Pregenerated sensors for CYP21A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024365Ensembl transcript IDs: ENSMUST00000025223.9
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCAGAAGGCACCAGCTCAGGGATCATGGGAGAGATAGCTGGACCCTaGGAGTCACCTACAGGAGCAGGGTGGGGCTGGATTAGGTGGCAT | + |
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Preference number: 1 (lower is better) Translates to: AEGTSSGIMGEIAGP*ESPTGAGWGWIRWH Trigger: ATGCCACCTAATCCAGCCCCACCCTGCTCCTGTAGGTGACTCCCAGGGTCCAGCTATCTCTCCCATGATCCCTGAGCTGGTGCCTTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| 3UTR CCA 72 bp | AGAAGGCACCAGCTCAGGGATCATGGGAGAGATAGCTaGACCCTGGGAGTCACCTACAGGAGCAGGGTGGGG | + |
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Preference number: 3 (lower is better) Translates to: RRHQLRDHGRDS*TLGVTYRSRVG Trigger: CCCCACCCTGCTCCTGTAGGTGACTCCCAGGGTCCAGCTATCTCTCCCATGATCCCTGAGCTGGTGCCTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| 3UTR CCA 72 bp | ACCAGCTCAGGGATCATGGGAGAGATAGCTGGACCCTaGGAGTCACCTACAGGAGCAGGGTGGGGCTGGATT | + |
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Preference number: 3 (lower is better) Translates to: TSSGIMGEIAGP*ESPTGAGWGWI Trigger: AATCCAGCCCCACCCTGCTCCTGTAGGTGACTCCCAGGGTCCAGCTATCTCTCCCATGATCCCTGAGCTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| 3UTR-3UTR CAA 90 bp | AGGCACCAGCTCAGGGATCATGGGAGAGATAGCTGGACCCTGGGAGTCACCTACCTTGACTCTCTTCCCTaGACAACCCTCTCCTCAGGG | + |
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Preference number: 3 (lower is better) Translates to: RHQLRDHGRDSWTLGVTYLDSLP*TTLSSG Trigger: CCCTGAGGAGAGGGTTGTCAAGGGAAGAGAGTCAAG...GTAGGTGACTCCCAGGGTCCAGCTATCTCTCCCATGATCCCTGAGCTGGTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| 3UTR TCA 72 bp | GGGGCTGGATTAGGTGGCATTGATATGGCGCTGTCTTaGCTCTCTTCCCTTGACAACCCTCTCCTCAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: GAGLGGIDMALS*LSSLDNPLLRE Trigger: CTCCCTGAGGAGAGGGTTGTCAAGGGAAGAGAGTCAAGACAGCGCCATATCAATGCCACCTAATCCAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS-3UTR TCA 90 bp | CTTCCAGGCCCCCACCAGGGGCACCTGAGCCTGCTGCCTACCTCACTCACACCCGCCCAGCATCAGGGCTaGGCGAGAGAGTTTCTTGTG | + |
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Preference number: 4 (lower is better) Translates to: LPGPHQGHLSLLPTSLTPAQHQG*AREFLV Trigger: CACAAGAAACTCTCTCGCTCAGCCCTGATGCTGGGC...GGGTGTGAGTGAGGTAGGCAGCAGGCTCAGGTGCCCCTGGTGGGGGCCTGGAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS-3UTR CCA 90 bp | AATGAAGCTCCGACCCAGAAACTTCCAGGCCCCCACCAGGGGCACCTGAGCCTGTTCCTGTACAGGAGCTaGGAGCCTGGGCCCAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: NEAPTQKLPGPHQGHLSLFLYRS*EPGPSL Trigger: CAAGCTGGGCCCAGGCTCCCAGCTCCTGTACAGGAA...CAGGCTCAGGTGCCCCTGGTGGGGGCCTGGAAGTTTCTGGGTCGGAGCTTCATT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS-3UTR TCA 90 bp | GGAGAGATAGCTGGACCCTGGGAGTCACCTACAGGAGCAGGGTGGGGCTGGATTCGGCAATGGTGGCCATaGGCAGAGGCAGCTGCATTC | + |
