Pregenerated sensors for CYP24A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038567Ensembl transcript IDs: ENSMUST00000038824.6
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTTGTGGGCGGCGCCTGGCATTCCCGCCCCGCCATGTGCTTCCCTaGGTAATGGGCTTTGTAAACATCGTTTTCAGAATCATTCCGCAG | + |
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Preference number: 1 (lower is better) Translates to: CCGRRLAFPPRHVLP*VMGFVNIVFRIIPQ Trigger: CTGCGGAATGATTCTGAAAACGATGTTTACAAAGCCCATTACTCAGGGAAGCACATGGCGGGGCGGGAATGCCAGGCGCCGCCCACAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| 3UTR TCA 90 bp | CAGACCCTAAATTGGGTACCCTATGCCTTTATGGAAAAACATGACTaGAGCAAAGTACCCCAGGGCCCACAGCCACTCACACGCATGTGC | + |
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Preference number: 1 (lower is better) Translates to: QTLNWVPYAFMEKHD*SKVPQGPQPLTRMC Trigger: GCACATGCGTGTGAGTGGCTGTGGGCCCTGGGGTACTTTGCTTCAGTCATGTTTTTCCATAAAGGCATAGGGTACCCAATTTAGGGTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| 3UTR TCA 90 bp | ACTGCAGACCCTAAATTGGGTACCCTATGCCTTTATGGAAAAACATaGCTGAAGCAAAGTACCCCAGGGCCCACAGCCACTCACACGCAT | + |
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Preference number: 1 (lower is better) Translates to: TADPKLGTLCLYGKT*LKQSTPGPTATHTH Trigger: ATGCGTGTGAGTGGCTGTGGGCCCTGGGGTACTTTGCTTCAGTCATGTTTTTCCATAAAGGCATAGGGTACCCAATTTAGGGTCTGCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| 3UTR GCA 90 bp | CTTTGTAAACATCGTTTTCAGAATCATTCCGCAGAAGGCTTTGGGTaGCAGTCTTCGCAGTTGTCCCATGCTCTGGTCCCTGAAGTTCAC | + |
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Preference number: 1 (lower is better) Translates to: LCKHRFQNHSAEGFG*QSSQLSHALVPEVH Trigger: GTGAACTTCAGGGACCAGAGCATGGGACAACTGCGAAGACTGGCACCCAAAGCCTTCTGCGGAATGATTCTGAAAACGATGTTTACAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| 3UTR TCA 90 bp | TACCTAATGTTTAGCTCTGTTTACAACTGGCGTTTCCTCAAATATTaGACAAAACCGAGTATAATAAATGGTTTGTCAGTTCCACTCAGA | + |
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Preference number: 1 (lower is better) Translates to: YLMFSSVYNWRFLKY*TKPSIINGLSVPLR Trigger: TCTGAGTGGAACTGACAAACCATTTATTATACTCGGTTTTGTTCAATATTTGAGGAAACGCCAGTTGTAAACAGAGCTAAACATTAGGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| 3UTR CAA 90 bp | TTTCAGAATCATTCCGCAGAAGGCTTTGGGTGCCAGTCTTCGCAGTaGTCCCATGCTCTGGTCCCTGAAGTTCACCGTCTAGGAATACCG | + |
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Preference number: 2 (lower is better) Translates to: FQNHSAEGFGCQSSQ*SHALVPEVHRLGIP Trigger: CGGTATTCCTAGACGGTGAACTTCAGGGACCAGAGCATGGGACAACTGCGAAGACTGGCACCCAAAGCCTTCTGCGGAATGATTCTGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| 3UTR CAA 90 bp | ATGGGCTTTGTAAACATCGTTTTCAGAATCATTCCGCAGAAGGCTTaGGGTGCCAGTCTTCGCAGTTGTCCCATGCTCTGGTCCCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: MGFVNIVFRIIPQKA*GASLRSCPMLWSLK Trigger: CTTCAGGGACCAGAGCATGGGACAACTGCGAAGACTGGCACCCAAAGCCTTCTGCGGAATGATTCTGAAAACGATGTTTACAAAGCCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| 3UTR-3UTR CCA 90 bp | TGCGTTTATGAAATTGTGCTTACCCAGGGGGCTCAAGCCCCACTATACATACTGTTCCGCAGAAGGCTTTaGGTGCCAGTCTTCGCAGTT | + |
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Preference number: 2 (lower is better) Translates to: CVYEIVLTQGAQAPLYILFRRRL*VPVFAV Trigger: AACTGCGAAGACTGGCACCCAAAGCCTTCTGCGGAA...CAGTATGTATAGTGGGGCTTGAGCCCCCTGGGTAAGCACAATTTCATAAACGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| 3UTR-3UTR GCA 90 bp | TACCCAGGGGGCTCAAGCCCCACTATACATACTGCATCCATAGGGAGTGAGCATCATAAGCAGTTTTCTTaGAGAAGGGGGAAGATTGCT | + |
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Preference number: 2 (lower is better) Translates to: YPGGSSPTIHTASIGSEHHKQFS*RRGKIA Trigger: AGCAATCTTCCCCCTTCTGCAAGAAAACTGCTTATG...ATGCTCACTCCCTATGGATGCAGTATGTATAGTGGGGCTTGAGCCCCCTGGGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| 3UTR-3UTR TCA 90 bp | TACATTTCAGGACATAGCTCCGCACTGCAGACCCTAAATTGGGTACCCTATGCCCAACGAAAGAAGAAATaGCAGAGTCCTCTGCACCAA | + |
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Preference number: 2 (lower is better) Translates to: YISGHSSALQTLNWVPYAQRKKK*QSPLHQ Trigger: TTGGTGCAGAGGACTCTGTCATTTCTTCTTTCGTTG...GGCATAGGGTACCCAATTTAGGGTCTGCAGTGCGGAGCTATGTCCTGAAATGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| 3UTR-3UTR CAA 90 bp | GGCTTTGGGTGCCAGTCTTCGCAGTTGTCCCATGCTCTGGTCCCTGAAGTTCACGCAGAAGGGGGAAGATaGCTGGTCTTGATTTGGGGG | + |
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Preference number: 3 (lower is better) Translates to: GFGCQSSQLSHALVPEVHAEGGR*LVLIWG Trigger: CCCCCAAATCAAGACCAGCAATCTTCCCCCTTCTGC...GTGAACTTCAGGGACCAGAGCATGGGACAACTGCGAAGACTGGCACCCAAAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| 3UTR-3UTR CAA 90 bp | GGCATTCCCGCCCCGCCATGTGCTTCCCTGAGTAATGGGCTTTGTAAACATCGTTGCCAGTCTTCGCAGTaGTCCCATGCTCTGGTCCCT | + |
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Preference number: 3 (lower is better) Translates to: GIPAPPCASLSNGLCKHRCQSSQ*SHALVP Trigger: AGGGACCAGAGCATGGGACAACTGCGAAGACTGGCA...ACGATGTTTACAAAGCCCATTACTCAGGGAAGCACATGGCGGGGCGGGAATGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| 3UTR TCA 72 bp | CGGCGCCTGGCATTCCCGCCCCGCCATGTGCTTCCCTaGGTAATGGGCTTTGTAAACATCGTTTTCAGAATC | + |
