RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CYLD (Mus musculus)

Ensembl gene IDs: ENSMUSG00000036712

Ensembl transcript IDs: ENSMUST00000043526.15, ENSMUST00000098519.11, ENSMUST00000109626.4, ENSMUST00000209206.2, ENSMUST00000209532.2, ENSMUST00000209559.2, ENSMUST00000211554.2

Found 701 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTCCAGAGGGACAAGAAGGCATGGGAGAGAGCTCCCGCTGGCCTGTaGTTCTCAGGCCTCCCCAGCCACTGCAAGTGGGTGTTCCGCTGT +
Preference number: 1 (lower is better)
Translates to: VQRDKKAWERAPAGL*FSGLPSHCKWVFRC
Trigger: ACAGCGGAACACCCACTTGCAGTGGCTGGGGAGGCCTGAGAAGCACAGGCCAGCGGGAGCTCTCTCCCATGCCTTCTTGTCCCTCTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR CCA 90 bp AGGGGCTGTCCAGAGGGACAAGAAGGCATGGGAGAGAGCTCCCGCTaGCCTGTGCTTCTCAGGCCTCCCCAGCCACTGCAAGTGGGTGTT +
Preference number: 1 (lower is better)
Translates to: RGCPEGQEGMGESSR*PVLLRPPQPLQVGV
Trigger: AACACCCACTTGCAGTGGCTGGGGAGGCCTGAGAAGCACAGGCCAGCGGGAGCTCTCTCCCATGCCTTCTTGTCCCTCTGGACAGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR GCA 90 bp ATCCACAGGCACGAGGGCTATCTGCACCACACAGTCCAACCCTATTaGCCCAGGGGCAAACCAGGCTCTGCTGGGACAAGGAATGAGGAG +
Preference number: 1 (lower is better)
Translates to: IHRHEGYLHHTVQPY*PRGKPGSAGTRNEE
Trigger: CTCCTCATTCCTTGTCCCAGCAGAGCCTGGTTTGCCCCTGGGGCAATAGGGTTGGACTGTGTGGTGCAGATAGCCCTCGTGCCTGTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR GCA 90 bp GCTTCTCAGGCCTCCCCAGCCACTGCAAGTGGGTGTTCCGCTGTGTaGCCCTACCCAGCCACTACTGCTAAAGAACACAGTGCAATTTCG +
Preference number: 1 (lower is better)
Translates to: ASQASPATASGCSAV*PYPATTAKEHSAIS
Trigger: CGAAATTGCACTGTGTTCTTTAGCAGTAGTGGCTGGGTAGGGGCACACAGCGGAACACCCACTTGCAGTGGCTGGGGAGGCCTGAGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR GCA 90 bp CAGATTCTCACACAGGAGCAAGGGAAAGCCCCTCACAGGAAGCCATaGTCTGACACCTTTGACAAGAGGGCCAATGCCCAGAGCCACAGG +
Preference number: 1 (lower is better)
Translates to: QILTQEQGKAPHRKP*SDTFDKRANAQSHR
Trigger: CCTGTGGCTCTGGGCATTGGCCCTCTTGTCAAAGGTGTCAGAGCATGGCTTCCTGTGAGGGGCTTTCCCTTGCTCCTGTGTGAGAATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR GCA 90 bp GCTGAAGGGCCATCATCAAAAGAGACACCCATTGCCGGCAATGGGTaGCGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTT +
Preference number: 1 (lower is better)
Translates to: AEGPSSKETPIAGNG*RTEPQAGGRHSTKV
Trigger: AACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCTTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
3UTR GCA 90 bp CTCACTGGCTCCCACTATAACAGCCTCTTCTCCACCCACCCAGGCTaGACTATGGAACTAAAGAATTCCTTCACTGGTGAAGAGCTGGAA +
Preference number: 1 (lower is better)
Translates to: LTGSHYNSLFSTHPG*TMELKNSFTGEELE
Trigger: TTCCAGCTCTTCACCAGTGAAGGAATTCTTTAGTTCCATAGTGCAGCCTGGGTGGGTGGAGAAGAGGCTGTTATAGTGGGAGCCAGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR CCA 90 bp GGCCACCAGAAAGGGCTTATCACCCACAATACCACTGTTCACTACTaGCCAATTCTGCTTCTCACCCTCTGGCACTGCATTTGGACTCAA +
Preference number: 1 (lower is better)
Translates to: GHQKGLITHNTTVHY*PILLLTLWHCIWTQ
Trigger: TTGAGTCCAAATGCAGTGCCAGAGGGTGAGAAGCAGAATTGGCCAGTAGTGAACAGTGGTATTGTGGGTGATAAGCCCTTTCTGGTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR TCA 90 bp CACAGAATAACTGCCGTGGATAACAGTAACAGAAGAAGGGGTCTTTaGAGCCTTCCAGCCTTATGGCTCCATACCTGCTGCTGGTCACTG +
Preference number: 1 (lower is better)
Translates to: HRITAVDNSNRRRGL*SLPALWLHTCCWSL
Trigger: CAGTGACCAGCAGCAGGTATGGAGCCATAAGGCTGGAAGGCTTCAAAGACCCCTTCTTCTGTTACTGTTATCCACGGCAGTTATTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR CCA 90 bp AGAACACAGTGCAATTTCGAGACGATCTTGCTTAGGGATTGCCTGTaGACATGGTCCTCCTCACTCACAAAGTGCCACCCCAACTTCAGA +
Preference number: 1 (lower is better)
Translates to: RTQCNFETILLRDCL*TWSSSLTKCHPNFR
Trigger: TCTGAAGTTGGGGTGGCACTTTGTGAGTGAGGAGGACCATGTCCACAGGCAATCCCTAAGCAAGATCGTCTCGAAATTGCACTGTGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR GCA 90 bp AAGGGCTTATCACCCACAATACCACTGTTCACTACTGGCCAATTCTaGTTCTCACCCTCTGGCACTGCATTTGGACTCAAGAGAACCCTT +
Preference number: 1 (lower is better)
Translates to: KGLSPTIPLFTTGQF*FSPSGTAFGLKRTL
Trigger: AAGGGTTCTCTTGAGTCCAAATGCAGTGCCAGAGGGTGAGAAGCAGAATTGGCCAGTAGTGAACAGTGGTATTGTGGGTGATAAGCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR TCA 90 bp TTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATAAGATCTaGTGCCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTGTACTCA +
Preference number: 1 (lower is better)
Translates to: FPATTWWLTTICNKI*CPLLVCLKTATVYS
Trigger: TGAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGGCATCAGATCTTATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
3UTR TCA 90 bp CTCACAAAGTGCCACCCCAACTTCAGAACCACTGCAAACAAGCTTTaGGTCCTCTGCTCTGAAAGCCAAGTAGCTAGTCTCTTTGCACAT +
Preference number: 1 (lower is better)
Translates to: LTKCHPNFRTTANKL*VLCSESQVASLFAH
Trigger: ATGTGCAAAGAGACTAGCTACTTGGCTTTCAGAGCAGAGGACTCAAAGCTTGTTTGCAGTGGTTCTGAAGTTGGGGTGGCACTTTGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR TCA 90 bp CACCCACCCAGGCTGCACTATGGAACTAAAGAATTCCTTCACTGGTaGAGAGCTGGAATCACAAAGACCAAGGAAAGCCACCTTGTTTGT +
Preference number: 1 (lower is better)
Translates to: HPPRLHYGTKEFLHW*RAGITKTKESHLVC
Trigger: ACAAACAAGGTGGCTTTCCTTGGTCTTTGTGATTCCAGCTCTTCACCAGTGAAGGAATTCTTTAGTTCCATAGTGCAGCCTGGGTGGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR TCA 90 bp GGCTCCATACCTGCTGCTGGTCACTGTTTTCTGTGGATGAGCTTCTaGGTTGAAATTTCCTACCTCCAGCAAAAACTCAGATGTATCAGG +
Preference number: 1 (lower is better)
Translates to: GSIPAAGHCFLWMSF*VEISYLQQKLRCIR
Trigger: CCTGATACATCTGAGTTTTTGCTGGAGGTAGGAAATTTCAACTCAGAAGCTCATCCACAGAAAACAGTGACCAGCAGCAGGTATGGAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR GCA 90 bp ATAAATACTTGTTGGCAGTTACTCACCAGGCCAAGTACGGGGTTTTaGACTCCCAACTCAGTGCAGGAAGATGCAAACAGATGCAAGCTT +
Preference number: 1 (lower is better)
Translates to: INTCWQLLTRPSTGF*TPNSVQEDANRCKL
Trigger: AAGCTTGCATCTGTTTGCATCTTCCTGCACTGAGTTGGGAGTGCAAAACCCCGTACTTGGCCTGGTGAGTAACTGCCAACAAGTATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR TCA 90 bp CATACCTGCTGCTGGTCACTGTTTTCTGTGGATGAGCTTCTGAGTTaGAATTTCCTACCTCCAGCAAAAACTCAGATGTATCAGGCATGG +
Preference number: 1 (lower is better)
Translates to: HTCCWSLFSVDELLS*NFLPPAKTQMYQAW
Trigger: CCATGCCTGATACATCTGAGTTTTTGCTGGAGGTAGGAAATTTCAACTCAGAAGCTCATCCACAGAAAACAGTGACCAGCAGCAGGTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR TCA 90 bp AGCCTTATGGCTCCATACCTGCTGCTGGTCACTGTTTTCTGTGGATaGGCTTCTGAGTTGAAATTTCCTACCTCCAGCAAAAACTCAGAT +
Preference number: 1 (lower is better)
Translates to: SLMAPYLLLVTVFCG*ASELKFPTSSKNSD
Trigger: ATCTGAGTTTTTGCTGGAGGTAGGAAATTTCAACTCAGAAGCTCATCCACAGAAAACAGTGACCAGCAGCAGGTATGGAGCCATAAGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR GCA 90 bp GCAAGTGATGGAGAAAGAACCCAGGATTTTTGTCTCTTAGTCCTTTaGAATAAGGTTACACTAGGTTGTCTCCCAAAGTGGTCCCCAGAC +
Preference number: 1 (lower is better)
Translates to: ASDGERTQDFCLLVL*NKVTLGCLPKWSPD