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Preference number: 4 (lower is better) Translates to: GEIAGPWESPTGAGWGWIRQWWP*AEAAAF Trigger: GAATGCAGCTGCCTCTGCTCATGGCCACCATTGCCG...AATCCAGCCCCACCCTGCTCCTGTAGGTGACTCCCAGGGTCCAGCTATCTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS-3UTR TCA 90 bp | GGAGAGATAGCTGGACCCTGGGAGTCACCTACAGGAGCAGGGTGGGGCTGGATTTGGATCTCAGGGTGGTaGAGCAGGAAAGCCACAGCC | + |
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Preference number: 4 (lower is better) Translates to: GEIAGPWESPTGAGWGWIWISGW*SRKATA Trigger: GGCTGTGGCTTTCCTGCTTCACCACCCTGAGATCCA...AATCCAGCCCCACCCTGCTCCTGTAGGTGACTCCCAGGGTCCAGCTATCTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS-3UTR GCA 90 bp | AGCTCAGGGATCATGGGAGAGATAGCTGGACCCTGGGAGTCACCTACAGGAGCACAGCCTGGGCTCGCATaGGCTCACAGAACTCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: SSGIMGEIAGPWESPTGAQPGLA*AHRTPG Trigger: CCCAGGAGTTCTGTGAGCGCATGCGAGCCCAGGCTG...TGCTCCTGTAGGTGACTCCCAGGGTCCAGCTATCTCTCCCATGATCCCTGAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS-3UTR GCA 90 bp | GTGGCATTGATATGGCGCTGTCTTGACTCTCTTCCCTTGACAACCCTCTCCTCAGGATGGCCACGGGGGTaGCAGCCTGGGCTCGCATGC | + |
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Preference number: 4 (lower is better) Translates to: VALIWRCLDSLPLTTLSSGWPRG*QPGLAC Trigger: GCATGCGAGCCCAGGCTGGCACCCCCGTGGCCATCC...TGAGGAGAGGGTTGTCAAGGGAAGAGAGTCAAGACAGCGCCATATCAATGCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS-3UTR CCA 90 bp | CTCAGGGATCATGGGAGAGATAGCTGGACCCTGGGAGTCACCTACAGGAGCAGGGGCTGCAGCCGCACCTaGAAAGGAGGAATCGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: LRDHGRDSWTLGVTYRSRGCSRT*KGGIGR Trigger: TCTCCCGATTCCTCCTTTCCAGGTGCGGCTGCAGCC...CCTGCTCCTGTAGGTGACTCCCAGGGTCCAGCTATCTCTCCCATGATCCCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS-3UTR TCA 90 bp | GAAGGCACCAGCTCAGGGATCATGGGAGAGATAGCTGGACCCTGGGAGTCACCTGCCCGAGTTTCTGAGTaGGGCCAAGCAGGTAGATGG | + |
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Preference number: 4 (lower is better) Translates to: EGTSSGIMGEIAGPWESPARVSE*GQAGRW Trigger: CCATCTACCTGCTTGGCCTCACTCAGAAACTCGGGC...AGGTGACTCCCAGGGTCCAGCTATCTCTCCCATGATCCCTGAGCTGGTGCCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS-3UTR TCA 90 bp | ACCCCAGTAGAGAAGAGCCACCGTGCCTCACCGAGGAAGCCTTCTCTGCCACAAAGCCTGGGCCCAGCTTaGGGTCTAACTCTTCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: TPVEKSHRASPRKPSLPQSLGPA*GLTLPA Trigger: TGCAGGAAGAGTTAGACCTCAAGCTGGGCCCAGGCT...TTGTGGCAGAGAAGGCTTCCTCGGTGAGGCACGGTGGCTCTTCTCTACTGGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS-3UTR