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Preference number: 3 (lower is better) Translates to: RRLAFPPRHVLP*VMGFVNIVFRI Trigger: GATTCTGAAAACGATGTTTACAAAGCCCATTACTCAGGGAAGCACATGGCGGGGCGGGAATGCCAGGCGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| 3UTR TCA 72 bp | GTGCCAGTCTTCGCAGTTGTCCCATGCTCTGGTCCCTaGAGTTCACCGTCTAGGAATACCGAAGCCATAAGC | + |
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Preference number: 3 (lower is better) Translates to: VPVFAVVPCSGP*SSPSRNTEAIS Trigger: GCTTATGGCTTCGGTATTCCTAGACGGTGAACTTCAGGGACCAGAGCATGGGACAACTGCGAAGACTGGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| 3UTR GCA 72 bp | CATCGTTTTCAGAATCATTCCGCAGAAGGCTTTGGGTaGCAGTCTTCGCAGTTGTCCCATGCTCTGGTCCCT | + |
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Preference number: 3 (lower is better) Translates to: HRFQNHSAEGFG*QSSQLSHALVP Trigger: AGGGACCAGAGCATGGGACAACTGCGAAGACTGGCACCCAAAGCCTTCTGCGGAATGATTCTGAAAACGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| 3UTR-3UTR CAA 90 bp | TACATTTCAGGACATAGCTCCGCACTGCAGACCCTAAATTGGGTACCCTATGCCAGTGACATCAGGCTCTaGAGGGCTCTGATTGGCTAT | + |
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Preference number: 3 (lower is better) Translates to: YISGHSSALQTLNWVPYASDIRL*RALIGY Trigger: ATAGCCAATCAGAGCCCTCAAGAGCCTGATGTCACT...GGCATAGGGTACCCAATTTAGGGTCTGCAGTGCGGAGCTATGTCCTGAAATGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| 3UTR TCA 72 bp | AATTGGGTACCCTATGCCTTTATGGAAAAACATGACTaGAGCAAAGTACCCCAGGGCCCACAGCCACTCACA | + |
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Preference number: 3 (lower is better) Translates to: NWVPYAFMEKHD*SKVPQGPQPLT Trigger: TGTGAGTGGCTGTGGGCCCTGGGGTACTTTGCTTCAGTCATGTTTTTCCATAAAGGCATAGGGTACCCAATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| 3UTR GCA 72 bp | AAAGGTACCAACGAAAGAAGAAATGACAGAGTCCTCTaGACCAACGAGGCATTCGTAAGCAAGGAGCTGGCT | + |
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Preference number: 3 (lower is better) Translates to: KGTNERRNDRVL*TNEAFVSKELA Trigger: AGCCAGCTCCTTGCTTACGAATGCCTCGTTGGTGCAGAGGACTCTGTCATTTCTTCTTTCGTTGGTACCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| 3UTR TCA 72 bp | AGTATAATAAATGGTTTGTCAGTTCCACTCAGACAATaGAGCCATAGTAGGTCTTCATCAAGGGTAAATGGG | + |
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Preference number: 3 (lower is better) Translates to: SIINGLSVPLRQ*SHSRSSSRVNG Trigger: CCCATTTACCCTTGATGAAGACCTACTATGGCTTCATTGTCTGAGTGGAACTGACAAACCATTTATTATACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS-3UTR CCA 90 bp | GGCATTCCCGCCCCGCCATGTGCTTCCCTGAGTAATGGGCTTTGTAAACATCGTGCTTCACGTGCGCCTTaGATGTCACGGACCTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: GIPAPPCASLSNGLCKHRASRAP*MSRTLG Trigger: CCCCAAGGTCCGTGACATCCAAGGCGCACGTGAAGC...ACGATGTTTACAAAGCCCATTACTCAGGGAAGCACATGGCGGGGCGGGAATGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS-3UTR TCA 90 bp | TTGGGTGCCAGTCTTCGCAGTTGTCCCATGCTCTGGTCCCTGAAGTTCACCGTCAGGCTTTCCAGGGTTTaGTCTCTAGCCGCTGGGGAT | + |
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Preference number: 4 (lower is better) Translates to: LGASLRSCPMLWSLKFTVRLSRV*SLAAGD Trigger: ATCCCCAGCGGCTAGAGATCAAACCCTGGAAAGCCT...GACGGTGAACTTCAGGGACCAGAGCATGGGACAACTGCGAAGACTGGCACCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS-3UTR GCA 90 bp | TGCGTTTATGAAATTGTGCTTACCCAGGGGGCTCAAGCCCCACTATACATACTGGCGCTGCGGACCCGCTaGCACTCCTGTCCTTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: CVYEIVLTQGAQAPLYILALRTR*HSCPSR Trigger: CCTGGAAGGACAGGAGTGGCAGCGGGTCCGCAGCGC...CAGTATGTATAGTGGGGCTTGAGCCCCCTGGGTAAGCACAATTTCATAAACGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS-3UTR TCA 90 bp | TACCCAGGGGGCTCAAGCCCCACTATACATACTGCATCCATAGGGAGTGAGCATGCCACACTTTGGTGTTaGGGCGCTTGTGCAGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: YPGGSSPTIHTASIGSEHATLWC*GACAAP Trigger: TGGAGCTGCACAAGCGCCTCAACACCAAAGTGTGGC...ATGCTCACTCCCTATGGATGCAGTATGTATAGTGGGGCTTGAGCCCCCTGGGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS-3UTR TCA 90 bp | TACCCAGGGGGCTCAAGCCCCACTATACATACTGCATCCATAGGGAGTGAGCATCCAGCTGGAGCTCCGTaGCAGCAGCGTACAGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: YPGGSSPTIHTASIGSEHPAGAP*QQRTVL Trigger: AAGAACTGTACGCTGCTGTCACGGAGCTCCAGCTGG...ATGCTCACTCCCTATGGATGCAGTATGTATAGTGGGGCTTGAGCCCCCTGGGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| 3UTR CAA 72 bp | CATTCCGCAGAAGGCTTTGGGTGCCAGTCTTCGCAGTaGTCCCATGCTCTGGTCCCTGAAGTTCACCGTCTA | + |
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Preference number: 4 (lower is better) Translates to: HSAEGFGCQSSQ*SHALVPEVHRL Trigger: TAGACGGTGAACTTCAGGGACCAGAGCATGGGACAACTGCGAAGACTGGCACCCAAAGCCTTCTGCGGAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS-3UTR GCA 90 bp | TGCGTTTATGAAATTGTGCTTACCCAGGGGGCTCAAGCCCCACTATACATACTGGTGTTGAGGCGCTTGTaGAGCTCCACGGGGGTCACC | + |
