Pregenerated sensors for CYP1A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032315Ensembl transcript IDs: ENSMUST00000034865.6, ENSMUST00000216433.2
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCAGTGTCATAAACCATTTGGGAAGGCTGTTTAGCCTCAGCAGGTaGCAAGAGCACCTCTGTGCCAGAATTTTAAGCTGTCTTCTCCCT | + |
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Preference number: 1 (lower is better) Translates to: CSVINHLGRLFSLSR*QEHLCARILSCLLP Trigger: AGGGAGAAGACAGCTTAAAATTCTGGCACAGAGGTGCTCTTGCCACCTGCTGAGGCTAAACAGCCTTCCCAAATGGTTTATGACACTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| 3UTR TCA 90 bp | TCCCTCTGTTCTTGGGTCTTTCTAGACACAAGTCTCAACCCTTCCTaGAGAGAAACATGGACATGCAAGGACAGGAGCACCCTGTTTGTT | + |
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Preference number: 1 (lower is better) Translates to: SLCSWVFLDTSLNPS*RETWTCKDRSTLFV Trigger: AACAAACAGGGTGCTCCTGTCCTTGCATGTCCATGTTTCTCTTCAGGAAGGGTTGAGACTTGTGTCTAGAAAGACCCAAGAACAGAGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| 3UTR CCA 90 bp | GATCTCCTAGTTGATGCTGAAATTGAGAAGGATCTGAGGTTCCTGTaGGCCTCTGCTGTGCCCAGTGTGTGTTCAGCATATAGAGAAACA | + |
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Preference number: 1 (lower is better) Translates to: DLLVDAEIEKDLRFL*ASAVPSVCSAYRET Trigger: TGTTTCTCTATATGCTGAACACACACTGGGCACAGCAGAGGCCCACAGGAACCTCAGATCCTTCTCAATTTCAGCATCAACTAGGAGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| 3UTR-3UTR GCA 90 bp | CCCAGAGCACTCTTCAGGAGTTCTCTGAGGCCCAGGTATCTCCTAACCCTTTCAGTTCCTGTGGGCCTCTaGTGTGCCCAGTGTGTGTTC | + |
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Preference number: 2 (lower is better) Translates to: PRALFRSSLRPRYLLTLSVPVGL*CAQCVF Trigger: GAACACACACTGGGCACAGCAGAGGCCCACAGGAAC...TGAAAGGGTTAGGAGATACCTGGGCCTCAGAGAACTCCTGAAGAGTGCTCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| 3UTR-3UTR CCA 90 bp | CAGAGCACTCTTCAGGAGTTCTCTGAGGCCCAGGTATCTCCTAACCCTTTCAGAGATCTGAGGTTCCTGTaGGCCTCTGCTGTGCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: QSTLQEFSEAQVSPNPFRDLRFL*ASAVPS Trigger: ACTGGGCACAGCAGAGGCCCACAGGAACCTCAGATC...TCTGAAAGGGTTAGGAGATACCTGGGCCTCAGAGAACTCCTGAAGAGTGCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| 3UTR-3UTR GCA 90 bp | CAGAGCACTCTTCAGGAGTTCTCTGAGGCCCAGGTATCTCCTAACCCTTTCAGATGTGGGCCTCTGCTGTaGCCAGTGTGTGTTCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: QSTLQEFSEAQVSPNPFRCGPLL*PVCVQH Trigger: ATGCTGAACACACACTGGGCACAGCAGAGGCCCACA...TCTGAAAGGGTTAGGAGATACCTGGGCCTCAGAGAACTCCTGAAGAGTGCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| 3UTR-3UTR GCA 90 bp | CTCTGTGCCAGAATTTTAAGCTGTCTTCTCCCTCCATTCTGGGCAGCTCCCACTTGTGGGCCTCTGCTGTaGCCAGTGTGTGTTCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: LCARILSCLLPPFWAAPTCGPLL*PVCVQH Trigger: ATGCTGAACACACACTGGGCACAGCAGAGGCCCACA...AGTGGGAGCTGCCCAGAATGGAGGGAGAAGACAGCTTAAAATTCTGGCACAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCAGAATTTTAAGCTGTCTTCTCCCTCCATTCTGGGCAGCTCCCACTTGTCAACAGGAACAGCCACCTaGTCTGGTGAGCATCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: CQNFKLSSPSILGSSHLSTGTAT*SGEHPG Trigger: TCCAGGATGCTCACCAGACCAGGTGGCTGTTCCTGT...TGACAAGTGGGAGCTGCCCAGAATGGAGGGAGAAGACAGCTTAAAATTCTGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCCCAGAGAATCTCTCCCTCTGTTCTTGGGTCTTTCTAGACACAAGTCTCAATTTAGCCTCAGCAGGTaGCAAGAGCACCTCTGTGCC | + |
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Preference number: 2 (lower is better) Translates to: LPRESLPLFLGLSRHKSQFSLSR*QEHLCA Trigger: GGCACAGAGGTGCTCTTGCCACCTGCTGAGGCTAAA...TTGAGACTTGTGTCTAGAAAGACCCAAGAACAGAGGGAGAGATTCTCTGGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| 3UTR-3UTR CCA 90 bp | GTAGTCTATGACTGTATCCTAGCACTTGGTAAGGTAGTAAGAACAACAACAACAACAGGAACAGCCACCTaGTCTGGTGAGCATCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: VVYDCILALGKVVRTTTTTGTAT*SGEHPG Trigger: TCCAGGATGCTCACCAGACCAGGTGGCTGTTCCTGT...TGTTGTTGTTGTTCTTACTACCTTACCAAGTGCTAGGATACAGTCATAGACTAC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| 3UTR-3UTR CCA 90 bp | ATTTTATACAGTAAAGAAGAGAGACCAAGAGCTGATGCAGTAGTCTATGACTGTGATCTGAGGTTCCTGTaGGCCTCTGCTGTGCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: ILYSKEERPRADAVVYDCDLRFL*ASAVPS Trigger: ACTGGGCACAGCAGAGGCCCACAGGAACCTCAGATC...ACAGTCATAGACTACTGCATCAGCTCTTGGTCTCTCTTCTTTACTGTATAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| 3UTR-3UTR TCA 90 bp | TTATACAGTAAAGAAGAGAGACCAAGAGCTGATGCAGTAGTCTATGACTGTATCAAATTGAGAAGGATCTaGGGTTCCTGTGGGCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: LYSKEERPRADAVVYDCIKLRRI*GSCGPL Trigger: CAGAGGCCCACAGGAACCTCAGATCCTTCTCAATTT...GATACAGTCATAGACTACTGCATCAGCTCTTGGTCTCTCTTCTTTACTGTATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGAGAATCTCTCCCTCTGTTCTTGGGTCTTTCTAGACACAAGTCTCAACCCTCATCCTGCTATAACCTaGAGTATTTTTCAAACCAGT | + |
