Pregenerated sensors for CYP1A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032310Ensembl transcript IDs: ENSMUST00000034860.5
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GATATGGCAGCTGGGGACGGTCAGAAAGCCGTGGTTGCCGATCCCTaGCAACCACCGTGTCCAGCTCCTCATGGATCTTCCTCTGCACGT | + |
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Preference number: 5 (lower is better) Translates to: DMAAGDGQKAVVADP*QPPCPAPHGSSSAR Trigger: ACGTGCAGAGGAAGATCCATGAGGAGCTGGACACGGTGGTTGGCAGGGATCGGCAACCACGGCTTTCTGACCGTCCCCAGCTGCCATATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034860.5 |
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| CDS GCA 90 bp | AAGGCCTCTAGATATGGCAGCTGGGGACGGTCAGAAAGCCGTGGTTaGCGATCCCTGCCAACCACCGTGTCCAGCTCCTCATGGATCTTC | + |
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Preference number: 5 (lower is better) Translates to: KASRYGSWGRSESRG*RSLPTTVSSSSWIF Trigger: GAAGATCCATGAGGAGCTGGACACGGTGGTTGGCAGGGATCGGCAACCACGGCTTTCTGACCGTCCCCAGCTGCCATATCTAGAGGCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034860.5 |
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| CDS CCA 90 bp | AAAAGCGTGGCCATGCCTGGACGTGTTCACAGGTCCCGGGCTTCATaGTCAACCCATAGTTGGGTGTCAGGTCCACCTTCACACCCGGTG | + |
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Preference number: 5 (lower is better) Translates to: KSVAMPGRVHRSRAS*STHSWVSGPPSHPV Trigger: CACCGGGTGTGAAGGTGGACCTGACACCCAACTATGGGTTGACCATGAAGCCCGGGACCTGTGAACACGTCCAGGCATGGCCACGCTTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034860.5 |
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| CDS GCA 90 bp | CACCGATTCCACCACCTGGCTGACTGGTTCGAAGTGGCCAACCTCTaGCATCGCCTTCTGAAGCTTGCTGACGAGATGGTTAGCCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: HRFHHLADWFEVANL*HRLLKLADEMVSLL Trigger: AAGGAGGCTAACCATCTCGTCAGCAAGCTTCAGAAGGCGATGGCAGAGGTTGGCCACTTCGAACCAGTCAGCCAGGTGGTGGAATCGGTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034860.5 |
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| CDS CCA 90 bp | CATGGCACCAATGACGTTAGCCACCGATTCCACCACCTGGCTGACTaGTTCGAAGTGGCCAACCTCTGCCATCGCCTTCTGAAGCTTGCT | + |
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Preference number: 5 (lower is better) Translates to: HGTNDVSHRFHHLAD*FEVANLCHRLLKLA Trigger: AGCAAGCTTCAGAAGGCGATGGCAGAGGTTGGCCACTTCGAACCAGTCAGCCAGGTGGTGGAATCGGTGGCTAACGTCATTGGTGCCATG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034860.5 |
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| CDS CCA 90 bp | AGCCGTGGTTGCCGATCCCTGCCAACCACCGTGTCCAGCTCCTCATaGATCTTCCTCTGCACGTTAGGCCATGTCACAAGTAGCAAAATG | + |
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Preference number: 5 (lower is better) Translates to: SRGCRSLPTTVSSSS*IFLCTLGHVTSSKM Trigger: CATTTTGCTACTTGTGACATGGCCTAACGTGCAGAGGAAGATCCATGAGGAGCTGGACACGGTGGTTGGCAGGGATCGGCAACCACGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034860.5 |
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| CDS TCA 90 bp | GTTGGGCAGGTAGCGCAGGACCGGGAAGAAGTCCACTGCATTCCCTaGGGTGACATTCTCCACAAAGTCCTTGCTGTTATTCACGATGTT | + |
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Preference number: 5 (lower is better) Translates to: VGQVAQDREEVHCIP*GDILHKVLAVIHDV Trigger: AACATCGTGAATAACAGCAAGGACTTTGTGGAGAATGTCACCTCAGGGAATGCAGTGGACTTCTTCCCGGTCCTGCGCTACCTGCCCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034860.5 |
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| CDS GCA 72 bp | GCTGGGGACGGTCAGAAAGCCGTGGTTGCCGATCCCTaGCAACCACCGTGTCCAGCTCCTCATGGATCTTCC | + |
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Preference number: 6 (lower is better) Translates to: AGDGQKAVVADP*QPPCPAPHGSS Trigger: GGAAGATCCATGAGGAGCTGGACACGGTGGTTGGCAGGGATCGGCAACCACGGCTTTCTGACCGTCCCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034860.5 |
