Pregenerated sensors for CYP20A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049439Ensembl transcript IDs: ENSMUST00000060608.13, ENSMUST00000148443.3
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGTCAGCAAAGCGGTCTGGATCAAACCTGTGTGGTAATGGCCAAGTaGTGGGGTCCTGAAGAACCACGCCAAGGGCATAAAGGACGAGTG | + |
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Preference number: 1 (lower is better) Translates to: RQQSGLDQTCVVMAK*WGPEEPRQGHKGRV Trigger: CACTCGTCCTTTATGCCCTTGGCGTGGTTCTTCAGGACCCCAGCACTTGGCCATTACCACACAGGTTTGATCCAGACCGCTTTGCTGACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148443.3 |
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| 3UTR CCA 90 bp | CAGCAAAGCGGTCTGGATCAAACCTGTGTGGTAATGGCCAAGTGCTaGGGTCCTGAAGAACCACGCCAAGGGCATAAAGGACGAGTGTCT | + |
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Preference number: 1 (lower is better) Translates to: QQSGLDQTCVVMAKC*GPEEPRQGHKGRVS Trigger: AGACACTCGTCCTTTATGCCCTTGGCGTGGTTCTTCAGGACCCCAGCACTTGGCCATTACCACACAGGTTTGATCCAGACCGCTTTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148443.3 |
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| 3UTR GCA 90 bp | TTCTCCAGTCGTCGTAAGGAAATGGATCGTCCAGGTACACAACCTTaGAGTTATTATGCAGCTGGCCAGAGAGAACACCACACAGTCCTC | + |
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Preference number: 1 (lower is better) Translates to: FSSRRKEMDRPGTQP*SYYAAGQREHHTVL Trigger: GAGGACTGTGTGGTGTTCTCTCTGGCCAGCTGCATAATAACTGCAAGGTTGTGTACCTGGACGATCCATTTCCTTACGACGACTGGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148443.3 |
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| 3UTR TCA 90 bp | GGACCCTCCCCTAAAACTTGGTCTATCTCCTTGCATAGCTTCTTCTaGACTTCTCCAGTCGTCGTAAGGAAATGGATCGTCCAGGTACAC | + |
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Preference number: 1 (lower is better) Translates to: GPSPKTWSISLHSFF*TSPVVVRKWIVQVH Trigger: GTGTACCTGGACGATCCATTTCCTTACGACGACTGGAGAAGTTCAGAAGAAGCTATGCAAGGAGATAGACCAAGTTTTAGGGGAGGGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148443.3 |
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| 3UTR TCA 90 bp | GGTCACCATGTAAGCAAACCTCAGTTCTGGACATTCCCATGTGCCTaGGAAGCCAAGAGAAGAAAACACTTTCATCACTGGCTCGTCAGC | + |
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Preference number: 1 (lower is better) Translates to: GHHVSKPQFWTFPCA*EAKRRKHFHHWLVS Trigger: GCTGACGAGCCAGTGATGAAAGTGTTTTCTTCTCTTGGCTTCTCAGGCACATGGGAATGTCCAGAACTGAGGTTTGCTTACATGGTGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148443.3 |
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| 3UTR CCA 90 bp | GGAAATGGATCGTCCAGGTACACAACCTTGCAGTTATTATGCAGCTaGCCAGAGAGAACACCACACAGTCCTCTAGGATCTGTTGCTCAT | + |
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Preference number: 1 (lower is better) Translates to: GNGSSRYTTLQLLCS*PERTPHSPLGSVAH Trigger: ATGAGCAACAGATCCTAGAGGACTGTGTGGTGTTCTCTCTGGCCAGCTGCATAATAACTGCAAGGTTGTGTACCTGGACGATCCATTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148443.3 |
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| 3UTR TCA 90 bp | TTCCAATCTCAGACCACACTGTGCCATGAATCTTTTGGAATCGGATaGCCTCCTGTTCATCTTCAAAGGTGCTACCCAGTACCATCCTTG | + |
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Preference number: 1 (lower is better) Translates to: FQSQTTLCHESFGIG*PPVHLQRCYPVPSL Trigger: CAAGGATGGTACTGGGTAGCACCTTTGAAGATGAACAGGAGGTCATCCGATTCCAAAAGATTCATGGCACAGTGTGGTCTGAGATTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148443.3 |
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| 3UTR GCA 90 bp | TCTAACAATTCTTCTGAAAGCTGTAGCAGGAGAGGGAAGTTACTATaGAGAGAAGCTGTCACGGCATCTCCATACAGTTTCCTCCTCACG | + |
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Preference number: 1 (lower is better) Translates to: SNNSSESCSRRGKLL*REAVTASPYSFLLT Trigger: CGTGAGGAGGAAACTGTATGGAGATGCCGTGACAGCTTCTCTGCATAGTAACTTCCCTCTCCTGCTACAGCTTTCAGAAGAATTGTTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148443.3 |
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| 3UTR TCA 90 bp | GTCTCCTTAGGAATAACAAATGGGCCGACTTTTCCTTCAATGTCTTaGAGCCGGGCAGAAACTGGAGTTAGTTTAGCAGTCCGAACAGTT | + |
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Preference number: 1 (lower is better) Translates to: VSLGITNGPTFPSMS*SRAETGVSLAVRTV Trigger: AACTGTTCGGACTGCTAAACTAACTCCAGTTTCTGCCCGGCTTCAAGACATTGAAGGAAAAGTCGGCCCATTTGTTATTCCTAAGGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148443.3 |