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Preference number: 2 (lower is better) Translates to: PENLSLCSWVFLDTSLNPHPAIT*SIFQTS Trigger: ACTGGTTTGAAAAATACTGCAGGTTATAGCAGGATG...AGGGTTGAGACTTGTGTCTAGAAAGACCCAAGAACAGAGGGAGAGATTCTCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| 3UTR-3UTR GCA 90 bp | TTATACAGTAAAGAAGAGAGACCAAGAGCTGATGCAGTAGTCTATGACTGTATCAGAGAAACATGGACATaGAAGGACAGGAGCACCCTG | + |
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Preference number: 2 (lower is better) Translates to: LYSKEERPRADAVVYDCIRETWT*KDRSTL Trigger: CAGGGTGCTCCTGTCCTTGCATGTCCATGTTTCTCT...GATACAGTCATAGACTACTGCATCAGCTCTTGGTCTCTCTTCTTTACTGTATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| 3UTR CCA 72 bp | CCAAGGCCTCCTTTGGTAGCAAGTTCAGAGTCAGCCTaGGCTACACAAGACTCTGTCTCAAAAGTCATTCCT | + |
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Preference number: 3 (lower is better) Translates to: PRPPLVASSESA*ATQDSVSKVIP Trigger: AGGAATGACTTTTGAGACAGAGTCTTGTGTAGCCCAGGCTGACTCTGAACTTGCTACCAAAGGAGGCCTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| 3UTR TCA 72 bp | TCTTGGGTCTTTCTAGACACAAGTCTCAACCCTTCCTaGAGAGAAACATGGACATGCAAGGACAGGAGCACC | + |
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Preference number: 3 (lower is better) Translates to: SWVFLDTSLNPS*RETWTCKDRST Trigger: GGTGCTCCTGTCCTTGCATGTCCATGTTTCTCTTCAGGAAGGGTTGAGACTTGTGTCTAGAAAGACCCAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| 3UTR-3UTR CAA 90 bp | TGCCAGAATTTTAAGCTGTCTTCTCCCTCCATTCTGGGCAGCTCCCACTTGTCATGTTTCTGGCTAAAGTaGAATCACAGGAACAGCCAC | + |
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Preference number: 3 (lower is better) Translates to: CQNFKLSSPSILGSSHLSCFWLK*NHRNSH Trigger: GTGGCTGTTCCTGTGATTCAACTTTAGCCAGAAACA...TGACAAGTGGGAGCTGCCCAGAATGGAGGGAGAAGACAGCTTAAAATTCTGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| 3UTR-3UTR CAA 90 bp | CTGCCCAGAGAATCTCTCCCTCTGTTCTTGGGTCTTTCTAGACACAAGTCTCAATGTTTCTGGCTAAAGTaGAATCACAGGAACAGCCAC | + |
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Preference number: 3 (lower is better) Translates to: LPRESLPLFLGLSRHKSQCFWLK*NHRNSH Trigger: GTGGCTGTTCCTGTGATTCAACTTTAGCCAGAAACA...TTGAGACTTGTGTCTAGAAAGACCCAAGAACAGAGGGAGAGATTCTCTGGGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| 3UTR CCA 72 bp | ATAAACCATTTGGGAAGGCTGTTTAGCCTCAGCAGGTaGCAAGAGCACCTCTGTGCCAGAATTTTAAGCTGT | + |
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Preference number: 3 (lower is better) Translates to: INHLGRLFSLSR*QEHLCARILSC Trigger: ACAGCTTAAAATTCTGGCACAGAGGTGCTCTTGCCACCTGCTGAGGCTAAACAGCCTTCCCAAATGGTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| 3UTR-3UTR CAA 90 bp | TTATACAGTAAAGAAGAGAGACCAAGAGCTGATGCAGTAGTCTATGACTGTATCAGTCCAAGGCCTCCTTaGGTAGCAAGTTCAGAGTCA | + |
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Preference number: 3 (lower is better) Translates to: LYSKEERPRADAVVYDCISPRPP*VASSES Trigger: TGACTCTGAACTTGCTACCAAAGGAGGCCTTGGACT...GATACAGTCATAGACTACTGCATCAGCTCTTGGTCTCTCTTCTTTACTGTATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| 3UTR-3UTR CAA 90 bp | TTATACAGTAAAGAAGAGAGACCAAGAGCTGATGCAGTAGTCTATGACTGTATCACAGGAGCACCCTGTTaGTTTCTATGTAGGGTGAAC | + |
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Preference number: 3 (lower is better) Translates to: LYSKEERPRADAVVYDCITGAPC*FLCRVN Trigger: GTTCACCCTACATAGAAACAAACAGGGTGCTCCTGT...GATACAGTCATAGACTACTGCATCAGCTCTTGGTCTCTCTTCTTTACTGTATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| CDS-3UTR TCA 90 bp | TCCCAGGATCTGTGTTTCTGGCTAAAGTTGAATCACAGGAACAGCCACCTGGTCGGTCTGGCCGGCCCTTaGAGTCATCTCCCTGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: SQDLCFWLKLNHRNSHLVGLAGP*SHLPAS Trigger: TGAGGCAGGGAGATGACTTCAAGGGCCGGCCAGACC...GACCAGGTGGCTGTTCCTGTGATTCAACTTTAGCCAGAAACACAGATCCTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| CDS-3UTR TCA 90 bp | CCCAGAGCACTCTTCAGGAGTTCTCTGAGGCCCAGGTATCTCCTAACCCTTTCAGAAGGGGACGAAGGATaGATGCCGGAAGGTCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: PRALFRSSLRPRYLLTLSEGDEG*MPEGLQ Trigger: CTGGAGACCTTCCGGCATTCATCCTTCGTCCCCTTC...TGAAAGGGTTAGGAGATACCTGGGCCTCAGAGAACTCCTGAAGAGTGCTCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| CDS-3UTR TCA 90 bp | CTCTGTGCCAGAATTTTAAGCTGTCTTCTCCCTCCATTCTGGGCAGCTCCCACTCAAGGCAGAATACGGTaGCAGCCAGGAGCAGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: LCARILSCLLPPFWAAPTQGRIR*QPGAAL Trigger: CAGAGCTGCTCCTGGCTGTCACCGTATTCTGCCTTG...AGTGGGAGCTGCCCAGAATGGAGGGAGAAGACAGCTTAAAATTCTGGCACAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| CDS-3UTR TCA 90 bp | CTCTGTGCCAGAATTTTAAGCTGTCTTCTCCCTCCATTCTGGGCAGCTCCCACTCCCACAGTCAGCATGTaGCCAATGAAGGGCAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: LCARILSCLLPPFWAAPTPTVSM*PMKGKP Trigger: GGGCTTGCCCTTCATTGGTCACATGCTGACTGTGGG...AGTGGGAGCTGCCCAGAATGGAGGGAGAAGACAGCTTAAAATTCTGGCACAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| CDS-3UTR TCA 90 bp | TACTGCCCAGAGAATCTCTCCCTCTGTTCTTGGGTCTTTCTAGACACAAGTCTCGGTCTGGCCGGCCCTTaGAGTCATCTCCCTGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: YCPENLSLCSWVFLDTSLGLAGP*SHLPAS Trigger: TGAGGCAGGGAGATGACTTCAAGGGCCGGCCAGACC...GAGACTTGTGTCTAGAAAGACCCAAGAACAGAGGGAGAGATTCTCTGGGCAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| CDS-3UTR TCA 90 bp | CTCTGTGCCAGAATTTTAAGCTGTCTTCTCCCTCCATTCTGGGCAGCTCCCACTGAAGGGGACGAAGGATaGATGCCGGAAGGTCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: LCARILSCLLPPFWAAPTEGDEG*MPEGLQ Trigger: CTGGAGACCTTCCGGCATTCATCCTTCGTCCCCTTC...AGTGGGAGCTGCCCAGAATGGAGGGAGAAGACAGCTTAAAATTCTGGCACAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| CDS-3UTR CCA 90 bp | CAGAGCACTCTTCAGGAGTTCTCTGAGGCCCAGGTATCTCCTAACCCTTTCAGATCTCTTGTGGTGCTGTaGGGGATGGTGAAGGGGACG | + |
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Preference number: 4 (lower is better) Translates to: QSTLQEFSEAQVSPNPFRSLVVL*GMVKGT Trigger: CGTCCCCTTCACCATCCCCCACAGCACCACAAGAGA...TCTGAAAGGGTTAGGAGATACCTGGGCCTCAGAGAACTCCTGAAGAGTGCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| CDS-3UTR TCA 90 bp | TGCCAGAATTTTAAGCTGTCTTCTCCCTCCATTCTGGGCAGCTCCCACTTGTCACAAGGCAGAATACGGTaGCAGCCAGGAGCAGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: CQNFKLSSPSILGSSHLSQGRIR*QPGAAL Trigger: CAGAGCTGCTCCTGGCTGTCACCGTATTCTGCCTTG...TGACAAGTGGGAGCTGCCCAGAATGGAGGGAGAAGACAGCTTAAAATTCTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| CDS-3UTR TCA 90 bp | GTCCCAGGATCTGTGTTTCTGGCTAAAGTTGAATCACAGGAACAGCCACCTGGTACGTCCCCATACTGCTaGCTCAGCCGTGTCAGTGAC | + |
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Preference number: 4 (lower is better) Translates to: VPGSVFLAKVESQEQPPGTSPYC*LSRVSD Trigger: GTCACTGACACGGCTGAGTCAGCAGTATGGGGACGT...ACCAGGTGGCTGTTCCTGTGATTCAACTTTAGCCAGAAACACAGATCCTGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| CDS-3UTR TCA 90 bp | GGGCCTCTGCTGTGCCCAGTGTGTGTTCAGCATATAGAGAAACAAGTCCAAAGTAGGTTCTTGTGGCTCTaGCCACCCAGAATCCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: GPLLCPVCVQHIEKQVQSRFLWL*PPRIQG Trigger: GCCTTGGATTCTGGGTGGTCAGAGCCACAAGAACCT...ACTTTGGACTTGTTTCTCTATATGCTGAACACACACTGGGCACAGCAGAGGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| CDS-3UTR TCA 90 bp | TACTGCCCAGAGAATCTCTCCCTCTGTTCTTGGGTCTTTCTAGACACAAGTCTCCCCACAGTCAGCATGTaGCCAATGAAGGGCAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: YCPENLSLCSWVFLDTSLPTVSM*PMKGKP Trigger: GGGCTTGCCCTTCATTGGTCACATGCTGACTGTGGG...GAGACTTGTGTCTAGAAAGACCCAAGAACAGAGGGAGAGATTCTCTGGGCAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| CDS-3UTR TCA 90 bp | CCAGAGAATCTCTCCCTCTGTTCTTGGGTCTTTCTAGACACAAGTCTCAACCCTACGTCCCCATACTGCTaGCTCAGCCGTGTCAGTGAC | + |
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Preference number: 4 (lower is better) Translates to: PENLSLCSWVFLDTSLNPTSPYC*LSRVSD Trigger: GTCACTGACACGGCTGAGTCAGCAGTATGGGGACGT...AGGGTTGAGACTTGTGTCTAGAAAGACCCAAGAACAGAGGGAGAGATTCTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| CDS-3UTR TCA 90 bp | CTCTGTGCCAGAATTTTAAGCTGTCTTCTCCCTCCATTCTGGGCAGCTCCCACTAACGGAGGACAGGAATaGAGTCAGCTGGGTATCCAG | + |
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Preference number: 4 (lower is better) Translates to: LCARILSCLLPPFWAAPTNGGQE*SQLGIQ Trigger: CTGGATACCCAGCTGACTTCATTCCTGTCCTCCGTT...AGTGGGAGCTGCCCAGAATGGAGGGAGAAGACAGCTTAAAATTCTGGCACAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| CDS-3UTR GCA 90 bp | TCCCAGGATCTGTGTTTCTGGCTAAAGTTGAATCACAGGAACAGCCACCTGGTCTCAGAAAGCCGGGGCTaGCGATCTCTGCCAATCACT | + |