Trigger: GTCTGGGGACCACTTTGGGAGACAACCTAGTGTAACCTTATTGCAAAGGACTAAGAGACAAAAATCCTGGGTTCTTTCTCCATCACTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR TCA 90 bp GAAACTCAAGAAATCGAGGTGGTGTTCATTCAGCTACAGAGCAAGTaGTGGAGAAAGAACCCAGGATTTTTGTCTCTTAGTCCTTTGCAA +
Preference number: 1 (lower is better)
Translates to: ETQEIEVVFIQLQSK*WRKNPGFLSLSPLQ
Trigger: TTGCAAAGGACTAAGAGACAAAAATCCTGGGTTCTTTCTCCATCACTTGCTCTGTAGCTGAATGAACACCACCTCGATTTCTTGAGTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR CCA 90 bp AAATTTCCTACCTCCAGCAAAAACTCAGATGTATCAGGCATGGCCTaGAACCCTAACAATTTGTACCGCTTATCCAACTACATATCCAAC +
Preference number: 1 (lower is better)
Translates to: KFPTSSKNSDVSGMA*NPNNLYRLSNYISN
Trigger: GTTGGATATGTAGTTGGATAAGCGGTACAAATTGTTAGGGTTCCAGGCCATGCCTGATACATCTGAGTTTTTGCTGGAGGTAGGAAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR TCA 90 bp AGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTCCTCTCCAAGGTTTACCACAGGGAACTGTGCTaGGGCCCCTGGTGCCTGGGA +
Preference number: 2 (lower is better)
Translates to: STWYISSHSRAPLLSKVYHRELC*GPWCLG
Trigger: TCCCAGGCACCAGGGGCCTCAGCACAGTTCCCTGTG...GTAAACCTTGGAGAGGAGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR CCA 90 bp AAAAGCACAGGGAACTGTGCTGAGGCCCCTGGTGCCTGGGAGGATAATCCCTTCACTGGGGGTAGGGAGTaGGGCGGGAAAATCTTCCCA +
Preference number: 2 (lower is better)
Translates to: KSTGNCAEAPGAWEDNPFTGGRE*GGKIFP
Trigger: TGGGAAGATTTTCCCGCCCCACTCCCTACCCCCAGT...GAAGGGATTATCCTCCCAGGCACCAGGGGCCTCAGCACAGTTCCCTGTGCTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR GCA 90 bp AAGGTTACACTAGGTTGTCTCCCAAAGTGGTCCCCAGACATGCCTGTCACCCATGGCCTCCCCAGCCACTaGAAGTGGGTGTTCCGCTGT +
Preference number: 2 (lower is better)
Translates to: KVTLGCLPKWSPDMPVTHGLPSH*KWVFRC
Trigger: ACAGCGGAACACCCACTTGCAGTGGCTGGGGAGGCC...ATGGGTGACAGGCATGTCTGGGGACCACTTTGGGAGACAACCTAGTGTAACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR GCA 90 bp AACACATACTGCACTCCTTTGGGTCAGCTTGATAATAACCACCTCCCTGGAGAGGCTCCCGCTGGCCTGTaGTTCTCAGGCCTCCCCAGC +
Preference number: 2 (lower is better)
Translates to: NTYCTPLGQLDNNHLPGEAPAGL*FSGLPS
Trigger: GCTGGGGAGGCCTGAGAAGCACAGGCCAGCGGGAGC...CTCTCCAGGGAGGTGGTTATTATCAAGCTGACCCAAAGGAGTGCAGTATGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR GCA 90 bp CAACCCTCTTTGCTCACTGGCTCCCACTATAACAGCCTCTTCTCCACCCACCCAAGTGGTCCCCAGACATaGCTGTCACCCATGCCTAGG +
Preference number: 2 (lower is better)
Translates to: QPSLLTGSHYNSLFSTHPSGPQT*LSPMPR
Trigger: CCTAGGCATGGGTGACAGGCATGTCTGGGGACCACT...TGGGTGGGTGGAGAAGAGGCTGTTATAGTGGGAGCCAGTGAGCAAAGAGGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR TCA 90 bp AAGGTTACACTAGGTTGTCTCCCAAAGTGGTCCCCAGACATGCCTGTCACCCATTGCTGGGACAAGGAATaGGGAGGGGCTGTCCAGAGG +
Preference number: 2 (lower is better)
Translates to: KVTLGCLPKWSPDMPVTHCWDKE*GGAVQR
Trigger: CCTCTGGACAGCCCCTCCTCATTCCTTGTCCCAGCA...ATGGGTGACAGGCATGTCTGGGGACCACTTTGGGAGACAACCTAGTGTAACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR TCA 90 bp AACACATACTGCACTCCTTTGGGTCAGCTTGATAATAACCACCTCCCTGGAGAGCACAGGGAACTGTGCTaGGGCCCCTGGTGCCTGGGA +
Preference number: 2 (lower is better)
Translates to: NTYCTPLGQLDNNHLPGEHRELC*GPWCLG
Trigger: TCCCAGGCACCAGGGGCCTCAGCACAGTTCCCTGTG...CTCTCCAGGGAGGTGGTTATTATCAAGCTGACCCAAAGGAGTGCAGTATGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR CAA 90 bp CACAGGAATCCTTTGCTGAAGGGCCATCATCAAAAGAGACACCCATaGCCGGCAATGGGTGCCGGACAGAACCACAAGCTGGAGGAAGAC +
Preference number: 2 (lower is better)
Translates to: HRNPLLKGHHQKRHP*PAMGAGQNHKLEED
Trigger: GTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCTTCAGCAAAGGATTCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
3UTR-3UTR GCA 90 bp AAAAGCACAGGGAACTGTGCTGAGGCCCCTGGTGCCTGGGAGGATAATCCCTTCGTTAAGAGCACTGACTaGCCTTCCAAAGGTCCTGAG +
Preference number: 2 (lower is better)
Translates to: KSTGNCAEAPGAWEDNPFVKSTD*PSKGPE
Trigger: CTCAGGACCTTTGGAAGGGCAGTCAGTGCTCTTAAC...GAAGGGATTATCCTCCCAGGCACCAGGGGCCTCAGCACAGTTCCCTGTGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR GCA 90 bp AACACATACTGCACTCCTTTGGGTCAGCTTGATAATAACCACCTCCCTGGAGAGGGCCTCCCCAGCCACTaGAAGTGGGTGTTCCGCTGT +
Preference number: 2 (lower is better)
Translates to: NTYCTPLGQLDNNHLPGEGLPSH*KWVFRC
Trigger: ACAGCGGAACACCCACTTGCAGTGGCTGGGGAGGCC...CTCTCCAGGGAGGTGGTTATTATCAAGCTGACCCAAAGGAGTGCAGTATGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR GCA 90 bp AGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTCCTCTCCAAGGTTTACAGTGGTCCCCAGACATaGCTGTCACCCATGCCTAGG +
Preference number: 2 (lower is better)
Translates to: STWYISSHSRAPLLSKVYSGPQT*LSPMPR
Trigger: CCTAGGCATGGGTGACAGGCATGTCTGGGGACCACT...GTAAACCTTGGAGAGGAGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR GCA 90 bp AAAAGCACAGGGAACTGTGCTGAGGCCCCTGGTGCCTGGGAGGATAATCCCTTCCTCACCCTCTGGCACTaGATTTGGACTCAAGAGAAC +
Preference number: 2 (lower is better)
Translates to: KSTGNCAEAPGAWEDNPFLTLWH*IWTQEN
Trigger: GTTCTCTTGAGTCCAAATGCAGTGCCAGAGGGTGAG...GAAGGGATTATCCTCCCAGGCACCAGGGGCCTCAGCACAGTTCCCTGTGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR TCA 90 bp CAACCCTCTTTGCTCACTGGCTCCCACTATAACAGCCTCTTCTCCACCCACCCACAGCTACAGAGCAAGTaGTGGAGAAAGAACCCAGGA +
Preference number: 2 (lower is better)
Translates to: QPSLLTGSHYNSLFSTHPQLQSK*WRKNPG
Trigger: TCCTGGGTTCTTTCTCCATCACTTGCTCTGTAGCTG...TGGGTGGGTGGAGAAGAGGCTGTTATAGTGGGAGCCAGTGAGCAAAGAGGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR GCA 90 bp AGCTACAGAGCAAGTGATGGAGAAAGAACCCAGGATTTTTGTCTCTTAGTCCTTGCTCCCGCTGGCCTGTaGTTCTCAGGCCTCCCCAGC +
Preference number: 2 (lower is better)
Translates to: SYRASDGERTQDFCLLVLAPAGL*FSGLPS
Trigger: GCTGGGGAGGCCTGAGAAGCACAGGCCAGCGGGAGC...AAGGACTAAGAGACAAAAATCCTGGGTTCTTTCTCCATCACTTGCTCTGTAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR GCA 90 bp AAAAGCACAGGGAACTGTGCTGAGGCCCCTGGTGCCTGGGAGGATAATCCCTTCGCACTCCCAACTCAGTaGAGGAAGATGCAAACAGAT +
Preference number: 2 (lower is better)
Translates to: KSTGNCAEAPGAWEDNPFALPTQ*RKMQTD
Trigger: ATCTGTTTGCATCTTCCTGCACTGAGTTGGGAGTGC...GAAGGGATTATCCTCCCAGGCACCAGGGGCCTCAGCACAGTTCCCTGTGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR GCA 90 bp AAAAGCACAGGGAACTGTGCTGAGGCCCCTGGTGCCTGGGAGGATAATCCCTTCTCCACCCACCCAGGCTaGACTATGGAACTAAAGAAT +
Preference number: 2 (lower is better)
Translates to: KSTGNCAEAPGAWEDNPFSTHPG*TMELKN
Trigger: ATTCTTTAGTTCCATAGTGCAGCCTGGGTGGGTGGA...GAAGGGATTATCCTCCCAGGCACCAGGGGCCTCAGCACAGTTCCCTGTGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR TCA 90 bp AACACATACTGCACTCCTTTGGGTCAGCTTGATAATAACCACCTCCCTGGAGAGTCCTATTCTGACCTGTaGCTGGGGGTAGGGAGTGGG +
Preference number: 2 (lower is better)
Translates to: NTYCTPLGQLDNNHLPGESYSDL*LGVGSG
Trigger: CCCACTCCCTACCCCCAGTCACAGGTCAGAATAGGA...CTCTCCAGGGAGGTGGTTATTATCAAGCTGACCCAAAGGAGTGCAGTATGTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR CCA 90 bp AACACATACTGCACTCCTTTGGGTCAGCTTGATAATAACCACCTCCCTGGAGAGACTGGGGGTAGGGAGTaGGGCGGGAAAATCTTCCCA +
Preference number: 2 (lower is better)
