Pregenerated sensors for CYP17A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003555Ensembl transcript IDs: ENSMUST00000026012.8, ENSMUST00000236174.2
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGTCAAACCTCTGCAGCAGCAAGGCCATGAAGATAAAGAGCTCCTaGCGGGCCAGAGCCTCTCCAATGCACGATCGGGGACCAGCTCCG | + |
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Preference number: 1 (lower is better) Translates to: KSNLCSSKAMKIKSS*RARASPMHDRGPAP Trigger: CGGAGCTGGTCCCCGATCGTGCATTGGAGAGGCTCTGGCCCGGCAGGAGCTCTTTATCTTCATGGCCTTGCTGCTGCAGAGGTTTGACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
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| 3UTR TCA 90 bp | GACCACCTTGGGGTCACCCACCAGACAGGGCAGCTGTTTGTCATCTaGCACATCAAAGTCAAACCTCTGCAGCAGCAAGGCCATGAAGAT | + |
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Preference number: 1 (lower is better) Translates to: DHLGVTHQTGQLFVI*HIKVKPLQQQGHED Trigger: ATCTTCATGGCCTTGCTGCTGCAGAGGTTTGACTTTGATGTGTCAGATGACAAACAGCTGCCCTGTCTGGTGGGTGACCCCAAGGTGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
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| 3UTR GCA 90 bp | AGACAGGGCAGCTGTTTGTCATCTGACACATCAAAGTCAAACCTCTaGAGCAGCAAGGCCATGAAGATAAAGAGCTCCTGCCGGGCCAGA | + |
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Preference number: 1 (lower is better) Translates to: RQGSCLSSDTSKSNL*SSKAMKIKSSCRAR Trigger: TCTGGCCCGGCAGGAGCTCTTTATCTTCATGGCCTTGCTGCTGCAGAGGTTTGACTTTGATGTGTCAGATGACAAACAGCTGCCCTGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
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| 3UTR GCA 90 bp | AATGCCCCATCCAAGAGAAGAGGGACAGGCCTCTTGGGAGACAGATaGCTACATAATCCCTACAGAAGTTATTTGAAGAGGAAGTTGAAA | + |
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Preference number: 1 (lower is better) Translates to: NAPSKRRGTGLLGDR*LHNPYRSYLKRKLK Trigger: TTTCAACTTCCTCTTCAAATAACTTCTGTAGGGATTATGTAGGCATCTGTCTCCCAAGAGGCCTGTCCCTCTTCTCTTGGATGGGGCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
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| 3UTR CAA 90 bp | ATCAGAAAGACCACCTTGGGGTCACCCACCAGACAGGGCAGCTGTTaGTCATCTGACACATCAAAGTCAAACCTCTGCAGCAGCAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: IRKTTLGSPTRQGSC*SSDTSKSNLCSSKA Trigger: GGCCTTGCTGCTGCAGAGGTTTGACTTTGATGTGTCAGATGACAAACAGCTGCCCTGTCTGGTGGGTGACCCCAAGGTGGTCTTTCTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
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| 3UTR-3UTR GCA 90 bp | GTCAAACCTCTGCAGCAGCAAGGCCATGAAGATAAAGAGCTCCTGCCGGGCCAGCTCTTGGGAGACAGATaGCTACATAATCCCTACAGA | + |
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Preference number: 2 (lower is better) Translates to: VKPLQQQGHEDKELLPGQLLGDR*LHNPYR Trigger: TCTGTAGGGATTATGTAGGCATCTGTCTCCCAAGAG...CTGGCCCGGCAGGAGCTCTTTATCTTCATGGCCTTGCTGCTGCAGAGGTTTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
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| 3UTR CAA 90 bp | CGCACTGTGATTTTCACTTTGAAAGGGTCGATCAGAAAGACCACCTaGGGGTCACCCACCAGACAGGGCAGCTGTTTGTCATCTGACACA | + |
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Preference number: 2 (lower is better) Translates to: RTVIFTLKGSIRKTT*GSPTRQGSCLSSDT Trigger: TGTGTCAGATGACAAACAGCTGCCCTGTCTGGTGGGTGACCCCAAGGTGGTCTTTCTGATCGACCCTTTCAAAGTGAAAATCACAGTGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
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| 3UTR CAA 90 bp | TCAACCTGTGCATCCTTCCATGCTTGTCGCACTGTGATTTTCACTTaGAAAGGGTCGATCAGAAAGACCACCTTGGGGTCACCCACCAGA | + |
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Preference number: 2 (lower is better) Translates to: STCASFHACRTVIFT*KGSIRKTTLGSPTR Trigger: TCTGGTGGGTGACCCCAAGGTGGTCTTTCTGATCGACCCTTTCAAAGTGAAAATCACAGTGCGACAAGCATGGAAGGATGCACAGGTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
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| 3UTR-3UTR GCA 90 bp | GGCAGCTGTTTGTCATCTGACACATCAAAGTCAAACCTCTGCAGCAGCAAGGCCCTCACCCTTCATTGCTaGCAAGTAGAAAACGGGATA | + |
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Preference number: 2 (lower is better) Translates to: GSCLSSDTSKSNLCSSKALTLHC*QVENGI Trigger: TATCCCGTTTTCTACTTGGCAGCAATGAAGGGTGAG...GGCCTTGCTGCTGCAGAGGTTTGACTTTGATGTGTCAGATGACAAACAGCTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
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| 3UTR CAA 90 bp | ATTCGGCCTCTAGGTGCTAACCTCAACCTGTGCATCCTTCCATGCTaGTCGCACTGTGATTTTCACTTTGAAAGGGTCGATCAGAAAGAC | + |
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Preference number: 2 (lower is better) Translates to: IRPLGANLNLCILPC*SHCDFHFERVDQKD Trigger: GTCTTTCTGATCGACCCTTTCAAAGTGAAAATCACAGTGCGACAAGCATGGAAGGATGCACAGGTTGAGGTTAGCACCTAGAGGCCGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
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| 3UTR CAA 90 bp | GACAGATGCCTACATAATCCCTACAGAAGTTATTTGAAGAGGAAGTaGAAACCCCCATCTGTGAAGAGTCTGGGGCAATCTCCAGTAGGA | + |
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Preference number: 2 (lower is better) Translates to: DRCLHNPYRSYLKRK*KPPSVKSLGQSPVG Trigger: TCCTACTGGAGATTGCCCCAGACTCTTCACAGATGGGGGTTTCAACTTCCTCTTCAAATAACTTCTGTAGGGATTATGTAGGCATCTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
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| 3UTR GCA 72 bp | CTCTGCAGCAGCAAGGCCATGAAGATAAAGAGCTCCTaGCGGGCCAGAGCCTCTCCAATGCACGATCGGGGA | + |
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Preference number: 3 (lower is better) Translates to: LCSSKAMKIKSS*RARASPMHDRG Trigger: TCCCCGATCGTGCATTGGAGAGGCTCTGGCCCGGCAGGAGCTCTTTATCTTCATGGCCTTGCTGCTGCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
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| 3UTR CCA 72 bp | AGGAGGATTGTTGGAGGCACCTCTAAGATTGGGCTGTaGGTGTCAAGGCATGGGATCCGGGACGTTAGATTC | + |
