Pregenerated sensors for CYP19A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032274Ensembl transcript IDs: ENSMUST00000034811.8, ENSMUST00000215736.2
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGCTTCAGTTTCTTCACTGGTCCCCAACACAGACTCCTTTCTTTTaGATCCTGGCTCCCTGGATGGATGCCCAGCTTGATGACAAACCA | + |
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Preference number: 1 (lower is better) Translates to: RLQFLHWSPTQTPFF*ILAPWMDAQLDDKP Trigger: TGGTTTGTCATCAAGCTGGGCATCCATCCAGGGAGCCAGGATGCAAAAGAAAGGAGTCTGTGTTGGGGACCAGTGAAGAAACTGAAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| 3UTR CCA 90 bp | GGTCCCCAACACAGACTCCTTTCTTTTGCATCCTGGCTCCCTGGATaGATGCCCAGCTTGATGACAAACCATAGGAGCTATGATCATAAA | + |
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Preference number: 1 (lower is better) Translates to: GPQHRLLSFASWLPG*MPSLMTNHRSYDHK Trigger: TTTATGATCATAGCTCCTATGGTTTGTCATCAAGCTGGGCATCCATCCAGGGAGCCAGGATGCAAAAGAAAGGAGTCTGTGTTGGGGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| 3UTR CCA 90 bp | GGTATATATTGTAGGATTGGTCCTTTAAGGCTTCAGTTTCTTCACTaGTCCCCAACACAGACTCCTTTCTTTTGCATCCTGGCTCCCTGG | + |
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Preference number: 1 (lower is better) Translates to: GIYCRIGPLRLQFLH*SPTQTPFFCILAPW Trigger: CCAGGGAGCCAGGATGCAAAAGAAAGGAGTCTGTGTTGGGGACCAGTGAAGAAACTGAAGCCTTAAAGGACCAATCCTACAATATATACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| 3UTR-3UTR CCA 90 bp | AGTACACACACAGACTTGCATACGTACATGGCACATGCTTGTGGGCGCGCACGCCTTCAGTTTCTTCACTaGTCCCCAACACAGACTCCT | + |
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Preference number: 2 (lower is better) Translates to: STHTDLHTYMAHACGRARLQFLH*SPTQTP Trigger: AGGAGTCTGTGTTGGGGACCAGTGAAGAAACTGAAG...GCGTGCGCGCCCACAAGCATGTGCCATGTACGTATGCAAGTCTGTGTGTGTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| 3UTR CAA 90 bp | CGCACACACACACACACACACACACACACACATATGAAAGTCCTGTaGTTCATTTATGCCTGGCCCACATGCTGGGATGTTGACCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: RTHTHTHTHTHMKVL*FIYAWPTCWDVDLA Trigger: GGCCAGGTCAACATCCCAGCATGTGGGCCAGGCATAAATGAACAACAGGACTTTCATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| 3UTR-3UTR CCA 90 bp | CGATGTGCTGACAACAGCTGTAGAACTCTAGCAGGAGACCAGACGTGTTTTACTTGCATCCTGGCTCCCTaGATGGATGCCCAGCTTGAT | + |
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Preference number: 2 (lower is better) Translates to: RCADNSCRTLAGDQTCFTCILAP*MDAQLD Trigger: ATCAAGCTGGGCATCCATCCAGGGAGCCAGGATGCA...AGTAAAACACGTCTGGTCTCCTGCTAGAGTTCTACAGCTGTTGTCAGCACATCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| 3UTR-3UTR CCA 90 bp | AGTACACACACAGACTTGCATACGTACATGGCACATGCTTGTGGGCGCGCACGCTTGTTCATTTATGCCTaGCCCACATGCTGGGATGTT | + |
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Preference number: 2 (lower is better) Translates to: STHTDLHTYMAHACGRARLFIYA*PTCWDV Trigger: AACATCCCAGCATGTGGGCCAGGCATAAATGAACAA...GCGTGCGCGCCCACAAGCATGTGCCATGTACGTATGCAAGTCTGTGTGTGTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| 3UTR-3UTR CCA 90 bp | ACACACACACACACACACACATATGAAAGTCCTGTTGTTCATTTATGCCTGGCCTGCATCCTGGCTCCCTaGATGGATGCCCAGCTTGAT | + |
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Preference number: 2 (lower is better) Translates to: THTHTHTYESPVVHLCLACILAP*MDAQLD Trigger: ATCAAGCTGGGCATCCATCCAGGGAGCCAGGATGCA...GGCCAGGCATAAATGAACAACAGGACTTTCATATGTGTGTGTGTGTGTGTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| 3UTR-3UTR TCA 90 bp | AGTACACACACAGACTTGCATACGTACATGGCACATGCTTGTGGGCGCGCACGCACACACACACACATATaGAAGTCCTGTTGTTCATTT | + |
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Preference number: 2 (lower is better) Translates to: STHTDLHTYMAHACGRARTHTHI*KSCCSF Trigger: AAATGAACAACAGGACTTTCATATGTGTGTGTGTGT...GCGTGCGCGCCCACAAGCATGTGCCATGTACGTATGCAAGTCTGTGTGTGTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| 3UTR-3UTR CCA 90 bp | TACTACAGTCTAACTACACTCCTGGGAGCACAAATTGAGAGTAAGAAACGACACCTTTCTTTTGCATCCTaGCTCCCTGGATGGATGCCC | + |
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Preference number: 2 (lower is better) Translates to: YYSLTTLLGAQIESKKRHLSFAS*LPGWMP Trigger: GGGCATCCATCCAGGGAGCCAGGATGCAAAAGAAAG...GTGTCGTTTCTTACTCTCAATTTGTGCTCCCAGGAGTGTAGTTAGACTGTAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| 3UTR CAA 90 bp | AGACTCCTTTCTTTTGCATCCTGGCTCCCTGGATGGATGCCCAGCTaGATGACAAACCATAGGAGCTATGATCATAAAATTCTACAGACC | + |
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Preference number: 2 (lower is better) Translates to: RLLSFASWLPGWMPS*MTNHRSYDHKILQT Trigger: GGTCTGTAGAATTTTATGATCATAGCTCCTATGGTTTGTCATCAAGCTGGGCATCCATCCAGGGAGCCAGGATGCAAAAGAAAGGAGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| 3UTR-3UTR CCA 90 bp | TACTACAGTCTAACTACACTCCTGGGAGCACAAATTGAGAGTAAGAAACGACACCTTCAGTTTCTTCACTaGTCCCCAACACAGACTCCT | + |
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Preference number: 2 (lower is better) Translates to: YYSLTTLLGAQIESKKRHLQFLH*SPTQTP Trigger: AGGAGTCTGTGTTGGGGACCAGTGAAGAAACTGAAG...GTGTCGTTTCTTACTCTCAATTTGTGCTCCCAGGAGTGTAGTTAGACTGTAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| 3UTR GCA 72 bp | AAGTACACACACAGACTTGCATACGTACATGGCACATaGTTGTGGGCGCGCACGCGCGCGCGCACACACACA | + |