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Preference number: 4 (lower is better) Translates to: CVYEIVLTQGAQAPLYILVLRRL*SSTGVT Trigger: GGTGACCCCCGTGGAGCTGCACAAGCGCCTCAACAC...CAGTATGTATAGTGGGGCTTGAGCCCCCTGGGTAAGCACAATTTCATAAACGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS-3UTR CCA 90 bp | TTGGGTGCCAGTCTTCGCAGTTGTCCCATGCTCTGGTCCCTGAAGTTCACCGTCTCGCTGTACAAGTCTTaGATGCGGCCTCTCTCATCA | + |
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Preference number: 4 (lower is better) Translates to: LGASLRSCPMLWSLKFTVSLYKS*MRPLSS Trigger: TGATGAGAGAGGCCGCATCCAAGACTTGTACAGCGA...GACGGTGAACTTCAGGGACCAGAGCATGGGACAACTGCGAAGACTGGCACCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS-3UTR TCA 90 bp | GGCATTCCCGCCCCGCCATGTGCTTCCCTGAGTAATGGGCTTTGTAAACATCGTTCCTCTGTGTCCTTTTaGAGGAGCCCGAATCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: GIPAPPCASLSNGLCKHRSSVSF*RSPNLF Trigger: GAAGAGATTCGGGCTCCTTCAAAAGGACACAGAGGA...ACGATGTTTACAAAGCCCATTACTCAGGGAAGCACATGGCGGGGCGGGAATGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS-3UTR GCA 90 bp | TACCCAGGGGGCTCAAGCCCCACTATACATACTGCATCCATAGGGAGTGAGCATTCTGCCAGTGTGTCGTaGTGTTTCTTCAGGCCACCT | + |
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Preference number: 4 (lower is better) Translates to: YPGGSSPTIHTASIGSEHSASVS*CFFRPP Trigger: AGGTGGCCTGAAGAAACAGCACGACACACTGGCAGA...ATGCTCACTCCCTATGGATGCAGTATGTATAGTGGGGCTTGAGCCCCCTGGGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS-3UTR GCA 90 bp | TGTCACAGAAGATGGAGTGACATCAGGCTCTTGAGGGCTCTGATTGGCTATTGTTCCCAGGCCAGCGTGTaGGCTTGCCACACTTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: CHRRWSDIRLLRALIGYCSQASV*ACHTLV Trigger: CACCAAAGTGTGGCAAGCGCACACGCTGGCCTGGGA...ACAATAGCCAATCAGAGCCCTCAAGAGCCTGATGTCACTCCATCTTCTGTGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS-3UTR CCA 90 bp | TGCGTTTATGAAATTGTGCTTACCCAGGGGGCTCAAGCCCCACTATACATACTGTCCGCACCAGGCTGCTaGGAATATCTCTCTAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: CVYEIVLTQGAQAPLYILSAPGC*EYLSRR Trigger: CCGCCTAGAGAGATATTCCCAGCAGCCTGGTGCGGA...CAGTATGTATAGTGGGGCTTGAGCCCCCTGGGTAAGCACAATTTCATAAACGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS-3UTR TCA 90 bp | TACCCAGGGGGCTCAAGCCCCACTATACATACTGCATCCATAGGGAGTGAGCATGATGCAGGGCTTGACTaGTTTGAAAATGGTGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: YPGGSSPTIHTASIGSEHDAGLD*FENGVP Trigger: TGGGACACCATTTTCAAATCAGTCAAGCCCTGCATC...ATGCTCACTCCCTATGGATGCAGTATGTATAGTGGGGCTTGAGCCCCCTGGGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS-3UTR GCA 90 bp | TGCGTTTATGAAATTGTGCTTACCCAGGGGGCTCAAGCCCCACTATACATACTGAAATCTCCAGTAGGCTaGCCAGCAGTGGCCAGTTGG | + |
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Preference number: 4 (lower is better) Translates to: CVYEIVLTQGAQAPLYILKSPVG*PAVASW Trigger: CCAACTGGCCACTGCTGGGCAGCCTACTGGAGATTT...CAGTATGTATAGTGGGGCTTGAGCCCCCTGGGTAAGCACAATTTCATAAACGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS-3UTR GCA 90 bp | GTGCACACTCTAAAGCCGCAGAGAAAGGTACCAACGAAAGAAGAAATGACAGAGGCCAGCGTGTGCGCTTaGCACACTTTGGTGTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: VHTLKPQRKVPTKEEMTEASVCA*HTLVLR Trigger: CCTCAACACCAAAGTGTGGCAAGCGCACACGCTGGC...CTCTGTCATTTCTTCTTTCGTTGGTACCTTTCTCTGCGGCTTTAGAGTGTGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS-3UTR CCA 90 bp | TGCGTTTATGAAATTGTGCTTACCCAGGGGGCTCAAGCCCCACTATACATACTGCAGCAAAGAGCCAAGTaGAGCTGTAGCTCAGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: CVYEIVLTQGAQAPLYILQQRAK*SCSSAS Trigger: GCTGGCTGAGCTACAGCTCCACTTGGCTCTTTGCTG...CAGTATGTATAGTGGGGCTTGAGCCCCCTGGGTAAGCACAATTTCATAAACGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS-3UTR TCA 90 bp | TACCCAGGGGGCTCAAGCCCCACTATACATACTGCATCCATAGGGAGTGAGCATCAGCCAAGACCTCATTaGTTTTCTTGTCCAGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: YPGGSSPTIHTASIGSEHQPRPH*FSCPAS Trigger: TGAAGCTGGACAAGAAAATCAATGAGGTCTTGGCTG...ATGCTCACTCCCTATGGATGCAGTATGTATAGTGGGGCTTGAGCCCCCTGGGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS-3UTR CCA 90 bp | TGCGTTTATGAAATTGTGCTTACCCAGGGGGCTCAAGCCCCACTATACATACTGGGTCCGAGTTGTGAATaGCACACTTGGGGTAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: CVYEIVLTQGAQAPLYILGPSCE*HTWGKP Trigger: AGGCTTACCCCAAGTGTGCCATTCACAACTCGGACC...CAGTATGTATAGTGGGGCTTGAGCCCCCTGGGTAAGCACAATTTCATAAACGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS-3UTR CCA 90 bp | TGTCACAGAAGATGGAGTGACATCAGGCTCTTGAGGGCTCTGATTGGCTATTGTTTCACCCAGAACGGTTaGCTTGTCAAGGGTCCGAGT | + |
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Preference number: 4 (lower is better) Translates to: CHRRWSDIRLLRALIGYCFTQNG*LVKGPS Trigger: ACTCGGACCCTTGACAAGCCAACCGTTCTGGGTGAA...ACAATAGCCAATCAGAGCCCTCAAGAGCCTGATGTCACTCCATCTTCTGTGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS-3UTR GCA 90 bp | TGTCACAGAAGATGGAGTGACATCAGGCTCTTGAGGGCTCTGATTGGCTATTGTAAATCCGCACCAGGCTaGTGGGAATATCTCTCTAGG | + |