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Preference number: 3 (lower is better) Translates to: RRIVGGTSKIGL*VSRHGIRDVRF Trigger: GAATCTAACGTCCCGGATCCCATGCCTTGACACCCACAGCCCAATCTTAGAGGTGCCTCCAACAATCCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
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| 3UTR-3UTR CAA 90 bp | CATGCTTGTCGCACTGTGATTTTCACTTTGAAAGGGTCGATCAGAAAGACCACCAGAGGGACAGGCCTCTaGGGAGACAGATGCCTACAT | + |
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Preference number: 3 (lower is better) Translates to: HACRTVIFTLKGSIRKTTRGTGL*GDRCLH Trigger: ATGTAGGCATCTGTCTCCCAAGAGGCCTGTCCCTCT...GGTGGTCTTTCTGATCGACCCTTTCAAAGTGAAAATCACAGTGCGACAAGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
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| 3UTR GCA 72 bp | CCTCTAGGTGCTAACCTCAACCTGTGCATCCTTCCATaGTTGTCGCACTGTGATTTTCACTTTGAAAGGGTC | + |
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Preference number: 3 (lower is better) Translates to: PLGANLNLCILP*LSHCDFHFERV Trigger: GACCCTTTCAAAGTGAAAATCACAGTGCGACAAGCATGGAAGGATGCACAGGTTGAGGTTAGCACCTAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
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| 3UTR CCA 72 bp | AAAATGCCCCATCCAAGAGAAGAGGGACAGGCCTCTTaGGAGACAGATGCCTACATAATCCCTACAGAAGTT | + |
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Preference number: 3 (lower is better) Translates to: KMPHPREEGQAS*ETDAYIIPTEV Trigger: AACTTCTGTAGGGATTATGTAGGCATCTGTCTCCCAAGAGGCCTGTCCCTCTTCTCTTGGATGGGGCATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
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| 3UTR-3UTR CAA 90 bp | GTGATTTTCACTTTGAAAGGGTCGATCAGAAAGACCACCTTGGGGTCACCCACCTATTTGAAGAGGAAGTaGAAACCCCCATCTGTGAAG | + |
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Preference number: 3 (lower is better) Translates to: VIFTLKGSIRKTTLGSPTYLKRK*KPPSVK Trigger: CTTCACAGATGGGGGTTTCAACTTCCTCTTCAAATA...GGTGGGTGACCCCAAGGTGGTCTTTCTGATCGACCCTTTCAAAGTGAAAATCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
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| 3UTR GCA 72 bp | TCCAAGAGAAGAGGGACAGGCCTCTTGGGAGACAGATaGCTACATAATCCCTACAGAAGTTATTTGAAGAGG | + |
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Preference number: 3 (lower is better) Translates to: SKRRGTGLLGDR*LHNPYRSYLKR Trigger: CCTCTTCAAATAACTTCTGTAGGGATTATGTAGGCATCTGTCTCCCAAGAGGCCTGTCCCTCTTCTCTTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
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| 3UTR GCA 72 bp | AGCTGTTTGTCATCTGACACATCAAAGTCAAACCTCTaGAGCAGCAAGGCCATGAAGATAAAGAGCTCCTGC | + |
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Preference number: 3 (lower is better) Translates to: SCLSSDTSKSNL*SSKAMKIKSSC Trigger: GCAGGAGCTCTTTATCTTCATGGCCTTGCTGCTGCAGAGGTTTGACTTTGATGTGTCAGATGACAAACAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
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| 3UTR-3UTR CAA 90 bp | CATGCTTGTCGCACTGTGATTTTCACTTTGAAAGGGTCGATCAGAAAGACCACCAATCTCGACTTGCTTTaGGGGCATGAGGAAATAAAT | + |
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Preference number: 3 (lower is better) Translates to: HACRTVIFTLKGSIRKTTNLDLL*GHEEIN Trigger: ATTTATTTCCTCATGCCCCAAAAGCAAGTCGAGATT...GGTGGTCTTTCTGATCGACCCTTTCAAAGTGAAAATCACAGTGCGACAAGCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
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| 3UTR GCA 72 bp | TGGAAAACCTTTAATATGTGTCTCACCCTTCATTGCTaGCAAGTAGAAAACGGGATAGGAGTGAGGAGGATT | + |
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Preference number: 3 (lower is better) Translates to: WKTFNMCLTLHC*QVENGIGVRRI Trigger: AATCCTCCTCACTCCTATCCCGTTTTCTACTTGGCAGCAATGAAGGGTGAGACACATATTAAAGGTTTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
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| CDS-3UTR CCA 90 bp | AAAGAGCTCCTGCCGGGCCAGAGCCTCTCCAATGCACGATCGGGGACCAGCTCCGTGTGTCCTTCGGGATaGCAAACTCTCCAATGCTGG | + |
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Preference number: 4 (lower is better) Translates to: KELLPGQSLSNARSGTSSVCPSG*QTLQCW Trigger: CCAGCATTGGAGAGTTTGCCATCCCGAAGGACACAC...GGAGCTGGTCCCCGATCGTGCATTGGAGAGGCTCTGGCCCGGCAGGAGCTCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
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| CDS-3UTR CCA 90 bp | AGGAGGATTGTTGGAGGCACCTCTAAGATTGGGCTGTGGGTGTCAAGGCATGGGTCCAGGCTGGCTGTGTaGCGCAGGAGCCAGCATGGA | + |
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Preference number: 4 (lower is better) Translates to: RRIVGGTSKIGLWVSRHGSRLAV*RRSQHG Trigger: TCCATGCTGGCTCCTGCGCCACACAGCCAGCCTGGA...CCCATGCCTTGACACCCACAGCCCAATCTTAGAGGTGCCTCCAACAATCCTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
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| CDS-3UTR CCA 90 bp | ATTTTCACTTTGAAAGGGTCGATCAGAAAGACCACCTTGGGGTCACCCACCAGAGAGCAGAATCCAGGCTaGCTGTGTGGCGCAGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: IFTLKGSIRKTTLGSPTREQNPG*LCGAGA Trigger: GGCTCCTGCGCCACACAGCCAGCCTGGATTCTGCTC...TCTGGTGGGTGACCCCAAGGTGGTCTTTCTGATCGACCCTTTCAAAGTGAAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
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| 3UTR CAA 72 bp | ACCACCTTGGGGTCACCCACCAGACAGGGCAGCTGTTaGTCATCTGACACATCAAAGTCAAACCTCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: TTLGSPTRQGSC*SSDTSKSNLCS Trigger: GCTGCAGAGGTTTGACTTTGATGTGTCAGATGACAAACAGCTGCCCTGTCTGGTGGGTGACCCCAAGGTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
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| CDS-3UTR CCA 90 bp | TTGCTGCCAAGTAGAAAACGGGATAGGAGTGAGGAGGATTGTTGGAGGCACCTCCCTAGAGTCACCATCTaGGGCCGACCAGAGAATTCT | + |
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Preference number: 4 (lower is better) Translates to: LLPSRKRDRSEEDCWRHLPRVTI*GRPENS Trigger: AGAATTCTCTGGTCGGCCCCAGATGGTGACTCTAGG...GAGGTGCCTCCAACAATCCTCCTCACTCCTATCCCGTTTTCTACTTGGCAGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