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| 3UTR-3UTR CCA 90 bp | AAGTGCTGGGGTCCTGAAGAACCACGCCAAGGGCATAAAGGACGAGTGTCTCCTAGTTTCCTCCTCACGTaGTCCTCACCCGCACTCCCT | + |
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Preference number: 2 (lower is better) Translates to: KCWGPEEPRQGHKGRVSPSFLLT*SSPALP Trigger: AGGGAGTGCGGGTGAGGACCACGTGAGGAGGAAACT...AGGAGACACTCGTCCTTTATGCCCTTGGCGTGGTTCTTCAGGACCCCAGCACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148443.3 |
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| 3UTR-3UTR TCA 90 bp | AGTGCTGGGGTCCTGAAGAACCACGCCAAGGGCATAAAGGACGAGTGTCTCCTTTTTCCTTCAATGTCTTaGAGCCGGGCAGAAACTGGA | + |
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Preference number: 2 (lower is better) Translates to: SAGVLKNHAKGIKDECLLFPSMS*SRAETG Trigger: TCCAGTTTCTGCCCGGCTTCAAGACATTGAAGGAAA...AAGGAGACACTCGTCCTTTATGCCCTTGGCGTGGTTCTTCAGGACCCCAGCACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148443.3 |
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| 3UTR-3UTR TCA 90 bp | TTCATCACTGGCTCGTCAGCAAAGCGGTCTGGATCAAACCTGTGTGGTAATGGCCTCCCTCCGCCAGACTaGTACCCTAATAATGACTTC | + |
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Preference number: 2 (lower is better) Translates to: FITGSSAKRSGSNLCGNGLPPPD*YPNNDF Trigger: GAAGTCATTATTAGGGTATCAGTCTGGCGGAGGGAG...GCCATTACCACACAGGTTTGATCCAGACCGCTTTGCTGACGAGCCAGTGATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148443.3 |
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| 3UTR-3UTR GCA 90 bp | AAGTGCTGGGGTCCTGAAGAACCACGCCAAGGGCATAAAGGACGAGTGTCTCCTACCTTGCAGTTATTATaGAGCTGGCCAGAGAGAACA | + |
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Preference number: 2 (lower is better) Translates to: KCWGPEEPRQGHKGRVSPTLQLL*SWPERT Trigger: TGTTCTCTCTGGCCAGCTGCATAATAACTGCAAGGT...AGGAGACACTCGTCCTTTATGCCCTTGGCGTGGTTCTTCAGGACCCCAGCACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148443.3 |
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| 3UTR-3UTR CCA 90 bp | CAGAGGCAGGTGGATCTCTATGAGTTTGAGGCCAGTCTGGTCTACAGAGTGAGTAAATTTAGCCAGGCGTaGTGGCGCACGCCTTTAATC | + |
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Preference number: 2 (lower is better) Translates to: QRQVDLYEFEASLVYRVSKFSQA*WRTPLI Trigger: GATTAAAGGCGTGCGCCACCACGCCTGGCTAAATTT...ACTCACTCTGTAGACCAGACTGGCCTCAAACTCATAGAGATCCACCTGCCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060608.13 ENSMUST00000148443.3 |
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| 3UTR-3UTR CCA 90 bp | GGGGTCCTGAAGAACCACGCCAAGGGCATAAAGGACGAGTGTCTCCTTAGGAATCAGTTATTATGCAGCTaGCCAGAGAGAACACCACAC | + |
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Preference number: 2 (lower is better) Translates to: GVLKNHAKGIKDECLLRNQLLCS*PERTPH Trigger: GTGTGGTGTTCTCTCTGGCCAGCTGCATAATAACTG...ATTCCTAAGGAGACACTCGTCCTTTATGCCCTTGGCGTGGTTCTTCAGGACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148443.3 |
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| 3UTR-3UTR TCA 90 bp | GAAAACACTTTCATCACTGGCTCGTCAGCAAAGCGGTCTGGATCAAACCTGTGTGTCTGGTCTACAGAGTaGGTTACAGAGCAGTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: ENTFITGSSAKRSGSNLCVWSTE*VTEQSG Trigger: CCCTGACTGCTCTGTAACTCACTCTGTAGACCAGAC...ACACAGGTTTGATCCAGACCGCTTTGCTGACGAGCCAGTGATGAAAGTGTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148443.3 |
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| 3UTR-3UTR CCA 90 bp | AAGTGCTGGGGTCCTGAAGAACCACGCCAAGGGCATAAAGGACGAGTGTCTCCTAGCACATACTCTAACTaGGCATTTCCCTTCATTTAC | + |
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Preference number: 2 (lower is better) Translates to: KCWGPEEPRQGHKGRVSPSTYSN*AFPFIY Trigger: GTAAATGAAGGGAAATGCCCAGTTAGAGTATGTGCT...AGGAGACACTCGTCCTTTATGCCCTTGGCGTGGTTCTTCAGGACCCCAGCACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148443.3 |
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| 3UTR-3UTR GCA 90 bp | TTCATCACTGGCTCGTCAGCAAAGCGGTCTGGATCAAACCTGTGTGGTAATGGCTCTCAGACCACACTGTaGCATGAATCTTTTGGAATC | + |
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Preference number: 2 (lower is better) Translates to: FITGSSAKRSGSNLCGNGSQTTL*HESFGI Trigger: GATTCCAAAAGATTCATGGCACAGTGTGGTCTGAGA...GCCATTACCACACAGGTTTGATCCAGACCGCTTTGCTGACGAGCCAGTGATGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148443.3 |
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| 3UTR-3UTR CCA 90 bp | CAGAGGCAGGTGGATCTCTATGAGTTTGAGGCCAGTCTGGTCTACAGAGTGAGTAGCACATACTCTAACTaGGCATTTCCCTTCATTTAC | + |