Translates to: NTYCTPLGQLDNNHLPGETGGRE*GGKIFP
Trigger: TGGGAAGATTTTCCCGCCCCACTCCCTACCCCCAGT...CTCTCCAGGGAGGTGGTTATTATCAAGCTGACCCAAAGGAGTGCAGTATGTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR TCA 90 bp AAAAGCACAGGGAACTGTGCTGAGGCCCCTGGTGCCTGGGAGGATAATCCCTTCCAAGCAGTCCTAAGATaGCATCCATTTTCTCCTTTG +
Preference number: 2 (lower is better)
Translates to: KSTGNCAEAPGAWEDNPFQAVLR*HPFSPL
Trigger: CAAAGGAGAAAATGGATGTCATCTTAGGACTGCTTG...GAAGGGATTATCCTCCCAGGCACCAGGGGCCTCAGCACAGTTCCCTGTGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR TCA 90 bp AGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTCCTCTCCAAGGTTTACCAGCTACAGAGCAAGTaGTGGAGAAAGAACCCAGGA +
Preference number: 2 (lower is better)
Translates to: STWYISSHSRAPLLSKVYQLQSK*WRKNPG
Trigger: TCCTGGGTTCTTTCTCCATCACTTGCTCTGTAGCTG...GTAAACCTTGGAGAGGAGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR GCA 90 bp AGCTACAGAGCAAGTGATGGAGAAAGAACCCAGGATTTTTGTCTCTTAGTCCTTGGCCTCCCCAGCCACTaGAAGTGGGTGTTCCGCTGT +
Preference number: 2 (lower is better)
Translates to: SYRASDGERTQDFCLLVLGLPSH*KWVFRC
Trigger: ACAGCGGAACACCCACTTGCAGTGGCTGGGGAGGCC...AAGGACTAAGAGACAAAAATCCTGGGTTCTTTCTCCATCACTTGCTCTGTAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR GCA 90 bp CAACCCTCTTTGCTCACTGGCTCCCACTATAACAGCCTCTTCTCCACCCACCCATTTGGATTAAAAATGTaGCTGGGCCCCTTTCCTCTC +
Preference number: 2 (lower is better)
Translates to: QPSLLTGSHYNSLFSTHPFGLKM*LGPFPL
Trigger: GAGAGGAAAGGGGCCCAGGCACATTTTTAATCCAAA...TGGGTGGGTGGAGAAGAGGCTGTTATAGTGGGAGCCAGTGAGCAAAGAGGGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR CCA 90 bp CAACCCTCTTTGCTCACTGGCTCCCACTATAACAGCCTCTTCTCCACCCACCCACAGCTTCACTTTCTCTaGACTGTGGGTCTGTATAAG +
Preference number: 2 (lower is better)
Translates to: QPSLLTGSHYNSLFSTHPQLHFL*TVGLYK
Trigger: CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTG...TGGGTGGGTGGAGAAGAGGCTGTTATAGTGGGAGCCAGTGAGCAAAGAGGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR CCA 90 bp CAACCCTCTTTGCTCACTGGCTCCCACTATAACAGCCTCTTCTCCACCCACCCATCACTGGTGAAGAGCTaGAATCACAAAGACCAAGGA +
Preference number: 2 (lower is better)
Translates to: QPSLLTGSHYNSLFSTHPSLVKS*NHKDQG
Trigger: TCCTTGGTCTTTGTGATTCCAGCTCTTCACCAGTGA...TGGGTGGGTGGAGAAGAGGCTGTTATAGTGGGAGCCAGTGAGCAAAGAGGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR TCA 90 bp AACACATACTGCACTCCTTTGGGTCAGCTTGATAATAACCACCTCCCTGGAGAGCCCTTCCAAAGGTCCTaGGTTCAATTCCCAGCAACC +
Preference number: 2 (lower is better)
Translates to: NTYCTPLGQLDNNHLPGEPFQRS*VQFPAT
Trigger: GGTTGCTGGGAATTGAACTCAGGACCTTTGGAAGGG...CTCTCCAGGGAGGTGGTTATTATCAAGCTGACCCAAAGGAGTGCAGTATGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR TCA 90 bp CAACCCTCTTTGCTCACTGGCTCCCACTATAACAGCCTCTTCTCCACCCACCCATGTCATTGTTTCAAGTaGCACCAAACTGACACCAGA +
Preference number: 2 (lower is better)
Translates to: QPSLLTGSHYNSLFSTHPCHCFK*HQTDTR
Trigger: TCTGGTGTCAGTTTGGTGTCACTTGAAACAATGACA...TGGGTGGGTGGAGAAGAGGCTGTTATAGTGGGAGCCAGTGAGCAAAGAGGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR TCA 90 bp CAACCCTCTTTGCTCACTGGCTCCCACTATAACAGCCTCTTCTCCACCCACCCACAAGCAGTCCTAAGATaGCATCCATTTTCTCCTTTG +
Preference number: 2 (lower is better)
Translates to: QPSLLTGSHYNSLFSTHPQAVLR*HPFSPL
Trigger: CAAAGGAGAAAATGGATGTCATCTTAGGACTGCTTG...TGGGTGGGTGGAGAAGAGGCTGTTATAGTGGGAGCCAGTGAGCAAAGAGGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR GCA 90 bp TTAATGATACAGAAAGAGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTAGTGGTCCCCAGACATaGCTGTCACCCATGCCTAGG +
Preference number: 2 (lower is better)
Translates to: LMIQKEYMVHLFSQPRSTSGPQT*LSPMPR
Trigger: CCTAGGCATGGGTGACAGGCATGTCTGGGGACCACT...AGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACTCTTTCTGTATCATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR TCA 90 bp AGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTCCTCTCCAAGGTTTACGATGAGCTTCTGAGTTaGAATTTCCTACCTCCAGCA +
Preference number: 2 (lower is better)
Translates to: STWYISSHSRAPLLSKVYDELLS*NFLPPA
Trigger: TGCTGGAGGTAGGAAATTTCAACTCAGAAGCTCATC...GTAAACCTTGGAGAGGAGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR TCA 90 bp AACACATACTGCACTCCTTTGGGTCAGCTTGATAATAACCACCTCCCTGGAGAGAAGGAAATCCTATTCTaGCCTGTGACTGGGGGTAGG +
Preference number: 2 (lower is better)
Translates to: NTYCTPLGQLDNNHLPGEKEILF*PVTGGR
Trigger: CCTACCCCCAGTCACAGGTCAGAATAGGATTTCCTT...CTCTCCAGGGAGGTGGTTATTATCAAGCTGACCCAAAGGAGTGCAGTATGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR TCA 90 bp AAGGTTTACAAAATTAAGGCCAAACTGGAGCATTCTGATAGCAAGGGATTGTTTCACAGGGAACTGTGCTaGGGCCCCTGGTGCCTGGGA +
Preference number: 2 (lower is better)
Translates to: KVYKIKAKLEHSDSKGLFHRELC*GPWCLG
Trigger: TCCCAGGCACCAGGGGCCTCAGCACAGTTCCCTGTG...AAACAATCCCTTGCTATCAGAATGCTCCAGTTTGGCCTTAATTTTGTAAACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR GCA 90 bp CATAAATACTTGTTGGCAGTTACTCACCAGGCCAAGTACGGGGTTTTGCACTCCGTTAAGAGCACTGACTaGCCTTCCAAAGGTCCTGAG +
Preference number: 2 (lower is better)
Translates to: HKYLLAVTHQAKYGVLHSVKSTD*PSKGPE
Trigger: CTCAGGACCTTTGGAAGGGCAGTCAGTGCTCTTAAC...GGAGTGCAAAACCCCGTACTTGGCCTGGTGAGTAACTGCCAACAAGTATTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR GCA 90 bp AACACATACTGCACTCCTTTGGGTCAGCTTGATAATAACCACCTCCCTGGAGAGTGGCTCCATACCTGCTaGTGGTCACTGTTTTCTGTG +
Preference number: 2 (lower is better)
Translates to: NTYCTPLGQLDNNHLPGEWLHTC*WSLFSV
Trigger: CACAGAAAACAGTGACCAGCAGCAGGTATGGAGCCA...CTCTCCAGGGAGGTGGTTATTATCAAGCTGACCCAAAGGAGTGCAGTATGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR CCA 90 bp AAAAGCACAGGGAACTGTGCTGAGGCCCCTGGTGCCTGGGAGGATAATCCCTTCTACACGCCAGCAAAATaGAATAATAAAACCAAGGAG +
Preference number: 2 (lower is better)
Translates to: KSTGNCAEAPGAWEDNPFYTPAK*NNKTKE
Trigger: CTCCTTGGTTTTATTATTCCATTTTGCTGGCGTGTA...GAAGGGATTATCCTCCCAGGCACCAGGGGCCTCAGCACAGTTCCCTGTGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR CCA 90 bp AGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTCCTCTCCAAGGTTTACCTCTGGCACTGCATTTaGACTCAAGAGAACCCTTTT +
Preference number: 2 (lower is better)
Translates to: STWYISSHSRAPLLSKVYLWHCI*TQENPF
Trigger: AAAAGGGTTCTCTTGAGTCCAAATGCAGTGCCAGAG...GTAAACCTTGGAGAGGAGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR CAA 90 bp CATAAATACTTGTTGGCAGTTACTCACCAGGCCAAGTACGGGGTTTaGCACTCCCAACTCAGTGCAGGAAGATGCAAACAGATGCAAGCT +
Preference number: 2 (lower is better)
Translates to: HKYLLAVTHQAKYGV*HSQLSAGRCKQMQA
Trigger: AGCTTGCATCTGTTTGCATCTTCCTGCACTGAGTTGGGAGTGCAAAACCCCGTACTTGGCCTGGTGAGTAACTGCCAACAAGTATTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR TCA 90 bp CATAAATACTTGTTGGCAGTTACTCACCAGGCCAAGTACGGGGTTTTGCACTCCACTGCAAACAAGCTTTaGGTCCTCTGCTCTGAAAGC +
Preference number: 2 (lower is better)
Translates to: HKYLLAVTHQAKYGVLHSTANKL*VLCSES