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Preference number: 4 (lower is better) Translates to: CHRRWSDIRLLRALIGYCKSAPG*WEYLSR Trigger: CCTAGAGAGATATTCCCAGCAGCCTGGTGCGGATTT...ACAATAGCCAATCAGAGCCCTCAAGAGCCTGATGTCACTCCATCTTCTGTGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS-3UTR GCA 90 bp | TGTCACAGAAGATGGAGTGACATCAGGCTCTTGAGGGCTCTGATTGGCTATTGTCGCAGCTCATCGATTTaGCCCATAAAATCAGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: CHRRWSDIRLLRALIGYCRSSSI*PIKSAK Trigger: CTTGGCTGATTTTATGGGGCAAATCGATGAGCTGCG...ACAATAGCCAATCAGAGCCCTCAAGAGCCTGATGTCACTCCATCTTCTGTGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS-3UTR CCA 90 bp | TGCGTTTATGAAATTGTGCTTACCCAGGGGGCTCAAGCCCCACTATACATACTGTTCATCCGGAAAATCTaGCCATACTTCTTGTGGTAC | + |
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Preference number: 4 (lower is better) Translates to: CVYEIVLTQGAQAPLYILFIRKI*PYFLWY Trigger: GTACCACAAGAAGTATGGCCAGATTTTCCGGATGAA...CAGTATGTATAGTGGGGCTTGAGCCCCCTGGGTAAGCACAATTTCATAAACGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS-3UTR GCA 90 bp | TGTCACAGAAGATGGAGTGACATCAGGCTCTTGAGGGCTCTGATTGGCTATTGTATAACACAAGGCAGATaGTTTCAAAGGACCATTTGT | + |
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Preference number: 4 (lower is better) Translates to: CHRRWSDIRLLRALIGYCITQGR*FQRTIC Trigger: ACAAATGGTCCTTTGAAAGCATCTGCCTTGTGTTAT...ACAATAGCCAATCAGAGCCCTCAAGAGCCTGATGTCACTCCATCTTCTGTGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS TCA 90 bp | GTAGGCTGCCCAGCAGTGGCCAGTTGGTGGGTCCAGGTAAGGAGGTaGCGTTCCGAGTCTCACCGTCGGTCATCAGCGGGCAGAGGGGCA | + |
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Preference number: 5 (lower is better) Translates to: VGCPAVASWWVQVRR*RSESHRRSSAGRGA Trigger: TGCCCCTCTGCCCGCTGATGACCGACGGTGAGACTCGGAACGTCACCTCCTTACCTGGACCCACCAACTGGCCACTGCTGGGCAGCCTAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS TCA 90 bp | GCCCGTAGGCTTCGTTGCGATGGTCCCGATAGGCTTTCCAGGGTTTaGTCTCTAGCCGCTGGGGATGCGCGCTCTCTGTGCGGTACAGAG | + |
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Preference number: 5 (lower is better) Translates to: ARRLRCDGPDRLSRV*SLAAGDARSLCGTE Trigger: CTCTGTACCGCACAGAGAGCGCGCATCCCCAGCGGCTAGAGATCAAACCCTGGAAAGCCTATCGGGACCATCGCAACGAAGCCTACGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS GCA 90 bp | CTCTCTGTGCGGTACAGAGCTTCCAGCAGGCTCGGCGAGCCCAGATaGACCGAGTCGAAGGAGCCCAGCTTCATCCGGAAAATCTGGCCA | + |
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Preference number: 5 (lower is better) Translates to: LSVRYRASSRLGEPR*TESKEPSFIRKIWP Trigger: TGGCCAGATTTTCCGGATGAAGCTGGGCTCCTTCGACTCGGTGCATCTGGGCTCGCCGAGCCTGCTGGAAGCTCTGTACCGCACAGAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS GCA 90 bp | AGCAAAGAGCCAAGTGGAGCTGTAGCTCAGCCAGCCGGCGCCCGATaGACATCCTCTTCCCGACGCCAAATGGGAGATGAGCGAAGGGGT | + |
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Preference number: 5 (lower is better) Translates to: SKEPSGAVAQPAGAR*TSSSRRQMGDERRG Trigger: ACCCCTTCGCTCATCTCCCATTTGGCGTCGGGAAGAGGATGTGCATCGGGCGCCGGCTGGCTGAGCTACAGCTCCACTTGGCTCTTTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS TCA 90 bp | AAATGGTGTCCCAGGCCAGCGTGTGCGCTTGCCACACTTTGGTGTTaGGGCGCTTGTGCAGCTCCACGGGGGTCACCATCATCTTCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: KWCPRPACALATLWC*GACAAPRGSPSSSQ Trigger: TTGGGAAGATGATGGTGACCCCCGTGGAGCTGCACAAGCGCCTCAACACCAAAGTGTGGCAAGCGCACACGCTGGCCTGGGACACCATTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
||
| CDS GCA 90 bp | CAGGCCAGCGTGTGCGCTTGCCACACTTTGGTGTTGAGGCGCTTGTaGAGCTCCACGGGGGTCACCATCATCTTCCCAAATGTGCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: QASVCACHTLVLRRL*SSTGVTIIFPNVLI Trigger: GATGAGCACATTTGGGAAGATGATGGTGACCCCCGTGGAGCTGCACAAGCGCCTCAACACCAAAGTGTGGCAAGCGCACACGCTGGCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
||
| CDS GCA 90 bp | GGCTTGACTGATTTGAAAATGGTGTCCCAGGCCAGCGTGTGCGCTTaGCACACTTTGGTGTTGAGGCGCTTGTGCAGCTCCACGGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GLTDLKMVSQASVCA*HTLVLRRLCSSTGV Trigger: GACCCCCGTGGAGCTGCACAAGCGCCTCAACACCAAAGTGTGGCAAGCGCACACGCTGGCCTGGGACACCATTTTCAAATCAGTCAAGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
||
| CDS CCA 90 bp | CTCACATCTTCCGCCCGTGGCGTCTGGTTGTCAGGCAGCACGCTCTaGATTTCCCGGAGAAGTCTCTGTTGCACTTGGGGATTCCGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LTSSARGVWLSGSTL*ISRRSLCCTWGFRD Trigger: ATCCCGGAATCCCCAAGTGCAACAGAGACTTCTCCGGGAAATCCAGAGCGTGCTGCCTGACAACCAGACGCCACGGGCGGAAGATGTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
||
| CDS-3UTR CAA 90 bp | TACCCAGGGGGCTCAAGCCCCACTATACATACTGCATCCATAGGGAGTGAGCATCCCAGCAGTGGCCAGTaGGTGGGTCCAGGTAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: YPGGSSPTIHTASIGSEHPSSGQ*VGPGKE Trigger: CTCCTTACCTGGACCCACCAACTGGCCACTGCTGGG...ATGCTCACTCCCTATGGATGCAGTATGTATAGTGGGGCTTGAGCCCCCTGGGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
||
| CDS-3UTR CAA 90 bp | TTGGGTGCCAGTCTTCGCAGTTGTCCCATGCTCTGGTCCCTGAAGTTCACCGTCCCGGAGAAGTCTCTGTaGCACTTGGGGATTCCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LGASLRSCPMLWSLKFTVPEKSL*HLGIPG Trigger: TCCCGGAATCCCCAAGTGCAACAGAGACTTCTCCGG...GACGGTGAACTTCAGGGACCAGAGCATGGGACAACTGCGAAGACTGGCACCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
||
| CDS GCA 90 bp | ATGCAGGGCTTGACTGATTTGAAAATGGTGTCCCAGGCCAGCGTGTaGGCTTGCCACACTTTGGTGTTGAGGCGCTTGTGCAGCTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: MQGLTDLKMVSQASV*ACHTLVLRRLCSST Trigger: CGTGGAGCTGCACAAGCGCCTCAACACCAAAGTGTGGCAAGCGCACACGCTGGCCTGGGACACCATTTTCAAATCAGTCAAGCCCTGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