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Preference number: 3 (lower is better) Translates to: KYTHRLAYVHGT*LWARTRARTHT Trigger: TGTGTGTGTGCGCGCGCGCGTGCGCGCCCACAAGCATGTGCCATGTACGTATGCAAGTCTGTGTGTGTACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| 3UTR-3UTR CAA 90 bp | ACAAGTACACACACAGACTTGCATACGTACATGGCACATGCTTGTGGGCGCGCAACAGACTCCTTTCTTTaGCATCCTGGCTCCCTGGAT | + |
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Preference number: 3 (lower is better) Translates to: TSTHTDLHTYMAHACGRATDSFL*HPGSLD Trigger: ATCCAGGGAGCCAGGATGCAAAAGAAAGGAGTCTGT...TGCGCGCCCACAAGCATGTGCCATGTACGTATGCAAGTCTGTGTGTGTACTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| 3UTR GCA 72 bp | TTTCTTCACTGGTCCCCAACACAGACTCCTTTCTTTTaGATCCTGGCTCCCTGGATGGATGCCCAGCTTGAT | + |
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Preference number: 3 (lower is better) Translates to: FLHWSPTQTPFF*ILAPWMDAQLD Trigger: ATCAAGCTGGGCATCCATCCAGGGAGCCAGGATGCAAAAGAAAGGAGTCTGTGTTGGGGACCAGTGAAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| 3UTR CCA 72 bp | CACAGACTCCTTTCTTTTGCATCCTGGCTCCCTGGATaGATGCCCAGCTTGATGACAAACCATAGGAGCTAT | + |
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Preference number: 3 (lower is better) Translates to: HRLLSFASWLPG*MPSLMTNHRSY Trigger: ATAGCTCCTATGGTTTGTCATCAAGCTGGGCATCCATCCAGGGAGCCAGGATGCAAAAGAAAGGAGTCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| 3UTR TCA 72 bp | CGCGCACACACACACACACACACACACACACACATATaGAAGTCCTGTTGTTCATTTATGCCTGGCCCACAT | + |
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Preference number: 3 (lower is better) Translates to: RAHTHTHTHTHI*KSCCSFMPGPH Trigger: ATGTGGGCCAGGCATAAATGAACAACAGGACTTTCATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| 3UTR-3UTR CAA 90 bp | TACTACAGTCTAACTACACTCCTGGGAGCACAAATTGAGAGTAAGAAACGACACACAGACTCCTTTCTTTaGCATCCTGGCTCCCTGGAT | + |
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Preference number: 3 (lower is better) Translates to: YYSLTTLLGAQIESKKRHTDSFL*HPGSLD Trigger: ATCCAGGGAGCCAGGATGCAAAAGAAAGGAGTCTGT...GTGTCGTTTCTTACTCTCAATTTGTGCTCCCAGGAGTGTAGTTAGACTGTAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| 3UTR TCA 72 bp | GTTGTTCATTTATGCCTGGCCCACATGCTGGGATGTTaGCCTGGCCTTTCTAATAACTTAAGTACTTCTGCC | + |
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Preference number: 3 (lower is better) Translates to: VVHLCLAHMLGC*PGLSNNLSTSA Trigger: GGCAGAAGTACTTAAGTTATTAGAAAGGCCAGGTCAACATCCCAGCATGTGGGCCAGGCATAAATGAACAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| 3UTR-3UTR CAA 90 bp | TACTACAGTCTAACTACACTCCTGGGAGCACAAATTGAGAGTAAGAAACGACACCATATGAAAGTCCTGTaGTTCATTTATGCCTGGCCC | + |
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Preference number: 3 (lower is better) Translates to: YYSLTTLLGAQIESKKRHHMKVL*FIYAWP Trigger: GGGCCAGGCATAAATGAACAACAGGACTTTCATATG...GTGTCGTTTCTTACTCTCAATTTGTGCTCCCAGGAGTGTAGTTAGACTGTAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| 3UTR GCA 72 bp | ATTGAGAGTAAGAAACGACACCCTATATTTCACTTTTaGCCCCAAACAGTTTACATGTGGATCCACCGTAAG | + |
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Preference number: 3 (lower is better) Translates to: IESKKRHPIFHF*PQTVYMWIHRK Trigger: CTTACGGTGGATCCACATGTAAACTGTTTGGGGGCAAAAGTGAAATATAGGGTGTCGTTTCTTACTCTCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| CDS-3UTR GCA 90 bp | TTCTTCACTGGTCCCCAACACAGACTCCTTTCTTTTGCATCCTGGCTCCCTGGAACTGCAGCCCACGCTTaGTGCCGAATCGGGAGATGT | + |
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Preference number: 4 (lower is better) Translates to: FFTGPQHRLLSFASWLPGTAAHA*CRIGRC Trigger: ACATCTCCCGATTCGGCAGCAAGCGTGGGCTGCAGT...TCCAGGGAGCCAGGATGCAAAAGAAAGGAGTCTGTGTTGGGGACCAGTGAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| CDS-3UTR GCA 90 bp | TTCTTCACTGGTCCCCAACACAGACTCCTTTCTTTTGCATCCTGGCTCCCTGGATCTCATGCATGCCGATaGACTGCAGCCCACGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: FFTGPQHRLLSFASWLPGSHACR*TAAHAC Trigger: GCAAGCGTGGGCTGCAGTGCATCGGCATGCATGAGA...TCCAGGGAGCCAGGATGCAAAAGAAAGGAGTCTGTGTTGGGGACCAGTGAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| CDS-3UTR GCA 90 bp | TCTTTTGCATCCTGGCTCCCTGGATGGATGCCCAGCTTGATGACAAACCATAGGTGCCGTTCTCATGCATaGCGATGCACTGCAGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: SFASWLPGWMPSLMTNHRCRSHA*RCTAAH Trigger: GTGGGCTGCAGTGCATCGGCATGCATGAGAACGGCA...CCTATGGTTTGTCATCAAGCTGGGCATCCATCCAGGGAGCCAGGATGCAAAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| CDS-3UTR GCA 90 bp | TTTCTTCACTGGTCCCCAACACAGACTCCTTTCTTTTGCATCCTGGCTCCCTGGTGCCGTTCTCATGCATaGCGATGCACTGCAGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: FLHWSPTQTPFFCILAPWCRSHA*RCTAAH Trigger: GTGGGCTGCAGTGCATCGGCATGCATGAGAACGGCA...CCAGGGAGCCAGGATGCAAAAGAAAGGAGTCTGTGTTGGGGACCAGTGAAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| CDS-3UTR TCA 90 bp | ACAAGTACACACACAGACTTGCATACGTACATGGCACATGCTTGTGGGCGCGCAATCTGCCATGGGAAATaGGGGGCCCAATTCCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: TSTHTDLHTYMAHACGRAICHGK*GAQFPD Trigger: GTCTGGGAATTGGGCCCCTCATTTCCCATGGCAGAT...TGCGCGCCCACAAGCATGTGCCATGTACGTATGCAAGTCTGTGTGTGTACTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034811.8 |