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| CDS-3UTR CCA 90 bp | TGCTGCCAAGTAGAAAACGGGATAGGAGTGAGGAGGATTGTTGGAGGCACCTCTGTGTGTCCTTCGGGATaGCAAACTCTCCAATGCTGG | + |
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Preference number: 4 (lower is better) Translates to: CCQVENGIGVRRIVGGTSVCPSG*QTLQCW Trigger: CCAGCATTGGAGAGTTTGCCATCCCGAAGGACACAC...AGAGGTGCCTCCAACAATCCTCCTCACTCCTATCCCGTTTTCTACTTGGCAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
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| CDS-3UTR TCA 90 bp | GTAGAAAACGGGATAGGAGTGAGGAGGATTGTTGGAGGCACCTCTAAGATTGGGACAGGGAAAAGGTGCTaGATACCAGCTTCCGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: VENGIGVRRIVGGTSKIGTGKRC*IPASGA Trigger: TGCACCGGAAGCTGGTATTCAGCACCTTTTCCCTGT...CCCAATCTTAGAGGTGCCTCCAACAATCCTCCTCACTCCTATCCCGTTTTCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
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| CDS-3UTR CCA 90 bp | ATTGTTGGAGGCACCTCTAAGATTGGGCTGTGGGTGTCAAGGCATGGGATCCGGGGCGAAGAGAATAGATaGGACCATACTTTTCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: IVGGTSKIGLWVSRHGIRGEENR*DHTFPA Trigger: TGCAGGAAAAGTATGGTCCCATCTATTCTCTTCGCC...CCGGATCCCATGCCTTGACACCCACAGCCCAATCTTAGAGGTGCCTCCAACAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
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| CDS-3UTR TCA 90 bp | TCATTGCTGCCAAGTAGAAAACGGGATAGGAGTGAGGAGGATTGTTGGAGGCACAGAAATAGGCCAGGATaGGCAGCAAGAGACCCACAA | + |
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Preference number: 4 (lower is better) Translates to: SLLPSRKRDRSEEDCWRHRNRPG*AARDPQ Trigger: TTGTGGGTCTCTTGCTGCTCATCCTGGCCTATTTCT...GTGCCTCCAACAATCCTCCTCACTCCTATCCCGTTTTCTACTTGGCAGCAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
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| CDS-3UTR TCA 90 bp | AGGAGGATTGTTGGAGGCACCTCTAAGATTGGGCTGTGGGTGTCAAGGCATGGGACTTTTCCTGCAGCTTaGAGAAGTTGGCATGCATAT | + |
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Preference number: 4 (lower is better) Translates to: RRIVGGTSKIGLWVSRHGTFPAA*RSWHAY Trigger: ATATGCATGCCAACTTCTTCAAGCTGCAGGAAAAGT...CCCATGCCTTGACACCCACAGCCCAATCTTAGAGGTGCCTCCAACAATCCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
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| CDS-3UTR TCA 90 bp | AGGAGGATTGTTGGAGGCACCTCTAAGATTGGGCTGTGGGTGTCAAGGCATGGGCAGCTGTTTGTCATCTaGCACATCAAAGTCAAACCT | + |
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Preference number: 4 (lower is better) Translates to: RRIVGGTSKIGLWVSRHGQLFVI*HIKVKP Trigger: AGGTTTGACTTTGATGTGTCAGATGACAAACAGCTG...CCCATGCCTTGACACCCACAGCCCAATCTTAGAGGTGCCTCCAACAATCCTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026012.8 |
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| CDS-3UTR GCA 90 bp | ATAGGAGTGAGGAGGATTGTTGGAGGCACCTCTAAGATTGGGCTGTGGGTGTCATCAAAGTCAAACCTCTaGAGCAGCAAGGCCATGAAG | + |
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Preference number: 4 (lower is better) Translates to: IGVRRIVGGTSKIGLWVSSKSNL*SSKAMK Trigger: CTTCATGGCCTTGCTGCTGCAGAGGTTTGACTTTGA...TGACACCCACAGCCCAATCTTAGAGGTGCCTCCAACAATCCTCCTCACTCCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026012.8 |
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| CDS-3UTR CCA 90 bp | AGGAGGATTGTTGGAGGCACCTCTAAGATTGGGCTGTGGGTGTCAAGGCATGGGAGTCACACAGTGAGTTaGCTTCCTGACATATCATCT | + |
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Preference number: 4 (lower is better) Translates to: RRIVGGTSKIGLWVSRHGSHTVS*LPDISS Trigger: AGATGATATGTCAGGAAGCCAACTCACTGTGTGACT...CCCATGCCTTGACACCCACAGCCCAATCTTAGAGGTGCCTCCAACAATCCTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
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| CDS-3UTR CCA 90 bp | ATAGGAGTGAGGAGGATTGTTGGAGGCACCTCTAAGATTGGGCTGTGGGTGTCAAACACACTTGGGTCCTaGCCTTCCCCAGTGTTATTA | + |
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Preference number: 4 (lower is better) Translates to: IGVRRIVGGTSKIGLWVSNTLGS*PSPVLL Trigger: TAATAACACTGGGGAAGGCCAGGACCCAAGTGTGTT...TGACACCCACAGCCCAATCTTAGAGGTGCCTCCAACAATCCTCCTCACTCCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
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| 3UTR CAA 72 bp | GAAAATGCCCCATCCAAGAGAAGAGGGACAGGCCTCTaGGGAGACAGATGCCTACATAATCCCTACAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: ENAPSKRRGTGL*GDRCLHNPYRS Trigger: ACTTCTGTAGGGATTATGTAGGCATCTGTCTCCCAAGAGGCCTGTCCCTCTTCTCTTGGATGGGGCATTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
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| CDS-3UTR TCA 90 bp | TTGCTGCCAAGTAGAAAACGGGATAGGAGTGAGGAGGATTGTTGGAGGCACCTCAAGGATATGCTTATCTaGGAACACACTTGGGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: LLPSRKRDRSEEDCWRHLKDMLI*EHTWVL Trigger: CAGGACCCAAGTGTGTTCTCAGATAAGCATATCCTT...GAGGTGCCTCCAACAATCCTCCTCACTCCTATCCCGTTTTCTACTTGGCAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
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| CDS-3UTR CCA 90 bp | CATGCTTGTCGCACTGTGATTTTCACTTTGAAAGGGTCGATCAGAAAGACCACCCCTAGAGTCACCATCTaGGGCCGACCAGAGAATTCT | + |
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Preference number: 4 (lower is better) Translates to: HACRTVIFTLKGSIRKTTPRVTI*GRPENS Trigger: AGAATTCTCTGGTCGGCCCCAGATGGTGACTCTAGG...GGTGGTCTTTCTGATCGACCCTTTCAAAGTGAAAATCACAGTGCGACAAGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
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| CDS-3UTR CCA 90 bp | AGGATTGTTGGAGGCACCTCTAAGATTGGGCTGTGGGTGTCAAGGCATGGGATCCTGAAGCCTACATACTaGTCAATCTCCTTTTGGATC | + |
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Preference number: 4 (lower is better) Translates to: RIVGGTSKIGLWVSRHGILKPTY*SISFWI Trigger: GATCCAAAAGGAGATTGACCAGTATGTAGGCTTCAG...GATCCCATGCCTTGACACCCACAGCCCAATCTTAGAGGTGCCTCCAACAATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