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Preference number: 2 (lower is better) Translates to: QRQVDLYEFEASLVYRVSSTYSN*AFPFIY Trigger: GTAAATGAAGGGAAATGCCCAGTTAGAGTATGTGCT...ACTCACTCTGTAGACCAGACTGGCCTCAAACTCATAGAGATCCACCTGCCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060608.13 ENSMUST00000148443.3 |
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| 3UTR-3UTR TCA 90 bp | AGCACATACTCTAACTGGGCATTTCCCTTCATTTACCTAACAGACTTTAAGTGCGTCTGGTCTACAGAGTaGGTTACAGAGCAGTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: STYSNWAFPFIYLTDFKCVWSTE*VTEQSG Trigger: CCCTGACTGCTCTGTAACTCACTCTGTAGACCAGAC...GCACTTAAAGTCTGTTAGGTAAATGAAGGGAAATGCCCAGTTAGAGTATGTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060608.13 ENSMUST00000148443.3 |
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| 3UTR-3UTR CCA 90 bp | AGCACATACTCTAACTGGGCATTTCCCTTCATTTACCTAACAGACTTTAAGTGCGGAGGCAGAGGCAGGTaGATCTCTATGAGTTTGAGG | + |
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Preference number: 2 (lower is better) Translates to: STYSNWAFPFIYLTDFKCGGRGR*ISMSLR Trigger: CCTCAAACTCATAGAGATCCACCTGCCTCTGCCTCC...GCACTTAAAGTCTGTTAGGTAAATGAAGGGAAATGCCCAGTTAGAGTATGTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060608.13 ENSMUST00000148443.3 |
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| 3UTR-3UTR CCA 90 bp | TCTCCAACTTGCACAAAAGAACTCTCTAAGATTACTCATTTGAGAGGTCAAATTTTGATCCTAGCTCTCTaGAGGCAGAGGCAGGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: SPTCTKELSKITHLRGQILILAL*RQRQVD Trigger: ATCCACCTGCCTCTGCCTCCAGAGAGCTAGGATCAA...AATTTGACCTCTCAAATGAGTAATCTTAGAGAGTTCTTTTGTGCAAGTTGGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060608.13 ENSMUST00000148443.3 |
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| 3UTR GCA 72 bp | AGCGGTCTGGATCAAACCTGTGTGGTAATGGCCAAGTaGTGGGGTCCTGAAGAACCACGCCAAGGGCATAAA | + |
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Preference number: 3 (lower is better) Translates to: SGLDQTCVVMAK*WGPEEPRQGHK Trigger: TTTATGCCCTTGGCGTGGTTCTTCAGGACCCCAGCACTTGGCCATTACCACACAGGTTTGATCCAGACCGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148443.3 |
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| 3UTR GCA 72 bp | CAGGCGCAGCCTCTTCAGCAACACACTCACAAGCACTaGGGTCACCATGTAAGCAAACCTCAGTTCTGGACA | + |
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Preference number: 3 (lower is better) Translates to: QAQPLQQHTHKH*GHHVSKPQFWT Trigger: TGTCCAGAACTGAGGTTTGCTTACATGGTGACCGCAGTGCTTGTGAGTGTGTTGCTGAAGAGGCTGCGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148443.3 |
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| 3UTR CCA 72 bp | GGTCTGGATCAAACCTGTGTGGTAATGGCCAAGTGCTaGGGTCCTGAAGAACCACGCCAAGGGCATAAAGGA | + |
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Preference number: 3 (lower is better) Translates to: GLDQTCVVMAKC*GPEEPRQGHKG Trigger: TCCTTTATGCCCTTGGCGTGGTTCTTCAGGACCCCAGCACTTGGCCATTACCACACAGGTTTGATCCAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148443.3 |
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| 3UTR GCA 72 bp | CGTCGTAAGGAAATGGATCGTCCAGGTACACAACCTTaGAGTTATTATGCAGCTGGCCAGAGAGAACACCAC | + |
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Preference number: 3 (lower is better) Translates to: RRKEMDRPGTQP*SYYAAGQREHH Trigger: GTGGTGTTCTCTCTGGCCAGCTGCATAATAACTGCAAGGTTGTGTACCTGGACGATCCATTTCCTTACGACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148443.3 |
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| 3UTR GCA 72 bp | AATGGATCGTCCAGGTACACAACCTTGCAGTTATTATaGAGCTGGCCAGAGAGAACACCACACAGTCCTCTA | + |
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Preference number: 3 (lower is better) Translates to: NGSSRYTTLQLL*SWPERTPHSPL Trigger: TAGAGGACTGTGTGGTGTTCTCTCTGGCCAGCTGCATAATAACTGCAAGGTTGTGTACCTGGACGATCCATT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148443.3 |
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| 3UTR TCA 72 bp | CAGACCACACTGTGCCATGAATCTTTTGGAATCGGATaGCCTCCTGTTCATCTTCAAAGGTGCTACCCAGTA | + |
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Preference number: 3 (lower is better) Translates to: QTTLCHESFGIG*PPVHLQRCYPV Trigger: TACTGGGTAGCACCTTTGAAGATGAACAGGAGGTCATCCGATTCCAAAAGATTCATGGCACAGTGTGGTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148443.3 |
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| 3UTR GCA 72 bp | GCCAGAGAGAACACCACACAGTCCTCTAGGATCTGTTaGTCATTAAGTTTTCCCTGTGTTAAGGAGTCGATG | + |