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Preference number: 4 (lower is better) Translates to: SQDLCFWLKLNHRNSHLVSESRG*RSLPIT Trigger: AGTGATTGGCAGAGATCGGCAGCCCCGGCTTTCTGA...GACCAGGTGGCTGTTCCTGTGATTCAACTTTAGCCAGAAACACAGATCCTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| CDS-3UTR CCA 90 bp | CAGAGCACTCTTCAGGAGTTCTCTGAGGCCCAGGTATCTCCTAACCCTTTCAGAGTGATGTCCCGGATGTaGCCCTTCTCAAATGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: QSTLQEFSEAQVSPNPFRVMSRM*PFSNVL Trigger: CAGGACATTTGAGAAGGGCCACATCCGGGACATCAC...TCTGAAAGGGTTAGGAGATACCTGGGCCTCAGAGAACTCCTGAAGAGTGCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| CDS-3UTR CCA 90 bp | CAGAGCACTCTTCAGGAGTTCTCTGAGGCCCAGGTATCTCCTAACCCTTTCAGACTGACAGCTGGACATTaGCATTCTCGTCCAGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: QSTLQEFSEAQVSPNPFRLTAGH*HSRPAS Trigger: GGAAGCTGGACGAGAATGCCAATGTCCAGCTGTCAG...TCTGAAAGGGTTAGGAGATACCTGGGCCTCAGAGAACTCCTGAAGAGTGCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| CDS-3UTR CCA 90 bp | CCAGAGAATCTCTCCCTCTGTTCTTGGGTCTTTCTAGACACAAGTCTCAACCCTTCTCTTGTGGTGCTGTaGGGGATGGTGAAGGGGACG | + |
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Preference number: 4 (lower is better) Translates to: PENLSLCSWVFLDTSLNPSLVVL*GMVKGT Trigger: CGTCCCCTTCACCATCCCCCACAGCACCACAAGAGA...AGGGTTGAGACTTGTGTCTAGAAAGACCCAAGAACAGAGGGAGAGATTCTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| CDS-3UTR CCA 90 bp | GTCCCAGGATCTGTGTTTCTGGCTAAAGTTGAATCACAGGAACAGCCACCTGGTCCTCCGATCGGCCAATaGTCTCTCCGATGCACTTTC | + |
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Preference number: 4 (lower is better) Translates to: VPGSVFLAKVESQEQPPGPPIGQ*SLRCTF Trigger: GAAAGTGCATCGGAGAGACCATTGGCCGATCGGAGG...ACCAGGTGGCTGTTCCTGTGATTCAACTTTAGCCAGAAACACAGATCCTGGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| CDS-3UTR TCA 90 bp | TCCCAGGATCTGTGTTTCTGGCTAAAGTTGAATCACAGGAACAGCCACCTGGTCAACGGAGGACAGGAATaGAGTCAGCTGGGTATCCAG | + |
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Preference number: 4 (lower is better) Translates to: SQDLCFWLKLNHRNSHLVNGGQE*SQLGIQ Trigger: CTGGATACCCAGCTGACTTCATTCCTGTCCTCCGTT...GACCAGGTGGCTGTTCCTGTGATTCAACTTTAGCCAGAAACACAGATCCTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| CDS-3UTR GCA 90 bp | CTGCCCAGAGAATCTCTCCCTCTGTTCTTGGGTCTTTCTAGACACAAGTCTCAATCAGAAAGCCGGGGCTaGCGATCTCTGCCAATCACT | + |
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Preference number: 4 (lower is better) Translates to: LPRESLPLFLGLSRHKSQSESRG*RSLPIT Trigger: AGTGATTGGCAGAGATCGGCAGCCCCGGCTTTCTGA...TTGAGACTTGTGTCTAGAAAGACCCAAGAACAGAGGGAGAGATTCTCTGGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| CDS-3UTR CCA 90 bp | GTCCCAGGATCTGTGTTTCTGGCTAAAGTTGAATCACAGGAACAGCCACCTGGTCTGACAGCTGGACATTaGCATTCTCGTCCAGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: VPGSVFLAKVESQEQPPGLTAGH*HSRPAS Trigger: GGAAGCTGGACGAGAATGCCAATGTCCAGCTGTCAG...ACCAGGTGGCTGTTCCTGTGATTCAACTTTAGCCAGAAACACAGATCCTGGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| CDS-3UTR CCA 90 bp | TACTGCCCAGAGAATCTCTCCCTCTGTTCTTGGGTCTTTCTAGACACAAGTCTCCCTCCGATCGGCCAATaGTCTCTCCGATGCACTTTC | + |
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Preference number: 4 (lower is better) Translates to: YCPENLSLCSWVFLDTSLPPIGQ*SLRCTF Trigger: GAAAGTGCATCGGAGAGACCATTGGCCGATCGGAGG...GAGACTTGTGTCTAGAAAGACCCAAGAACAGAGGGAGAGATTCTCTGGGCAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| CDS-3UTR TCA 90 bp | CCAAGGCCTCCTTTGGTAGCAAGTTCAGAGTCAGCCTGGGCTACACAAGACTCTGATGACCTTATCATCTaGCAGCTGGACATTGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: PRPPLVASSESAWATQDSDDLII*QLDIGI Trigger: AATGCCAATGTCCAGCTGTCAGATGATAAGGTCATC...AGAGTCTTGTGTAGCCCAGGCTGACTCTGAACTTGCTACCAAAGGAGGCCTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS-3UTR CCA 90 bp | CTGCCCAGAGAATCTCTCCCTCTGTTCTTGGGTCTTTCTAGACACAAGTCTCAAGTGATGTCCCGGATGTaGCCCTTCTCAAATGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPRESLPLFLGLSRHKSQVMSRM*PFSNVL Trigger: CAGGACATTTGAGAAGGGCCACATCCGGGACATCAC...TTGAGACTTGTGTCTAGAAAGACCCAAGAACAGAGGGAGAGATTCTCTGGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS-3UTR CCA 90 bp | CTGCCCAGAGAATCTCTCCCTCTGTTCTTGGGTCTTTCTAGACACAAGTCTCAACACAGTTCCCGGTCATaGTTAACCTGCCACTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LPRESLPLFLGLSRHKSQHSSRS*LTCHWF Trigger: GAACCAGTGGCAGGTTAACCATGACCGGGAACTGTG...TTGAGACTTGTGTCTAGAAAGACCCAAGAACAGAGGGAGAGATTCTCTGGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS-3UTR TCA 90 bp | GTCCCAGGATCTGTGTTTCTGGCTAAAGTTGAATCACAGGAACAGCCACCTGGTAGCATATGGCACAGATaGCATTGGCTACTGACACGA | + |
