACAGCTCCGAAGGCCTCCTCCAAATaGAATGAAGCTGAACCGGGAAGCATCCTCTGGATG +
Preference number: 6 (lower is better)
Translates to: LFAYTAPKASSK*NEAEPGSILWM
Trigger: CATCCAGAGGATGCTTCCCGGTTCAGCTTCATTCCATTTGGAGGAGGCCTTCGGAGCTGTGTAGGCAAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025946.7
CDS CCA 72 bp CAGCTCAAAAGTCTTCAGAGCAACCCGAAACCCTCCTaGAACCGGAGGATTCAATCGCAGGGTCTCCTTAAT +
Preference number: 6 (lower is better)
Translates to: QLKSLQSNPKPS*NRRIQSQGLLN
Trigger: ATTAAGGAGACCCTGCGATTGAATCCTCCGGTTCCAGGAGGGTTTCGGGTTGCTCTGAAGACTTTTGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025946.7
CDS TCA 72 bp GTGATCAGTGACGTCGCAGCACTGGCTGTAGTTTCATaGCCACCAAAGAGGAGCTCTGTTGACGATTGTTTT +
Preference number: 6 (lower is better)
Translates to: VISDVAALAVVS*PPKRSSVDDCF
Trigger: AAAACAATCGTCAACAGAGCTCCTCTTTGGTGGTCATGAAACTACAGCCAGTGCTGCGACGTCACTGATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025946.7
CDS CCA 72 bp TCCAAATGGAATGAAGCTGAACCGGGAAGCATCCTCTaGATGAGGCACTATAAAGCGGTCGGGATTAAATTC +
Preference number: 6 (lower is better)
Translates to: SKWNEAEPGSIL*MRHYKAVGIKF
Trigger: GAATTTAATCCCGACCGCTTTATAGTGCCTCATCCAGAGGATGCTTCCCGGTTCAGCTTCATTCCATTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025946.7
CDS GCA 72 bp ATTGTAGGAGGTCCATTTAGAAGCTGCCAATCACAGTaGCTAGCCAGCTCCACTGTAAATATCTTAAGAAGA +
Preference number: 6 (lower is better)
Translates to: IVGGPFRSCQSQ*LASSTVNILRR
Trigger: TCTTCTTAAGATATTTACAGTGGAGCTGGCTAGGCACTGTGATTGGCAGCTTCTAAATGGACCTCCTACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025946.7
CDS GCA 72 bp GTCGGGATTAAATTCCTCCTTGTTAGTGAAGATATCTaGCACATCGTGGGTGTCACAGATACTGTAAATAAC +
Preference number: 6 (lower is better)
Translates to: VGIKFLLVSEDI*HIVGVTDTVNN
Trigger: GTTATTTACAGTATCTGTGACACCCACGATGTGGCAGATATCTTCACTAACAAGGAGGAATTTAATCCCGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025946.7