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Preference number: 3 (lower is better) Translates to: ARENTTQSSRIC*SLSFPCVKESM Trigger: CATCGACTCCTTAACACAGGGAAAACTTAATGAGCAACAGATCCTAGAGGACTGTGTGGTGTTCTCTCTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148443.3 |
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| 3UTR TCA 72 bp | GTTCATCTTCAAAGGTGCTACCCAGTACCATCCTTGTaGCAAACTTCAAAGCAAAACCGAGCATATGCTGGC | + |
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Preference number: 3 (lower is better) Translates to: VHLQRCYPVPSL*QTSKQNRAYAG Trigger: GCCAGCATATGCTCGGTTTTGCTTTGAAGTTTGTCACAAGGATGGTACTGGGTAGCACCTTTGAAGATGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148443.3 |
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| 3UTR TCA 72 bp | GGAATAACAAATGGGCCGACTTTTCCTTCAATGTCTTaGAGCCGGGCAGAAACTGGAGTTAGTTTAGCAGTC | + |
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Preference number: 3 (lower is better) Translates to: GITNGPTFPSMS*SRAETGVSLAV Trigger: GACTGCTAAACTAACTCCAGTTTCTGCCCGGCTTCAAGACATTGAAGGAAAAGTCGGCCCATTTGTTATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148443.3 |
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| 3UTR TCA 72 bp | CCTAAAACTTGGTCTATCTCCTTGCATAGCTTCTTCTaGACTTCTCCAGTCGTCGTAAGGAAATGGATCGTC | + |
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Preference number: 3 (lower is better) Translates to: PKTWSISLHSFF*TSPVVVRKWIV Trigger: GACGATCCATTTCCTTACGACGACTGGAGAAGTTCAGAAGAAGCTATGCAAGGAGATAGACCAAGTTTTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148443.3 |
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| 3UTR GCA 72 bp | AGTTTTCCCTGTGTTAAGGAGTCGATGAAGGTGTGTTaGCTGAAGTTCCCTCCTTTTCGTTCCTTTATGATT | + |
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Preference number: 3 (lower is better) Translates to: SFPCVKESMKVC*LKFPPFRSFMI Trigger: AATCATAAAGGAACGAAAAGGAGGGAACTTCAGGCAACACACCTTCATCGACTCCTTAACACAGGGAAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148443.3 |
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| 3UTR CCA 72 bp | ACTGGGTTTATAAAAGGTCTCAGCACATACTCTAACTaGGCATTTCCCTTCATTTACCTAACAGACTTTAAG | + |
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Preference number: 3 (lower is better) Translates to: TGFIKGLSTYSN*AFPFIYLTDFK Trigger: CTTAAAGTCTGTTAGGTAAATGAAGGGAAATGCCCAGTTAGAGTATGTGCTGAGACCTTTTATAAACCCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060608.13 ENSMUST00000148443.3 |
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| CDS-3UTR TCA 90 bp | CAGAGGCAGGTGGATCTCTATGAGTTTGAGGCCAGTCTGGTCTACAGAGTGAGTAAGCCCTGGAATTCCTaGAGCTTGCCGGGAAGCCGG | + |
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Preference number: 4 (lower is better) Translates to: QRQVDLYEFEASLVYRVSKPWNS*SLPGSR Trigger: CCGGCTTCCCGGCAAGCTTCAGGAATTCCAGGGCTT...ACTCACTCTGTAGACCAGACTGGCCTCAAACTCATAGAGATCCACCTGCCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060608.13 ENSMUST00000148443.3 |
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| CDS-3UTR TCA 90 bp | CGTCCAGGTACACAACCTTGCAGTTATTATGCAGCTGGCCAGAGAGAACACCACAAGCCCTGGAATTCCTaGAGCTTGCCGGGAAGCCGG | + |
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Preference number: 4 (lower is better) Translates to: RPGTQPCSYYAAGQREHHKPWNS*SLPGSR Trigger: CCGGCTTCCCGGCAAGCTTCAGGAATTCCAGGGCTT...GTGGTGTTCTCTCTGGCCAGCTGCATAATAACTGCAAGGTTGTGTACCTGGACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148443.3 |
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| CDS-3UTR CCA 90 bp | CAGAGGCAGGTGGATCTCTATGAGTTTGAGGCCAGTCTGGTCTACAGAGTGAGTAGTTTCCTCCTCACGTaGTCCTCACCCGCACTCCCT | + |
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Preference number: 4 (lower is better) Translates to: QRQVDLYEFEASLVYRVSSFLLT*SSPALP Trigger: AGGGAGTGCGGGTGAGGACCACGTGAGGAGGAAACT...ACTCACTCTGTAGACCAGACTGGCCTCAAACTCATAGAGATCCACCTGCCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060608.13 |
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| CDS-3UTR GCA 90 bp | CAGAGGCAGGTGGATCTCTATGAGTTTGAGGCCAGTCTGGTCTACAGAGTGAGTGTGGTAATGGCCAAGTaGTGGGGTCCTGAAGAACCA | + |
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Preference number: 4 (lower is better) Translates to: QRQVDLYEFEASLVYRVSVVMAK*WGPEEP Trigger: TGGTTCTTCAGGACCCCAGCACTTGGCCATTACCAC...ACTCACTCTGTAGACCAGACTGGCCTCAAACTCATAGAGATCCACCTGCCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060608.13 |
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| CDS-3UTR TCA 90 bp | TTTGAGGCCAGTCTGGTCTACAGAGTGAGTTACAGAGCAGTCAGGGCTACACAGCTCCCTCCGCCAGACTaGTACCCTAATAATGACTTC | + |