GCA 90 bp | GCCTGCTGCCTACCTCACTCACACCCCAGTAGAGAAGAGCCACCGTGCCTCACCTTAGGCTGTAGGAAGTaGAGAAAACCCGGGGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: ACCLPHSHPSREEPPCLTLGCRK*RKPGAR Trigger: TCTGGCCCCGGGTTTTCTGCACTTCCTACAGCCTAA...GGTGAGGCACGGTGGCTCTTCTCTACTGGGGTGTGAGTGAGGTAGGCAGCAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS-3UTR CCA 90 bp | AGCTCAGGGATCATGGGAGAGATAGCTGGACCCTGGGAGTCACCTACAGGAGCACAGCTTCTGGAGGCCTaGGTTGGGGAGGAACCTGAG | + |
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Preference number: 4 (lower is better) Translates to: SSGIMGEIAGPWESPTGAQLLEA*VGEEPE Trigger: CTCAGGTTCCTCCCCAACCCAGGCCTCCAGAAGCTG...TGCTCCTGTAGGTGACTCCCAGGGTCCAGCTATCTCTCCCATGATCCCTGAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS-3UTR CCA 90 bp | AGGCACCAGCTCAGGGATCATGGGAGAGATAGCTGGACCCTGGGAGTCACCTACATCTGCTTCAGCTTCTaGAGGCCTGGGTTGGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: RHQLRDHGRDSWTLGVTYICFSF*RPGLGR Trigger: CCTCCCCAACCCAGGCCTCCAGAAGCTGAAGCAGAT...GTAGGTGACTCCCAGGGTCCAGCTATCTCTCCCATGATCCCTGAGCTGGTGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS-3UTR CCA 90 bp | CATGGGAGAGATAGCTGGACCCTGGGAGTCACCTACAGGAGCAGGGTGGGGCTGCCCACAGCCAAAGGATaGTGTTCTGGGATTCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: HGRDSWTLGVTYRSRVGLPTAKG*CSGILP Trigger: GGGAAGAATCCCAGAACACCATCCTTTGGCTGTGGG...CAGCCCCACCCTGCTCCTGTAGGTGACTCCCAGGGTCCAGCTATCTCTCCCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS-3UTR GCA 90 bp | TGGGCAGAAGGCACCAGCTCAGGGATCATGGGAGAGATAGCTGGACCCTGGGAGCAGTGGTTCCAGGCTTaGAACAAGTCCTGGACACAG | + |
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Preference number: 4 (lower is better) Translates to: WAEGTSSGIMGEIAGPWEQWFQA*NKSWTQ Trigger: CTGTGTCCAGGACTTGTTGCAAGCCTGGAACCACTG...CTCCCAGGGTCCAGCTATCTCTCCCATGATCCCTGAGCTGGTGCCTTCTGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS-3UTR GCA 90 bp | AGCTCAGGGATCATGGGAGAGATAGCTGGACCCTGGGAGTCACCTACAGGAGCAAGCACCACCACATCTTaGATCCCCAAGCGGATCCTG | + |
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Preference number: 4 (lower is better) Translates to: SSGIMGEIAGPWESPTGASTTTS*IPKRIL Trigger: CAGGATCCGCTTGGGGATGCAAGATGTGGTGGTGCT...TGCTCCTGTAGGTGACTCCCAGGGTCCAGCTATCTCTCCCATGATCCCTGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS-3UTR GCA 90 bp | CTCAGGGATCATGGGAGAGATAGCTGGACCCTGGGAGTCACCTACAGGAGCAGGTGCCGCTTCAGCTGCTaGTTGACAATATGGTCCCGA | + |
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Preference number: 4 (lower is better) Translates to: LRDHGRDSWTLGVTYRSRCRFSC*LTIWSR Trigger: TCGGGACCATATTGTCAAGCAGCAGCTGAAGCGGCA...CCTGCTCCTGTAGGTGACTCCCAGGGTCCAGCTATCTCTCCCATGATCCCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS-3UTR GCA 90 bp | ACCCCAGTAGAGAAGAGCCACCGTGCCTCACCGAGGAAGCCTTCTCTGCCACAAGATCTGGCCAGAACTTaGTGGGCAGTTCCCAAACCA | + |