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| CDS-3UTR TCA 90 bp | TTCAGTTTCTTCACTGGTCCCCAACACAGACTCCTTTCTTTTGCATCCTGGCTCGGAGTGGCATGGCACTaGCAGTCACAGTTTCCGGGA | + |
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Preference number: 4 (lower is better) Translates to: FSFFTGPQHRLLSFASWLGVAWH*QSQFPG Trigger: TCCCGGAAACTGTGACTGTCAGTGCCATGCCACTCC...GAGCCAGGATGCAAAAGAAAGGAGTCTGTGTTGGGGACCAGTGAAGAAACTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034811.8 |
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| CDS-3UTR GCA 90 bp | ACAAGTACACACACAGACTTGCATACGTACATGGCACATGCTTGTGGGCGCGCAATGATGCCGTTCTCATaGATGCCGATGCACTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: TSTHTDLHTYMAHACGRAMMPFS*MPMHCS Trigger: GCTGCAGTGCATCGGCATGCATGAGAACGGCATCAT...TGCGCGCCCACAAGCATGTGCCATGTACGTATGCAAGTCTGTGTGTGTACTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| CDS-3UTR GCA 90 bp | TTTCTTCACTGGTCCCCAACACAGACTCCTTTCTTTTGCATCCTGGCTCCCTGGATGATGCCGTTCTCATaGATGCCGATGCACTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: FLHWSPTQTPFFCILAPWMMPFS*MPMHCS Trigger: GCTGCAGTGCATCGGCATGCATGAGAACGGCATCAT...CCAGGGAGCCAGGATGCAAAAGAAAGGAGTCTGTGTTGGGGACCAGTGAAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| CDS-3UTR GCA 90 bp | TTTCGATGTGCTGACAACAGCTGTAGAACTCTAGCAGGAGACCAGACGTGTTTTACTGCAGCCCACGCTTaGTGCCGAATCGGGAGATGT | + |
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Preference number: 4 (lower is better) Translates to: FRCADNSCRTLAGDQTCFTAAHA*CRIGRC Trigger: ACATCTCCCGATTCGGCAGCAAGCGTGGGCTGCAGT...AAAACACGTCTGGTCTCCTGCTAGAGTTCTACAGCTGTTGTCAGCACATCGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| CDS-3UTR CCA 90 bp | AGTACACACACAGACTTGCATACGTACATGGCACATGCTTGTGGGCGCGCACGCCTGTGCTTCATGACATaGAACATGCTTGAGGACTTG | + |
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Preference number: 4 (lower is better) Translates to: STHTDLHTYMAHACGRARLCFMT*NMLEDL Trigger: CAAGTCCTCAAGCATGTTCCATGTCATGAAGCACAG...GCGTGCGCGCCCACAAGCATGTGCCATGTACGTATGCAAGTCTGTGTGTGTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| CDS-3UTR CCA 90 bp | TCCTGGCTCCCTGGATGGATGCCCAGCTTGATGACAAACCATAGGAGCTATGATGTGCCTGTCCTCATTTaGGTGCAAGGACAGGTCATT | + |
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Preference number: 4 (lower is better) Translates to: SWLPGWMPSLMTNHRSYDVPVLI*VQGQVI Trigger: AATGACCTGTCCTTGCACCCAAATGAGGACAGGCAC...ATCATAGCTCCTATGGTTTGTCATCAAGCTGGGCATCCATCCAGGGAGCCAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| CDS-3UTR CCA 90 bp | TCTTTTGCATCCTGGCTCCCTGGATGGATGCCCAGCTTGATGACAAACCATAGGCTTTCATCATCACCATaGCGATGTACTTCCCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: SFASWLPGWMPSLMTNHRLSSSP*RCTSQH Trigger: GTGCTGGGAAGTACATCGCCATGGTGATGATGAAAG...CCTATGGTTTGTCATCAAGCTGGGCATCCATCCAGGGAGCCAGGATGCAAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| CDS-3UTR TCA 90 bp | AGTACACACACAGACTTGCATACGTACATGGCACATGCTTGTGGGCGCGCACGCTTGGAGGTACTTGTCTaGATTCCTTGGAGAGAAAAT | + |
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Preference number: 4 (lower is better) Translates to: STHTDLHTYMAHACGRARLEVLV*IPWREN Trigger: ATTTTCTCTCCAAGGAATTCAGACAAGTACCTCCAA...GCGTGCGCGCCCACAAGCATGTGCCATGTACGTATGCAAGTCTGTGTGTGTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| CDS-3UTR GCA 90 bp | TACTACAGTCTAACTACACTCCTGGGAGCACAAATTGAGAGTAAGAAACGACACTCTCATGCATGCCGATaGACTGCAGCCCACGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: YYSLTTLLGAQIESKKRHSHACR*TAAHAC Trigger: GCAAGCGTGGGCTGCAGTGCATCGGCATGCATGAGA...GTGTCGTTTCTTACTCTCAATTTGTGCTCCCAGGAGTGTAGTTAGACTGTAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| CDS-3UTR GCA 90 bp | TTCAGTTTCTTCACTGGTCCCCAACACAGACTCCTTTCTTTTGCATCCTGGCTCCATGGTGTCAGGGGCTaGAATCAGCATCTCCAGTAT | + |
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Preference number: 4 (lower is better) Translates to: FSFFTGPQHRLLSFASWLHGVRG*NQHLQY Trigger: ATACTGGAGATGCTGATTGCAGCCCCTGACACCATG...GAGCCAGGATGCAAAAGAAAGGAGTCTGTGTTGGGGACCAGTGAAGAAACTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| CDS-3UTR CCA 90 bp | ACAAGTACACACACAGACTTGCATACGTACATGGCACATGCTTGTGGGCGCGCACTGTGCTTCATGACATaGAACATGCTTGAGGACTTG | + |
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Preference number: 4 (lower is better) Translates to: TSTHTDLHTYMAHACGRALCFMT*NMLEDL Trigger: CAAGTCCTCAAGCATGTTCCATGTCATGAAGCACAG...TGCGCGCCCACAAGCATGTGCCATGTACGTATGCAAGTCTGTGTGTGTACTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| CDS-3UTR CCA 90 bp | CGATGTGCTGACAACAGCTGTAGAACTCTAGCAGGAGACCAGACGTGTTTTACTGTGCCTGTCCTCATTTaGGTGCAAGGACAGGTCATT | + |
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Preference number: 4 (lower is better) Translates to: RCADNSCRTLAGDQTCFTVPVLI*VQGQVI Trigger: AATGACCTGTCCTTGCACCCAAATGAGGACAGGCAC...AGTAAAACACGTCTGGTCTCCTGCTAGAGTTCTACAGCTGTTGTCAGCACATCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| CDS-3UTR GCA 90 bp | TTTCTTCACTGGTCCCCAACACAGACTCCTTTCTTTTGCATCCTGGCTCCCTGGATGGTGACATTATACTaGATGGGGTTCAGCATTTCC | + |