Trigger: GCTTTCAGAGCAGAGGACTCAAAGCTTGTTTGCAGT...GGAGTGCAAAACCCCGTACTTGGCCTGGTGAGTAACTGCCAACAAGTATTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR TCA 90 bp AGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTCCTCTCCAAGGTTTACCCTTGTTCATCCTCCTaGCTCTCCATACATATATAC +
Preference number: 2 (lower is better)
Translates to: STWYISSHSRAPLLSKVYPCSSS*LSIHIY
Trigger: GTATATATGTATGGAGAGTCAGGAGGATGAACAAGG...GTAAACCTTGGAGAGGAGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR GCA 90 bp TTGGTGCTAACTCTGAGCCAGCTTCACTTTCTCTGGACTGTGGGTCTGTATAAGGCATGTTCTGACCACTaGTGCAGGAACACAGAAACT +
Preference number: 2 (lower is better)
Translates to: LVLTLSQLHFLWTVGLYKACSDH*CRNTET
Trigger: AGTTTCTGTGTTCCTGCAGCAGTGGTCAGAACATGC...CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
3UTR-3UTR GCA 90 bp AAGGTTACACTAGGTTGTCTCCCAAAGTGGTCCCCAGACATGCCTGTCACCCATCAACTTCAGAACCACTaGAAACAAGCTTTGAGTCCT +
Preference number: 2 (lower is better)
Translates to: KVTLGCLPKWSPDMPVTHQLQNH*KQALSP
Trigger: AGGACTCAAAGCTTGTTTGCAGTGGTTCTGAAGTTG...ATGGGTGACAGGCATGTCTGGGGACCACTTTGGGAGACAACCTAGTGTAACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR GCA 90 bp AGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTCCTCTCCAAGGTTTACCAACTTCAGAACCACTaGAAACAAGCTTTGAGTCCT +
Preference number: 2 (lower is better)
Translates to: STWYISSHSRAPLLSKVYQLQNH*KQALSP
Trigger: AGGACTCAAAGCTTGTTTGCAGTGGTTCTGAAGTTG...GTAAACCTTGGAGAGGAGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR TCA 90 bp TTAATGATACAGAAAGAGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTCAGCTACAGAGCAAGTaGTGGAGAAAGAACCCAGGA +
Preference number: 2 (lower is better)
Translates to: LMIQKEYMVHLFSQPRSTQLQSK*WRKNPG
Trigger: TCCTGGGTTCTTTCTCCATCACTTGCTCTGTAGCTG...AGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACTCTTTCTGTATCATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR TCA 90 bp AACACATACTGCACTCCTTTGGGTCAGCTTGATAATAACCACCTCCCTGGAGAGGATGAGCTTCTGAGTTaGAATTTCCTACCTCCAGCA +
Preference number: 2 (lower is better)
Translates to: NTYCTPLGQLDNNHLPGEDELLS*NFLPPA
Trigger: TGCTGGAGGTAGGAAATTTCAACTCAGAAGCTCATC...CTCTCCAGGGAGGTGGTTATTATCAAGCTGACCCAAAGGAGTGCAGTATGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR TCA 90 bp TTAATGATACAGAAAGAGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTAAGGAAATCCTATTCTaGCCTGTGACTGGGGGTAGG +
Preference number: 2 (lower is better)
Translates to: LMIQKEYMVHLFSQPRSTKEILF*PVTGGR
Trigger: CCTACCCCCAGTCACAGGTCAGAATAGGATTTCCTT...AGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACTCTTTCTGTATCATTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR TCA 90 bp AGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTCCTCTCCAAGGTTTACAGAACCAAAATATGCTaGAACAAACCCATCAGCACT +
Preference number: 2 (lower is better)
Translates to: STWYISSHSRAPLLSKVYRTKIC*NKPIST
Trigger: AGTGCTGATGGGTTTGTTTCAGCATATTTTGGTTCT...GTAAACCTTGGAGAGGAGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR GCA 90 bp AACACATACTGCACTCCTTTGGGTCAGCTTGATAATAACCACCTCCCTGGAGAGTTATGGCTCCATACCTaGTGCTGGTCACTGTTTTCT +
Preference number: 2 (lower is better)
Translates to: NTYCTPLGQLDNNHLPGELWLHT*CWSLFS
Trigger: AGAAAACAGTGACCAGCAGCAGGTATGGAGCCATAA...CTCTCCAGGGAGGTGGTTATTATCAAGCTGACCCAAAGGAGTGCAGTATGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR CCA 90 bp AACACATACTGCACTCCTTTGGGTCAGCTTGATAATAACCACCTCCCTGGAGAGCAGCTTCACTTTCTCTaGACTGTGGGTCTGTATAAG +
Preference number: 2 (lower is better)
Translates to: NTYCTPLGQLDNNHLPGEQLHFL*TVGLYK
Trigger: CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTG...CTCTCCAGGGAGGTGGTTATTATCAAGCTGACCCAAAGGAGTGCAGTATGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR CCA 90 bp AACACATACTGCACTCCTTTGGGTCAGCTTGATAATAACCACCTCCCTGGAGAGCCCATAAATACTTGTTaGCAGTTACTCACCAGGCCA +
Preference number: 2 (lower is better)
Translates to: NTYCTPLGQLDNNHLPGEPINTC*QLLTRP
Trigger: TGGCCTGGTGAGTAACTGCCAACAAGTATTTATGGG...CTCTCCAGGGAGGTGGTTATTATCAAGCTGACCCAAAGGAGTGCAGTATGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR TCA 90 bp AACACATACTGCACTCCTTTGGGTCAGCTTGATAATAACCACCTCCCTGGAGAGCAAGCAGTCCTAAGATaGCATCCATTTTCTCCTTTG +
Preference number: 2 (lower is better)
Translates to: NTYCTPLGQLDNNHLPGEQAVLR*HPFSPL
Trigger: CAAAGGAGAAAATGGATGTCATCTTAGGACTGCTTG...CTCTCCAGGGAGGTGGTTATTATCAAGCTGACCCAAAGGAGTGCAGTATGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR TCA 90 bp CATAAATACTTGTTGGCAGTTACTCACCAGGCCAAGTACGGGGTTTTGCACTCCAAATACTTTGTGAACTaGGCTGGACTCTCTGTGAAG +
Preference number: 2 (lower is better)
Translates to: HKYLLAVTHQAKYGVLHSKYFVN*AGLSVK
Trigger: CTTCACAGAGAGTCCAGCTCAGTTCACAAAGTATTT...GGAGTGCAAAACCCCGTACTTGGCCTGGTGAGTAACTGCCAACAAGTATTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR GCA 90 bp AAGGTTACACTAGGTTGTCTCCCAAAGTGGTCCCCAGACATGCCTGTCACCCATAGCAAAGTACAGACATaGAGGAAATCAGCACTATAT +
Preference number: 2 (lower is better)
Translates to: KVTLGCLPKWSPDMPVTHSKVQT*RKSALY
Trigger: ATATAGTGCTGATTTCCTGCATGTCTGTACTTTGCT...ATGGGTGACAGGCATGTCTGGGGACCACTTTGGGAGACAACCTAGTGTAACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR GCA 90 bp CATAAATACTTGTTGGCAGTTACTCACCAGGCCAAGTACGGGGTTTTGCACTCCCAACTTCAGAACCACTaGAAACAAGCTTTGAGTCCT +
Preference number: 2 (lower is better)
Translates to: HKYLLAVTHQAKYGVLHSQLQNH*KQALSP
Trigger: AGGACTCAAAGCTTGTTTGCAGTGGTTCTGAAGTTG...GGAGTGCAAAACCCCGTACTTGGCCTGGTGAGTAACTGCCAACAAGTATTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR GCA 90 bp TTAATGATACAGAAAGAGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTGCACTCCCAACTCAGTaGAGGAAGATGCAAACAGAT +
Preference number: 2 (lower is better)
Translates to: LMIQKEYMVHLFSQPRSTALPTQ*RKMQTD
Trigger: ATCTGTTTGCATCTTCCTGCACTGAGTTGGGAGTGC...AGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACTCTTTCTGTATCATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR GCA 90 bp TTAATGATACAGAAAGAGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTTCCACCCACCCAGGCTaGACTATGGAACTAAAGAAT +
Preference number: 2 (lower is better)
Translates to: LMIQKEYMVHLFSQPRSTSTHPG*TMELKN
Trigger: ATTCTTTAGTTCCATAGTGCAGCCTGGGTGGGTGGA...AGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACTCTTTCTGTATCATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR CCA 90 bp AAGGTTACACTAGGTTGTCTCCCAAAGTGGTCCCCAGACATGCCTGTCACCCATACACTTTGTAGCTTTTaGATTAAAAATGTGCCTGGG +
Preference number: 2 (lower is better)
Translates to: KVTLGCLPKWSPDMPVTHTLCSF*IKNVPG
Trigger: CCCAGGCACATTTTTAATCCAAAAGCTACAAAGTGT...ATGGGTGACAGGCATGTCTGGGGACCACTTTGGGAGACAACCTAGTGTAACCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR CCA 90 bp TTAATGATACAGAAAGAGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTCTCCATACCTGCTGCTaGTCACTGTTTTCTGTGGAT +
Preference number: 2 (lower is better)
Translates to: LMIQKEYMVHLFSQPRSTLHTCC*SLFSVD
Trigger: ATCCACAGAAAACAGTGACCAGCAGCAGGTATGGAG...AGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACTCTTTCTGTATCATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR CCA 90 bp AAGGTTTACAAAATTAAGGCCAAACTGGAGCATTCTGATAGCAAGGGATTGTTTACTGGGGGTAGGGAGTaGGGCGGGAAAATCTTCCCA +