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Preference number: 4 (lower is better) Translates to: TPVEKSHRASPRKPSLPQDLART*WAVPKP Trigger: TGGTTTGGGAACTGCCCAGCAAGTTCTGGCCAGATC...TTGTGGCAGAGAAGGCTTCCTCGGTGAGGCACGGTGGCTCTTCTCTACTGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS-3UTR CCA 90 bp | CATGGGAGAGATAGCTGGACCCTGGGAGTCACCTACAGGAGCAGGGTGGGGCTGCAAAGGATGGTGTTCTaGGATTCTTCCCAGGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: HGRDSWTLGVTYRSRVGLQRMVF*DSSQVP Trigger: TGGAACCTGGGAAGAATCCCAGAACACCATCCTTTG...CAGCCCCACCCTGCTCCTGTAGGTGACTCCCAGGGTCCAGCTATCTCTCCCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS-3UTR CCA 90 bp | TCTGAAGAGACCATTTATTACTGGGCAGAAGGCACCAGCTCAGGGATCATGGGAGCCCTAGTTGCACGATaGGGCAAGGCCAAGGGCACC | + |
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Preference number: 4 (lower is better) Translates to: SEETIYYWAEGTSSGIMGALVAR*GKAKGT Trigger: GGTGCCCTTGGCCTTGCCCCATCGTGCAACTAGGGC...TCCCATGATCCCTGAGCTGGTGCCTTCTGCCCAGTAATAAATGGTCTCTTCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS-3UTR CCA 90 bp | ATAGCTGGACCCTGGGAGTCACCTACAGGAGCAGGGTGGGGCTGGATTAGGTGGATTATCGTCAAGATTTaGATGGACCAGTGGTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: IAGPWESPTGAGWGWIRWIIVKI*MDQWFQ Trigger: CTGGAACCACTGGTCCATCCAAATCTTGACGATAAT...CCACCTAATCCAGCCCCACCCTGCTCCTGTAGGTGACTCCCAGGGTCCAGCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS-3UTR GCA 90 bp | AGGAAATCTGAAGAGACCATTTATTACTGGGCAGAAGGCACCAGCTCAGGGATCACCAGGCTGTCCTTGTaGCGCTTCAGCTGCTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: RKSEETIYYWAEGTSSGITRLSL*RFSCCL Trigger: CAAGCAGCAGCTGAAGCGGCACAAGGACAGCCTGGT...GATCCCTGAGCTGGTGCCTTCTGCCCAGTAATAAATGGTCTCTTCAGATTTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS-3UTR CCA 90 bp | AGGAAATCTGAAGAGACCATTTATTACTGGGCAGAAGGCACCAGCTCAGGGATCCAGGGTTCCATCTGGTaGAGGCAGCAGAGTGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: RKSEETIYYWAEGTSSGIQGSIW*RQQSEG Trigger: GCCTTCACTCTGCTGCCTCCACCAGATGGAACCCTG...GATCCCTGAGCTGGTGCCTTCTGCCCAGTAATAAATGGTCTCTTCAGATTTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS-3UTR GCA 90 bp | AGGAAATCTGAAGAGACCATTTATTACTGGGCAGAAGGCACCAGCTCAGGGATCGCCGCTCTTCGTCTTTaGCATCCCTTTGCTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: RKSEETIYYWAEGTSSGIAALRL*HPFASP Trigger: TGGAGAAGCAAAGGGATGGCAAAGACGAAGAGCGGC...GATCCCTGAGCTGGTGCCTTCTGCCCAGTAATAAATGGTCTCTTCAGATTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS-3UTR CCA 90 bp | GTGGCATTGATATGGCGCTGTCTTGACTCTCTTCCCTTGACAACCCTCTCCTCATGCTGCTTGACAATATaGTCCCGACTCTCTTGGATC | + |