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Preference number: 4 (lower is better) Translates to: FLHWSPTQTPFFCILAPWMVTLY*MGFSIS Trigger: GGAAATGCTGAACCCCATGCAGTATAATGTCACCAT...CCAGGGAGCCAGGATGCAAAAGAAAGGAGTCTGTGTTGGGGACCAGTGAAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034811.8 |
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| CDS-3UTR CCA 90 bp | AGTACACACACAGACTTGCATACGTACATGGCACATGCTTGTGGGCGCGCACGCCTTAAAGAAGATGTTTaGTTTGATGAGGAGAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: STHTDLHTYMAHACGRARLKEDV*FDEESL Trigger: CAAGCTCTCCTCATCAAACCAAACATCTTCTTTAAG...GCGTGCGCGCCCACAAGCATGTGCCATGTACGTATGCAAGTCTGTGTGTGTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| CDS-3UTR CCA 90 bp | TCATTTCGATGTGCTGACAACAGCTGTAGAACTCTAGCAGGAGACCAGACGTGTCTTTCATCATCACCATaGCGATGTACTTCCCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: SFRCADNSCRTLAGDQTCLSSSP*RCTSQH Trigger: GTGCTGGGAAGTACATCGCCATGGTGATGATGAAAG...ACACGTCTGGTCTCCTGCTAGAGTTCTACAGCTGTTGTCAGCACATCGAAATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| CDS-3UTR TCA 90 bp | TTCAGTTTCTTCACTGGTCCCCAACACAGACTCCTTTCTTTTGCATCCTGGCTCGACATGGAACATGCTTaGGGACTTGCTGATAATGAG | + |
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Preference number: 4 (lower is better) Translates to: FSFFTGPQHRLLSFASWLDMEHA*GLADNE Trigger: CTCATTATCAGCAAGTCCTCAAGCATGTTCCATGTC...GAGCCAGGATGCAAAAGAAAGGAGTCTGTGTTGGGGACCAGTGAAGAAACTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| CDS-3UTR GCA 90 bp | AACGACACCCTATATTTCACTTTTGCCCCCAAACAGTTTACATGTGGATCCACCCATGGTGTCAGGGGCTaGAATCAGCATCTCCAGTAT | + |
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Preference number: 4 (lower is better) Translates to: NDTLYFTFAPKQFTCGSTHGVRG*NQHLQY Trigger: ATACTGGAGATGCTGATTGCAGCCCCTGACACCATG...GGTGGATCCACATGTAAACTGTTTGGGGGCAAAAGTGAAATATAGGGTGTCGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| CDS-3UTR CCA 90 bp | TACTACAGTCTAACTACACTCCTGGGAGCACAAATTGAGAGTAAGAAACGACACCATGATCAGCAGGAGTaGCATGGCACTGACAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: YYSLTTLLGAQIESKKRHHDQQE*HGTDSH Trigger: GTGACTGTCAGTGCCATGCCACTCCTGCTGATCATG...GTGTCGTTTCTTACTCTCAATTTGTGCTCCCAGGAGTGTAGTTAGACTGTAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034811.8 |
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| CDS-3UTR GCA 90 bp | TTCAGTTTCTTCACTGGTCCCCAACACAGACTCCTTTCTTTTGCATCCTGGCTCTCTTATTGTAGTAGTTaGAGGCACTTCCAATCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FSFFTGPQHRLLSFASWLSYCSS*RHFQSP Trigger: TGGGGATTGGAAGTGCCTGCAACTACTACAATAAGA...GAGCCAGGATGCAAAAGAAAGGAGTCTGTGTTGGGGACCAGTGAAGAAACTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| CDS-3UTR GCA 90 bp | ACACACACACACACACACACATATGAAAGTCCTGTTGTTCATTTATGCCTGGCCGATCTCCTTCAGGATTaGTGCTTCGACCTCTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTYESPVVHLCLADLLQD*CFDLWI Trigger: TATCCAGAGGTCGAAGCAGCAATCCTGAAGGAGATC...GGCCAGGCATAAATGAACAACAGGACTTTCATATGTGTGTGTGTGTGTGTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| 3UTR CAA 72 bp | ACACACACACACACACACACACATATGAAAGTCCTGTaGTTCATTTATGCCTGGCCCACATGCTGGGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHMKVL*FIYAWPTCWDV Trigger: AACATCCCAGCATGTGGGCCAGGCATAAATGAACAACAGGACTTTCATATGTGTGTGTGTGTGTGTGTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| CDS-3UTR TCA 90 bp | ACACACACACACACACACACATATGAAAGTCCTGTTGTTCATTTATGCCTGGCCGACATGGAACATGCTTaGGGACTTGCTGATAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTYESPVVHLCLADMEHA*GLADNE Trigger: CTCATTATCAGCAAGTCCTCAAGCATGTTCCATGTC...GGCCAGGCATAAATGAACAACAGGACTTTCATATGTGTGTGTGTGTGTGTGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| CDS-3UTR GCA 90 bp | TTTCGATGTGCTGACAACAGCTGTAGAACTCTAGCAGGAGACCAGACGTGTTTTTCTTATTGTAGTAGTTaGAGGCACTTCCAATCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FRCADNSCRTLAGDQTCFSYCSS*RHFQSP Trigger: TGGGGATTGGAAGTGCCTGCAACTACTACAATAAGA...AAAACACGTCTGGTCTCCTGCTAGAGTTCTACAGCTGTTGTCAGCACATCGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| CDS-3UTR CCA 90 bp | TTTCGATGTGCTGACAACAGCTGTAGAACTCTAGCAGGAGACCAGACGTGTTTTTGCAGTGTCTTCACCTaGAATCGTCTCAAAAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: FRCADNSCRTLAGDQTCFCSVFT*NRLKSV Trigger: TACACTTTTGAGACGATTCCAGGTGAAGACACTGCA...AAAACACGTCTGGTCTCCTGCTAGAGTTCTACAGCTGTTGTCAGCACATCGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| 3UTR CAA 72 bp | TCTTTTGCATCCTGGCTCCCTGGATGGATGCCCAGCTaGATGACAAACCATAGGAGCTATGATCATAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: SFASWLPGWMPS*MTNHRSYDHKI Trigger: AATTTTATGATCATAGCTCCTATGGTTTGTCATCAAGCTGGGCATCCATCCAGGGAGCCAGGATGCAAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| CDS-3UTR GCA 90 bp | TGGATGCCCAGCTTGATGACAAACCATAGGAGCTATGATCATAAAATTCTACAGGATCTCCTTCAGGATTaGTGCTTCGACCTCTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: WMPSLMTNHRSYDHKILQDLLQD*CFDLWI Trigger: TATCCAGAGGTCGAAGCAGCAATCCTGAAGGAGATC...CTGTAGAATTTTATGATCATAGCTCCTATGGTTTGTCATCAAGCTGGGCATCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| CDS-3UTR GCA 90 bp | TACTACAGTCTAACTACACTCCTGGGAGCACAAATTGAGAGTAAGAAACGACACCTGTCCTCATTTGGGTaGAAGGACAGGTCATTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: YYSLTTLLGAQIESKKRHLSSFG*KDRSFF Trigger: AAAGAATGACCTGTCCTTGCACCCAAATGAGGACAG...GTGTCGTTTCTTACTCTCAATTTGTGCTCCCAGGAGTGTAGTTAGACTGTAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| CDS-3UTR CCA 90 bp | CGATGTGCTGACAACAGCTGTAGAACTCTAGCAGGAGACCAGACGTGTTTTACTCTTAAAGAAGATGTTTaGTTTGATGAGGAGAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RCADNSCRTLAGDQTCFTLKEDV*FDEESL Trigger: CAAGCTCTCCTCATCAAACCAAACATCTTCTTTAAG...AGTAAAACACGTCTGGTCTCCTGCTAGAGTTCTACAGCTGTTGTCAGCACATCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| CDS-3UTR CCA 90 bp | ACACACACACACACACACACACATATGAAAGTCCTGTTGTTCATTTATGCCTGGAAGTCCACAACAGGCTaGTACCGCATGCTTTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHMKVLLFIYAWKSTTG*YRMLSL Trigger: TAATGAAAGCATGCGGTACCAGCCTGTTGTGGACTT...CCAGGCATAAATGAACAACAGGACTTTCATATGTGTGTGTGTGTGTGTGTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| CDS-3UTR CCA 90 bp | AACGACACCCTATATTTCACTTTTGCCCCCAAACAGTTTACATGTGGATCCACCTGCAGTGTCTTCACCTaGAATCGTCTCAAAAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: NDTLYFTFAPKQFTCGSTCSVFT*NRLKSV Trigger: TACACTTTTGAGACGATTCCAGGTGAAGACACTGCA...GGTGGATCCACATGTAAACTGTTTGGGGGCAAAAGTGAAATATAGGGTGTCGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| CDS-3UTR CCA 90 bp | TGGATGCCCAGCTTGATGACAAACCATAGGAGCTATGATCATAAAATTCTACAGAAGTCCACAACAGGCTaGTACCGCATGCTTTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: WMPSLMTNHRSYDHKILQKSTTG*YRMLSL Trigger: TAATGAAAGCATGCGGTACCAGCCTGTTGTGGACTT...CTGTAGAATTTTATGATCATAGCTCCTATGGTTTGTCATCAAGCTGGGCATCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| CDS-3UTR GCA 90 bp | CAAACCATAGGAGCTATGATCATAAAATTCTACAGACCATCAAATGTTCATGGTCTGTCCTCATTTGGGTaGAAGGACAGGTCATTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QTIGAMIIKFYRPSNVHGLSSFG*KDRSFF Trigger: AAAGAATGACCTGTCCTTGCACCCAAATGAGGACAG...ACCATGAACATTTGATGGTCTGTAGAATTTTATGATCATAGCTCCTATGGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| CDS-3UTR CAA 90 bp | ACAAGTACACACACAGACTTGCATACGTACATGGCACATGCTTGTGGGCGCGCACACTGCAGCCCACGCTaGCTGCCGAATCGGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: TSTHTDLHTYMAHACGRAHCSPR*LPNREM Trigger: CATCTCCCGATTCGGCAGCAAGCGTGGGCTGCAGTG...TGCGCGCCCACAAGCATGTGCCATGTACGTATGCAAGTCTGTGTGTGTACTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| CDS GCA 90 bp | GTTCTCCAAAGGCTCGGGTTGTTGTTAAATATGATGCCGTTCTCATaGATGCCGATGCACTGCAGCCCACGCTTGCTGCCGAATCGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VLQRLGLLLNMMPFS*MPMHCSPRLLPNRE Trigger: CTCCCGATTCGGCAGCAAGCGTGGGCTGCAGTGCATCGGCATGCATGAGAACGGCATCATATTTAACAACAACCCGAGCCTTTGGAGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| CDS TCA 90 bp | TGCAGGCACTTCCAATCCCCATCCACAAGAATCTGCCATGGGAAATaGGGGGCCCAATTCCCAGACAGTAGCCAGGACCTGGTATTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CRHFQSPSTRICHGK*GAQFPDSSQDLVLK Trigger: CTTCAATACCAGGTCCTGGCTACTGTCTGGGAATTGGGCCCCTCATTTCCCATGGCAGATTCTTGTGGATGGGGATTGGAAGTGCCTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034811.8 |
||
| CDS-3UTR CAA 90 bp | TCCTGGCTCCCTGGATGGATGCCCAGCTTGATGACAAACCATAGGAGCTATGATGGTGCCTGTCCTCATTaGGGTGCAAGGACAGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: SWLPGWMPSLMTNHRSYDGACPH*GARTGH Trigger: ATGACCTGTCCTTGCACCCAAATGAGGACAGGCACC...ATCATAGCTCCTATGGTTTGTCATCAAGCTGGGCATCCATCCAGGGAGCCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| CDS TCA 90 bp | ACCGACATGGTGTCAGGGGCTGCAATCAGCATCTCCAGTATGCACTaGTTCACGTTCTCTTTCGTCAGGTCTCCACGTCTCTCAGCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: TDMVSGAAISISSMH*FTFSFVRSPRLSAK Trigger: TTTCGCTGAGAGACGTGGAGACCTGACGAAAGAGAACGTGAATCAGTGCATACTGGAGATGCTGATTGCAGCCCCTGACACCATGTCGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| CDS-3UTR CAA 90 bp | ACACACACACACACACACACATATGAAAGTCCTGTTGTTCATTTATGCCTGGCCCACTGCAGCCCACGCTaGCTGCCGAATCGGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: THTHTHTYESPVVHLCLAHCSPR*LPNREM Trigger: CATCTCCCGATTCGGCAGCAAGCGTGGGCTGCAGTG...GGCCAGGCATAAATGAACAACAGGACTTTCATATGTGTGTGTGTGTGTGTGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| CDS-3UTR CAA 90 bp | TTTCTTCACTGGTCCCCAACACAGACTCCTTTCTTTTGCATCCTGGCTCCCTGGGGATCTCCTTCAGGATaGCTGCTTCGACCTCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: FLHWSPTQTPFFCILAPWGSPSG*LLRPLD Trigger: ATCCAGAGGTCGAAGCAGCAATCCTGAAGGAGATCC...CCAGGGAGCCAGGATGCAAAAGAAAGGAGTCTGTGTTGGGGACCAGTGAAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| CDS-3UTR CAA 90 bp | AGTACACACACAGACTTGCATACGTACATGGCACATGCTTGTGGGCGCGCACGCTCAGCTGTGGAAACTTaGTGTCTCTTCTTTTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: STHTDLHTYMAHACGRARSAVET*CLFFST Trigger: GGTGGAAAAGAAGAGACACAAAGTTTCCACAGCTGA...GCGTGCGCGCCCACAAGCATGTGCCATGTACGTATGCAAGTCTGTGTGTGTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| CDS-3UTR CAA 90 bp | CGATGTGCTGACAACAGCTGTAGAACTCTAGCAGGAGACCAGACGTGTTTTACTGGTGCCTGTCCTCATTaGGGTGCAAGGACAGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: RCADNSCRTLAGDQTCFTGACPH*GARTGH Trigger: ATGACCTGTCCTTGCACCCAAATGAGGACAGGCACC...AGTAAAACACGTCTGGTCTCCTGCTAGAGTTCTACAGCTGTTGTCAGCACATCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| CDS-3UTR CAA 90 bp | TTTCTTCACTGGTCCCCAACACAGACTCCTTTCTTTTGCATCCTGGCTCCCTGGTTTGATGAGGAGAGCTaGCCAGGCGTTAAAGTAACC | + |