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Preference number: 4 (lower is better) Translates to: FEASLVYRVSYRAVRATQLPPPD*YPNNDF Trigger: GAAGTCATTATTAGGGTATCAGTCTGGCGGAGGGAG...CTGTGTAGCCCTGACTGCTCTGTAACTCACTCTGTAGACCAGACTGGCCTCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060608.13 |
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| CDS-3UTR TCA 90 bp | TTTGAGGCCAGTCTGGTCTACAGAGTGAGTTACAGAGCAGTCAGGGCTACACAGCTGCTCAATTTTCTCTaGAGTGATAGGACCCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: FEASLVYRVSYRAVRATQLLNFL*SDRTLP Trigger: GGGGAGGGTCCTATCACTTCAGAGAAAATTGAGCAG...CTGTGTAGCCCTGACTGCTCTGTAACTCACTCTGTAGACCAGACTGGCCTCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060608.13 |
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| CDS-3UTR CCA 90 bp | TTTGAGGCCAGTCTGGTCTACAGAGTGAGTTACAGAGCAGTCAGGGCTACACAGAAACCGAGCATATGCTaGCTCAGAGGTATGTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: FEASLVYRVSYRAVRATQKPSIC*LRGMCW Trigger: CCAGCACATACCTCTGAGCCAGCATATGCTCGGTTT...CTGTGTAGCCCTGACTGCTCTGTAACTCACTCTGTAGACCAGACTGGCCTCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060608.13 |
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| CDS-3UTR TCA 90 bp | CAGAGGCAGGTGGATCTCTATGAGTTTGAGGCCAGTCTGGTCTACAGAGTGAGTTTTCCTTCAATGTCTTaGAGCCGGGCAGAAACTGGA | + |
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Preference number: 4 (lower is better) Translates to: QRQVDLYEFEASLVYRVSFPSMS*SRAETG Trigger: TCCAGTTTCTGCCCGGCTTCAAGACATTGAAGGAAA...ACTCACTCTGTAGACCAGACTGGCCTCAAACTCATAGAGATCCACCTGCCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060608.13 |
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| CDS-3UTR CCA 90 bp | CAGAGGCAGGTGGATCTCTATGAGTTTGAGGCCAGTCTGGTCTACAGAGTGAGTCAGTTATTATGCAGCTaGCCAGAGAGAACACCACAC | + |
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Preference number: 4 (lower is better) Translates to: QRQVDLYEFEASLVYRVSQLLCS*PERTPH Trigger: GTGTGGTGTTCTCTCTGGCCAGCTGCATAATAACTG...ACTCACTCTGTAGACCAGACTGGCCTCAAACTCATAGAGATCCACCTGCCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060608.13 |
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| CDS-3UTR CCA 90 bp | CAGAGGCAGGTGGATCTCTATGAGTTTGAGGCCAGTCTGGTCTACAGAGTGAGTAAACACTTTCATCACTaGCTCGTCAGCAAAGCGGTC | + |
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Preference number: 4 (lower is better) Translates to: QRQVDLYEFEASLVYRVSKHFHH*LVSKAV Trigger: GACCGCTTTGCTGACGAGCCAGTGATGAAAGTGTTT...ACTCACTCTGTAGACCAGACTGGCCTCAAACTCATAGAGATCCACCTGCCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060608.13 |
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| CDS-3UTR TCA 90 bp | TTTGAGGCCAGTCTGGTCTACAGAGTGAGTTACAGAGCAGTCAGGGCTACACAGAGCTTCTTCCCTTGCTaGTGTGACCAGTTCATACTT | + |
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Preference number: 4 (lower is better) Translates to: FEASLVYRVSYRAVRATQSFFPC*CDQFIL Trigger: AAGTATGAACTGGTCACATCAGCAAGGGAAGAAGCT...CTGTGTAGCCCTGACTGCTCTGTAACTCACTCTGTAGACCAGACTGGCCTCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060608.13 |
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| CDS-3UTR TCA 90 bp | CAGAGGCAGGTGGATCTCTATGAGTTTGAGGCCAGTCTGGTCTACAGAGTGAGTCTTCCCTTGCTGATGTaGCCAGTTCATACTTCATTT | + |
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Preference number: 4 (lower is better) Translates to: QRQVDLYEFEASLVYRVSLPLLM*PVHTSF Trigger: AAATGAAGTATGAACTGGTCACATCAGCAAGGGAAG...ACTCACTCTGTAGACCAGACTGGCCTCAAACTCATAGAGATCCACCTGCCTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060608.13 |
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| CDS-3UTR GCA 90 bp | CAGAGGCAGGTGGATCTCTATGAGTTTGAGGCCAGTCTGGTCTACAGAGTGAGTGGCCCGTATCTTTCATaGAAATTAACCAGGAACTCA | + |
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Preference number: 4 (lower is better) Translates to: QRQVDLYEFEASLVYRVSGPYLS*KLTRNS Trigger: TGAGTTCCTGGTTAATTTGCATGAAAGATACGGGCC...ACTCACTCTGTAGACCAGACTGGCCTCAAACTCATAGAGATCCACCTGCCTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060608.13 |
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| CDS-3UTR GCA 90 bp | CAGAGGCAGGTGGATCTCTATGAGTTTGAGGCCAGTCTGGTCTACAGAGTGAGTTTGGGGTTGAAATGTTaGTTCAGTACATCAGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: QRQVDLYEFEASLVYRVSLGLKC*FSTSVV Trigger: CACCACTGATGTACTGAAGCAACATTTCAACCCCAA...ACTCACTCTGTAGACCAGACTGGCCTCAAACTCATAGAGATCCACCTGCCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060608.13 |