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| CDS-3UTR CCA 90 bp | CATGCTTGTCGCACTGTGATTTTCACTTTGAAAGGGTCGATCAGAAAGACCACCGGAGCCAGCATGGAATaGACAAGAACTCACCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: HACRTVIFTLKGSIRKTTGASME*TRTHQA Trigger: TGCCTGGTGAGTTCTTGTCCATTCCATGCTGGCTCC...GGTGGTCTTTCTGATCGACCCTTTCAAAGTGAAAATCACAGTGCGACAAGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
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| CDS-3UTR TCA 90 bp | CAAGTAGAAAACGGGATAGGAGTGAGGAGGATTGTTGGAGGCACCTCTAAGATTAGAAATAGGCCAGGATaGGCAGCAAGAGACCCACAA | + |
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Preference number: 4 (lower is better) Translates to: QVENGIGVRRIVGGTSKIRNRPG*AARDPQ Trigger: TTGTGGGTCTCTTGCTGCTCATCCTGGCCTATTTCT...AATCTTAGAGGTGCCTCCAACAATCCTCCTCACTCCTATCCCGTTTTCTACTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
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| CDS-3UTR TCA 90 bp | ATAGGAGTGAGGAGGATTGTTGGAGGCACCTCTAAGATTGGGCTGTGGGTGTCATATCAAGTCACACAGTaGGTTGGCTTCCTGACATAT | + |
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Preference number: 4 (lower is better) Translates to: IGVRRIVGGTSKIGLWVSYQVTQ*VGFLTY Trigger: ATATGTCAGGAAGCCAACTCACTGTGTGACTTGATA...TGACACCCACAGCCCAATCTTAGAGGTGCCTCCAACAATCCTCCTCACTCCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
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| CDS-3UTR TCA 90 bp | GATTTTCACTTTGAAAGGGTCGATCAGAAAGACCACCTTGGGGTCACCCACCAGAAGGATATGCTTATCTaGGAACACACTTGGGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: DFHFERVDQKDHLGVTHQKDMLI*EHTWVL Trigger: CAGGACCCAAGTGTGTTCTCAGATAAGCATATCCTT...CTGGTGGGTGACCCCAAGGTGGTCTTTCTGATCGACCCTTTCAAAGTGAAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
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| CDS-3UTR GCA 90 bp | CTTCATTGCTGCCAAGTAGAAAACGGGATAGGAGTGAGGAGGATTGTTGGAGGCGGACCATACTTTTCCTaGAGCTTGAAGAAGTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: LHCCQVENGIGVRRIVGGGPYFS*SLKKLA Trigger: TGCCAACTTCTTCAAGCTGCAGGAAAAGTATGGTCC...GCCTCCAACAATCCTCCTCACTCCTATCCCGTTTTCTACTTGGCAGCAATGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
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| CDS-3UTR GCA 90 bp | TCATTGCTGCCAAGTAGAAAACGGGATAGGAGTGAGGAGGATTGTTGGAGGCACGGACCATACTTTTCCTaGAGCTTGAAGAAGTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: SLLPSRKRDRSEEDCWRHGPYFS*SLKKLA Trigger: TGCCAACTTCTTCAAGCTGCAGGAAAAGTATGGTCC...GTGCCTCCAACAATCCTCCTCACTCCTATCCCGTTTTCTACTTGGCAGCAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
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| CDS-3UTR CCA 90 bp | AGGAGGATTGTTGGAGGCACCTCTAAGATTGGGCTGTGGGTGTCAAGGCATGGGTTTCTGCATTCATCTTaGCTTGTATCAGAATGTCTG | + |
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Preference number: 4 (lower is better) Translates to: RRIVGGTSKIGLWVSRHGFLHSS*LVSECL Trigger: CAGACATTCTGATACAAGCCAAGATGAATGCAGAAA...CCCATGCCTTGACACCCACAGCCCAATCTTAGAGGTGCCTCCAACAATCCTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
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| CDS-3UTR CCA 90 bp | CCTCTAGGTGCTAACCTCAACCTGTGCATCCTTCCATGCTTGTCGCACTGTGATTGGTCAATCTCCTTTTaGATCTTCCTCTTCACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PLGANLNLCILPCLSHCDWSISF*IFLFTS Trigger: TGAGGTGAAGAGGAAGATCCAAAAGGAGATTGACCA...ATCACAGTGCGACAAGCATGGAAGGATGCACAGGTTGAGGTTAGCACCTAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
||
| CDS-3UTR CCA 90 bp | CCCACCAGACAGGGCAGCTGTTTGTCATCTGACACATCAAAGTCAAACCTCTGCCTGAAGCCTACATACTaGTCAATCTCCTTTTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: PTRQGSCLSSDTSKSNLCLKPTY*SISFWI Trigger: GATCCAAAAGGAGATTGACCAGTATGTAGGCTTCAG...GCAGAGGTTTGACTTTGATGTGTCAGATGACAAACAGCTGCCCTGTCTGGTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
||
| CDS-3UTR TCA 90 bp | CATGCTTGTCGCACTGTGATTTTCACTTTGAAAGGGTCGATCAGAAAGACCACCAAAAAGTGCTGTCCTTaGAGAGCAGAATCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HACRTVIFTLKGSIRKTTKKCCP*RAESRL Trigger: CAGCCTGGATTCTGCTCTTCAAGGACAGCACTTTTT...GGTGGTCTTTCTGATCGACCCTTTCAAAGTGAAAATCACAGTGCGACAAGCATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
||
| CDS-3UTR TCA 90 bp | ATTTTCACTTTGAAAGGGTCGATCAGAAAGACCACCTTGGGGTCACCCACCAGAACTTTTCCTGCAGCTTaGAGAAGTTGGCATGCATAT | + |
|
Preference number: 4 (lower is better) Translates to: IFTLKGSIRKTTLGSPTRTFPAA*RSWHAY Trigger: ATATGCATGCCAACTTCTTCAAGCTGCAGGAAAAGT...TCTGGTGGGTGACCCCAAGGTGGTCTTTCTGATCGACCCTTTCAAAGTGAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
||
| CDS-3UTR TCA 90 bp | CAAGTAGAAAACGGGATAGGAGTGAGGAGGATTGTTGGAGGCACCTCTAAGATTAGTGAGTTGGCTTCCTaGCATATCATCTTCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QVENGIGVRRIVGGTSKISELAS*HIIFSS Trigger: ACTGGAGAAGATGATATGTCAGGAAGCCAACTCACT...AATCTTAGAGGTGCCTCCAACAATCCTCCTCACTCCTATCCCGTTTTCTACTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
||
| CDS-3UTR CCA 90 bp | TCATCTGACACATCAAAGTCAAACCTCTGCAGCAGCAAGGCCATGAAGATAAAGAACACACTTGGGTCCTaGCCTTCCCCAGTGTTATTA | + |
|
Preference number: 4 (lower is better) Translates to: SSDTSKSNLCSSKAMKIKNTLGS*PSPVLL Trigger: TAATAACACTGGGGAAGGCCAGGACCCAAGTGTGTT...CTTTATCTTCATGGCCTTGCTGCTGCAGAGGTTTGACTTTGATGTGTCAGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
||
| CDS-3UTR CCA 90 bp | TGCTTGTCGCACTGTGATTTTCACTTTGAAAGGGTCGATCAGAAAGACCACCTTGGCGAAGAGAATAGATaGGACCATACTTTTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CLSHCDFHFERVDQKDHLGEENR*DHTFPA Trigger: TGCAGGAAAAGTATGGTCCCATCTATTCTCTTCGCC...AAGGTGGTCTTTCTGATCGACCCTTTCAAAGTGAAAATCACAGTGCGACAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
||
| CDS-3UTR CCA 90 bp | GGTGCTAACCTCAACCTGTGCATCCTTCCATGCTTGTCGCACTGTGATTTTCACTTTCTGCATTCATCTTaGCTTGTATCAGAATGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GANLNLCILPCLSHCDFHFLHSS*LVSECL Trigger: CAGACATTCTGATACAAGCCAAGATGAATGCAGAAA...GTGAAAATCACAGTGCGACAAGCATGGAAGGATGCACAGGTTGAGGTTAGCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