|
Preference number: 5 (lower is better) Translates to: FLHWSPTQTPFFCILAPWFDEES*PGVKVT Trigger: GGTTACTTTAACGCCTGGCAAGCTCTCCTCATCAAA...CCAGGGAGCCAGGATGCAAAAGAAAGGAGTCTGTGTTGGGGACCAGTGAAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| CDS-3UTR CAA 90 bp | TTCTTCACTGGTCCCCAACACAGACTCCTTTCTTTTGCATCCTGGCTCCCTGGATTTGATGAGGAGAGCTaGCCAGGCGTTAAAGTAACC | + |
|
Preference number: 5 (lower is better) Translates to: FFTGPQHRLLSFASWLPGFDEES*PGVKVT Trigger: GGTTACTTTAACGCCTGGCAAGCTCTCCTCATCAAA...TCCAGGGAGCCAGGATGCAAAAGAAAGGAGTCTGTGTTGGGGACCAGTGAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| CDS-3UTR CAA 90 bp | TTCAGTTTCTTCACTGGTCCCCAACACAGACTCCTTTCTTTTGCATCCTGGCTCCGGTCCAAATGCTGCTaGATGGACTCCACACAAACT | + |
|
Preference number: 5 (lower is better) Translates to: FSFFTGPQHRLLSFASWLRSKCC*MDSTQT Trigger: AGTTTGTGTGGAGTCCATCAAGCAGCATTTGGACCG...GAGCCAGGATGCAAAAGAAAGGAGTCTGTGTTGGGGACCAGTGAAGAAACTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| CDS TCA 90 bp | GAATCGGGAGATGTAGTGACTGTGCTTCATGACATGGAACATGCTTaGGGACTTGCTGATAATGAGTGTCTCCTCTCCACTGATCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: ESGDVVTVLHDMEHA*GLADNECLLSTDPD Trigger: GTCTGGATCAGTGGAGAGGAGACACTCATTATCAGCAAGTCCTCAAGCATGTTCCATGTCATGAAGCACAGTCACTACATCTCCCGATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| CDS CCA 90 bp | TTTTGGATATCCTCGATCTTTATGTCTCTGTCACCCACAACAGTGTaGATCTCCTTCAGGATTGCTGCTTCGACCTCTGGATACTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: FWISSIFMSLSPTTV*ISFRIAASTSGYSA Trigger: CGCAGAGTATCCAGAGGTCGAAGCAGCAATCCTGAAGGAGATCCACACTGTTGTGGGTGACAGAGACATAAAGATCGAGGATATCCAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| CDS-3UTR CAA 90 bp | AACGACACCCTATATTTCACTTTTGCCCCCAAACAGTTTACATGTGGATCCACCGGATCTCCTTCAGGATaGCTGCTTCGACCTCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: NDTLYFTFAPKQFTCGSTGSPSG*LLRPLD Trigger: ATCCAGAGGTCGAAGCAGCAATCCTGAAGGAGATCC...GGTGGATCCACATGTAAACTGTTTGGGGGCAAAAGTGAAATATAGGGTGTCGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| CDS-3UTR CAA 90 bp | TCATTTCGATGTGCTGACAACAGCTGTAGAACTCTAGCAGGAGACCAGACGTGTAACATGCTTGAGGACTaGCTGATAATGAGTGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SFRCADNSCRTLAGDQTCNMLED*LIMSVS Trigger: GGAGACACTCATTATCAGCAAGTCCTCAAGCATGTT...ACACGTCTGGTCTCCTGCTAGAGTTCTACAGCTGTTGTCAGCACATCGAAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| CDS-3UTR CAA 90 bp | TCCTGGCTCCCTGGATGGATGCCCAGCTTGATGACAAACCATAGGAGCTATGATTTCAATACACCTTTTTaGCAGTGTCTTCACCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SWLPGWMPSLMTNHRSYDFNTPF*QCLHLE Trigger: TTCCAGGTGAAGACACTGCAAAAAAGGTGTATTGAA...ATCATAGCTCCTATGGTTTGTCATCAAGCTGGGCATCCATCCAGGGAGCCAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| CDS-3UTR CAA 90 bp | AACGACACCCTATATTTCACTTTTGCCCCCAAACAGTTTACATGTGGATCCACCCACTGTTGGAGGTACTaGTCTGAATTCCTTGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: NDTLYFTFAPKQFTCGSTHCWRY*SEFLGE Trigger: CTCTCCAAGGAATTCAGACAAGTACCTCCAACAGTG...GGTGGATCCACATGTAAACTGTTTGGGGGCAAAAGTGAAATATAGGGTGTCGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| CDS-3UTR CAA 90 bp | TATTGTAGGATTGGTCCTTTAAGGCTTCAGTTTCTTCACTGGTCCCCAACACAGCACTGTTGGAGGTACTaGTCTGAATTCCTTGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: YCRIGPLRLQFLHWSPTQHCWRY*SEFLGE Trigger: CTCTCCAAGGAATTCAGACAAGTACCTCCAACAGTG...CTGTGTTGGGGACCAGTGAAGAAACTGAAGCCTTAAAGGACCAATCCTACAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| CDS-3UTR CAA 90 bp | TATTGTAGGATTGGTCCTTTAAGGCTTCAGTTTCTTCACTGGTCCCCAACACAGTCAGCTGTGGAAACTTaGTGTCTCTTCTTTTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: YCRIGPLRLQFLHWSPTQSAVET*CLFFST Trigger: GGTGGAAAAGAAGAGACACAAAGTTTCCACAGCTGA...CTGTGTTGGGGACCAGTGAAGAAACTGAAGCCTTAAAGGACCAATCCTACAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| CDS-3UTR CAA 90 bp | TTCAGTTTCTTCACTGGTCCCCAACACAGACTCCTTTCTTTTGCATCCTGGCTCTTCAATACACCTTTTTaGCAGTGTCTTCACCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: FSFFTGPQHRLLSFASWLFNTPF*QCLHLE Trigger: TTCCAGGTGAAGACACTGCAAAAAAGGTGTATTGAA...GAGCCAGGATGCAAAAGAAAGGAGTCTGTGTTGGGGACCAGTGAAGAAACTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| CDS GCA 90 bp | AGGTACTTGTCTGAATTCCTTGGAGAGAAAATTATTTCCACAAGGTaGCTGTCCTCATTTGGGTGCAAGGACAGGTCATTCTTTTTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: RYLSEFLGEKIISTR*LSSFGCKDRSFFFG Trigger: ACCGAAAAAGAATGACCTGTCCTTGCACCCAAATGAGGACAGGCACCTTGTGGAAATAATTTTCTCTCCAAGGAATTCAGACAAGTACCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| CDS-3UTR CAA 90 bp | TACTACAGTCTAACTACACTCCTGGGAGCACAAATTGAGAGTAAGAAACGACACAACATGCTTGAGGACTaGCTGATAATGAGTGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: YYSLTTLLGAQIESKKRHNMLED*LIMSVS Trigger: GGAGACACTCATTATCAGCAAGTCCTCAAGCATGTT...GTGTCGTTTCTTACTCTCAATTTGTGCTCCCAGGAGTGTAGTTAGACTGTAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| CDS-3UTR CAA 90 bp | ACACACACACACACACACACACATATGAAAGTCCTGTTGTTCATTTATGCCTGGCAAAGGCTCGGGTTGTaGTTAAATATGATGCCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: THTHTHTHMKVLLFIYAWQRLGL*LNMMPF Trigger: GAACGGCATCATATTTAACAACAACCCGAGCCTTTG...CCAGGCATAAATGAACAACAGGACTTTCATATGTGTGTGTGTGTGTGTGTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| CDS GCA 90 bp | TTTTCAAGGGTAAATTCATTGGGCTTAGGGAAGTACTCGAGCCTGTaGATTCTTCCGATGTTCAGAATGATGTTAGTTCCCTTTTTAACC | + |