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| CDS-3UTR CCA 90 bp | CAGAGGCAGGTGGATCTCTATGAGTTTGAGGCCAGTCTGGTCTACAGAGTGAGTCAACATGGTTTCAAATaGGTCCGAAGTCTTATTGGG | + |
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Preference number: 4 (lower is better) Translates to: QRQVDLYEFEASLVYRVSQHGFK*VRSLIG Trigger: CCCAATAAGACTTCGGACCCATTTGAAACCATGTTG...ACTCACTCTGTAGACCAGACTGGCCTCAAACTCATAGAGATCCACCTGCCTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060608.13 |
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| CDS-3UTR CCA 90 bp | CCCAGTACCATCCTTGTGACAAACTTCAAAGCAAAACCGAGCATATGCTGGCTCTCCGTTTTCTTCAGTTaGAGTAAGCCCTGGAATTCC | + |
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Preference number: 4 (lower is better) Translates to: PSTILVTNFKAKPSICWLSVFFS*SKPWNS Trigger: GGAATTCCAGGGCTTACTCCAACTGAAGAAAACGGA...GAGCCAGCATATGCTCGGTTTTGCTTTGAAGTTTGTCACAAGGATGGTACTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148443.3 |
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| CDS-3UTR GCA 90 bp | TTTGAGGCCAGTCTGGTCTACAGAGTGAGTTACAGAGCAGTCAGGGCTACACAGTTAACCAGGAACTCATaGAAACTTCCACTGTTTACA | + |
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Preference number: 4 (lower is better) Translates to: FEASLVYRVSYRAVRATQLTRNS*KLPLFT Trigger: TGTAAACAGTGGAAGTTTGCATGAGTTCCTGGTTAA...CTGTGTAGCCCTGACTGCTCTGTAACTCACTCTGTAGACCAGACTGGCCTCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060608.13 |
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| CDS-3UTR CCA 90 bp | TTTGAGGCCAGTCTGGTCTACAGAGTGAGTTACAGAGCAGTCAGGGCTACACAGATAATGACTTCAACATaGTTTCAAATGGGTCCGAAG | + |
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Preference number: 4 (lower is better) Translates to: FEASLVYRVSYRAVRATQIMTST*FQMGPK Trigger: CTTCGGACCCATTTGAAACCATGTTGAAGTCATTAT...CTGTGTAGCCCTGACTGCTCTGTAACTCACTCTGTAGACCAGACTGGCCTCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060608.13 |
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| 3UTR CAA 72 bp | TTTTCCAATCTCAGACCACACTGTGCCATGAATCTTTaGGAATCGGATGACCTCCTGTTCATCTTCAAAGGT | + |
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Preference number: 4 (lower is better) Translates to: FSNLRPHCAMNL*ESDDLLFIFKG Trigger: ACCTTTGAAGATGAACAGGAGGTCATCCGATTCCAAAAGATTCATGGCACAGTGTGGTCTGAGATTGGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148443.3 |
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| CDS-3UTR GCA 90 bp | AGCACATACTCTAACTGGGCATTTCCCTTCATTTACCTAACAGACTTTAAGTGCACCTTGCAGTTATTATaGAGCTGGCCAGAGAGAACA | + |
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Preference number: 4 (lower is better) Translates to: STYSNWAFPFIYLTDFKCTLQLL*SWPERT Trigger: TGTTCTCTCTGGCCAGCTGCATAATAACTGCAAGGT...GCACTTAAAGTCTGTTAGGTAAATGAAGGGAAATGCCCAGTTAGAGTATGTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060608.13 |
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| CDS-3UTR CCA 90 bp | AGCACATACTCTAACTGGGCATTTCCCTTCATTTACCTAACAGACTTTAAGTGCTATGTGCTGGGTCTCTaGATAGGACAGCCATTTATC | + |
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Preference number: 4 (lower is better) Translates to: STYSNWAFPFIYLTDFKCYVLGL*IGQPFI Trigger: GATAAATGGCTGTCCTATCCAGAGACCCAGCACATA...GCACTTAAAGTCTGTTAGGTAAATGAAGGGAAATGCCCAGTTAGAGTATGTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060608.13 |
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| CDS-3UTR GCA 90 bp | AGCACATACTCTAACTGGGCATTTCCCTTCATTTACCTAACAGACTTTAAGTGCTCTCAGACCACACTGTaGCATGAATCTTTTGGAATC | + |
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Preference number: 4 (lower is better) Translates to: STYSNWAFPFIYLTDFKCSQTTL*HESFGI Trigger: GATTCCAAAAGATTCATGGCACAGTGTGGTCTGAGA...GCACTTAAAGTCTGTTAGGTAAATGAAGGGAAATGCCCAGTTAGAGTATGTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060608.13 |
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| CDS-3UTR TCA 90 bp | TCTCCAACTTGCACAAAAGAACTCTCTAAGATTACTCATTTGAGAGGTCAAATTGTCTTTTGGAGACAGTaGTCCAAGCTTCTTCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: SPTCTKELSKITHLRGQIVFWRQ*SKLLPL Trigger: CAAGGGAAGAAGCTTGGATCACTGTCTCCAAAAGAC...AATTTGACCTCTCAAATGAGTAATCTTAGAGAGTTCTTTTGTGCAAGTTGGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060608.13 |
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| CDS-3UTR GCA 90 bp | AGCACATACTCTAACTGGGCATTTCCCTTCATTTACCTAACAGACTTTAAGTGCCTTGGTCTATCTCCTTaGATAGCTTCTTCTGAACTT | + |