Preference number: 2 (lower is better)
Translates to: KVYKIKAKLEHSDSKGLFTGGRE*GGKIFP
Trigger: TGGGAAGATTTTCCCGCCCCACTCCCTACCCCCAGT...AAACAATCCCTTGCTATCAGAATGCTCCAGTTTGGCCTTAATTTTGTAAACCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR CAA 90 bp ACTTCAGGAACACAAAAGCAATTTGTTTGGAAACACAGGAATCCTTaGCTGAAGGGCCATCATCAAAAGAGACACCCATTGCCGGCAATG +
Preference number: 2 (lower is better)
Translates to: TSGTQKQFVWKHRNP*LKGHHQKRHPLPAM
Trigger: CATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCTTCAGCAAAGGATTCCTGTGTTTCCAAACAAATTGCTTTTGTGTTCCTGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
3UTR CAA 90 bp TGTTCACTACTGGCCAATTCTGCTTCTCACCCTCTGGCACTGCATTaGGACTCAAGAGAACCCTTTTTAGCAAGTCTAGAGTTTAGAACA +
Preference number: 2 (lower is better)
Translates to: CSLLANSASHPLALH*DSREPFLASLEFRT
Trigger: TGTTCTAAACTCTAGACTTGCTAAAAAGGGTTCTCTTGAGTCCAAATGCAGTGCCAGAGGGTGAGAAGCAGAATTGGCCAGTAGTGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR TCA 90 bp CATAAATACTTGTTGGCAGTTACTCACCAGGCCAAGTACGGGGTTTTGCACTCCGCTACAAAAGGAAAATaGTTTCATATCCCTGGTCCA +
Preference number: 2 (lower is better)
Translates to: HKYLLAVTHQAKYGVLHSATKGK*FHIPGP
Trigger: TGGACCAGGGATATGAAATCATTTTCCTTTTGTAGC...GGAGTGCAAAACCCCGTACTTGGCCTGGTGAGTAACTGCCAACAAGTATTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR TCA 90 bp TTGGTGCTAACTCTGAGCCAGCTTCACTTTCTCTGGACTGTGGGTCTGTATAAGGCTACAAAAGGAAAATaGTTTCATATCCCTGGTCCA +
Preference number: 2 (lower is better)
Translates to: LVLTLSQLHFLWTVGLYKATKGK*FHIPGP
Trigger: TGGACCAGGGATATGAAATCATTTTCCTTTTGTAGC...CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
3UTR-3UTR TCA 90 bp CATAAATACTTGTTGGCAGTTACTCACCAGGCCAAGTACGGGGTTTTGCACTCCTTAGAAAATACTTTGTaGACTGAGCTGGACTCTCTG +
Preference number: 2 (lower is better)
Translates to: HKYLLAVTHQAKYGVLHSLENTL*TELDSL
Trigger: CAGAGAGTCCAGCTCAGTTCACAAAGTATTTTCTAA...GGAGTGCAAAACCCCGTACTTGGCCTGGTGAGTAACTGCCAACAAGTATTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR GCA 90 bp AGCTACAGAGCAAGTGATGGAGAAAGAACCCAGGATTTTTGTCTCTTAGTCCTTGCATGTTCTGACCACTaGTGCAGGAACACAGAAACT +
Preference number: 2 (lower is better)
Translates to: SYRASDGERTQDFCLLVLACSDH*CRNTET
Trigger: AGTTTCTGTGTTCCTGCAGCAGTGGTCAGAACATGC...AAGGACTAAGAGACAAAAATCCTGGGTTCTTTCTCCATCACTTGCTCTGTAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR GCA 90 bp TTAATGATACAGAAAGAGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTTTATGGCTCCATACCTaGTGCTGGTCACTGTTTTCT +
Preference number: 2 (lower is better)
Translates to: LMIQKEYMVHLFSQPRSTLWLHT*CWSLFS
Trigger: AGAAAACAGTGACCAGCAGCAGGTATGGAGCCATAA...AGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACTCTTTCTGTATCATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR CCA 90 bp TTAATGATACAGAAAGAGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTCAGCTTCACTTTCTCTaGACTGTGGGTCTGTATAAG +
Preference number: 2 (lower is better)
Translates to: LMIQKEYMVHLFSQPRSTQLHFL*TVGLYK
Trigger: CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTG...AGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACTCTTTCTGTATCATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR TCA 90 bp TTAATGATACAGAAAGAGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTCAAGCAGTCCTAAGATaGCATCCATTTTCTCCTTTG +
Preference number: 2 (lower is better)
Translates to: LMIQKEYMVHLFSQPRSTQAVLR*HPFSPL
Trigger: CAAAGGAGAAAATGGATGTCATCTTAGGACTGCTTG...AGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACTCTTTCTGTATCATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR GCA 90 bp AGCTACAGAGCAAGTGATGGAGAAAGAACCCAGGATTTTTGTCTCTTAGTCCTTTTTGGATTAAAAATGTaGCTGGGCCCCTTTCCTCTC +
Preference number: 2 (lower is better)
Translates to: SYRASDGERTQDFCLLVLFGLKM*LGPFPL
Trigger: GAGAGGAAAGGGGCCCAGGCACATTTTTAATCCAAA...AAGGACTAAGAGACAAAAATCCTGGGTTCTTTCTCCATCACTTGCTCTGTAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR GCA 90 bp AACACATACTGCACTCCTTTGGGTCAGCTTGATAATAACCACCTCCCTGGAGAGTGTCTCTTAGTCCTTTaGAATAAGGTTACACTAGGT +
Preference number: 2 (lower is better)
Translates to: NTYCTPLGQLDNNHLPGECLLVL*NKVTLG
Trigger: ACCTAGTGTAACCTTATTGCAAAGGACTAAGAGACA...CTCTCCAGGGAGGTGGTTATTATCAAGCTGACCCAAAGGAGTGCAGTATGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR TCA 90 bp AAGGTTTACAAAATTAAGGCCAAACTGGAGCATTCTGATAGCAAGGGATTGTTTAGAAGAAGGGGTCTTTaGAGCCTTCCAGCCTTATGG +
Preference number: 2 (lower is better)
Translates to: KVYKIKAKLEHSDSKGLFRRRGL*SLPALW
Trigger: CCATAAGGCTGGAAGGCTTCAAAGACCCCTTCTTCT...AAACAATCCCTTGCTATCAGAATGCTCCAGTTTGGCCTTAATTTTGTAAACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR GCA 90 bp AGCTACAGAGCAAGTGATGGAGAAAGAACCCAGGATTTTTGTCTCTTAGTCCTTCAACTTCAGAACCACTaGAAACAAGCTTTGAGTCCT +
Preference number: 2 (lower is better)
Translates to: SYRASDGERTQDFCLLVLQLQNH*KQALSP
Trigger: AGGACTCAAAGCTTGTTTGCAGTGGTTCTGAAGTTG...AAGGACTAAGAGACAAAAATCCTGGGTTCTTTCTCCATCACTTGCTCTGTAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR GCA 90 bp AAGGTTTACAAAATTAAGGCCAAACTGGAGCATTCTGATAGCAAGGGATTGTTTTGGCTCCATACCTGCTaGTGGTCACTGTTTTCTGTG +
Preference number: 2 (lower is better)
Translates to: KVYKIKAKLEHSDSKGLFWLHTC*WSLFSV
Trigger: CACAGAAAACAGTGACCAGCAGCAGGTATGGAGCCA...AAACAATCCCTTGCTATCAGAATGCTCCAGTTTGGCCTTAATTTTGTAAACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR CCA 90 bp TTGGTGCTAACTCTGAGCCAGCTTCACTTTCTCTGGACTGTGGGTCTGTATAAGCAAAAGCAATTTGTTTaGAAACACAGGAATCCTTTG +
Preference number: 2 (lower is better)
Translates to: LVLTLSQLHFLWTVGLYKQKQFV*KHRNPL
Trigger: CAAAGGATTCCTGTGTTTCCAAACAAATTGCTTTTG...CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
3UTR-3UTR CCA 90 bp CATAAATACTTGTTGGCAGTTACTCACCAGGCCAAGTACGGGGTTTTGCACTCCACAAAGATTACAAGATaGACGAGTTTTGTGTGTTGT +
Preference number: 2 (lower is better)
Translates to: HKYLLAVTHQAKYGVLHSTKITR*TSFVCC
Trigger: ACAACACACAAAACTCGTCCATCTTGTAATCTTTGT...GGAGTGCAAAACCCCGTACTTGGCCTGGTGAGTAACTGCCAACAAGTATTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR CCA 90 bp AAGGTTTACAAAATTAAGGCCAAACTGGAGCATTCTGATAGCAAGGGATTGTTTCTTTGTGAACTGAGCTaGACTCTCTGTGAAGCTGGC +
Preference number: 2 (lower is better)
Translates to: KVYKIKAKLEHSDSKGLFLCELS*TLCEAG
Trigger: GCCAGCTTCACAGAGAGTCCAGCTCAGTTCACAAAG...AAACAATCCCTTGCTATCAGAATGCTCCAGTTTGGCCTTAATTTTGTAAACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR TCA 90 bp TTAATGATACAGAAAGAGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTACTGTTTTCTGTGGATaGGCTTCTGAGTTGAAATTT +
Preference number: 2 (lower is better)
Translates to: LMIQKEYMVHLFSQPRSTTVFCG*ASELKF
Trigger: AAATTTCAACTCAGAAGCTCATCCACAGAAAACAGT...AGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACTCTTTCTGTATCATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR GCA 90 bp AAGGTTTACAAAATTAAGGCCAAACTGGAGCATTCTGATAGCAAGGGATTGTTTGCACTCCCAACTCAGTaGAGGAAGATGCAAACAGAT +
Preference number: 2 (lower is better)