||
| CDS-3UTR CCA 90 bp | CAAGTAGAAAACGGGATAGGAGTGAGGAGGATTGTTGGAGGCACCTCTAAGATTTGGTCAATCTCCTTTTaGATCTTCCTCTTCACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QVENGIGVRRIVGGTSKIWSISF*IFLFTS Trigger: TGAGGTGAAGAGGAAGATCCAAAAGGAGATTGACCA...AATCTTAGAGGTGCCTCCAACAATCCTCCTCACTCCTATCCCGTTTTCTACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
||
| CDS-3UTR TCA 90 bp | TGCTTGTCGCACTGTGATTTTCACTTTGAAAGGGTCGATCAGAAAGACCACCTTTATCAAGTCACACAGTaGGTTGGCTTCCTGACATAT | + |
|
Preference number: 4 (lower is better) Translates to: CLSHCDFHFERVDQKDHLYQVTQ*VGFLTY Trigger: ATATGTCAGGAAGCCAACTCACTGTGTGACTTGATA...AAGGTGGTCTTTCTGATCGACCCTTTCAAAGTGAAAATCACAGTGCGACAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
||
| CDS CCA 90 bp | TTGAAGAGCAGAATCCAGGCTGGCTGTGTGGCGCAGGAGCCAGCATaGAATGGACAAGAACTCACCAGGCATAAACCGATCTGGCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LKSRIQAGCVAQEPA*NGQELTRHKPIWLV Trigger: GACCAGCCAGATCGGTTTATGCCTGGTGAGTTCTTGTCCATTCCATGCTGGCTCCTGCGCCACACAGCCAGCCTGGATTCTGCTCTTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
||
| CDS CCA 90 bp | GGGGCCGACCAGAGAATTCTTTCCCCTTCTTCACGAGCACTTCTCTaGCCAGCTGATAGTGACCGACAATCACTGCAGTTGTGGTACCCA | + |
|
Preference number: 5 (lower is better) Translates to: GADQRILSPSSRALL*PADSDRQSLQLWYP Trigger: TGGGTACCACAACTGCAGTGATTGTCGGTCACTATCAGCTGGCCAGAGAAGTGCTCGTGAAGAAGGGGAAAGAATTCTCTGGTCGGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
||
| CDS-3UTR CAA 90 bp | TGGCTTCCTGTTGGATCTAAGAAGCGCTCTGGGGACAAATGGGAAGCATCAGCCAGGCTCCTGGGGAACTaGGCATTAGGTGTCTTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: WLPVGSKKRSGDKWEASARLLGN*ALGVFD Trigger: GTCAAAGACACCTAATGCCAAGTTCCCCAGGAGCCT...GGCTGATGCTTCCCATTTGTCCCCAGAGCGCTTCTTAGATCCAACAGGAAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
||
| CDS TCA 90 bp | CTGATACGAAGCACTTCTCGGATAGTGGCCTCCAGCATGAGGAGGTaGGTCCGGTCATTGAAAGACGGTGTTCGACTGAAGCCTACATAC | + |
|
Preference number: 5 (lower is better) Translates to: LIRSTSRIVASSMRR*VRSLKDGVRLKPTY Trigger: GTATGTAGGCTTCAGTCGAACACCGTCTTTCAATGACCGGACTCACCTCCTCATGCTGGAGGCCACTATCCGAGAAGTGCTTCGTATCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
||
| CDS TCA 90 bp | AGGTTTCTAGTAACAAGCTTAGTGGGCAGGAAAAAGTGCTGTCCTTaGAGAGCAGAATCCAGGCTGGCTGTGTGGCGCAGGAGCCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: RFLVTSLVGRKKCCP*RAESRLAVWRRSQH Trigger: ATGCTGGCTCCTGCGCCACACAGCCAGCCTGGATTCTGCTCTTCAAGGACAGCACTTTTTCCTGCCCACTAAGCTTGTTACTAGAAACCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
||
| CDS GCA 90 bp | GTCTCTATGCCTGCCCCAAAGATGTCTCCCACCGTGACAAGGATATaGTTATCTGAGAACACACTTGGGTCCTGGCCTTCCCCAGTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: VSMPAPKMSPTVTRI*LSENTLGSWPSPVL Trigger: TAACACTGGGGAAGGCCAGGACCCAAGTGTGTTCTCAGATAAGCATATCCTTGTCACGGTGGGAGACATCTTTGGGGCAGGCATAGAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
||
| CDS-3UTR CAA 90 bp | TTGCTGCCAAGTAGAAAACGGGATAGGAGTGAGGAGGATTGTTGGAGGCACCTCAGGCTCCTGGGGAACTaGGCATTAGGTGTCTTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LLPSRKRDRSEEDCWRHLRLLGN*ALGVFD Trigger: GTCAAAGACACCTAATGCCAAGTTCCCCAGGAGCCT...GAGGTGCCTCCAACAATCCTCCTCACTCCTATCCCGTTTTCTACTTGGCAGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
||
| CDS GCA 90 bp | CTTCACGAGCACTTCTCTGGCCAGCTGATAGTGACCGACAATCACTaGAGTTGTGGTACCCAGGCGAAGAGAATAGATGGGACCATACTT | + |
|
Preference number: 5 (lower is better) Translates to: LHEHFSGQLIVTDNH*SCGTQAKRIDGTIL Trigger: AAGTATGGTCCCATCTATTCTCTTCGCCTGGGTACCACAACTGCAGTGATTGTCGGTCACTATCAGCTGGCCAGAGAAGTGCTCGTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
||
| CDS CCA 90 bp | GCACTTCTCTGGCCAGCTGATAGTGACCGACAATCACTGCAGTTGTaGTACCCAGGCGAAGAGAATAGATGGGACCATACTTTTCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: ALLWPADSDRQSLQL*YPGEENRWDHTFPA Trigger: TGCAGGAAAAGTATGGTCCCATCTATTCTCTTCGCCTGGGTACCACAACTGCAGTGATTGTCGGTCACTATCAGCTGGCCAGAGAAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
||
| CDS-3UTR CAA 90 bp | GTCAAACCTCTGCAGCAGCAAGGCCATGAAGATAAAGAGCTCCTGCCGGGCCAGTGCATTCATCTTGGCTaGTATCAGAATGTCTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: VKPLQQQGHEDKELLPGQCIHLG*YQNVCQ Trigger: CTGACAGACATTCTGATACAAGCCAAGATGAATGCA...CTGGCCCGGCAGGAGCTCTTTATCTTCATGGCCTTGCTGCTGCAGAGGTTTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
||
| CDS-3UTR CAA 90 bp | ATAGGAGTGAGGAGGATTGTTGGAGGCACCTCTAAGATTGGGCTGTGGGTGTCATGCAGTGCCCAGAGATaGATGATCACATGTGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: IGVRRIVGGTSKIGLWVSCSAQR*MITCVS Trigger: GGACACACATGTGATCATCAATCTCTGGGCACTGCA...TGACACCCACAGCCCAATCTTAGAGGTGCCTCCAACAATCCTCCTCACTCCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
||
| CDS TCA 90 bp | CGCTCAGGCATAAACCGATCTGGCTGGTCCCATTCATTTTTATCGTaGTGCAGTGCCCAGAGATTGATGATCACATGTGTGTCCTTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: RSGINRSGWSHSFLS*CSAQRLMITCVSFG Trigger: CCCGAAGGACACACATGTGATCATCAATCTCTGGGCACTGCATCACGATAAAAATGAATGGGACCAGCCAGATCGGTTTATGCCTGAGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026012.8 |
||
| CDS-3UTR CAA 90 bp | CCCACCAGACAGGGCAGCTGTTTGTCATCTGACACATCAAAGTCAAACCTCTGCGAAAAAGTGCTGTCCTaGAAGAGCAGAATCCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PTRQGSCLSSDTSKSNLCEKVLS*KSRIQA Trigger: AGCCTGGATTCTGCTCTTCAAGGACAGCACTTTTTC...GCAGAGGTTTGACTTTGATGTGTCAGATGACAAACAGCTGCCCTGTCTGGTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
||
| CDS TCA 90 bp | TACCCAGGCGAAGAGAATAGATGGGACCATACTTTTCCTGCAGCTTaGAGAAGTTGGCATGCATATGACCACGTCTGGGGAGAAACGGTA | + |
|
Preference number: 5 (lower is better) Translates to: YPGEENRWDHTFPAA*RSWHAYDHVWGETV Trigger: TACCGTTTCTCCCCAGACGTGGTCATATGCATGCCAACTTCTTCAAGCTGCAGGAAAAGTATGGTCCCATCTATTCTCTTCGCCTGGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