||
| CDS-3UTR CAA 90 bp | GGCTTTGGGTGCCAGTCTTCGCAGTTGTCCCATGCTCTGGTCCCTGAAGTTCACCTCGCTGTACAAGTCTaGGATGCGGCCTCTCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: GFGCQSSQLSHALVPEVHLAVQV*DAASLI Trigger: GATGAGAGAGGCCGCATCCAAGACTTGTACAGCGAG...GTGAACTTCAGGGACCAGAGCATGGGACAACTGCGAAGACTGGCACCCAAAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
||
| CDS-3UTR CAA 90 bp | GGCATTCCCGCCCCGCCATGTGCTTCCCTGAGTAATGGGCTTTGTAAACATCGTTGCGCTTGCCACACTTaGGTGTTGAGGCGCTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GIPAPPCASLSNGLCKHRCACHT*VLRRLC Trigger: GCACAAGCGCCTCAACACCAAAGTGTGGCAAGCGCA...ACGATGTTTACAAAGCCCATTACTCAGGGAAGCACATGGCGGGGCGGGAATGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
||
| CDS-3UTR CAA 90 bp | GGCTTTGGGTGCCAGTCTTCGCAGTTGTCCCATGCTCTGGTCCCTGAAGTTCACATTCACCCAGAACGGTaGGCTTGTCAAGGGTCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: GFGCQSSQLSHALVPEVHIHPER*ACQGSE Trigger: CTCGGACCCTTGACAAGCCAACCGTTCTGGGTGAAT...GTGAACTTCAGGGACCAGAGCATGGGACAACTGCGAAGACTGGCACCCAAAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
||
| CDS CCA 90 bp | CCCAGATGCACCGAGTCGAAGGAGCCCAGCTTCATCCGGAAAATCTaGCCATACTTCTTGTGGTACTCTGCCAGTGTGTCGTGCTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PRCTESKEPSFIRKI*PYFLWYSASVSCCF Trigger: GAAACAGCACGACACACTGGCAGAGTACCACAAGAAGTATGGCCAGATTTTCCGGATGAAGCTGGGCTCCTTCGACTCGGTGCATCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
||
| CDS CCA 90 bp | TTCTTGTCCAGCTTCATGATTTCCACGGGCTTCATGAGTTTCTTTTaGAAGGCGCTGCGGACCCGCTGCCACTCCTGTCCTTCCAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: FLSSFMISTGFMSFF*KALRTRCHSCPSRI Trigger: GATCCTGGAAGGACAGGAGTGGCAGCGGGTCCGCAGCGCCTTCCAAAAGAAACTCATGAAGCCCGTGGAAATCATGAAGCTGGACAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
||
| CDS-3UTR CAA 90 bp | GGCTTTGGGTGCCAGTCTTCGCAGTTGTCCCATGCTCTGGTCCCTGAAGTTCACATCTGGCCATACTTCTaGTGGTACTCTGCCAGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GFGCQSSQLSHALVPEVHIWPYF*WYSASV Trigger: CACACTGGCAGAGTACCACAAGAAGTATGGCCAGAT...GTGAACTTCAGGGACCAGAGCATGGGACAACTGCGAAGACTGGCACCCAAAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
||
| CDS-3UTR CAA 90 bp | TGTCACAGAAGATGGAGTGACATCAGGCTCTTGAGGGCTCTGATTGGCTATTGTTTGGTGTTGAGGCGCTaGTGCAGCTCCACGGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: CHRRWSDIRLLRALIGYCLVLRR*CSSTGV Trigger: GACCCCCGTGGAGCTGCACAAGCGCCTCAACACCAA...ACAATAGCCAATCAGAGCCCTCAAGAGCCTGATGTCACTCCATCTTCTGTGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
||
| CDS-3UTR CAA 90 bp | TACATTTCAGGACATAGCTCCGCACTGCAGACCCTAAATTGGGTACCCTATGCCTGCCACACTTTGGTGTaGAGGCGCTTGTGCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: YISGHSSALQTLNWVPYACHTLV*RRLCSS Trigger: GGAGCTGCACAAGCGCCTCAACACCAAAGTGTGGCA...GGCATAGGGTACCCAATTTAGGGTCTGCAGTGCGGAGCTATGTCCTGAAATGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
||
| CDS-3UTR CAA 90 bp | TTGGGTGCCAGTCTTCGCAGTTGTCCCATGCTCTGGTCCCTGAAGTTCACCGTCCTTTCAAAGGACCATTaGTTCAGCTCGCTGTACAAG | + |
|
Preference number: 5 (lower is better) Translates to: LGASLRSCPMLWSLKFTVLSKDH*FSSLYK Trigger: CTTGTACAGCGAGCTGAACAAATGGTCCTTTGAAAG...GACGGTGAACTTCAGGGACCAGAGCATGGGACAACTGCGAAGACTGGCACCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
||
| CDS-3UTR CAA 90 bp | TGCGTTTATGAAATTGTGCTTACCCAGGGGGCTCAAGCCCCACTATACATACTGCCCAGAACGGTTGGCTaGTCAAGGGTCCGAGTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: CVYEIVLTQGAQAPLYILPRTVG*SRVRVV Trigger: CACAACTCGGACCCTTGACAAGCCAACCGTTCTGGG...CAGTATGTATAGTGGGGCTTGAGCCCCCTGGGTAAGCACAATTTCATAAACGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
||
| CDS CCA 90 bp | GTAGCCACAATGTTATATTTTTGGATTATCCAGCAAAGAGCCAAGTaGAGCTGTAGCTCAGCCAGCCGGCGCCCGATGCACATCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VATMLYFWIIQQRAK*SCSSASRRPMHILF Trigger: GAAGAGGATGTGCATCGGGCGCCGGCTGGCTGAGCTACAGCTCCACTTGGCTCTTTGCTGGATAATCCAAAAATATAACATTGTGGCTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
||
| CDS-3UTR CAA 90 bp | TACATTTCAGGACATAGCTCCGCACTGCAGACCCTAAATTGGGTACCCTATGCCCAGGGCTTGACTGATTaGAAAATGGTGTCCCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: YISGHSSALQTLNWVPYAQGLTD*KMVSQA Trigger: GGCCTGGGACACCATTTTCAAATCAGTCAAGCCCTG...GGCATAGGGTACCCAATTTAGGGTCTGCAGTGCGGAGCTATGTCCTGAAATGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
||
| CDS-3UTR CAA 90 bp | TACCCAGGGGGCTCAAGCCCCACTATACATACTGCATCCATAGGGAGTGAGCATTGGTCGATGCAGGGCTaGACTGATTTGAAAATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: YPGGSSPTIHTASIGSEHWSMQG*TDLKMV Trigger: CACCATTTTCAAATCAGTCAAGCCCTGCATCGACCA...ATGCTCACTCCCTATGGATGCAGTATGTATAGTGGGGCTTGAGCCCCCTGGGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
||
| CDS CCA 90 bp | CAGATGCTTTCAAAGGACCATTTGTTCAGCTCGCTGTACAAGTCTTaGATGCGGCCTCTCTCATCACGCAGCTCATCGATTTGCCCCATA | + |
|
Preference number: 5 (lower is better) Translates to: QMLSKDHLFSSLYKS*MRPLSSRSSSICPI Trigger: TATGGGGCAAATCGATGAGCTGCGTGATGAGAGAGGCCGCATCCAAGACTTGTACAGCGAGCTGAACAAATGGTCCTTTGAAAGCATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