|
Preference number: 4 (lower is better) Translates to: VPGSVFLAKVESQEQPPGSIWHR*HWLLTR Trigger: TCGTGTCAGTAGCCAATGTCATCTGTGCCATATGCT...ACCAGGTGGCTGTTCCTGTGATTCAACTTTAGCCAGAAACACAGATCCTGGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS-3UTR TCA 90 bp | CAGAGCACTCTTCAGGAGTTCTCTGAGGCCCAGGTATCTCCTAACCCTTTCAGAGATGACCTTATCATCTaGCAGCTGGACATTGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: QSTLQEFSEAQVSPNPFRDDLII*QLDIGI Trigger: AATGCCAATGTCCAGCTGTCAGATGATAAGGTCATC...TCTGAAAGGGTTAGGAGATACCTGGGCCTCAGAGAACTCCTGAAGAGTGCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS-3UTR CCA 90 bp | GGGCCTCTGCTGTGCCCAGTGTGTGTTCAGCATATAGAGAAACAAGTCCAAAGTAGGAATGAAGTCAGCTaGGTATCCAGAGCCAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: GPLLCPVCVQHIEKQVQSRNEVS*VSRASN Trigger: GTTACTGGCTCTGGATACCCAGCTGACTTCATTCCT...ACTTTGGACTTGTTTCTCTATATGCTGAACACACACTGGGCACAGCAGAGGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGCACTCTTCAGGAGTTCTCTGAGGCCCAGGTATCTCCTAACCCTTTCAGAGTGTCTAGTTCCTCCTaGATCTTTCTCTGTACCCTA | + |
|
Preference number: 4 (lower is better) Translates to: QSTLQEFSEAQVSPNPFRVSSSS*IFLCTL Trigger: TAGGGTACAGAGAAAGATCCAGGAGGAACTAGACAC...TCTGAAAGGGTTAGGAGATACCTGGGCCTCAGAGAACTCCTGAAGAGTGCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS-3UTR CCA 90 bp | GTCCCAGGATCTGTGTTTCTGGCTAAAGTTGAATCACAGGAACAGCCACCTGGTAGACACAGCACCCCTTaGGGATATAGAAGCCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: VPGSVFLAKVESQEQPPGRHSTP*GYRSHS Trigger: TGAATGGCTTCTATATCCCCAAGGGGTGCTGTGTCT...ACCAGGTGGCTGTTCCTGTGATTCAACTTTAGCCAGAAACACAGATCCTGGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| 3UTR CAA 72 bp | CTGGTTTTACTGCCCAGAGAATCTCTCCCTCTGTTCTaGGGTCTTTCTAGACACAAGTCTCAACCCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LVLLPRESLPLF*GLSRHKSQPFL Trigger: CAGGAAGGGTTGAGACTTGTGTCTAGAAAGACCCAAGAACAGAGGGAGAGATTCTCTGGGCAGTAAAACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS-3UTR TCA 90 bp | TTATACAGTAAAGAAGAGAGACCAAGAGCTGATGCAGTAGTCTATGACTGTATCTCAGCATGTGACCAATaGAGGGCAAGCCCCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LYSKEERPRADAVVYDCISACDQ*RASPRA Trigger: GGCCCTGGGGCTTGCCCTTCATTGGTCACATGCTGA...GATACAGTCATAGACTACTGCATCAGCTCTTGGTCTCTCTTCTTTACTGTATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS-3UTR TCA 90 bp | TACTGCCCAGAGAATCTCTCCCTCTGTTCTTGGGTCTTTCTAGACACAAGTCTCAGCATATGGCACAGATaGCATTGGCTACTGACACGA | + |
|
Preference number: 4 (lower is better) Translates to: YCPENLSLCSWVFLDTSLSIWHR*HWLLTR Trigger: TCGTGTCAGTAGCCAATGTCATCTGTGCCATATGCT...GAGACTTGTGTCTAGAAAGACCCAAGAACAGAGGGAGAGATTCTCTGGGCAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS-3UTR GCA 90 bp | CCAAGGCCTCCTTTGGTAGCAAGTTCAGAGTCAGCCTGGGCTACACAAGACTCTTTAAATTCTATTTGCTaGAGCAAGATGGCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PRPPLVASSESAWATQDSLNSIC*SKMARK Trigger: CTTCCTGGCCATCTTGCTGCAGCAAATAGAATTTAA...AGAGTCTTGTGTAGCCCAGGCTGACTCTGAACTTGCTACCAAAGGAGGCCTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS-3UTR GCA 90 bp | CAGAGCACTCTTCAGGAGTTCTCTGAGGCCCAGGTATCTCCTAACCCTTTCAGAACCTTAAATTCTATTTaGTGCAGCAAGATGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QSTLQEFSEAQVSPNPFRTLNSI*CSKMAR Trigger: CCTGGCCATCTTGCTGCAGCAAATAGAATTTAAGGT...TCTGAAAGGGTTAGGAGATACCTGGGCCTCAGAGAACTCCTGAAGAGTGCTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS-3UTR CCA 90 bp | TACTGCCCAGAGAATCTCTCCCTCTGTTCTTGGGTCTTTCTAGACACAAGTCTCCACGGGTCCAGAGTCTaGGTTAAAAGTCATGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YCPENLSLCSWVFLDTSLHGSRV*VKSHAL Trigger: AAGAGCATGACTTTTAACCCAGACTCTGGACCCGTG...GAGACTTGTGTCTAGAAAGACCCAAGAACAGAGGGAGAGATTCTCTGGGCAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS-3UTR CCA 90 bp | TGCCAGAATTTTAAGCTGTCTTCTCCCTCCATTCTGGGCAGCTCCCACTTGTCAGTGTCTAGTTCCTCCTaGATCTTTCTCTGTACCCTA | + |
|