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Preference number: 4 (lower is better) Translates to: VALIWRCLDSLPLTTLSSCCLTI*SRLSWI Trigger: GATCCAAGAGAGTCGGGACCATATTGTCAAGCAGCA...TGAGGAGAGGGTTGTCAAGGGAAGAGAGTCAAGACAGCGCCATATCAATGCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS-3UTR CCA 90 bp | TCTGAAGAGACCATTTATTACTGGGCAGAAGGCACCAGCTCAGGGATCATGGGAATCATGTCTTTCCATTaGCCTGCAACCAGGCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: SEETIYYWAEGTSSGIMGIMSFH*PATRLS Trigger: GGACAGCCTGGTTGCAGGCCAATGGAAAGACATGAT...TCCCATGATCCCTGAGCTGGTGCCTTCTGCCCAGTAATAAATGGTCTCTTCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS-3UTR CAA 90 bp | GCTGGACCCTGGGAGTCACCTACAGGAGCAGGGTGGGGCTGGATTAGGTGGCATCGCTTCAGCTGCTGCTaGACAATATGGTCCCGACTC | + |
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Preference number: 5 (lower is better) Translates to: AGPWESPTGAGWGWIRWHRFSCC*TIWSRL Trigger: GAGTCGGGACCATATTGTCAAGCAGCAGCTGAAGCG...ATGCCACCTAATCCAGCCCCACCCTGCTCCTGTAGGTGACTCCCAGGGTCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS TCA 90 bp | GCTGCATTCGGTTCCTGTACAGGAGCTGGGAGCCTGGGCCCAGCTTaGGGTCTAACTCTTCCTGCAGTCGCTTCTGGATCTCAGGGTGGT | + |
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Preference number: 5 (lower is better) Translates to: AAFGSCTGAGSLGPA*GLTLPAVASGSQGG Trigger: ACCACCCTGAGATCCAGAAGCGACTGCAGGAAGAGTTAGACCTCAAGCTGGGCCCAGGCTCCCAGCTCCTGTACAGGAACCGAATGCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS-3UTR CAA 90 bp | CATGGGAGAGATAGCTGGACCCTGGGAGTCACCTACAGGAGCAGGGTGGGGCTGATGGTCCCGACTCTCTaGGATCTGCTTCAGCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: HGRDSWTLGVTYRSRVGLMVPTL*DLLQLL Trigger: CAGAAGCTGAAGCAGATCCAAGAGAGTCGGGACCAT...CAGCCCCACCCTGCTCCTGTAGGTGACTCCCAGGGTCCAGCTATCTCTCCCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS GCA 90 bp | CCACCGACATGTGCACGTGCCCCTCGTGGAGCCGCTCTTCGTCTTTaGCATCCCTTTGCTTCTCCACTCCCTGGAGCATGTAGTCAATCA | + |
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Preference number: 5 (lower is better) Translates to: PPTCARAPRGAALRL*HPFASPLPGACSQS Trigger: TGATTGACTACATGCTCCAGGGAGTGGAGAAGCAAAGGGATGGCAAAGACGAAGAGCGGCTCCACGAGGGGCACGTGCACATGTCGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS-3UTR CAA 90 bp | AATGAAGCTCCGACCCAGAAACTTCCAGGCCCCCACCAGGGGCACCTGAGCCTGAATCATGTCTTTCCATaGGCCTGCAACCAGGCTGTC | + |
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Preference number: 5 (lower is better) Translates to: NEAPTQKLPGPHQGHLSLNHVFP*ACNQAV Trigger: GACAGCCTGGTTGCAGGCCAATGGAAAGACATGATT...CAGGCTCAGGTGCCCCTGGTGGGGGCCTGGAAGTTTCTGGGTCGGAGCTTCATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS GCA 90 bp | CGCTTCAGCTGCTGCTTGACAATATGGTCCCGACTCTCTTGGATCTaGTTCAGCTTCTGGAGGCCTGGGTTGGGGAGGAACCTGAGAAGG | + |