||
| CDS TCA 90 bp | TTGATGGCCGCAATGAAGGTCAGGGCTTCTTCCTCTGTGTCCTTTTaGAGGAGCCCGAATCTCTTCTCATATAACACAAGGCAGATGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LMAAMKVRASSSVSF*RSPNLFSYNTRQML Trigger: AAGCATCTGCCTTGTGTTATATGAGAAGAGATTCGGGCTCCTTCAAAAGGACACAGAGGAAGAAGCCCTGACCTTCATTGCGGCCATCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
||
| CDS-3UTR CAA 90 bp | TGTCACAGAAGATGGAGTGACATCAGGCTCTTGAGGGCTCTGATTGGCTATTGTACGCAGCTCATCGATTaGCCCCATAAAATCAGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: CHRRWSDIRLLRALIGYCTQLID*PHKISQ Trigger: TTGGCTGATTTTATGGGGCAAATCGATGAGCTGCGT...ACAATAGCCAATCAGAGCCCTCAAGAGCCTGATGTCACTCCATCTTCTGTGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
||
| CDS-3UTR CAA 90 bp | TGCGTTTATGAAATTGTGCTTACCCAGGGGGCTCAAGCCCCACTATACATACTGTCAGCATCTTCAAAATaGTCTTCGCTAGAGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CVYEIVLTQGAQAPLYILSASSK*SSLEPS Trigger: GCTGGGCTCTAGCGAAGACAATTTTGAAGATGCTGA...CAGTATGTATAGTGGGGCTTGAGCCCCCTGGGTAAGCACAATTTCATAAACGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS CCA 90 bp | AGCATCTCCACAGGTTCACTGTCTGTAGCCACAATGTTATATTTTTaGATTATCCAGCAAAGAGCCAAGTGGAGCTGTAGCTCAGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SISTGSLSVATMLYF*IIQQRAKWSCSSAS Trigger: GCTGGCTGAGCTACAGCTCCACTTGGCTCTTTGCTGGATAATCCAAAAATATAACATTGTGGCTACAGACAGTGAACCTGTGGAGATGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS-3UTR CAA 90 bp | GTGCACACTCTAAAGCCGCAGAGAAAGGTACCAACGAAAGAAGAAATGACAGAGTTCCTCTGTGTCCTTTaGAAGGAGCCCGAATCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VHTLKPQRKVPTKEEMTEFLCVL*KEPESL Trigger: AAGAGATTCGGGCTCCTTCAAAAGGACACAGAGGAA...CTCTGTCATTTCTTCTTTCGTTGGTACCTTTCTCTGCGGCTTTAGAGTGTGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS CCA 90 bp | AACTTGTCAGCATCTTCAAAATTGTCTTCGCTAGAGCCCAGCACTTaGGTATTTAGTGTTAAGACTGTTCCTTTGGGTAGCGTGTATTCA | + |
|
Preference number: 5 (lower is better) Translates to: NLSASSKLSSLEPST*VFSVKTVPLGSVYS Trigger: TGAATACACGCTACCCAAAGGAACAGTCTTAACACTAAATACCCAAGTGCTGGGCTCTAGCGAAGACAATTTTGAAGATGCTGACAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS CAA 72 bp | GCGCACGCTTCACGTGCGCCTTGGATGTCACGGACCTaGGGGGTTGCCCGAGGTCCCGCAGCCGGCGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: AHASRAPWMSRT*GVARGPAAGAG Trigger: TCCTGCGCCGGCTGCGGGACCTCGGGCAACCCCCAAGGTCCGTGACATCCAAGGCGCACGTGAAGCGTGCGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
||
| CDS TCA 72 bp | CCAGCAGTGGCCAGTTGGTGGGTCCAGGTAAGGAGGTaGCGTTCCGAGTCTCACCGTCGGTCATCAGCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PAVASWWVQVRR*RSESHRRSSAG Trigger: GCCCGCTGATGACCGACGGTGAGACTCGGAACGTCACCTCCTTACCTGGACCCACCAACTGGCCACTGCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS GCA 72 bp | CGGTACAGAGCTTCCAGCAGGCTCGGCGAGCCCAGATaGACCGAGTCGAAGGAGCCCAGCTTCATCCGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: RYRASSRLGEPR*TESKEPSFIRK Trigger: TTTCCGGATGAAGCTGGGCTCCTTCGACTCGGTGCATCTGGGCTCGCCGAGCCTGCTGGAAGCTCTGTACCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS GCA 72 bp | CCAAGTGGAGCTGTAGCTCAGCCAGCCGGCGCCCGATaGACATCCTCTTCCCGACGCCAAATGGGAGATGAG | + |
|
Preference number: 6 (lower is better) Translates to: PSGAVAQPAGAR*TSSSRRQMGDE Trigger: CTCATCTCCCATTTGGCGTCGGGAAGAGGATGTGCATCGGGCGCCGGCTGGCTGAGCTACAGCTCCACTTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
||
| CDS CCA 72 bp | TCCGCCCGTGGCGTCTGGTTGTCAGGCAGCACGCTCTaGATTTCCCGGAGAAGTCTCTGTTGCACTTGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SARGVWLSGSTL*ISRRSLCCTWG Trigger: TCCCCAAGTGCAACAGAGACTTCTCCGGGAAATCCAGAGCGTGCTGCCTGACAACCAGACGCCACGGGCGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS CAA 90 bp | TCCCAGGCCAGCGTGTGCGCTTGCCACACTTTGGTGTTGAGGCGCTaGTGCAGCTCCACGGGGGTCACCATCATCTTCCCAAATGTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SQASVCACHTLVLRR*CSSTGVTIIFPNVL Trigger: GAGCACATTTGGGAAGATGATGGTGACCCCCGTGGAGCTGCACAAGCGCCTCAACACCAAAGTGTGGCAAGCGCACACGCTGGCCTGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS CAA 72 bp | AGCGTGTGCGCTTGCCACACTTTGGTGTTGAGGCGCTaGTGCAGCTCCACGGGGGTCACCATCATCTTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SVCACHTLVLRR*CSSTGVTIIFP Trigger: TGGGAAGATGATGGTGACCCCCGTGGAGCTGCACAAGCGCCTCAACACCAAAGTGTGGCAAGCGCACACGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
||
| CDS CAA 90 bp | AAAATGGTGTCCCAGGCCAGCGTGTGCGCTTGCCACACTTTGGTGTaGAGGCGCTTGTGCAGCTCCACGGGGGTCACCATCATCTTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: KMVSQASVCACHTLV*RRLCSSTGVTIIFP Trigger: TGGGAAGATGATGGTGACCCCCGTGGAGCTGCACAAGCGCCTCAACACCAAAGTGTGGCAAGCGCACACGCTGGCCTGGGACACCATTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
||
| CDS CAA 90 bp | CCAGGCTGCTGGGAATATCTCTCTAGGCGGTGGTCGATGCAGGGCTaGACTGATTTGAAAATGGTGTCCCAGGCCAGCGTGTGCGCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: PGCWEYLSRRWSMQG*TDLKMVSQASVCAC Trigger: GCAAGCGCACACGCTGGCCTGGGACACCATTTTCAAATCAGTCAAGCCCTGCATCGACCACCGCCTAGAGAGATATTCCCAGCAGCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
||