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| CDS GCA 72 bp | AGTGACAGGTGTGGGTTCTTCCCCACAGTCAGCATGTaGCCAATGAAGGGCAAGCCCCAGGGTCCGGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: SDRCGFFPTVSM*PMKGKPQGPGG Trigger: TCCACCCGGACCCTGGGGCTTGCCCTTCATTGGGCACATGCTGACTGTGGGGAAGAACCCACACCTGTCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034860.5 |
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| CDS GCA 72 bp | AGAGGAAGACTTCCCACTTGGCCGGGATCTCCCCAATaGACCGGCGCTTTCCCAAGCCGAAGAGCATCACCT | + |
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Preference number: 6 (lower is better) Translates to: RGRLPTWPGSPQ*TGAFPSRRASP Trigger: AGGTGATGCTCTTCGGCTTGGGAAAGCGCCGGTGCATTGGGGAGATCCCGGCCAAGTGGGAAGTCTTCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034860.5 |
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| CDS CCA 72 bp | GCAGCAGGATGGCTAAGAAGAGGAAGACTTCCCACTTaGCCGGGATCTCCCCAATGCACCGGCGCTTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: AAGWLRRGRLPT*PGSPQCTGAFP Trigger: TGGGAAAGCGCCGGTGCATTGGGGAGATCCCGGCCAAGTGGGAAGTCTTCCTCTTCTTAGCCATCCTGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034860.5 |
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| CDS CCA 72 bp | GCCATGCCTGGACGTGTTCACAGGTCCCGGGCTTCATaGTCAACCCATAGTTGGGTGTCAGGTCCACCTTCA | + |
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Preference number: 6 (lower is better) Translates to: AMPGRVHRSRAS*STHSWVSGPPS Trigger: TGAAGGTGGACCTGACACCCAACTATGGGTTGACCATGAAGCCCGGGACCTGTGAACACGTCCAGGCATGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034860.5 |
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| CDS CAA 90 bp | CCAATGAAGGGCAAGCCCCAGGGTCCGGGTGGATTCTTCAGGCCTTaGGGAACCTGGGTCCTTGAGGCTCTGACCATCCAGAACACTAAA | + |
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Preference number: 6 (lower is better) Translates to: PMKGKPQGPGGFFRP*GTWVLEALTIQNTK Trigger: TTTAGTGTTCTGGATGGTCAGAGCCTCAAGGACCCAGGTTCCCAAAGGCCTGAAGAATCCACCCGGACCCTGGGGCTTGCCCTTCATTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034860.5 |
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| CDS GCA 72 bp | CACCACCTGGCTGACTGGTTCGAAGTGGCCAACCTCTaGCATCGCCTTCTGAAGCTTGCTGACGAGATGGTT | + |
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Preference number: 6 (lower is better) Translates to: HHLADWFEVANL*HRLLKLADEMV Trigger: AACCATCTCGTCAGCAAGCTTCAGAAGGCGATGGCAGAGGTTGGCCACTTCGAACCAGTCAGCCAGGTGGTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034860.5 |
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| CDS CCA 72 bp | ATGGCACCAATGACGTTAGCCACCGATTCCACCACCTaGCTGACTGGTTCGAAGTGGCCAACCTCTGCCATC | + |
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Preference number: 6 (lower is better) Translates to: MAPMTLATDSTT*LTGSKWPTSAI Trigger: GATGGCAGAGGTTGGCCACTTCGAACCAGTCAGCCAGGTGGTGGAATCGGTGGCTAACGTCATTGGTGCCAT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034860.5 |
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| CDS TCA 72 bp | ACTGGTTCGAAGTGGCCAACCTCTGCCATCGCCTTCTaGAGCTTGCTGACGAGATGGTTAGCCTCCTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: TGSKWPTSAIAF*SLLTRWLASLL Trigger: GAGCAAGGAGGCTAACCATCTCGTCAGCAAGCTTCAGAAGGCGATGGCAGAGGTTGGCCACTTCGAACCAGT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034860.5 |
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| CDS TCA 72 bp | GATACAGCGCTCCTTGGGAATGTGGAAGCCATTCAGTaGGGTGTCCCTCGTTGTGCTGTGGGGGATGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: DTALLGNVEAIQ*GVPRCAVGDGE Trigger: TTCACCATCCCCCACAGCACAACGAGGGACACCTCACTGAATGGCTTCCACATTCCCAAGGAGCGCTGTATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034860.5 |
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| CDS CCA 72 bp | CAGGGTCCGGGTGGATTCTTCAGGCCTTTGGGAACCTaGGTCCTTGAGGCTCTGACCATCCAGAACACTAAA | + |