Translates to: KVYKIKAKLEHSDSKGLFALPTQ*RKMQTD
Trigger: ATCTGTTTGCATCTTCCTGCACTGAGTTGGGAGTGC...AAACAATCCCTTGCTATCAGAATGCTCCAGTTTGGCCTTAATTTTGTAAACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR GCA 90 bp TTAATGATACAGAAAGAGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTTGTCTCTTAGTCCTTTaGAATAAGGTTACACTAGGT +
Preference number: 2 (lower is better)
Translates to: LMIQKEYMVHLFSQPRSTCLLVL*NKVTLG
Trigger: ACCTAGTGTAACCTTATTGCAAAGGACTAAGAGACA...AGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACTCTTTCTGTATCATTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR CCA 90 bp CCACAAAACAACACTCAGACAACAAGCACTCTACAGCATCCACCACGGTCTATACAAAAGCAATTTGTTTaGAAACACAGGAATCCTTTG +
Preference number: 2 (lower is better)
Translates to: PQNNTQTTSTLQHPPRSIQKQFV*KHRNPL
Trigger: CAAAGGATTCCTGTGTTTCCAAACAAATTGCTTTTG...TATAGACCGTGGTGGATGCTGTAGAGTGCTTGTTGTCTGAGTGTTGTTTTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
3UTR-3UTR CCA 90 bp CCACAAAACAACACTCAGACAACAAGCACTCTACAGCATCCACCACGGTCTATAACTTTCTCTGGACTGTaGGTCTGTATAAGAATATAT +
Preference number: 2 (lower is better)
Translates to: PQNNTQTTSTLQHPPRSITFSGL*VCIRIY
Trigger: ATATATTCTTATACAGACCCACAGTCCAGAGAAAGT...TATAGACCGTGGTGGATGCTGTAGAGTGCTTGTTGTCTGAGTGTTGTTTTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
3UTR-3UTR CCA 90 bp AAGGTTTACAAAATTAAGGCCAAACTGGAGCATTCTGATAGCAAGGGATTGTTTTTTCCCCTACTTCTCTaGCTCCTGGAACCTGTTTCT +
Preference number: 2 (lower is better)
Translates to: KVYKIKAKLEHSDSKGLFFPLLL*LLEPVS
Trigger: AGAAACAGGTTCCAGGAGCCAGAGAAGTAGGGGAAA...AAACAATCCCTTGCTATCAGAATGCTCCAGTTTGGCCTTAATTTTGTAAACCTT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR TCA 90 bp AAGGTTTACAAAATTAAGGCCAAACTGGAGCATTCTGATAGCAAGGGATTGTTTGAATTCCTTCACTGGTaGAGAGCTGGAATCACAAAG +
Preference number: 2 (lower is better)
Translates to: KVYKIKAKLEHSDSKGLFEFLHW*RAGITK
Trigger: CTTTGTGATTCCAGCTCTTCACCAGTGAAGGAATTC...AAACAATCCCTTGCTATCAGAATGCTCCAGTTTGGCCTTAATTTTGTAAACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR GCA 90 bp GCCTATAAACAAAGACCTCACCATTCCTTAGTTAAACCTTTCAAAATCACACTAGCATGTTCTGACCACTaGTGCAGGAACACAGAAACT +
Preference number: 2 (lower is better)
Translates to: AYKQRPHHSLVKPFKITLACSDH*CRNTET
Trigger: AGTTTCTGTGTTCCTGCAGCAGTGGTCAGAACATGC...TAGTGTGATTTTGAAAGGTTTAACTAAGGAATGGTGAGGTCTTTGTTTATAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR CCA 90 bp CCACCCAGTCTAGGCACTCAGCTATATAAAAGTCTGTGCACAGTATACACACTTCAAAAGCAATTTGTTTaGAAACACAGGAATCCTTTG +
Preference number: 2 (lower is better)
Translates to: PPSLGTQLYKSLCTVYTLQKQFV*KHRNPL
Trigger: CAAAGGATTCCTGTGTTTCCAAACAAATTGCTTTTG...AAGTGTGTATACTGTGCACAGACTTTTATATAGCTGAGTGCCTAGACTGGGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR CCA 90 bp CCACCCAGTCTAGGCACTCAGCTATATAAAAGTCTGTGCACAGTATACACACTTACAAAGATTACAAGATaGACGAGTTTTGTGTGTTGT +
Preference number: 2 (lower is better)
Translates to: PPSLGTQLYKSLCTVYTLTKITR*TSFVCC
Trigger: ACAACACACAAAACTCGTCCATCTTGTAATCTTTGT...AAGTGTGTATACTGTGCACAGACTTTTATATAGCTGAGTGCCTAGACTGGGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR TCA 90 bp ACACAGAAACTCAGCAAAGTACAGACATGCAGGAAATCAGCACTATATAGGAAAGCTACAAAAGGAAAATaGTTTCATATCCCTGGTCCA +
Preference number: 2 (lower is better)
Translates to: TQKLSKVQTCRKSALYRKATKGK*FHIPGP
Trigger: TGGACCAGGGATATGAAATCATTTTCCTTTTGTAGC...TTTCCTATATAGTGCTGATTTCCTGCATGTCTGTACTTTGCTGAGTTTCTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
3UTR-3UTR TCA 90 bp AAGGTTTACAAAATTAAGGCCAAACTGGAGCATTCTGATAGCAAGGGATTGTTTTGTCATTGTTTCAAGTaGCACCAAACTGACACCAGA +
Preference number: 2 (lower is better)
Translates to: KVYKIKAKLEHSDSKGLFCHCFK*HQTDTR
Trigger: TCTGGTGTCAGTTTGGTGTCACTTGAAACAATGACA...AAACAATCCCTTGCTATCAGAATGCTCCAGTTTGGCCTTAATTTTGTAAACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR CCA 90 bp AGCTACAGAGCAAGTGATGGAGAAAGAACCCAGGATTTTTGTCTCTTAGTCCTTACTTTCTCTGGACTGTaGGTCTGTATAAGAATATAT +
Preference number: 2 (lower is better)
Translates to: SYRASDGERTQDFCLLVLTFSGL*VCIRIY
Trigger: ATATATTCTTATACAGACCCACAGTCCAGAGAAAGT...AAGGACTAAGAGACAAAAATCCTGGGTTCTTTCTCCATCACTTGCTCTGTAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR CCA 90 bp GCCTATAAACAAAGACCTCACCATTCCTTAGTTAAACCTTTCAAAATCACACTACAGCTTCACTTTCTCTaGACTGTGGGTCTGTATAAG +
Preference number: 2 (lower is better)
Translates to: AYKQRPHHSLVKPFKITLQLHFL*TVGLYK
Trigger: CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTG...TAGTGTGATTTTGAAAGGTTTAACTAAGGAATGGTGAGGTCTTTGTTTATAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR TCA 90 bp AAGGTTTACAAAATTAAGGCCAAACTGGAGCATTCTGATAGCAAGGGATTGTTTCTCTGGTATAGAAACTaGGCAGTAAGCTATATGAGA +
Preference number: 2 (lower is better)
Translates to: KVYKIKAKLEHSDSKGLFLWYRN*AVSYMR
Trigger: TCTCATATAGCTTACTGCTCAGTTTCTATACCAGAG...AAACAATCCCTTGCTATCAGAATGCTCCAGTTTGGCCTTAATTTTGTAAACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR GCA 90 bp AAGGTTTACAAAATTAAGGCCAAACTGGAGCATTCTGATAGCAAGGGATTGTTTGCAAGCTTATCTACCTaGTTACTAAATTGCAGTTGG +
Preference number: 2 (lower is better)
Translates to: KVYKIKAKLEHSDSKGLFASLST*LLNCSW
Trigger: CCAACTGCAATTTAGTAAGCAGGTAGATAAGCTTGC...AAACAATCCCTTGCTATCAGAATGCTCCAGTTTGGCCTTAATTTTGTAAACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR CCA 90 bp AAGGTTTACAAAATTAAGGCCAAACTGGAGCATTCTGATAGCAAGGGATTGTTTCACACCTTCAACAATTaGAGTAAAGGCAGACTCTTA +
Preference number: 2 (lower is better)
Translates to: KVYKIKAKLEHSDSKGLFHTFNN*SKGRLL
Trigger: TAAGAGTCTGCCTTTACTCCAATTGTTGAAGGTGTG...AAACAATCCCTTGCTATCAGAATGCTCCAGTTTGGCCTTAATTTTGTAAACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR TCA 90 bp GCCTATAAACAAAGACCTCACCATTCCTTAGTTAAACCTTTCAAAATCACACTAGCTACAAAAGGAAAATaGTTTCATATCCCTGGTCCA +
Preference number: 2 (lower is better)
Translates to: AYKQRPHHSLVKPFKITLATKGK*FHIPGP
Trigger: TGGACCAGGGATATGAAATCATTTTCCTTTTGTAGC...TAGTGTGATTTTGAAAGGTTTAACTAAGGAATGGTGAGGTCTTTGTTTATAGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR CCA 90 bp GCCTATAAACAAAGACCTCACCATTCCTTAGTTAAACCTTTCAAAATCACACTACACACCTTCAACAATTaGAGTAAAGGCAGACTCTTA +
Preference number: 2 (lower is better)
Translates to: AYKQRPHHSLVKPFKITLHTFNN*SKGRLL
Trigger: TAAGAGTCTGCCTTTACTCCAATTGTTGAAGGTGTG...TAGTGTGATTTTGAAAGGTTTAACTAAGGAATGGTGAGGTCTTTGTTTATAGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR CCA 90 bp AAGGTTTACAAAATTAAGGCCAAACTGGAGCATTCTGATAGCAAGGGATTGTTTTACACGCCAGCAAAATaGAATAATAAAACCAAGGAG +
Preference number: 2 (lower is better)
Translates to: KVYKIKAKLEHSDSKGLFYTPAK*NNKTKE
Trigger: CTCCTTGGTTTTATTATTCCATTTTGCTGGCGTGTA...AAACAATCCCTTGCTATCAGAATGCTCCAGTTTGGCCTTAATTTTGTAAACCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR CAA 90 bp CTCTCCCTTGTTCATCCTCCTGACTCTCCATACATATATACAGATTaGCCTCACAGTAGAGAAATAGAATTCTTATATTTCCTATTTGTA +
Preference number: 2 (lower is better)
Translates to: LSLVHPPDSPYIYTD*PHSREIEFLYFLFV