Preference number: 4 (lower is better) Translates to: CQNFKLSSPSILGSSHLSVSSSS*IFLCTL Trigger: TAGGGTACAGAGAAAGATCCAGGAGGAACTAGACAC...TGACAAGTGGGAGCTGCCCAGAATGGAGGGAGAAGACAGCTTAAAATTCTGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS-3UTR GCA 90 bp | GTCCCAGGATCTGTGTTTCTGGCTAAAGTTGAATCACAGGAACAGCCACCTGGTACCTTAAATTCTATTTaGTGCAGCAAGATGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VPGSVFLAKVESQEQPPGTLNSI*CSKMAR Trigger: CCTGGCCATCTTGCTGCAGCAAATAGAATTTAAGGT...ACCAGGTGGCTGTTCCTGTGATTCAACTTTAGCCAGAAACACAGATCCTGGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS-3UTR CCA 90 bp | GTAGTCTATGACTGTATCCTAGCACTTGGTAAGGTAGTAAGAACAACAACAACACCAGGAGCAGCTCTGTaGCTGACACGAAGGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VVYDCILALGKVVRTTTTPGAAL*LTRRLE Trigger: TTCCAGCCTTCGTGTCAGCCACAGAGCTGCTCCTGG...TGTTGTTGTTGTTCTTACTACCTTACCAAGTGCTAGGATACAGTCATAGACTAC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS-3UTR CCA 90 bp | TTATACAGTAAAGAAGAGAGACCAAGAGCTGATGCAGTAGTCTATGACTGTATCCCAGGAGCAGCTCTGTaGCTGACACGAAGGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LYSKEERPRADAVVYDCIPGAAL*LTRRLE Trigger: TTCCAGCCTTCGTGTCAGCCACAGAGCTGCTCCTGG...GATACAGTCATAGACTACTGCATCAGCTCTTGGTCTCTCTTCTTTACTGTATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS-3UTR TCA 90 bp | GTAGTCTATGACTGTATCCTAGCACTTGGTAAGGTAGTAAGAACAACAACAACAAGGTTCTTGTGGCTCTaGCCACCCAGAATCCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VVYDCILALGKVVRTTTTRFLWL*PPRIQG Trigger: GCCTTGGATTCTGGGTGGTCAGAGCCACAAGAACCT...TGTTGTTGTTGTTCTTACTACCTTACCAAGTGCTAGGATACAGTCATAGACTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS-3UTR GCA 90 bp | TGCCAGAATTTTAAGCTGTCTTCTCCCTCCATTCTGGGCAGCTCCCACTTGTCATTAAATTCTATTTGCTaGAGCAAGATGGCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CQNFKLSSPSILGSSHLSLNSIC*SKMARK Trigger: CTTCCTGGCCATCTTGCTGCAGCAAATAGAATTTAA...TGACAAGTGGGAGCTGCCCAGAATGGAGGGAGAAGACAGCTTAAAATTCTGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS-3UTR GCA 90 bp | GTAGTCTATGACTGTATCCTAGCACTTGGTAAGGTAGTAAGAACAACAACAACAGGGACGAAGGATGAATaGCGGAAGGTCTCCAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: VVYDCILALGKVVRTTTTGTKDE*RKVSRM Trigger: CATTCTGGAGACCTTCCGGCATTCATCCTTCGTCCC...TGTTGTTGTTGTTCTTACTACCTTACCAAGTGCTAGGATACAGTCATAGACTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS-3UTR GCA 90 bp | ATTTTATACAGTAAAGAAGAGAGACCAAGAGCTGATGCAGTAGTCTATGACTGTGGGACGAAGGATGAATaGCGGAAGGTCTCCAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: ILYSKEERPRADAVVYDCGTKDE*RKVSRM Trigger: CATTCTGGAGACCTTCCGGCATTCATCCTTCGTCCC...ACAGTCATAGACTACTGCATCAGCTCTTGGTCTCTCTTCTTTACTGTATAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS-3UTR GCA 90 bp | GTAGTCTATGACTGTATCCTAGCACTTGGTAAGGTAGTAAGAACAACAACAACACGGTCATGGTTAACCTaGCACTGGTTCACAAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: VVYDCILALGKVVRTTTTRSWLT*HWFTKT Trigger: TGTCTTTGTGAACCAGTGGCAGGTTAACCATGACCG...TGTTGTTGTTGTTCTTACTACCTTACCAAGTGCTAGGATACAGTCATAGACTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS-3UTR CCA 90 bp | TTATACAGTAAAGAAGAGAGACCAAGAGCTGATGCAGTAGTCTATGACTGTATCCACGGGTCCAGAGTCTaGGTTAAAAGTCATGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LYSKEERPRADAVVYDCIHGSRV*VKSHAL Trigger: AAGAGCATGACTTTTAACCCAGACTCTGGACCCGTG...GATACAGTCATAGACTACTGCATCAGCTCTTGGTCTCTCTTCTTTACTGTATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS-3UTR CCA 90 bp | GTAGTCTATGACTGTATCCTAGCACTTGGTAAGGTAGTAAGAACAACAACAACAAGACACAGCACCCCTTaGGGATATAGAAGCCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: VVYDCILALGKVVRTTTTRHSTP*GYRSHS Trigger: TGAATGGCTTCTATATCCCCAAGGGGTGCTGTGTCT...TGTTGTTGTTGTTCTTACTACCTTACCAAGTGCTAGGATACAGTCATAGACTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS TCA 90 bp | TCATCTGACAGCTGGACATTGGCATTCTCGTCCAGCTTCCTGTCCTaGCAATGCTCAATGAGGCTGTCTGTGATGTCCCGGATGTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SSDSWTLAFSSSFLS*QCSMRLSVMSRMWP Trigger: GGGCCACATCCGGGACATCACAGACAGCCTCATTGAGCATTGTCAGGACAGGAAGCTGGACGAGAATGCCAATGTCCAGCTGTCAGATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS-3UTR CAA 90 bp | CCAGAGAATCTCTCCCTCTGTTCTTGGGTCTTTCTAGACACAAGTCTCAACCCTAGGTCTGGCCGGCCCTaGAAGTCATCTCCCTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PENLSLCSWVFLDTSLNPRSGRP*KSSPCL Trigger: GAGGCAGGGAGATGACTTCAAGGGCCGGCCAGACCT...AGGGTTGAGACTTGTGTCTAGAAAGACCCAAGAACAGAGGGAGAGATTCTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS-3UTR CAA 90 bp | TCCCAGGATCTGTGTTTCTGGCTAAAGTTGAATCACAGGAACAGCCACCTGGTCTCTGACAGCTGGACATaGGCATTCTCGTCCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SQDLCFWLKLNHRNSHLVSDSWT*AFSSSF Trigger: GAAGCTGGACGAGAATGCCAATGTCCAGCTGTCAGA...GACCAGGTGGCTGTTCCTGTGATTCAACTTTAGCCAGAAACACAGATCCTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS-3UTR CAA 90 bp | GTCCCAGGATCTGTGTTTCTGGCTAAAGTTGAATCACAGGAACAGCCACCTGGTTCTGACAGCTGGACATaGGCATTCTCGTCCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VPGSVFLAKVESQEQPPGSDSWT*AFSSSF Trigger: GAAGCTGGACGAGAATGCCAATGTCCAGCTGTCAGA...ACCAGGTGGCTGTTCCTGTGATTCAACTTTAGCCAGAAACACAGATCCTGGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS-3UTR CAA 90 bp | CAGAGCACTCTTCAGGAGTTCTCTGAGGCCCAGGTATCTCCTAACCCTTTCAGAATGGCACAGATGACATaGGCTACTGACACGACCAAA | + |