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Preference number: 5 (lower is better) Translates to: RFSCCLTIWSRLSWI*FSFWRPGLGRNLRR Trigger: CCTTCTCAGGTTCCTCCCCAACCCAGGCCTCCAGAAGCTGAAGCAGATCCAAGAGAGTCGGGACCATATTGTCAAGCAGCAGCTGAAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS CCA 90 bp | TTGTGCCGCTTCAGCTGCTGCTTGACAATATGGTCCCGACTCTCTTaGATCTGCTTCAGCTTCTGGAGGCCTGGGTTGGGGAGGAACCTG | + |
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Preference number: 5 (lower is better) Translates to: LCRFSCCLTIWSRLS*ICFSFWRPGLGRNL Trigger: CAGGTTCCTCCCCAACCCAGGCCTCCAGAAGCTGAAGCAGATCCAAGAGAGTCGGGACCATATTGTCAAGCAGCAGCTGAAGCGGCACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS-3UTR CAA 90 bp | GGAGAGATAGCTGGACCCTGGGAGTCACCTACAGGAGCAGGGTGGGGCTGGATTAAAGTCCACCCACTTTaGGATCAAGGCCTCCTCAAT | + |
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Preference number: 5 (lower is better) Translates to: GEIAGPWESPTGAGWGWIKVHPL*DQGLLN Trigger: ATTGAGGAGGCCTTGATCCAAAAGTGGGTGGACTTT...AATCCAGCCCCACCCTGCTCCTGTAGGTGACTCCCAGGGTCCAGCTATCTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS TCA 90 bp | ATTGGCCTGCAACCAGGCTGTCCTTGTGCCGCTTCAGCTGCTGCTTaGCAATATGGTCCCGACTCTCTTGGATCTGCTTCAGCTTCTGGA | + |
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Preference number: 5 (lower is better) Translates to: IGLQPGCPCAASAAA*QYGPDSLGSASASG Trigger: TCCAGAAGCTGAAGCAGATCCAAGAGAGTCGGGACCATATTGTCAAGCAGCAGCTGAAGCGGCACAAGGACAGCCTGGTTGCAGGCCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS GCA 90 bp | TTCCATTGGCCTGCAACCAGGCTGTCCTTGTGCCGCTTCAGCTGCTaGTTGACAATATGGTCCCGACTCTCTTGGATCTGCTTCAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: FHWPATRLSLCRFSC*LTIWSRLSWICFSF Trigger: GAAGCTGAAGCAGATCCAAGAGAGTCGGGACCATATTGTCAAGCAGCAGCTGAAGCGGCACAAGGACAGCCTGGTTGCAGGCCAATGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS GCA 90 bp | TCTTTCCATTGGCCTGCAACCAGGCTGTCCTTGTGCCGCTTCAGCTaGTGCTTGACAATATGGTCCCGACTCTCTTGGATCTGCTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: SFHWPATRLSLCRFS*CLTIWSRLSWICFS Trigger: GCTGAAGCAGATCCAAGAGAGTCGGGACCATATTGTCAAGCAGCAGCTGAAGCGGCACAAGGACAGCCTGGTTGCAGGCCAATGGAAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS CCA 90 bp | TGCTTGACAATATGGTCCCGACTCTCTTGGATCTGCTTCAGCTTCTaGAGGCCTGGGTTGGGGAGGAACCTGAGAAGGGGAATTATCGTC | + |
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Preference number: 5 (lower is better) Translates to: CLTIWSRLSWICFSF*RPGLGRNLRRGIIV Trigger: GACGATAATTCCCCTTCTCAGGTTCCTCCCCAACCCAGGCCTCCAGAAGCTGAAGCAGATCCAAGAGAGTCGGGACCATATTGTCAAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS GCA 72 bp | CCGCCGATGAACAGGTCCACCACCGACATGTGCACGTaGCCCTCGTGGAGCCGCTCTTCGTCTTTGCCATCC | + |