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Preference number: 4 (lower is better) Translates to: STYSNWAFPFIYLTDFKCLGLSP*IASSEL Trigger: AAGTTCAGAAGAAGCTATGCAAGGAGATAGACCAAG...GCACTTAAAGTCTGTTAGGTAAATGAAGGGAAATGCCCAGTTAGAGTATGTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060608.13 |
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| CDS-3UTR GCA 90 bp | TCTCCAACTTGCACAAAAGAACTCTCTAAGATTACTCATTTGAGAGGTCAAATTCACACTCACAAGCACTaGGGTCACCATGTAAGCAAA | + |
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Preference number: 4 (lower is better) Translates to: SPTCTKELSKITHLRGQIHTHKH*GHHVSK Trigger: TTTGCTTACATGGTGACCGCAGTGCTTGTGAGTGTG...AATTTGACCTCTCAAATGAGTAATCTTAGAGAGTTCTTTTGTGCAAGTTGGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060608.13 |
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| CDS-3UTR TCA 90 bp | AGCACATACTCTAACTGGGCATTTCCCTTCATTTACCTAACAGACTTTAAGTGCAAGTCTTATTGGGGTTaGAATGTTGCTTCAGTACAT | + |
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Preference number: 4 (lower is better) Translates to: STYSNWAFPFIYLTDFKCKSYWG*NVASVH Trigger: ATGTACTGAAGCAACATTTCAACCCCAATAAGACTT...GCACTTAAAGTCTGTTAGGTAAATGAAGGGAAATGCCCAGTTAGAGTATGTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060608.13 |
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| CDS-3UTR CCA 90 bp | TCTCCAACTTGCACAAAAGAACTCTCTAAGATTACTCATTTGAGAGGTCAAATTATCTTTTTCTTCAGTTaGAGTAAGCCCTGGAATTCC | + |
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Preference number: 4 (lower is better) Translates to: SPTCTKELSKITHLRGQIIFFFS*SKPWNS Trigger: GGAATTCCAGGGCTTACTCCAACTGAAGAAAAAGAT...AATTTGACCTCTCAAATGAGTAATCTTAGAGAGTTCTTTTGTGCAAGTTGGAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060608.13 |
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| CDS TCA 90 bp | TCAAATGGGTCCGTTTTCTTCAGTTGGAGTAAGCCCTGGAATTCCTaGAGCTTGCCGGGAAGCCGGGTAGAGGTACAGCACCGCTCCCAC | + |
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Preference number: 5 (lower is better) Translates to: SNGSVFFSWSKPWNS*SLPGSRVEVQHRSH Trigger: GTGGGAGCGGTGCTGTACCTCTACCCGGCTTCCCGGCAAGCTTCAGGAATTCCAGGGCTTACTCCAACTGAAGAAAACGGACCCATTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148443.3 |
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| CDS TCA 90 bp | AAGATTACCATCTTTTTCTTCAGTTGGAGTAAGCCCTGGAATTCCTaGAGCTTGCCGGGAAGCCGGGTAGAGGTACAGCACCGCTCCCAC | + |
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Preference number: 5 (lower is better) Translates to: KITIFFFSWSKPWNS*SLPGSRVEVQHRSH Trigger: GTGGGAGCGGTGCTGTACCTCTACCCGGCTTCCCGGCAAGCTTCAGGAATTCCAGGGCTTACTCCAACTGAAGAAAAAGATGGTAATCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060608.13 |
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| CDS TCA 90 bp | AGTTTCCTCCTCACGTGGTCCTCACCCGCACTCCCTCCGCCAGACTaGTACCCTAATAATGACTTCAACATGGTTTCAAATGGGTCCGAA | + |
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Preference number: 5 (lower is better) Translates to: SFLLTWSSPALPPPD*YPNNDFNMVSNGSE Trigger: TTCGGACCCATTTGAAACCATGTTGAAGTCATTATTAGGGTATCAGTCTGGCGGAGGGAGTGCGGGTGAGGACCACGTGAGGAGGAAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060608.13 |
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| CDS-3UTR CAA 90 bp | CAGAGGCAGGTGGATCTCTATGAGTTTGAGGCCAGTCTGGTCTACAGAGTGAGTTTTTCCTTCAATGTCTaGAAGCCGGGCAGAAACTGG | + |
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Preference number: 5 (lower is better) Translates to: QRQVDLYEFEASLVYRVSFSFNV*KPGRNW Trigger: CCAGTTTCTGCCCGGCTTCAAGACATTGAAGGAAAA...ACTCACTCTGTAGACCAGACTGGCCTCAAACTCATAGAGATCCACCTGCCTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060608.13 |
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| CDS GCA 90 bp | AACATGGTTTCAAATGGGTCCGAAGTCTTATTGGGGTTGAAATGTTaGTTCAGTACATCAGTGGTGCCCAAGCTAACCACAAGACGCCTG | + |
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Preference number: 5 (lower is better) Translates to: NMVSNGSEVLLGLKC*FSTSVVPKLTTRRL Trigger: CAGGCGTCTTGTGGTTAGCTTGGGCACCACTGATGTACTGAAGCAACATTTCAACCCCAATAAGACTTCGGACCCATTTGAAACCATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060608.13 |
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| CDS-3UTR CAA 90 bp | CAGAGGCAGGTGGATCTCTATGAGTTTGAGGCCAGTCTGGTCTACAGAGTGAGTGAAGTCTTATTGGGGTaGAAATGTTGCTTCAGTACA | + |
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Preference number: 5 (lower is better) Translates to: QRQVDLYEFEASLVYRVSEVLLG*KCCFST Trigger: TGTACTGAAGCAACATTTCAACCCCAATAAGACTTC...ACTCACTCTGTAGACCAGACTGGCCTCAAACTCATAGAGATCCACCTGCCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060608.13 |