| CDS CAA 72 bp | CTCTCTAGGCGGTGGTCGATGCAGGGCTTGACTGATTaGAAAATGGTGTCCCAGGCCAGCGTGTGCGCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: LSRRWSMQGLTD*KMVSQASVCAC Trigger: GCAAGCGCACACGCTGGCCTGGGACACCATTTTCAAATCAGTCAAGCCCTGCATCGACCACCGCCTAGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
||
| CDS CAA 72 bp | GGCATATTCCTCACATCTTCCGCCCGTGGCGTCTGGTaGTCAGGCAGCACGCTCTGGATTTCCCGGAGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: GIFLTSSARGVW*SGSTLWISRRS Trigger: ACTTCTCCGGGAAATCCAGAGCGTGCTGCCTGACAACCAGACGCCACGGGCGGAAGATGTGAGGAATATGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
||
| CDS GCA 72 bp | GTGTGCGCTTGCCACACTTTGGTGTTGAGGCGCTTGTaGAGCTCCACGGGGGTCACCATCATCTTCCCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: VCACHTLVLRRL*SSTGVTIIFPN Trigger: ATTTGGGAAGATGATGGTGACCCCCGTGGAGCTGCACAAGCGCCTCAACACCAAAGTGTGGCAAGCGCACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
||
| CDS GCA 72 bp | GATTTGAAAATGGTGTCCCAGGCCAGCGTGTGCGCTTaGCACACTTTGGTGTTGAGGCGCTTGTGCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: DLKMVSQASVCA*HTLVLRRLCSS Trigger: GGAGCTGCACAAGCGCCTCAACACCAAAGTGTGGCAAGCGCACACGCTGGCCTGGGACACCATTTTCAAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
||
| CDS CAA 72 bp | CAGCTTCATGATTTCCACGGGCTTCATGAGTTTCTTTaGGAAGGCGCTGCGGACCCGCTGCCACTCCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: QLHDFHGLHEFL*EGAADPLPLLS Trigger: GGACAGGAGTGGCAGCGGGTCCGCAGCGCCTTCCAAAAGAAACTCATGAAGCCCGTGGAAATCATGAAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
||
| CDS CCA 72 bp | AGCTTCATGATTTCCACGGGCTTCATGAGTTTCTTTTaGAAGGCGCTGCGGACCCGCTGCCACTCCTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SFMISTGFMSFF*KALRTRCHSCP Trigger: AGGACAGGAGTGGCAGCGGGTCCGCAGCGCCTTCCAAAAGAAACTCATGAAGCCCGTGGAAATCATGAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
||
| CDS CCA 72 bp | ATCAAGCTGTTTGCGGTCGTCTCCACTGCAGCCAGCTaGAGCTCCGTGACAGCAGCGTACAGTTCTTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: IKLFAVVSTAAS*SSVTAAYSSFL Trigger: CAAGAAAGAACTGTACGCTGCTGTCACGGAGCTCCAGCTGGCTGCAGTGGAGACGACCGCAAACAGCTTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
||
| CDS CAA 90 bp | TGGGAATATCTCTCTAGGCGGTGGTCGATGCAGGGCTTGACTGATTaGAAAATGGTGTCCCAGGCCAGCGTGTGCGCTTGCCACACTTTG | + |
|
Preference number: 6 (lower is better) Translates to: WEYLSRRWSMQGLTD*KMVSQASVCACHTL Trigger: CAAAGTGTGGCAAGCGCACACGCTGGCCTGGGACACCATTTTCAAATCAGTCAAGCCCTGCATCGACCACCGCCTAGAGAGATATTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
||
| CDS GCA 72 bp | TTGACTGATTTGAAAATGGTGTCCCAGGCCAGCGTGTaGGCTTGCCACACTTTGGTGTTGAGGCGCTTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LTDLKMVSQASV*ACHTLVLRRLC Trigger: GCACAAGCGCCTCAACACCAAAGTGTGGCAAGCGCACACGCTGGCCTGGGACACCATTTTCAAATCAGTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
||
| CDS CCA 72 bp | ACCGAGTCGAAGGAGCCCAGCTTCATCCGGAAAATCTaGCCATACTTCTTGTGGTACTCTGCCAGTGTGTCG | + |
|
Preference number: 6 (lower is better) Translates to: TESKEPSFIRKI*PYFLWYSASVS Trigger: CGACACACTGGCAGAGTACCACAAGAAGTATGGCCAGATTTTCCGGATGAAGCTGGGCTCCTTCGACTCGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
||
| CDS CAA 72 bp | TGGGAATATCTCTCTAGGCGGTGGTCGATGCAGGGCTaGACTGATTTGAAAATGGTGTCCCAGGCCAGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: WEYLSRRWSMQG*TDLKMVSQASV Trigger: CACGCTGGCCTGGGACACCATTTTCAAATCAGTCAAGCCCTGCATCGACCACCGCCTAGAGAGATATTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
||
| CDS CAA 72 bp | CCTTTGGGTAGCGTGTATTCACCCAGAACGGTTGGCTaGTCAAGGGTCCGAGTTGTGAATGGCACACTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: PLGSVYSPRTVG*SRVRVVNGTLG Trigger: CCCAAGTGTGCCATTCACAACTCGGACCCTTGACAAGCCAACCGTTCTGGGTGAATACACGCTACCCAAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
||
| CDS CAA 90 bp | TTTCTTGTCCAGCTTCATGATTTCCACGGGCTTCATGAGTTTCTTTaGGAAGGCGCTGCGGACCCGCTGCCACTCCTGTCCTTCCAGGAT | + |
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Preference number: 6 (lower is better) Translates to: FLVQLHDFHGLHEFL*EGAADPLPLLSFQD Trigger: ATCCTGGAAGGACAGGAGTGGCAGCGGGTCCGCAGCGCCTTCCAAAAGAAACTCATGAAGCCCGTGGAAATCATGAAGCTGGACAAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS GCA 72 bp | AGGACCATTTGTTCAGCTCGCTGTACAAGTCTTGGATaGGGCCTCTCTCATCACGCAGCTCATCGATTTGCC | + |
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Preference number: 6 (lower is better) Translates to: RTICSARCTSLG*GLSHHAAHRFA Trigger: GGCAAATCGATGAGCTGCGTGATGAGAGAGGCCGCATCCAAGACTTGTACAGCGAGCTGAACAAATGGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS CAA 90 bp | AAGACTGTTCCTTTGGGTAGCGTGTATTCACCCAGAACGGTTGGCTaGTCAAGGGTCCGAGTTGTGAATGGCACACTTGGGGTAAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: KTVPLGSVYSPRTVG*SRVRVVNGTLGVSL Trigger: GAGGCTTACCCCAAGTGTGCCATTCACAACTCGGACCCTTGACAAGCCAACCGTTCTGGGTGAATACACGCTACCCAAAGGAACAGTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS CAA 90 bp | GCAGATGCTTTCAAAGGACCATTTGTTCAGCTCGCTGTACAAGTCTaGGATGCGGCCTCTCTCATCACGCAGCTCATCGATTTGCCCCAT | + |