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Preference number: 6 (lower is better) Translates to: PPMNRSTTDMCT*PSWSRSSSLPS Trigger: GGATGGCAAAGACGAAGAGCGGCTCCACGAGGGGCACGTGCACATGTCGGTGGTGGACCTGTTCATCGGCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS GCA 72 bp | TCGGTGCCGCCGATGAACAGGTCCACCACCGACATGTaGACGTGCCCCTCGTGGAGCCGCTCTTCGTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: SVPPMNRSTTDM*TCPSWSRSSSL Trigger: CAAAGACGAAGAGCGGCTCCACGAGGGGCACGTGCACATGTCGGTGGTGGACCTGTTCATCGGCGGCACCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS GCA 72 bp | CGCTCACCCTGGTCTTGGGGCGCCAGGTTTCTGGGCTaGAGCCGCACCTGGAAAGGAGGAATCGGGAGATTG | + |
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Preference number: 6 (lower is better) Translates to: RSPWSWGARFLG*SRTWKGGIGRL Trigger: CAATCTCCCGATTCCTCCTTTCCAGGTGCGGCTGCAGCCCAGAAACCTGGCGCCCCAAGACCAGGGTGAGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS CCA 72 bp | AAGGACGCTCACCCTGGTCTTGGGGCGCCAGGTTTCTaGGCTGCAGCCGCACCTGGAAAGGAGGAATCGGGA | + |
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Preference number: 6 (lower is better) Translates to: KDAHPGLGAPGF*AAAAPGKEESG Trigger: TCCCGATTCCTCCTTTCCAGGTGCGGCTGCAGCCCAGAAACCTGGCGCCCCAAGACCAGGGTGAGCGTCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS CCA 72 bp | GAGAATTCCTTATGGATGGCCACGGGGGTGCCAGCCTaGGCTCGCATGCGCTCACAGAACTCCTGGGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: ENSLWMATGVPA*ARMRSQNSWVS Trigger: GCTGACCCAGGAGTTCTGTGAGCGCATGCGAGCCCAGGCTGGCACCCCCGTGGCCATCCATAAGGAATTCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS GCA 72 bp | TGTGCACGTGCCCCTCGTGGAGCCGCTCTTCGTCTTTaGCATCCCTTTGCTTCTCCACTCCCTGGAGCATGT | + |
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Preference number: 6 (lower is better) Translates to: CARAPRGAALRL*HPFASPLPGAC Trigger: ACATGCTCCAGGGAGTGGAGAAGCAAAGGGATGGCAAAGACGAAGAGCGGCTCCACGAGGGGCACGTGCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS TCA 72 bp | GGTTCCTGTACAGGAGCTGGGAGCCTGGGCCCAGCTTaGGGTCTAACTCTTCCTGCAGTCGCTTCTGGATCT | + |
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Preference number: 6 (lower is better) Translates to: GSCTGAGSLGPA*GLTLPAVASGS Trigger: AGATCCAGAAGCGACTGCAGGAAGAGTTAGACCTCAAGCTGGGCCCAGGCTCCCAGCTCCTGTACAGGAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS CAA 90 bp | CTTGTGCCGCTTCAGCTGCTGCTTGACAATATGGTCCCGACTCTCTaGGATCTGCTTCAGCTTCTGGAGGCCTGGGTTGGGGAGGAACCT | + |
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Preference number: 6 (lower is better) Translates to: LVPLQLLLDNMVPTL*DLLQLLEAWVGEEP Trigger: AGGTTCCTCCCCAACCCAGGCCTCCAGAAGCTGAAGCAGATCCAAGAGAGTCGGGACCATATTGTCAAGCAGCAGCTGAAGCGGCACAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS GCA 72 bp | CCTGCAACCAGGCTGTCCTTGTGCCGCTTCAGCTGCTaGTTGACAATATGGTCCCGACTCTCTTGGATCTGC | + |