||
| CDS TCA 90 bp | TCACCAGGCATAAACCGATCTGGCTGGTCCCATTCATTTTTATCGTaGTGCAGTGCCCAGAGATTGATGATCACATGTGTGTCCTTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SPGINRSGWSHSFLS*CSAQRLMITCVSFG Trigger: CCCGAAGGACACACATGTGATCATCAATCTCTGGGCACTGCATCACGATAAAAATGAATGGGACCAGCCAGATCGGTTTATGCCTGGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
||
| CDS CCA 90 bp | GAGCCAGCATGGAATGGACAAGAACTCACCAGGCATAAACCGATCTaGCTGGTCCCATTCATTTTTATCGTGATGCAGTGCCCAGAGATT | + |
|
Preference number: 5 (lower is better) Translates to: EPAWNGQELTRHKPI*LVPFIFIVMQCPEI Trigger: AATCTCTGGGCACTGCATCACGATAAAAATGAATGGGACCAGCCAGATCGGTTTATGCCTGGTGAGTTCTTGTCCATTCCATGCTGGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
||
| CDS-3UTR CAA 90 bp | AGGAGGATTGTTGGAGGCACCTCTAAGATTGGGCTGTGGGTGTCAAGGCATGGGTTCTCAAAAGAGATGTaGAAGCAGATGGTACAGATG | + |
|
Preference number: 5 (lower is better) Translates to: RRIVGGTSKIGLWVSRHGFSKEM*KQMVQM Trigger: CATCTGTACCATCTGCTTCAACATCTCTTTTGAGAA...CCCATGCCTTGACACCCACAGCCCAATCTTAGAGGTGCCTCCAACAATCCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
||
| CDS-3UTR CAA 90 bp | CTTCATTGCTGCCAAGTAGAAAACGGGATAGGAGTGAGGAGGATTGTTGGAGGCCTGGTCAATCTCCTTTaGGATCTTCCTCTTCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: LHCCQVENGIGVRRIVGGLVNLL*DLPLHL Trigger: GAGGTGAAGAGGAAGATCCAAAAGGAGATTGACCAG...GCCTCCAACAATCCTCCTCACTCCTATCCCGTTTTCTACTTGGCAGCAATGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
||
| CDS-3UTR CAA 90 bp | GATTTTCACTTTGAAAGGGTCGATCAGAAAGACCACCTTGGGGTCACCCACCAGCTGGTCAATCTCCTTTaGGATCTTCCTCTTCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: DFHFERVDQKDHLGVTHQLVNLL*DLPLHL Trigger: GAGGTGAAGAGGAAGATCCAAAAGGAGATTGACCAG...CTGGTGGGTGACCCCAAGGTGGTCTTTCTGATCGACCCTTTCAAAGTGAAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
||
| CDS-3UTR CAA 90 bp | ATTGTTGGAGGCACCTCTAAGATTGGGCTGTGGGTGTCAAGGCATGGGATCCGGTTTTCTGCATTCATCTaGGCTTGTATCAGAATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: IVGGTSKIGLWVSRHGIRFSAFI*ACIRMS Trigger: AGACATTCTGATACAAGCCAAGATGAATGCAGAAAA...CCGGATCCCATGCCTTGACACCCACAGCCCAATCTTAGAGGTGCCTCCAACAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
||
| CDS TCA 90 bp | TCCCCGTCGTATGTAAGTATCAAGTCACACAGTGAGTTGGCTTCCTaGCATATCATCTTCTCCAGTTTCTGGTCATCCCTGAACAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SPSYVSIKSHSELAS*HIIFSSFWSSLNRE Trigger: TTCCCTGTTCAGGGATGACCAGAAACTGGAGAAGATGATATGTCAGGAAGCCAACTCACTGTGTGACTTGATACTTACATACGACGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
||
| CDS GCA 90 bp | CATAAACCGATCTGGCTGGTCCCATTCATTTTTATCGTGATGCAGTaGCCAGAGATTGATGATCACATGTGTGTCCTTCGGGATGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: HKPIWLVPFIFIVMQ*PEIDDHMCVLRDGK Trigger: TTTGCCATCCCGAAGGACACACATGTGATCATCAATCTCTGGGCACTGCATCACGATAAAAATGAATGGGACCAGCCAGATCGGTTTATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
||
| CDS-3UTR CAA 90 bp | GTAGAAAACGGGATAGGAGTGAGGAGGATTGTTGGAGGCACCTCTAAGATTGGGTACTTTTCCTGCAGCTaGAAGAAGTTGGCATGCATA | + |
|
Preference number: 5 (lower is better) Translates to: VENGIGVRRIVGGTSKIGYFSCS*KKLACI Trigger: TATGCATGCCAACTTCTTCAAGCTGCAGGAAAAGTA...CCCAATCTTAGAGGTGCCTCCAACAATCCTCCTCACTCCTATCCCGTTTTCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
||
| CDS-3UTR CAA 90 bp | TGCCAAGTAGAAAACGGGATAGGAGTGAGGAGGATTGTTGGAGGCACCTCTAAGTACTTTTCCTGCAGCTaGAAGAAGTTGGCATGCATA | + |
|
Preference number: 5 (lower is better) Translates to: CQVENGIGVRRIVGGTSKYFSCS*KKLACI Trigger: TATGCATGCCAACTTCTTCAAGCTGCAGGAAAAGTA...CTTAGAGGTGCCTCCAACAATCCTCCTCACTCCTATCCCGTTTTCTACTTGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
||
| CDS-3UTR CAA 90 bp | TCATTGCTGCCAAGTAGAAAACGGGATAGGAGTGAGGAGGATTGTTGGAGGCACTGCATTCATCTTGGCTaGTATCAGAATGTCTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SLLPSRKRDRSEEDCWRHCIHLG*YQNVCQ Trigger: CTGACAGACATTCTGATACAAGCCAAGATGAATGCA...GTGCCTCCAACAATCCTCCTCACTCCTATCCCGTTTTCTACTTGGCAGCAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
||
| CDS-3UTR CAA 90 bp | ATAGGAGTGAGGAGGATTGTTGGAGGCACCTCTAAGATTGGGCTGTGGGTGTCAATATTGATTACTGACTaGAAGATGAGCGTAGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: IGVRRIVGGTSKIGLWVSILITD*KMSVDR Trigger: TCTGTCTACGCTCATCTTCAAGTCAGTAATCAATAT...TGACACCCACAGCCCAATCTTAGAGGTGCCTCCAACAATCCTCCTCACTCCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
||
| CDS CCA 90 bp | TTGGGTCCTGGCCTTCCCCAGTGTTATTATTTTCTGCATTCATCTTaGCTTGTATCAGAATGTCTGTCAGGCTGGAGAGAGATTCACTAT | + |
|
Preference number: 5 (lower is better) Translates to: LGPGLPQCYYFLHSS*LVSECLSGWREIHY Trigger: ATAGTGAATCTCTCTCCAGCCTGACAGACATTCTGATACAAGCCAAGATGAATGCAGAAAATAATAACACTGGGGAAGGCCAGGACCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
||
| CDS-3UTR CAA 90 bp | GGTGCTAACCTCAACCTGTGCATCCTTCCATGCTTGTCGCACTGTGATTTTCACTTTTCTGCATTCATCTaGGCTTGTATCAGAATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GANLNLCILPCLSHCDFHFSAFI*ACIRMS Trigger: AGACATTCTGATACAAGCCAAGATGAATGCAGAAAA...GTGAAAATCACAGTGCGACAAGCATGGAAGGATGCACAGGTTGAGGTTAGCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
||
| CDS-3UTR CAA 90 bp | TTGTCGCACTGTGATTTTCACTTTGAAAGGGTCGATCAGAAAGACCACCTTGGGTTCTCAAAAGAGATGTaGAAGCAGATGGTACAGATG | + |
|
Preference number: 5 (lower is better) Translates to: LSHCDFHFERVDQKDHLGFSKEM*KQMVQM Trigger: CATCTGTACCATCTGCTTCAACATCTCTTTTGAGAA...CCCAAGGTGGTCTTTCTGATCGACCCTTTCAAAGTGAAAATCACAGTGCGACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
||
| CDS GCA 72 bp | CTGAACAGGGAAAAGGTGCTGAATACCAGCTTCCGGTaGAGCTGCCAGGAGCTACTACTATCCGCAAAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: LNREKVLNTSFR*SCQELLLSAKA Trigger: CGCCTTTGCGGATAGTAGTAGCTCCTGGCAGCTGCACCGGAAGCTGGTATTCAGCACCTTTTCCCTGTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
||
| CDS CCA 72 bp | AGAATCCAGGCTGGCTGTGTGGCGCAGGAGCCAGCATaGAATGGACAAGAACTCACCAGGCATAAACCGATC | + |
|