|
Preference number: 5 (lower is better) Translates to: FSRVNSLGLGKYSSL*ILPMFRMMLVPFLT Trigger: GGTTAAAAAGGGAACTAACATCATTCTGAACATCGGAAGAATGCACAGGCTCGAGTACTTCCCTAAGCCCAATGAATTTACCCTTGAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| CDS CCA 90 bp | TCGTTCATACTTTCTGTAGAGCCAAGAAATCTTAAAGAAGATGTTTaGTTTGATGAGGAGAGCTTGCCAGGCGTTAAAGTAACCCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SFILSVEPRNLKEDV*FDEESLPGVKVTLD Trigger: ATCCAGGGTTACTTTAACGCCTGGCAAGCTCTCCTCATCAAACCAAACATCTTCTTTAAGATTTCTTGGCTCTACAGAAAGTATGAACGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| CDS-3UTR CAA 90 bp | CAAACCATAGGAGCTATGATCATAAAATTCTACAGACCATCAAATGTTCATGGTCGGTCCAAATGCTGCTaGATGGACTCCACACAAACT | + |
|
Preference number: 5 (lower is better) Translates to: QTIGAMIIKFYRPSNVHGRSKCC*MDSTQT Trigger: AGTTTGTGTGGAGTCCATCAAGCAGCATTTGGACCG...ACCATGAACATTTGATGGTCTGTAGAATTTTATGATCATAGCTCCTATGGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| CDS GCA 72 bp | CGTTCTCATGCATGCCGATGCACTGCAGCCCACGCTTaGTGCCGAATCGGGAGATGTAGTGACTGTGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: RSHACRCTAAHA*CRIGRCSDCAS Trigger: TGAAGCACAGTCACTACATCTCCCGATTCGGCAGCAAGCGTGGGCTGCAGTGCATCGGCATGCATGAGAACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| CDS GCA 72 bp | AGGCTCGGGTTGTTGTTAAATATGATGCCGTTCTCATaGATGCCGATGCACTGCAGCCCACGCTTGCTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: RLGLLLNMMPFS*MPMHCSPRLLP Trigger: CGGCAGCAAGCGTGGGCTGCAGTGCATCGGCATGCATGAGAACGGCATCATATTTAACAACAACCCGAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
||
| CDS TCA 72 bp | TTCCAATCCCCATCCACAAGAATCTGCCATGGGAAATaGGGGGCCCAATTCCCAGACAGTAGCCAGGACCTG | + |
|
Preference number: 6 (lower is better) Translates to: FQSPSTRICHGK*GAQFPDSSQDL Trigger: CAGGTCCTGGCTACTGTCTGGGAATTGGGCCCCTCATTTCCCATGGCAGATTCTTGTGGATGGGGATTGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034811.8 |
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| CDS TCA 72 bp | AGCCGTCAATTACGTCATCCTCCAGAGCTCTGCGCATaGCCAAGTCCACAACAGGCTGGTACCGCATGCTTT | + |
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Preference number: 6 (lower is better) Translates to: SRQLRHPPELCA*PSPQQAGTACF Trigger: AAAGCATGCGGTACCAGCCTGTTGTGGACTTGGTCATGCGCAGAGCTCTGGAGGATGACGTAATTGACGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| CDS CAA 72 bp | GTGTCGGTGACTTCGCCCAGCCGGTCCAAATGCTGCTaGATGGACTCCACACAAACTTCCACCATTCGAACA | + |
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Preference number: 6 (lower is better) Translates to: VSVTSPSRSKCC*MDSTQTSTIRT Trigger: TGTTCGAATGGTGGAAGTTTGTGTGGAGTCCATCAAGCAGCATTTGGACCGGCTGGGCGAAGTCACCGACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| CDS TCA 72 bp | GTGTCAGGGGCTGCAATCAGCATCTCCAGTATGCACTaGTTCACGTTCTCTTTCGTCAGGTCTCCACGTCTC | + |
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Preference number: 6 (lower is better) Translates to: VSGAAISISSMH*FTFSFVRSPRL Trigger: GAGACGTGGAGACCTGACGAAAGAGAACGTGAATCAGTGCATACTGGAGATGCTGATTGCAGCCCCTGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| CDS GCA 72 bp | TCTGTCACCCACAACAGTGTGGATCTCCTTCAGGATTaGTGCTTCGACCTCTGGATACTCTGCGACGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: SVTHNSVDLLQD*CFDLWILCDEK Trigger: CTTCTCGTCGCAGAGTATCCAGAGGTCGAAGCAGCAATCCTGAAGGAGATCCACACTGTTGTGGGTGACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| CDS CAA 72 bp | CTCTGTCACCCACAACAGTGTGGATCTCCTTCAGGATaGCTGCTTCGACCTCTGGATACTCTGCGACGAGAA | + |
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Preference number: 6 (lower is better) Translates to: LCHPQQCGSPSG*LLRPLDTLRRE Trigger: TTCTCGTCGCAGAGTATCCAGAGGTCGAAGCAGCAATCCTGAAGGAGATCCACACTGTTGTGGGTGACAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| CDS GCA 72 bp | ACATGGTGTCAGGGGCTGCAATCAGCATCTCCAGTATaGACTGATTCACGTTCTCTTTCGTCAGGTCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: TWCQGLQSASPV*TDSRSLSSGLH Trigger: GTGGAGACCTGACGAAAGAGAACGTGAATCAGTGCATACTGGAGATGCTGATTGCAGCCCCTGACACCATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| CDS CAA 72 bp | GGGGCCCAATTCCCAGACAGTAGCCAGGACCTGGTATaGAAGACGAGCTCTCACAATTCCAAATCAGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: GAQFPDSSQDLV*KTSSHNSKSGE Trigger: TTCTCCTGATTTGGAATTGTGAGAGCTCGTCTTCAATACCAGGTCCTGGCTACTGTCTGGGAATTGGGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034811.8 |
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| CDS GCA 72 bp | CATGAAGTACAGAGTGACCGACATGGTGTCAGGGGCTaGAATCAGCATCTCCAGTATGCACTGATTCACGTT | + |