|
Preference number: 5 (lower is better) Translates to: QSTLQEFSEAQVSPNPFRMAQMT*ATDTTK Trigger: TTTGGTCGTGTCAGTAGCCAATGTCATCTGTGCCAT...TCTGAAAGGGTTAGGAGATACCTGGGCCTCAGAGAACTCCTGAAGAGTGCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS-3UTR CAA 90 bp | CTGCCCAGAGAATCTCTCCCTCTGTTCTTGGGTCTTTCTAGACACAAGTCTCAACTCTGTACCCTAGGGTaGGTTACCAGGTACATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LPRESLPLFLGLSRHKSQLCTLG*VTRYMR Trigger: CCTCATGTACCTGGTAACCAACCCTAGGGTACAGAG...TTGAGACTTGTGTCTAGAAAGACCCAAGAACAGAGGGAGAGATTCTCTGGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS-3UTR CAA 90 bp | TTATACAGTAAAGAAGAGAGACCAAGAGCTGATGCAGTAGTCTATGACTGTATCAGGTCTGGCCGGCCCTaGAAGTCATCTCCCTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LYSKEERPRADAVVYDCIRSGRP*KSSPCL Trigger: GAGGCAGGGAGATGACTTCAAGGGCCGGCCAGACCT...GATACAGTCATAGACTACTGCATCAGCTCTTGGTCTCTCTTCTTTACTGTATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS-3UTR CAA 90 bp | GGGCCTCTGCTGTGCCCAGTGTGTGTTCAGCATATAGAGAAACAAGTCCAAAGTACCTCCCCAAACTCATaGCTCAGATTGACTATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GPLLCPVCVQHIEKQVQSTSPNS*LRLTML Trigger: CAGCATAGTCAATCTGAGCAATGAGTTTGGGGAGGT...ACTTTGGACTTGTTTCTCTATATGCTGAACACACACTGGGCACAGCAGAGGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS-3UTR CAA 90 bp | GTCCCAGGATCTGTGTTTCTGGCTAAAGTTGAATCACAGGAACAGCCACCTGGTTTATCATTCAAGTCCTaGAAGGCATCCAGGGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VPGSVFLAKVESQEQPPGLSFKS*KASREE Trigger: CTCTTCCCTGGATGCCTTCAAGGACTTGAATGATAA...ACCAGGTGGCTGTTCCTGTGATTCAACTTTAGCCAGAAACACAGATCCTGGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS-3UTR CAA 90 bp | TCCCAGGATCTGTGTTTCTGGCTAAAGTTGAATCACAGGAACAGCCACCTGGTCAGAAGCCATTCAGACTaGTATCTCTTGTGGTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SQDLCFWLKLNHRNSHLVRSHSD*YLLWCC Trigger: ACAGCACCACAAGAGATACAAGTCTGAATGGCTTCT...GACCAGGTGGCTGTTCCTGTGATTCAACTTTAGCCAGAAACACAGATCCTGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS-3UTR CAA 90 bp | CCAGAGAATCTCTCCCTCTGTTCTTGGGTCTTTCTAGACACAAGTCTCAACCCTCACCTTAAATTCTATTaGCTGCAGCAAGATGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PENLSLCSWVFLDTSLNPHLKFY*LQQDGQ Trigger: CTGGCCATCTTGCTGCAGCAAATAGAATTTAAGGTG...AGGGTTGAGACTTGTGTCTAGAAAGACCCAAGAACAGAGGGAGAGATTCTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS-3UTR CAA 90 bp | GTAGTCTATGACTGTATCCTAGCACTTGGTAAGGTAGTAAGAACAACAACAACACTCTGTACCCTAGGGTaGGTTACCAGGTACATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VVYDCILALGKVVRTTTTLCTLG*VTRYMR Trigger: CCTCATGTACCTGGTAACCAACCCTAGGGTACAGAG...TGTTGTTGTTGTTCTTACTACCTTACCAAGTGCTAGGATACAGTCATAGACTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS-3UTR CAA 90 bp | TTATACAGTAAAGAAGAGAGACCAAGAGCTGATGCAGTAGTCTATGACTGTATCATGGCACAGATGACATaGGCTACTGACACGACCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LYSKEERPRADAVVYDCIMAQMT*ATDTTK Trigger: TTTGGTCGTGTCAGTAGCCAATGTCATCTGTGCCAT...GATACAGTCATAGACTACTGCATCAGCTCTTGGTCTCTCTTCTTTACTGTATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS-3UTR CAA 90 bp | TTATACAGTAAAGAAGAGAGACCAAGAGCTGATGCAGTAGTCTATGACTGTATCTTATCATTCAAGTCCTaGAAGGCATCCAGGGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LYSKEERPRADAVVYDCILSFKS*KASREE Trigger: CTCTTCCCTGGATGCCTTCAAGGACTTGAATGATAA...GATACAGTCATAGACTACTGCATCAGCTCTTGGTCTCTCTTCTTTACTGTATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS-3UTR CAA 90 bp | GTAGTCTATGACTGTATCCTAGCACTTGGTAAGGTAGTAAGAACAACAACAACAAGAAGCCATTCAGACTaGTATCTCTTGTGGTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VVYDCILALGKVVRTTTTRSHSD*YLLWCC Trigger: ACAGCACCACAAGAGATACAAGTCTGAATGGCTTCT...TGTTGTTGTTGTTCTTACTACCTTACCAAGTGCTAGGATACAGTCATAGACTAC 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS-3UTR