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Preference number: 6 (lower is better) Translates to: ADAFKGPFVQLAVQV*DAASLITQLIDLPH Trigger: ATGGGGCAAATCGATGAGCTGCGTGATGAGAGAGGCCGCATCCAAGACTTGTACAGCGAGCTGAACAAATGGTCCTTTGAAAGCATCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS CCA 72 bp | CCCAGCTTCATCCGGAAAATCTGGCCATACTTCTTGTaGTACTCTGCCAGTGTGTCGTGCTGTTTCTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: PSFIRKIWPYFL*YSASVSCCFFR Trigger: CCTGAAGAAACAGCACGACACACTGGCAGAGTACCACAAGAAGTATGGCCAGATTTTCCGGATGAAGCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS CCA 72 bp | ATGTTATATTTTTGGATTATCCAGCAAAGAGCCAAGTaGAGCTGTAGCTCAGCCAGCCGGCGCCCGATGCAC | + |
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Preference number: 6 (lower is better) Translates to: MLYFWIIQQRAK*SCSSASRRPMH Trigger: GTGCATCGGGCGCCGGCTGGCTGAGCTACAGCTCCACTTGGCTCTTTGCTGGATAATCCAAAAATATAACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS CAA 72 bp | GAGCCCAGCTTCATCCGGAAAATCTGGCCATACTTCTaGTGGTACTCTGCCAGTGTGTCGTGCTGTTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: EPSFIRKIWPYF*WYSASVSCCFF Trigger: GAAGAAACAGCACGACACACTGGCAGAGTACCACAAGAAGTATGGCCAGATTTTCCGGATGAAGCTGGGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS CAA 90 bp | TCCACGGGGGTCACCATCATCTTCCCAAATGTGCTCATCATTGTTTaGATGGCCGCAATGAAGGTCAGGGCTTCTTCCTCTGTGTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: STGVTIIFPNVLIIV*MAAMKVRASSSVSF Trigger: AAAGGACACAGAGGAAGAAGCCCTGACCTTCATTGCGGCCATCAAAACAATGATGAGCACATTTGGGAAGATGATGGTGACCCCCGTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS CAA 90 bp | TCGCTAGAGCCCAGCACTTGGGTATTTAGTGTTAAGACTGTTCCTTaGGGTAGCGTGTATTCACCCAGAACGGTTGGCTTGTCAAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: SLEPSTWVFSVKTVP*GSVYSPRTVGLSRV Trigger: GACCCTTGACAAGCCAACCGTTCTGGGTGAATACACGCTACCCAAAGGAACAGTCTTAACACTAAATACCCAAGTGCTGGGCTCTAGCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS CCA 72 bp | TCAAAGGACCATTTGTTCAGCTCGCTGTACAAGTCTTaGATGCGGCCTCTCTCATCACGCAGCTCATCGATT | + |
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Preference number: 6 (lower is better) Translates to: SKDHLFSSLYKS*MRPLSSRSSSI Trigger: AATCGATGAGCTGCGTGATGAGAGAGGCCGCATCCAAGACTTGTACAGCGAGCTGAACAAATGGTCCTTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS CAA 72 bp | TTCAAAGGACCATTTGTTCAGCTCGCTGTACAAGTCTaGGATGCGGCCTCTCTCATCACGCAGCTCATCGAT | + |
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Preference number: 6 (lower is better) Translates to: FKGPFVQLAVQV*DAASLITQLID Trigger: ATCGATGAGCTGCGTGATGAGAGAGGCCGCATCCAAGACTTGTACAGCGAGCTGAACAAATGGTCCTTTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS GCA 72 bp | TGGATGCGGCCTCTCTCATCACGCAGCTCATCGATTTaGCCCATAAAATCAGCCAAGACCTCATTGATTTTC | + |
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Preference number: 6 (lower is better) Translates to: WMRPLSSRSSSI*PIKSAKTSLIF Trigger: GAAAATCAATGAGGTCTTGGCTGATTTTATGGGGCAAATCGATGAGCTGCGTGATGAGAGAGGCCGCATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS CAA 72 bp | TTGGATGCGGCCTCTCTCATCACGCAGCTCATCGATTaGCCCCATAAAATCAGCCAAGACCTCATTGATTTT | + |
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Preference number: 6 (lower is better) Translates to: LDAASLITQLID*PHKISQDLIDF Trigger: AAAATCAATGAGGTCTTGGCTGATTTTATGGGGCAAATCGATGAGCTGCGTGATGAGAGAGGCCGCATCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS CAA 72 bp | GTCACCATCATCTTCCCAAATGTGCTCATCATTGTTTaGATGGCCGCAATGAAGGTCAGGGCTTCTTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: VTIIFPNVLIIV*MAAMKVRASSS Trigger: AGAGGAAGAAGCCCTGACCTTCATTGCGGCCATCAAAACAATGATGAGCACATTTGGGAAGATGATGGTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS CAA 72 bp | TCATATAACACAAGGCAGATGCTTTCAAAGGACCATTaGTTCAGCTCGCTGTACAAGTCTTGGATGCGGCCT | + |
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Preference number: 6 (lower is better) Translates to: SYNTRQMLSKDH*FSSLYKSWMRP Trigger: AGGCCGCATCCAAGACTTGTACAGCGAGCTGAACAAATGGTCCTTTGAAAGCATCTGCCTTGTGTTATATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS CAA 72 bp | CAGCGTTCGGGTCTAAACTTGTCAGCATCTTCAAAATaGTCTTCGCTAGAGCCCAGCACTTGGGTATTTAGT | + |
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Preference number: 6 (lower is better) Translates to: QRSGLNLSASSK*SSLEPSTWVFS Trigger: ACTAAATACCCAAGTGCTGGGCTCTAGCGAAGACAATTTTGAAGATGCTGACAAGTTTAGACCCGAACGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS CCA 72 bp | GCATCTTCAAAATTGTCTTCGCTAGAGCCCAGCACTTaGGTATTTAGTGTTAAGACTGTTCCTTTGGGTAGC | + |
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Preference number: 6 (lower is better) Translates to: ASSKLSSLEPST*VFSVKTVPLGS Trigger: GCTACCCAAAGGAACAGTCTTAACACTAAATACCCAAGTGCTGGGCTCTAGCGAAGACAATTTTGAAGATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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| CDS CAA 90 bp | TTTTCAAGCCAGCGTTCGGGTCTAAACTTGTCAGCATCTTCAAAATaGTCTTCGCTAGAGCCCAGCACTTGGGTATTTAGTGTTAAGACT | + |
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Preference number: 6 (lower is better) Translates to: FSSQRSGLNLSASSK*SSLEPSTWVFSVKT Trigger: AGTCTTAACACTAAATACCCAAGTGCTGGGCTCTAGCGAAGACAATTTTGAAGATGCTGACAAGTTTAGACCCGAACGCTGGCTTGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038824.6 |
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