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Preference number: 6 (lower is better) Translates to: HEVQSDRHGVRG*NQHLQYALIHV Trigger: AACGTGAATCAGTGCATACTGGAGATGCTGATTGCAGCCCCTGACACCATGTCGGTCACTCTGTACTTCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| CDS CAA 90 bp | GCTTTCATAAAGAAAGGGCGAATTGTTCTCCAAAGGCTCGGGTTGTaGTTAAATATGATGCCGTTCTCATGCATGCCGATGCACTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: AFIKKGRIVLQRLGL*LNMMPFSCMPMHCS Trigger: GCTGCAGTGCATCGGCATGCATGAGAACGGCATCATATTTAACAACAACCCGAGCCTTTGGAGAACAATTCGCCCTTTCTTTATGAAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| CDS CAA 90 bp | AGAGCTTTCATAAAGAAAGGGCGAATTGTTCTCCAAAGGCTCGGGTaGTTGTTAAATATGATGCCGTTCTCATGCATGCCGATGCACTGC | + |
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Preference number: 6 (lower is better) Translates to: RAFIKKGRIVLQRLG*LLNMMPFSCMPMHC Trigger: GCAGTGCATCGGCATGCATGAGAACGGCATCATATTTAACAACAACCCGAGCCTTTGGAGAACAATTCGCCCTTTCTTTATGAAAGCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| CDS TCA 72 bp | GATGTAGTGACTGTGCTTCATGACATGGAACATGCTTaGGGACTTGCTGATAATGAGTGTCTCCTCTCCACT | + |
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Preference number: 6 (lower is better) Translates to: DVVTVLHDMEHA*GLADNECLLST Trigger: AGTGGAGAGGAGACACTCATTATCAGCAAGTCCTCAAGCATGTTCCATGTCATGAAGCACAGTCACTACATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| CDS CAA 72 bp | AAGAAAGGGCGAATTGTTCTCCAAAGGCTCGGGTTGTaGTTAAATATGATGCCGTTCTCATGCATGCCGATG | + |
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Preference number: 6 (lower is better) Translates to: KKGRIVLQRLGL*LNMMPFSCMPM Trigger: CATCGGCATGCATGAGAACGGCATCATATTTAACAACAACCCGAGCCTTTGGAGAACAATTCGCCCTTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| CDS GCA 72 bp | GTAAATTCATTGGGCTTAGGGAAGTACTCGAGCCTGTaGATTCTTCCGATGTTCAGAATGATGTTAGTTCCC | + |
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Preference number: 6 (lower is better) Translates to: VNSLGLGKYSSL*ILPMFRMMLVP Trigger: GGGAACTAACATCATTCTGAACATCGGAAGAATGCACAGGCTCGAGTACTTCCCTAAGCCCAATGAATTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| CDS CAA 72 bp | ATAAAGAAAGGGCGAATTGTTCTCCAAAGGCTCGGGTaGTTGTTAAATATGATGCCGTTCTCATGCATGCCG | + |
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Preference number: 6 (lower is better) Translates to: IKKGRIVLQRLG*LLNMMPFSCMP Trigger: CGGCATGCATGAGAACGGCATCATATTTAACAACAACCCGAGCCTTTGGAGAACAATTCGCCCTTTCTTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| CDS CAA 90 bp | TCTCTTTCGTCAGGTCTCCACGTCTCTCAGCGAAAATCAAATCAGTaGCAAAATCCATACAGTCTTCCAGTTTCTCAGCTGTGGAAACTT | + |
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Preference number: 6 (lower is better) Translates to: SLSSGLHVSQRKSNQ*QNPYSLPVSQLWKL Trigger: AAGTTTCCACAGCTGAGAAACTGGAAGACTGTATGGATTTTGCAACTGATTTGATTTTCGCTGAGAGACGTGGAGACCTGACGAAAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| CDS CAA 72 bp | GAGAGAAAATTATTTCCACAAGGTGCCTGTCCTCATTaGGGTGCAAGGACAGGTCATTCTTTTTCGGTATGT | + |
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Preference number: 6 (lower is better) Translates to: ERKLFPQGACPH*GARTGHSFSVC Trigger: ACATACCGAAAAAGAATGACCTGTCCTTGCACCCAAATGAGGACAGGCACCTTGTGGAAATAATTTTCTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| CDS TCA 72 bp | TTTCCACCAAAACAGCTATCTCGTCTTTCAAGTCCTTaGCGGATCGTTCATACTTTCTGTAGAGCCAAGAAA | + |
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Preference number: 6 (lower is better) Translates to: FPPKQLSRLSSP*RIVHTFCRAKK Trigger: TTTCTTGGCTCTACAGAAAGTATGAACGATCCGTCAAGGACTTGAAAGACGAGATAGCTGTTTTGGTGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| CDS CCA 72 bp | AGAGAAAATTATTTCCACAAGGTGCCTGTCCTCATTTaGGTGCAAGGACAGGTCATTCTTTTTCGGTATGTT | + |
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Preference number: 6 (lower is better) Translates to: RENYFHKVPVLI*VQGQVILFRYV Trigger: AACATACCGAAAAAGAATGACCTGTCCTTGCACCCAAATGAGGACAGGCACCTTGTGGAAATAATTTTCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| CDS CAA 72 bp | GGAACATTCTTCTCAAAGTTTTCAAGGGTAAATTCATaGGGCTTAGGGAAGTACTCGAGCCTGTGCATTCTT | + |
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Preference number: 6 (lower is better) Translates to: GTFFSKFSRVNS*GLGKYSSLCIL Trigger: AAGAATGCACAGGCTCGAGTACTTCCCTAAGCCCAATGAATTTACCCTTGAAAACTTTGAGAAGAATGTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| CDS CAA 90 bp | GAGCCAAGAAATCTTAAAGAAGATGTTTGGTTTGATGAGGAGAGCTaGCCAGGCGTTAAAGTAACCCTGGATTTTCTTCACAATAGCACT | + |
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Preference number: 6 (lower is better) Translates to: EPRNLKEDVWFDEES*PGVKVTLDFLHNST Trigger: AGTGCTATTGTGAAGAAAATCCAGGGTTACTTTAACGCCTGGCAAGCTCTCCTCATCAAACCAAACATCTTCTTTAAGATTTCTTGGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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| CDS CCA 72 bp | CTTTCTGTAGAGCCAAGAAATCTTAAAGAAGATGTTTaGTTTGATGAGGAGAGCTTGCCAGGCGTTAAAGTA | + |
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Preference number: 6 (lower is better) Translates to: LSVEPRNLKEDV*FDEESLPGVKV Trigger: TACTTTAACGCCTGGCAAGCTCTCCTCATCAAACCAAACATCTTCTTTAAGATTTCTTGGCTCTACAGAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034811.8 ENSMUST00000215736.2 |
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