Trigger: TACAAATAGGAAATATAAGAATTCTATTTCTCTACTGTGAGGCAAATCTGTATATATGTATGGAGAGTCAGGAGGATGAACAAGGGAGAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR GCA 90 bp GCCTATAAACAAAGACCTCACCATTCCTTAGTTAAACCTTTCAAAATCACACTAAGCAAAGTACAGACATaGAGGAAATCAGCACTATAT +
Preference number: 2 (lower is better)
Translates to: AYKQRPHHSLVKPFKITLSKVQT*RKSALY
Trigger: ATATAGTGCTGATTTCCTGCATGTCTGTACTTTGCT...TAGTGTGATTTTGAAAGGTTTAACTAAGGAATGGTGAGGTCTTTGTTTATAGGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR CCA 90 bp AAGGTTTACAAAATTAAGGCCAAACTGGAGCATTCTGATAGCAAGGGATTGTTTACAAAGATTACAAGATaGACGAGTTTTGTGTGTTGT +
Preference number: 2 (lower is better)
Translates to: KVYKIKAKLEHSDSKGLFTKITR*TSFVCC
Trigger: ACAACACACAAAACTCGTCCATCTTGTAATCTTTGT...AAACAATCCCTTGCTATCAGAATGCTCCAGTTTGGCCTTAATTTTGTAAACCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR CCA 72 bp GGCCTGTGCTTCTCAGGCCTCCCCAGCCACTGCAAGTaGGTGTTCCGCTGTGTGCCCCTACCCAGCCACTAC +
Preference number: 3 (lower is better)
Translates to: GLCFSGLPSHCK*VFRCVPLPSHY
Trigger: GTAGTGGCTGGGTAGGGGCACACAGCGGAACACCCACTTGCAGTGGCTGGGGAGGCCTGAGAAGCACAGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR GCA 72 bp GCCTCCCCAGCCACTGCAAGTGGGTGTTCCGCTGTGTaGCCCTACCCAGCCACTACTGCTAAAGAACACAGT +
Preference number: 3 (lower is better)
Translates to: ASPATASGCSAV*PYPATTAKEHS
Trigger: ACTGTGTTCTTTAGCAGTAGTGGCTGGGTAGGGGCACACAGCGGAACACCCACTTGCAGTGGCTGGGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR CAA 90 bp CAACCCTCTTTGCTCACTGGCTCCCACTATAACAGCCTCTTCTCCACCCACCCACACAGTCCAACCCTATaGCCCCAGGGGCAAACCAGG +
Preference number: 3 (lower is better)
Translates to: QPSLLTGSHYNSLFSTHPHSPTL*PQGQTR
Trigger: CCTGGTTTGCCCCTGGGGCAATAGGGTTGGACTGTG...TGGGTGGGTGGAGAAGAGGCTGTTATAGTGGGAGCCAGTGAGCAAAGAGGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR CAA 90 bp AAAAGCACAGGGAACTGTGCTGAGGCCCCTGGTGCCTGGGAGGATAATCCCTTCCCCCTTTCCTCTCCCTaGTTCATCCTCCTGACTCTC +
Preference number: 3 (lower is better)
Translates to: KSTGNCAEAPGAWEDNPFPLSSP*FILLTL
Trigger: GAGAGTCAGGAGGATGAACAAGGGAGAGGAAAGGGG...GAAGGGATTATCCTCCCAGGCACCAGGGGCCTCAGCACAGTTCCCTGTGCTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR GCA 72 bp ACACAGGAGCAAGGGAAAGCCCCTCACAGGAAGCCATaGTCTGACACCTTTGACAAGAGGGCCAATGCCCAG +
Preference number: 3 (lower is better)
Translates to: TQEQGKAPHRKP*SDTFDKRANAQ
Trigger: CTGGGCATTGGCCCTCTTGTCAAAGGTGTCAGAGCATGGCTTCCTGTGAGGGGCTTTCCCTTGCTCCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR CAA 90 bp AGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTCCTCTCCAAGGTTTACCACAGTCCAACCCTATaGCCCCAGGGGCAAACCAGG +
Preference number: 3 (lower is better)
Translates to: STWYISSHSRAPLLSKVYHSPTL*PQGQTR
Trigger: CCTGGTTTGCCCCTGGGGCAATAGGGTTGGACTGTG...GTAAACCTTGGAGAGGAGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR GCA 72 bp CCATCATCAAAAGAGACACCCATTGCCGGCAATGGGTaGCGGACAGAACCACAAGCTGGAGGAAGACACAGC +
Preference number: 3 (lower is better)
Translates to: PSSKETPIAGNG*RTEPQAGGRHS
Trigger: GCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
3UTR CCA 72 bp AGGGCCATCATCAAAAGAGACACCCATTGCCGGCAATaGGTGCCGGACAGAACCACAAGCTGGAGGAAGACA +
Preference number: 3 (lower is better)
Translates to: RAIIKRDTHCRQ*VPDRTTSWRKT
Trigger: TGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
3UTR GCA 72 bp GAGAACCAAAATATGCTGAAACAAACCCATCAGCACTaGCAGGACGGAGGTAGGGGACCCTGTGGCACTCAA +
Preference number: 3 (lower is better)
Translates to: ENQNMLKQTHQH*QDGGRGPCGTQ
Trigger: TTGAGTGCCACAGGGTCCCCTACCTCCGTCCTGGCAGTGCTGATGGGTTTGTTTCAGCATATTTTGGTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR CCA 72 bp TGCAATTTCGAGACGATCTTGCTTAGGGATTGCCTGTaGACATGGTCCTCCTCACTCACAAAGTGCCACCCC +
Preference number: 3 (lower is better)
Translates to: CNFETILLRDCL*TWSSSLTKCHP
Trigger: GGGGTGGCACTTTGTGAGTGAGGAGGACCATGTCCACAGGCAATCCCTAAGCAAGATCGTCTCGAAATTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR CAA 90 bp CAACCCTCTTTGCTCACTGGCTCCCACTATAACAGCCTCTTCTCCACCCACCCAAAACACAGGAATCCTTaGCTGAAGGGCCATCATCAA +
Preference number: 3 (lower is better)
Translates to: QPSLLTGSHYNSLFSTHPKHRNP*LKGHHQ
Trigger: TTGATGATGGCCCTTCAGCAAAGGATTCCTGTGTTT...TGGGTGGGTGGAGAAGAGGCTGTTATAGTGGGAGCCAGTGAGCAAAGAGGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR TCA 72 bp ACTGCCGTGGATAACAGTAACAGAAGAAGGGGTCTTTaGAGCCTTCCAGCCTTATGGCTCCATACCTGCTGC +
Preference number: 3 (lower is better)
Translates to: TAVDNSNRRRGL*SLPALWLHTCC
Trigger: GCAGCAGGTATGGAGCCATAAGGCTGGAAGGCTTCAAAGACCCCTTCTTCTGTTACTGTTATCCACGGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR GCA 72 bp CCAGGCCAAGTACGGGGTTTTGCACTCCCAACTCAGTaGAGGAAGATGCAAACAGATGCAAGCTTATCTACC +
Preference number: 3 (lower is better)
Translates to: PGQVRGFALPTQ*RKMQTDASLST
Trigger: GGTAGATAAGCTTGCATCTGTTTGCATCTTCCTGCACTGAGTTGGGAGTGCAAAACCCCGTACTTGGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR CAA 90 bp AAAAGCACAGGGAACTGTGCTGAGGCCCCTGGTGCCTGGGAGGATAATCCCTTCCATCCATTTTCTCCTTaGAAACCATCACTGACATTG +
Preference number: 3 (lower is better)
Translates to: KSTGNCAEAPGAWEDNPFHPFSP*KPSLTL
Trigger: CAATGTCAGTGATGGTTTCAAAGGAGAAAATGGATG...GAAGGGATTATCCTCCCAGGCACCAGGGGCCTCAGCACAGTTCCCTGTGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR CAA 90 bp AGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTCCTCTCCAAGGTTTACACCCATAAATACTTGTaGGCAGTTACTCACCAGGCC +
Preference number: 3 (lower is better)
Translates to: STWYISSHSRAPLLSKVYTHKYL*AVTHQA
Trigger: GGCCTGGTGAGTAACTGCCAACAAGTATTTATGGGT...GTAAACCTTGGAGAGGAGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR CAA 90 bp AAAAGCACAGGGAACTGTGCTGAGGCCCCTGGTGCCTGGGAGGATAATCCCTTCAAGAACCCAGGATTTTaGTCTCTTAGTCCTTTGCAA +
Preference number: 3 (lower is better)
Translates to: KSTGNCAEAPGAWEDNPFKNPGF*SLSPLQ
Trigger: TTGCAAAGGACTAAGAGACAAAAATCCTGGGTTCTT...GAAGGGATTATCCTCCCAGGCACCAGGGGCCTCAGCACAGTTCCCTGTGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR TCA 72 bp TGCCTGGGCCCCTTTCCTCTCCCTTGTTCATCCTCCTaGCTCTCCATACATATATACAGATTTGCCTCACAG +
Preference number: 3 (lower is better)
Translates to: CLGPFPLPCSSS*LSIHIYRFASQ
Trigger: CTGTGAGGCAAATCTGTATATATGTATGGAGAGTCAGGAGGATGAACAAGGGAGAGGAAAGGGGCCCAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR TCA 72 bp GCTAAGAAGCACCAACGGATGCTCTGGTATAGAAACTaGGCAGTAAGCTATATGAGAGCAGGCCCCAGGTCT +
Preference number: 3 (lower is better)
Translates to: AKKHQRMLWYRN*AVSYMRAGPRS
Trigger: AGACCTGGGGCCTGCTCTCATATAGCTTACTGCTCAGTTTCTATACCAGAGCATCCGTTGGTGCTTCTTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR CCA 72 bp TGTCCCAGGATGATGAAGACAAGGCTAGCCTATAGCTaGAGGACTTTACTGCTATCTACTCATGGCCTCTCC +
Preference number: 3 (lower is better)
Translates to: CPRMMKTRLAYS*RTLLLSTHGLS
Trigger: GGAGAGGCCATGAGTAGATAGCAGTAAAGTCCTCCAGCTATAGGCTAGCCTTGTCTTCATCATCCTGGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR CAA 90 bp AGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTCCTCTCCAAGGTTTACACTGTTAAGCCAGGCTaGCCTATAAACAAAGACCTC +