Preference number: 6 (lower is better) Translates to: RIQAGCVAQEPA*NGQELTRHKPI Trigger: GATCGGTTTATGCCTGGTGAGTTCTTGTCCATTCCATGCTGGCTCCTGCGCCACACAGCCAGCCTGGATTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
||
| CDS TCA 72 bp | AGCACTTCTCGGATAGTGGCCTCCAGCATGAGGAGGTaGGTCCGGTCATTGAAAGACGGTGTTCGACTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: STSRIVASSMRR*VRSLKDGVRLK Trigger: CTTCAGTCGAACACCGTCTTTCAATGACCGGACTCACCTCCTCATGCTGGAGGCCACTATCCGAGAAGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
||
| CDS TCA 72 bp | GTAACAAGCTTAGTGGGCAGGAAAAAGTGCTGTCCTTaGAGAGCAGAATCCAGGCTGGCTGTGTGGCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: VTSLVGRKKCCP*RAESRLAVWRR Trigger: CCTGCGCCACACAGCCAGCCTGGATTCTGCTCTTCAAGGACAGCACTTTTTCCTGCCCACTAAGCTTGTTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
||
| CDS CAA 90 bp | GAGGTTTCTAGTAACAAGCTTAGTGGGCAGGAAAAAGTGCTGTCCTaGAAGAGCAGAATCCAGGCTGGCTGTGTGGCGCAGGAGCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: EVSSNKLSGQEKVLS*KSRIQAGCVAQEPA Trigger: TGCTGGCTCCTGCGCCACACAGCCAGCCTGGATTCTGCTCTTCAAGGACAGCACTTTTTCCTGCCCACTAAGCTTGTTACTAGAAACCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
||
| CDS GCA 72 bp | CACTTCTCTGGCCAGCTGATAGTGACCGACAATCACTaGAGTTGTGGTACCCAGGCGAAGAGAATAGATGGG | + |
|
Preference number: 6 (lower is better) Translates to: HFSGQLIVTDNH*SCGTQAKRIDG Trigger: CCCATCTATTCTCTTCGCCTGGGTACCACAACTGCAGTGATTGTCGGTCACTATCAGCTGGCCAGAGAAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
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| CDS CAA 72 bp | CTCTGGCCAGCTGATAGTGACCGACAATCACTGCAGTaGTGGTACCCAGGCGAAGAGAATAGATGGGACCAT | + |
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Preference number: 6 (lower is better) Translates to: LWPADSDRQSLQ*WYPGEENRWDH Trigger: ATGGTCCCATCTATTCTCTTCGCCTGGGTACCACAACTGCAGTGATTGTCGGTCACTATCAGCTGGCCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
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| CDS CAA 72 bp | AGTAACAAGCTTAGTGGGCAGGAAAAAGTGCTGTCCTaGAAGAGCAGAATCCAGGCTGGCTGTGTGGCGCAG | + |
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Preference number: 6 (lower is better) Translates to: SNKLSGQEKVLS*KSRIQAGCVAQ Trigger: CTGCGCCACACAGCCAGCCTGGATTCTGCTCTTCAAGGACAGCACTTTTTCCTGCCCACTAAGCTTGTTACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236174.2 |
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| CDS CAA 90 bp | CGAGCACTTCTCTGGCCAGCTGATAGTGACCGACAATCACTGCAGTaGTGGTACCCAGGCGAAGAGAATAGATGGGACCATACTTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: RALLWPADSDRQSLQ*WYPGEENRWDHTFP Trigger: AGGAAAAGTATGGTCCCATCTATTCTCTTCGCCTGGGTACCACAACTGCAGTGATTGTCGGTCACTATCAGCTGGCCAGAGAAGTGCTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
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| CDS CCA 72 bp | TGGCCAGCTGATAGTGACCGACAATCACTGCAGTTGTaGTACCCAGGCGAAGAGAATAGATGGGACCATACT | + |
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Preference number: 6 (lower is better) Translates to: WPADSDRQSLQL*YPGEENRWDHT Trigger: AGTATGGTCCCATCTATTCTCTTCGCCTGGGTACCACAACTGCAGTGATTGTCGGTCACTATCAGCTGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
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| CDS CCA 72 bp | ATCTTCAACCACGGGAATATGTCCACCAGATCGCTGTaGCCCAGGACATCCACAATACCCTCTGTAAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: IFNHGNMSTRSL*PRTSTIPSVKV Trigger: GACCTTTACAGAGGGTATTGTGGATGTCCTGGGCCACAGCGATCTGGTGGACATATTCCCGTGGTTGAAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
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| CDS TCA 72 bp | TACTTTTCCTGCAGCTTGAAGAAGTTGGCATGCATATaGCCACGTCTGGGGAGAAACGGTAGACTACCCACC | + |
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Preference number: 6 (lower is better) Translates to: YFSCSLKKLACI*PRLGRNGRLPT Trigger: GGTGGGTAGTCTACCGTTTCTCCCCAGACGTGGTCATATGCATGCCAACTTCTTCAAGCTGCAGGAAAAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
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| CDS TCA 72 bp | AAAGATGTCTCCCACCGTGACAAGGATATGCTTATCTaGGAACACACTTGGGTCCTGGCCTTCCCCAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: KDVSHRDKDMLI*EHTWVLAFPSV Trigger: AACACTGGGGAAGGCCAGGACCCAAGTGTGTTCTCAGATAAGCATATCCTTGTCACGGTGGGAGACATCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
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| CDS CCA 72 bp | CAGAGAATTCTTTCCCCTTCTTCACGAGCACTTCTCTaGCCAGCTGATAGTGACCGACAATCACTGCAGTTG | + |
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Preference number: 6 (lower is better) Translates to: QRILSPSSRALL*PADSDRQSLQL Trigger: CAACTGCAGTGATTGTCGGTCACTATCAGCTGGCCAGAGAAGTGCTCGTGAAGAAGGGGAAAGAATTCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
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| CDS TCA 72 bp | TTGTCTCTATGCCTGCCCCAAAGATGTCTCCCACCGTaGCAAGGATATGCTTATCTGAGAACACACTTGGGT | + |
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Preference number: 6 (lower is better) Translates to: LSLCLPQRCLPP*QGYAYLRTHLG Trigger: ACCCAAGTGTGTTCTCAGATAAGCATATCCTTGTCACGGTGGGAGACATCTTTGGGGCAGGCATAGAGACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
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| CDS CAA 72 bp | TCAATCTCCTTTTGGATCTTCCTCTTCACCTCAGGATaGTGCACCAGGAAAGCCAGGATCCAGTTCAGCACA | + |
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Preference number: 6 (lower is better) Translates to: SISFWIFLFTSG*CTRKARIQFST Trigger: TGTGCTGAACTGGATCCTGGCTTTCCTGGTGCACAATCCTGAGGTGAAGAGGAAGATCCAAAAGGAGATTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
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| CDS CAA 90 bp | ACATACTGGTCAATCTCCTTTTGGATCTTCCTCTTCACCTCAGGATaGTGCACCAGGAAAGCCAGGATCCAGTTCAGCACAGAGCTAGTT | + |
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Preference number: 6 (lower is better) Translates to: TYWSISFWIFLFTSG*CTRKARIQFSTELV Trigger: AACTAGCTCTGTGCTGAACTGGATCCTGGCTTTCCTGGTGCACAATCCTGAGGTGAAGAGGAAGATCCAAAAGGAGATTGACCAGTATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