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| CDS GCA 90 bp | AGACGCCTGCCAAACCAGAAAGAGACCACAGGCCCGTATCTTTCATaGAAATTAACCAGGAACTCATGCAAACTTCCACTGTTTACAATG | + |
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Preference number: 5 (lower is better) Translates to: RRLPNQKETTGPYLS*KLTRNSCKLPLFTM Trigger: CATTGTAAACAGTGGAAGTTTGCATGAGTTCCTGGTTAATTTGCATGAAAGATACGGGCCTGTGGTCTCTTTCTGGTTTGGCAGGCGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060608.13 |
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| CDS-3UTR CAA 90 bp | AGCACATACTCTAACTGGGCATTTCCCTTCATTTACCTAACAGACTTTAAGTGCATTGGGGTTGAAATGTaGCTTCAGTACATCAGTGGT | + |
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Preference number: 5 (lower is better) Translates to: STYSNWAFPFIYLTDFKCIGVEM*LQYISG Trigger: ACCACTGATGTACTGAAGCAACATTTCAACCCCAAT...GCACTTAAAGTCTGTTAGGTAAATGAAGGGAAATGCCCAGTTAGAGTATGTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060608.13 |
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| CDS-3UTR CAA 90 bp | TCTCCAACTTGCACAAAAGAACTCTCTAAGATTACTCATTTGAGAGGTCAAATTCTTCATTTCAAAAACTaGTCTGTCCACAGCGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: SPTCTKELSKITHLRGQILHFKN*SVHSEQ Trigger: CTGCTCGCTGTGGACAGACAAGTTTTTGAAATGAAG...AATTTGACCTCTCAAATGAGTAATCTTAGAGAGTTCTTTTGTGCAAGTTGGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060608.13 |
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| CDS TCA 72 bp | TCCGTTTTCTTCAGTTGGAGTAAGCCCTGGAATTCCTaGAGCTTGCCGGGAAGCCGGGTAGAGGTACAGCAC | + |
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Preference number: 6 (lower is better) Translates to: SVFFSWSKPWNS*SLPGSRVEVQH Trigger: GTGCTGTACCTCTACCCGGCTTCCCGGCAAGCTTCAGGAATTCCAGGGCTTACTCCAACTGAAGAAAACGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148443.3 |
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| CDS TCA 72 bp | ATCTTTTTCTTCAGTTGGAGTAAGCCCTGGAATTCCTaGAGCTTGCCGGGAAGCCGGGTAGAGGTACAGCAC | + |
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Preference number: 6 (lower is better) Translates to: IFFFSWSKPWNS*SLPGSRVEVQH Trigger: GTGCTGTACCTCTACCCGGCTTCCCGGCAAGCTTCAGGAATTCCAGGGCTTACTCCAACTGAAGAAAAAGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060608.13 |
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| CDS TCA 72 bp | CTCACGTGGTCCTCACCCGCACTCCCTCCGCCAGACTaGTACCCTAATAATGACTTCAACATGGTTTCAAAT | + |
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Preference number: 6 (lower is better) Translates to: LTWSSPALPPPD*YPNNDFNMVSN Trigger: ATTTGAAACCATGTTGAAGTCATTATTAGGGTATCAGTCTGGCGGAGGGAGTGCGGGTGAGGACCACGTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060608.13 |
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| CDS CAA 90 bp | CAACATGGTTTCAAATGGGTCCGAAGTCTTATTGGGGTTGAAATGTaGCTTCAGTACATCAGTGGTGCCCAAGCTAACCACAAGACGCCT | + |
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Preference number: 6 (lower is better) Translates to: QHGFKWVRSLIGVEM*LQYISGAQANHKTP Trigger: AGGCGTCTTGTGGTTAGCTTGGGCACCACTGATGTACTGAAGCAACATTTCAACCCCAATAAGACTTCGGACCCATTTGAAACCATGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060608.13 |
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| CDS TCA 72 bp | ACATGGTTTCAAATGGGTCCGAAGTCTTATTGGGGTTaGAATGTTGCTTCAGTACATCAGTGGTGCCCAAGC | + |
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Preference number: 6 (lower is better) Translates to: TWFQMGPKSYWG*NVASVHQWCPS Trigger: GCTTGGGCACCACTGATGTACTGAAGCAACATTTCAACCCCAATAAGACTTCGGACCCATTTGAAACCATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060608.13 |
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| CDS GCA 72 bp | TCAAATGGGTCCGAAGTCTTATTGGGGTTGAAATGTTaGTTCAGTACATCAGTGGTGCCCAAGCTAACCACA | + |
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Preference number: 6 (lower is better) Translates to: SNGSEVLLGLKC*FSTSVVPKLTT Trigger: TGTGGTTAGCTTGGGCACCACTGATGTACTGAAGCAACATTTCAACCCCAATAAGACTTCGGACCCATTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060608.13 |
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| CDS CAA 72 bp | TTCAAATGGGTCCGAAGTCTTATTGGGGTTGAAATGTaGCTTCAGTACATCAGTGGTGCCCAAGCTAACCAC | + |
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Preference number: 6 (lower is better) Translates to: FKWVRSLIGVEM*LQYISGAQANH Trigger: GTGGTTAGCTTGGGCACCACTGATGTACTGAAGCAACATTTCAACCCCAATAAGACTTCGGACCCATTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060608.13 |
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