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Preference number: 6 (lower is better) Translates to: QGPGGFFRPLGT*VLEALTIQNTK Trigger: TTTAGTGTTCTGGATGGTCAGAGCCTCAAGGACCCAGGTTCCCAAAGGCCTGAAGAATCCACCCGGACCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034860.5 |
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| CDS GCA 72 bp | AACCGCTCTGGGCGGAACACAAAGGGGTCTTTCCACTaGTTCTCATCATGGTTGACCTGCCACTGGTTTATG | + |
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Preference number: 6 (lower is better) Translates to: NRSGRNTKGSFH*FSSWLTCHWFM Trigger: CATAAACCAGTGGCAGGTCAACCATGATGAGAAGCAGTGGAAAGACCCCTTTGTGTTCCGCCCAGAGCGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034860.5 |
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| CDS CCA 72 bp | CGCTTTCCCAAGCCGAAGAGCATCACCTTCTCGCTCTaGGTCTTGTCGATGGCCGAGTTGTTATTGGTAAGA | + |
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Preference number: 6 (lower is better) Translates to: RFPKPKSITFSL*VLSMAELLLVR Trigger: TCTTACCAATAACAACTCGGCCATCGACAAGACCCAGAGCGAGAAGGTGATGCTCTTCGGCTTGGGAAAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034860.5 |
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| CDS TCA 72 bp | GTAGCGCAGGACCGGGAAGAAGTCCACTGCATTCCCTaGGGTGACATTCTCCACAAAGTCCTTGCTGTTATT | + |
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Preference number: 6 (lower is better) Translates to: VAQDREEVHCIP*GDILHKVLAVI Trigger: AATAACAGCAAGGACTTTGTGGAGAATGTCACCTCAGGGAATGCAGTGGACTTCTTCCCGGTCCTGCGCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034860.5 |
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| CDS CAA 72 bp | TGGACAGTTTTCTGCAGAAACAGCACGAAGTTATCATaGAAGGTCTTAAACCTCTTGAGGGCCGGGTTGGGC | + |
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Preference number: 6 (lower is better) Translates to: WTVFCRNSTKLS*KVLNLLRAGLG Trigger: GCCCAACCCGGCCCTCAAGAGGTTTAAGACCTTCAATGATAACTTCGTGCTGTTTCTGCAGAAAACTGTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034860.5 |
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| CDS CAA 72 bp | GTGTCAAAGCCAGCTCCAAAGATGTCATTGACAATGTaGACAATCTTCTCCTCGGGGATGAGACCGCCATTG | + |
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Preference number: 6 (lower is better) Translates to: VSKPAPKMSLTM*TIFSSGMRPPL Trigger: CAATGGCGGTCTCATCCCCGAGGAGAAGATTGTCAACATTGTCAATGACATCTTTGGAGCTGGCTTTGACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034860.5 |
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| CDS CAA 90 bp | GTCTTTGTAGTTCTCGCTGTGCTTGAACAGGGCACTTGTGATGTCTaGGATACTGTTCTTGTTGAAGTCTTGGTAGTGCTCCTGGACAGT | + |
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Preference number: 6 (lower is better) Translates to: VFVVLAVLEQGTCDV*DTVLVEVLVVLLDS Trigger: ACTGTCCAGGAGCACTACCAAGACTTCAACAAGAACAGTATCCAAGACATCACAAGTGCCCTGTTCAAGCACAGCGAGAACTACAAAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034860.5 |
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| CDS CAA 72 bp | GTTCTCGCTGTGCTTGAACAGGGCACTTGTGATGTCTaGGATACTGTTCTTGTTGAAGTCTTGGTAGTGCTC | + |
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Preference number: 6 (lower is better) Translates to: VLAVLEQGTCDV*DTVLVEVLVVL Trigger: GAGCACTACCAAGACTTCAACAAGAACAGTATCCAAGACATCACAAGTGCCCTGTTCAAGCACAGCGAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034860.5 |
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| CDS CAA 72 bp | ACTTGTGATGTCTTGGATACTGTTCTTGTTGAAGTCTaGGTAGTGCTCCTGGACAGTTTTCTGCAGAAACAG | + |
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Preference number: 6 (lower is better) Translates to: TCDVLDTVLVEV*VVLLDSFLQKQ Trigger: CTGTTTCTGCAGAAAACTGTCCAGGAGCACTACCAAGACTTCAACAAGAACAGTATCCAAGACATCACAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034860.5 |
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