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| CDS TCA 72 bp | GAAGAGAATAGATGGGACCATACTTTTCCTGCAGCTTaGAGAAGTTGGCATGCATATGACCACGTCTGGGGA | + |
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Preference number: 6 (lower is better) Translates to: EENRWDHTFPAA*RSWHAYDHVWG Trigger: TCCCCAGACGTGGTCATATGCATGCCAACTTCTTCAAGCTGCAGGAAAAGTATGGTCCCATCTATTCTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
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| CDS CAA 90 bp | CTTGGGTCCTGGCCTTCCCCAGTGTTATTATTTTCTGCATTCATCTaGGCTTGTATCAGAATGTCTGTCAGGCTGGAGAGAGATTCACTA | + |
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Preference number: 6 (lower is better) Translates to: LGSWPSPVLLFSAFI*ACIRMSVRLERDSL Trigger: TAGTGAATCTCTCTCCAGCCTGACAGACATTCTGATACAAGCCAAGATGAATGCAGAAAATAATAACACTGGGGAAGGCCAGGACCCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
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| CDS TCA 72 bp | GGACTCCCCGTCGTATGTAAGTATCAAGTCACACAGTaGGTTGGCTTCCTGACATATCATCTTCTCCAGTTT | + |
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Preference number: 6 (lower is better) Translates to: GLPVVCKYQVTQ*VGFLTYHLLQF Trigger: AAACTGGAGAAGATGATATGTCAGGAAGCCAACTCACTGTGTGACTTGATACTTACATACGACGGGGAGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
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| CDS TCA 72 bp | ATAAACCGATCTGGCTGGTCCCATTCATTTTTATCGTaGTGCAGTGCCCAGAGATTGATGATCACATGTGTG | + |
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Preference number: 6 (lower is better) Translates to: INRSGWSHSFLS*CSAQRLMITCV Trigger: CACACATGTGATCATCAATCTCTGGGCACTGCATCACGATAAAAATGAATGGGACCAGCCAGATCGGTTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
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| CDS CAA 72 bp | TGGCCTTCCCCAGTGTTATTATTTTCTGCATTCATCTaGGCTTGTATCAGAATGTCTGTCAGGCTGGAGAGA | + |
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Preference number: 6 (lower is better) Translates to: WPSPVLLFSAFI*ACIRMSVRLER Trigger: TCTCTCCAGCCTGACAGACATTCTGATACAAGCCAAGATGAATGCAGAAAATAATAACACTGGGGAAGGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
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| CDS CAA 90 bp | GTCCTGGCCTTCCCCAGTGTTATTATTTTCTGCATTCATCTTGGCTaGTATCAGAATGTCTGTCAGGCTGGAGAGAGATTCACTATTGAA | + |
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Preference number: 6 (lower is better) Translates to: VLAFPSVIIFCIHLG*YQNVCQAGERFTIE Trigger: TTCAATAGTGAATCTCTCTCCAGCCTGACAGACATTCTGATACAAGCCAAGATGAATGCAGAAAATAATAACACTGGGGAAGGCCAGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
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| CDS TCA 72 bp | TATGTAAGTATCAAGTCACACAGTGAGTTGGCTTCCTaGCATATCATCTTCTCCAGTTTCTGGTCATCCCTG | + |
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Preference number: 6 (lower is better) Translates to: YVSIKSHSELAS*HIIFSSFWSSL Trigger: CAGGGATGACCAGAAACTGGAGAAGATGATATGTCAGGAAGCCAACTCACTGTGTGACTTGATACTTACATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
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| CDS CCA 72 bp | ACAAGGATATGCTTATCTGAGAACACACTTGGGTCCTaGCCTTCCCCAGTGTTATTATTTTCTGCATTCATC | + |
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Preference number: 6 (lower is better) Translates to: TRICLSENTLGS*PSPVLLFSAFI Trigger: GATGAATGCAGAAAATAATAACACTGGGGAAGGCCAGGACCCAAGTGTGTTCTCAGATAAGCATATCCTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
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| CDS CAA 90 bp | TCCTTGTTCTCAAAAGAGATGTTGAAGCAGATGGTACAGATGATATaGATTACTGACTTGAAGATGAGCGTAGACAGATCTCGGGACTCC | + |
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Preference number: 6 (lower is better) Translates to: SLFSKEMLKQMVQMI*ITDLKMSVDRSRDS Trigger: GGAGTCCCGAGATCTGTCTACGCTCATCTTCAAGTCAGTAATCAATATCATCTGTACCATCTGCTTCAACATCTCTTTTGAGAACAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
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| CDS CAA 72 bp | TCTGTAAAGGTCTGTATGGTAGTCAGTATCGGATCCTaGTTCTCAAAAGAGATGTTGAAGCAGATGGTACAG | + |
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Preference number: 6 (lower is better) Translates to: SVKVCMVVSIGS*FSKEMLKQMVQ Trigger: CTGTACCATCTGCTTCAACATCTCTTTTGAGAACAAGGATCCGATACTGACTACCATACAGACCTTTACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
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| CDS CAA 72 bp | TTCCCCAGTGTTATTATTTTCTGCATTCATCTTGGCTaGTATCAGAATGTCTGTCAGGCTGGAGAGAGATTC | + |
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Preference number: 6 (lower is better) Translates to: FPSVIIFCIHLG*YQNVCQAGERF Trigger: GAATCTCTCTCCAGCCTGACAGACATTCTGATACAAGCCAAGATGAATGCAGAAAATAATAACACTGGGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
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| CDS CAA 90 bp | GTCTGTATGGTAGTCAGTATCGGATCCTTGTTCTCAAAAGAGATGTaGAAGCAGATGGTACAGATGATATTGATTACTGACTTGAAGATG | + |
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Preference number: 6 (lower is better) Translates to: VCMVVSIGSLFSKEM*KQMVQMILITDLKM Trigger: CATCTTCAAGTCAGTAATCAATATCATCTGTACCATCTGCTTCAACATCTCTTTTGAGAACAAGGATCCGATACTGACTACCATACAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
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| CDS CAA 72 bp | TCAAAAGAGATGTTGAAGCAGATGGTACAGATGATATaGATTACTGACTTGAAGATGAGCGTAGACAGATCT | + |
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Preference number: 6 (lower is better) Translates to: SKEMLKQMVQMI*ITDLKMSVDRS Trigger: AGATCTGTCTACGCTCATCTTCAAGTCAGTAATCAATATCATCTGTACCATCTGCTTCAACATCTCTTTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026012.8 ENSMUST00000236174.2 |
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