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Preference number: 6 (lower is better) Translates to: PATRLSLCRFSC*LTIWSRLSWIC Trigger: GCAGATCCAAGAGAGTCGGGACCATATTGTCAAGCAGCAGCTGAAGCGGCACAAGGACAGCCTGGTTGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS CAA 90 bp | CATTGGCCTGCAACCAGGCTGTCCTTGTGCCGCTTCAGCTGCTGCTaGACAATATGGTCCCGACTCTCTTGGATCTGCTTCAGCTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: HWPATRLSLCRFSCC*TIWSRLSWICFSFW Trigger: CCAGAAGCTGAAGCAGATCCAAGAGAGTCGGGACCATATTGTCAAGCAGCAGCTGAAGCGGCACAAGGACAGCCTGGTTGCAGGCCAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS GCA 72 bp | TGCTGCTTGACAATATGGTCCCGACTCTCTTGGATCTaGTTCAGCTTCTGGAGGCCTGGGTTGGGGAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: CCLTIWSRLSWI*FSFWRPGLGRN Trigger: GTTCCTCCCCAACCCAGGCCTCCAGAAGCTGAAGCAGATCCAAGAGAGTCGGGACCATATTGTCAAGCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS CCA 72 bp | CCGACTCTCTTGGATCTGCTTCAGCTTCTGGAGGCCTaGGTTGGGGAGGAACCTGAGAAGGGGAATTATCGT | + |
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Preference number: 6 (lower is better) Translates to: PTLLDLLQLLEA*VGEEPEKGNYR Trigger: ACGATAATTCCCCTTCTCAGGTTCCTCCCCAACCCAGGCCTCCAGAAGCTGAAGCAGATCCAAGAGAGTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS CCA 72 bp | TTCAGCTGCTGCTTGACAATATGGTCCCGACTCTCTTaGATCTGCTTCAGCTTCTGGAGGCCTGGGTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: FSCCLTIWSRLS*ICFSFWRPGLG Trigger: CCCCAACCCAGGCCTCCAGAAGCTGAAGCAGATCCAAGAGAGTCGGGACCATATTGTCAAGCAGCAGCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS CAA 72 bp | CTTCAGCTGCTGCTTGACAATATGGTCCCGACTCTCTaGGATCTGCTTCAGCTTCTGGAGGCCTGGGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: LQLLLDNMVPTL*DLLQLLEAWVG Trigger: CCCAACCCAGGCCTCCAGAAGCTGAAGCAGATCCAAGAGAGTCGGGACCATATTGTCAAGCAGCAGCTGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS TCA 72 bp | GCTTCAGCTTCTGGAGGCCTGGGTTGGGGAGGAACCTaGGAAGGGGAATTATCGTCAAGATTTGGATGGACC | + |
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Preference number: 6 (lower is better) Translates to: ASASGGLGWGGT*EGELSSRFGWT Trigger: GGTCCATCCAAATCTTGACGATAATTCCCCTTCTCAGGTTCCTCCCCAACCCAGGCCTCCAGAAGCTGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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| CDS CAA 90 bp | TGGTCCCGACTCTCTTGGATCTGCTTCAGCTTCTGGAGGCCTGGGTaGGGGAGGAACCTGAGAAGGGGAATTATCGTCAAGATTTGGATG | + |
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Preference number: 6 (lower is better) Translates to: WSRLSWICFSFWRPG*GRNLRRGIIVKIWM Trigger: CATCCAAATCTTGACGATAATTCCCCTTCTCAGGTTCCTCCCCAACCCAGGCCTCCAGAAGCTGAAGCAGATCCAAGAGAGTCGGGACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025223.9 |
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