CAA 90 bp | GTAGTCTATGACTGTATCCTAGCACTTGGTAAGGTAGTAAGAACAACAACAACACACCTTAAATTCTATTaGCTGCAGCAAGATGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VVYDCILALGKVVRTTTTHLKFY*LQQDGQ Trigger: CTGGCCATCTTGCTGCAGCAAATAGAATTTAAGGTG...TGTTGTTGTTGTTCTTACTACCTTACCAAGTGCTAGGATACAGTCATAGACTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS TCA 72 bp | TCTCACTCAAGCGCTTGTCCAGAGTGCCGCTGGGGGTaGGAAACCTTTCAGGCCGGAACTCGTTTGGGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: SHSSACPECRWG*ETFQAGTRLGH Trigger: GTGACCCAAACGAGTTCCGGCCTGAAAGGTTTCTCACCCCCAGCGGCACTCTGGACAAGCGCTTGAGTGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS TCA 72 bp | GCAGAATACGGTGACAGCCAGGAGCAGCTCTGTGGCTaGCACGAAGGCTGGAAGTCCATACATGGAAGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: AEYGDSQEQLCG*HEGWKSIHGRH Trigger: ATGCCTTCCATGTATGGACTTCCAGCCTTCGTGTCAGCCACAGAGCTGCTCCTGGCTGTCACCGTATTCTGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
||
| CDS TCA 72 bp | CTCCGATGCACTTTCGCTTGCCCAAACCAAAGAGAGTaGCCTTCTCACTCAAGCGCTTGTCCAGAGTGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: LRCTFACPNQRE*PSHSSACPECR Trigger: GCGGCACTCTGGACAAGCGCTTGAGTGAGAAGGTCACTCTCTTTGGTTTGGGCAAGCGAAAGTGCATCGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| CDS TCA 72 bp | AGCTGGACATTGGCATTCTCGTCCAGCTTCCTGTCCTaGCAATGCTCAATGAGGCTGTCTGTGATGTCCCGG | + |
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Preference number: 6 (lower is better) Translates to: SWTLAFSSSFLS*QCSMRLSVMSR Trigger: CCGGGACATCACAGACAGCCTCATTGAGCATTGTCAGGACAGGAAGCTGGACGAGAATGCCAATGTCCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| CDS CAA 72 bp | CCCAAACCAAAGAGAGTGACCTTCTCACTCAAGCGCTaGTCCAGAGTGCCGCTGGGGGTGAGAAACCTTTCA | + |
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Preference number: 6 (lower is better) Translates to: PKPKRVTFSLKR*SRVPLGVRNLS Trigger: TGAAAGGTTTCTCACCCCCAGCGGCACTCTGGACAAGCGCTTGAGTGAGAAGGTCACTCTCTTTGGTTTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| CDS CCA 72 bp | TGCCGATCTCTGCCAATCACTGTGTCTAGTTCCTCCTaGATCTTTCTCTGTACCCTAGGGTTGGTTACCAGG | + |
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Preference number: 6 (lower is better) Translates to: CRSLPITVSSSS*IFLCTLGLVTR Trigger: CCTGGTAACCAACCCTAGGGTACAGAGAAAGATCCAGGAGGAACTAGACACAGTGATTGGCAGAGATCGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| CDS CAA 72 bp | CCAGAGCCAGTAACCTCCCCAAACTCATTGCTCAGATaGACTATGCTGAGCAGCTCTTGGTCATCATGGTCA | + |
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Preference number: 6 (lower is better) Translates to: PEPVTSPNSLLR*TMLSSSWSSWS Trigger: TGACCATGATGACCAAGAGCTGCTCAGCATAGTCAATCTGAGCAATGAGTTTGGGGAGGTTACTGGCTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| CDS CAA 90 bp | AACCTCCCCAAACTCATTGCTCAGATTGACTATGCTGAGCAGCTCTaGGTCATCATGGTCATAACGTTGGCCAAAGCATATGGCACAGAT | + |
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Preference number: 6 (lower is better) Translates to: NLPKLIAQIDYAEQL*VIMVITLAKAYGTD Trigger: ATCTGTGCCATATGCTTTGGCCAACGTTATGACCATGATGACCAAGAGCTGCTCAGCATAGTCAATCTGAGCAATGAGTTTGGGGAGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| CDS CCA 72 bp | CAGCCCATAGGTAGGAGTCATATCCACCTTCTCCCCTaGAGACACCTTAAATTCTATTTGCTGCAGCAAGAT | + |
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Preference number: 6 (lower is better) Translates to: QPIGRSHIHLLP*RHLKFYLLQQD Trigger: ATCTTGCTGCAGCAAATAGAATTTAAGGTGTCTCCAGGGGAGAAGGTGGATATGACTCCTACCTATGGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| CDS CAA 72 bp | TATGCTGAGCAGCTCTTGGTCATCATGGTCATAACGTaGGCCAAAGCATATGGCACAGATGACATTGGCTAC | + |
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Preference number: 6 (lower is better) Translates to: YAEQLLVIMVIT*AKAYGTDDIGY Trigger: GTAGCCAATGTCATCTGTGCCATATGCTTTGGCCAACGTTATGACCATGATGACCAAGAGCTGCTCAGCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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| CDS TCA 72 bp | CATGGTCATAACGTTGGCCAAAGCATATGGCACAGATaGCATTGGCTACTGACACGACCAAATACTTGTAAG | + |
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Preference number: 6 (lower is better) Translates to: HGHNVGQSIWHR*HWLLTRPNTCK Trigger: CTTACAAGTATTTGGTCGTGTCAGTAGCCAATGTCATCTGTGCCATATGCTTTGGCCAACGTTATGACCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034865.6 ENSMUST00000216433.2 |
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