Preference number: 3 (lower is better)
Translates to: STWYISSHSRAPLLSKVYTVKPG*PINKDL
Trigger: GAGGTCTTTGTTTATAGGCAAGCCTGGCTTAACAGT...GTAAACCTTGGAGAGGAGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR GCA 72 bp TGCAGGAAGATGCAAACAGATGCAAGCTTATCTACCTaGTTACTAAATTGCAGTTGGGAGGGCTGCTGCTCC +
Preference number: 3 (lower is better)
Translates to: CRKMQTDASLST*LLNCSWEGCCS
Trigger: GGAGCAGCAGCCCTCCCAACTGCAATTTAGTAAGCAGGTAGATAAGCTTGCATCTGTTTGCATCTTCCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR GCA 72 bp TCCCACTATAACAGCCTCTTCTCCACCCACCCAGGCTaGACTATGGAACTAAAGAATTCCTTCACTGGTGAA +
Preference number: 3 (lower is better)
Translates to: SHYNSLFSTHPG*TMELKNSFTGE
Trigger: TTCACCAGTGAAGGAATTCTTTAGTTCCATAGTGCAGCCTGGGTGGGTGGAGAAGAGGCTGTTATAGTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR CAA 90 bp CATAAATACTTGTTGGCAGTTACTCACCAGGCCAAGTACGGGGTTTTGCACTCCAAACACAGGAATCCTTaGCTGAAGGGCCATCATCAA +
Preference number: 3 (lower is better)
Translates to: HKYLLAVTHQAKYGVLHSKHRNP*LKGHHQ
Trigger: TTGATGATGGCCCTTCAGCAAAGGATTCCTGTGTTT...GGAGTGCAAAACCCCGTACTTGGCCTGGTGAGTAACTGCCAACAAGTATTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR CAA 90 bp CATAAATACTTGTTGGCAGTTACTCACCAGGCCAAGTACGGGGTTTTGCACTCCACTGTTAAGCCAGGCTaGCCTATAAACAAAGACCTC +
Preference number: 3 (lower is better)
Translates to: HKYLLAVTHQAKYGVLHSTVKPG*PINKDL
Trigger: GAGGTCTTTGTTTATAGGCAAGCCTGGCTTAACAGT...GGAGTGCAAAACCCCGTACTTGGCCTGGTGAGTAACTGCCAACAAGTATTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR TCA 72 bp ACCACATGGTGGCTCACAACCATCTGTAATAAGATCTaGTGCCCTCTTCTGGTGTGTCTGAAGACAGCTACA +
Preference number: 3 (lower is better)
Translates to: TTWWLTTICNKI*CPLLVCLKTAT
Trigger: TGTAGCTGTCTTCAGACACACCAGAAGAGGGCATCAGATCTTATTACAGATGGTTGTGAGCCACCATGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
3UTR TCA 72 bp GCTCCATACCTGCTGCTGGTCACTGTTTTCTGTGGATaGGCTTCTGAGTTGAAATTTCCTACCTCCAGCAAA +
Preference number: 3 (lower is better)
Translates to: APYLLLVTVFCG*ASELKFPTSSK
Trigger: TTTGCTGGAGGTAGGAAATTTCAACTCAGAAGCTCATCCACAGAAAACAGTGACCAGCAGCAGGTATGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR CAA 90 bp CCACAAAACAACACTCAGACAACAAGCACTCTACAGCATCCACCACGGTCTATATTTTTCAGGGAAATGTaGGTGCTAACTCTGAGCCAG +
Preference number: 3 (lower is better)
Translates to: PQNNTQTTSTLQHPPRSIFFREM*VLTLSQ
Trigger: CTGGCTCAGAGTTAGCACCAACATTTCCCTGAAAAA...TATAGACCGTGGTGGATGCTGTAGAGTGCTTGTTGTCTGAGTGTTGTTTTGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
3UTR TCA 72 bp AGGCTGCACTATGGAACTAAAGAATTCCTTCACTGGTaGAGAGCTGGAATCACAAAGACCAAGGAAAGCCAC +
Preference number: 3 (lower is better)
Translates to: RLHYGTKEFLHW*RAGITKTKESH
Trigger: GTGGCTTTCCTTGGTCTTTGTGATTCCAGCTCTTCACCAGTGAAGGAATTCTTTAGTTCCATAGTGCAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR GCA 72 bp ACTCTGAGGATAAAATGCATAGCAACCACCCACAGCTaGACTACACAGATATCTCGCTCTGTTTCTCAATGC +
Preference number: 3 (lower is better)
Translates to: TLRIKCIATTHS*TTQISRSVSQC
Trigger: GCATTGAGAAACAGAGCGAGATATCTGTGTAGTGCAGCTGTGGGTGGTTGCTATGCATTTTATCCTCAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR CCA 72 bp ACCTCCAGCAAAAACTCAGATGTATCAGGCATGGCCTaGAACCCTAACAATTTGTACCGCTTATCCAACTAC +
Preference number: 3 (lower is better)
Translates to: TSSKNSDVSGMA*NPNNLYRLSNY
Trigger: GTAGTTGGATAAGCGGTACAAATTGTTAGGGTTCCAGGCCATGCCTGATACATCTGAGTTTTTGCTGGAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR CCA 72 bp TTCCTACCTCCAGCAAAAACTCAGATGTATCAGGCATaGCCTGGAACCCTAACAATTTGTACCGCTTATCCA +
Preference number: 3 (lower is better)
Translates to: FLPPAKTQMYQA*PGTLTICTAYP
Trigger: TGGATAAGCGGTACAAATTGTTAGGGTTCCAGGCCATGCCTGATACATCTGAGTTTTTGCTGGAGGTAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR CAA 90 bp CCACCCAGTCTAGGCACTCAGCTATATAAAAGTCTGTGCACAGTATACACACTTAAACACAGGAATCCTTaGCTGAAGGGCCATCATCAA +
Preference number: 3 (lower is better)
Translates to: PPSLGTQLYKSLCTVYTLKHRNP*LKGHHQ
Trigger: TTGATGATGGCCCTTCAGCAAAGGATTCCTGTGTTT...AAGTGTGTATACTGTGCACAGACTTTTATATAGCTGAGTGCCTAGACTGGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR TCA 72 bp CTGACGTGGTTGTCATTGTTTCAAGTGACACCAAACTaGCACCAGAGAGTACAAGGGTCTTCAGTCAAACAA +
Preference number: 3 (lower is better)
Translates to: LTWLSLFQVTPN*HQRVQGSSVKQ
Trigger: TTGTTTGACTGAAGACCCTTGTACTCTCTGGTGTCAGTTTGGTGTCACTTGAAACAATGACAACCACGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
3UTR TCA 72 bp CCACCACGGTCTATACACACACAAGCAGTCCTAAGATaGCATCCATTTTCTCCTTTGAAACCATCACTGACA +
Preference number: 3 (lower is better)
Translates to: PPRSIHTQAVLR*HPFSPLKPSLT
Trigger: TGTCAGTGATGGTTTCAAAGGAGAAAATGGATGTCATCTTAGGACTGCTTGTGTGTGTATAGACCGTGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
3UTR TCA 72 bp AAATTGCAGTTGGGAGGGCTGCTGCTCCTAGATTTATaGAAATGCCACATTCAGTCAACCAGAGAATGGACA +
Preference number: 3 (lower is better)
Translates to: KLQLGGLLLLDL*KCHIQSTREWT
Trigger: TGTCCATTCTCTGGTTGACTGAATGTGGCATTTTCATAAATCTAGGAGCAGCAGCCCTCCCAACTGCAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR GCA 72 bp TGCACTCCCAACTCAGTGCAGGAAGATGCAAACAGATaGAAGCTTATCTACCTGCTTACTAAATTGCAGTTG +
Preference number: 3 (lower is better)
Translates to: CTPNSVQEDANR*KLIYLLTKLQL
Trigger: CAACTGCAATTTAGTAAGCAGGTAGATAAGCTTGCATCTGTTTGCATCTTCCTGCACTGAGTTGGGAGTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR TCA 72 bp GAAATCGAGGTGGTGTTCATTCAGCTACAGAGCAAGTaGTGGAGAAAGAACCCAGGATTTTTGTCTCTTAGT +
Preference number: 3 (lower is better)
Translates to: EIEVVFIQLQSK*WRKNPGFLSLS
Trigger: ACTAAGAGACAAAAATCCTGGGTTCTTTCTCCATCACTTGCTCTGTAGCTGAATGAACACCACCTCGATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR CCA 72 bp AGACAGAACAAGACACTGAAACTCAAGAAATCGAGGTaGTGTTCATTCAGCTACAGAGCAAGTGATGGAGAA +
Preference number: 3 (lower is better)
Translates to: RQNKTLKLKKSR*CSFSYRASDGE
Trigger: TTCTCCATCACTTGCTCTGTAGCTGAATGAACACCACCTCGATTTCTTGAGTTTCAGTGTCTTGTTCTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR CAA 90 bp AGCTACAGAGCAAGTGATGGAGAAAGAACCCAGGATTTTTGTCTCTTAGTCCTTATGACCCATAAATACTaGTTGGCAGTTACTCACCAG +
Preference number: 3 (lower is better)
Translates to: SYRASDGERTQDFCLLVLMTHKY*LAVTHQ
Trigger: CTGGTGAGTAACTGCCAACAAGTATTTATGGGTCAT...AAGGACTAAGAGACAAAAATCCTGGGTTCTTTCTCCATCACTTGCTCTGTAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR TCA 72 bp TGCTGGTCACTGTTTTCTGTGGATGAGCTTCTGAGTTaGAATTTCCTACCTCCAGCAAAAACTCAGATGTAT +
Preference number: 3 (lower is better)
Translates to: CWSLFSVDELLS*NFLPPAKTQMY
Trigger: ATACATCTGAGTTTTTGCTGGAGGTAGGAAATTTCAACTCAGAAGCTCATCCACAGAAAACAGTGACCAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR-3UTR CAA 90 bp ACACAGAAACTCAGCAAAGTACAGACATGCAGGAAATCAGCACTATATAGGAAAAAACACAGGAATCCTTaGCTGAAGGGCCATCATCAA +
Preference number: 3 (lower is better)
Translates to: TQKLSKVQTCRKSALYRKKHRNP*LKGHHQ
Trigger: TTGATGATGGCCCTTCAGCAAAGGATTCCTGTGTTT...TTTCCTATATAGTGCTGATTTCCTGCATGTCTGTACTTTGCTGAGTTTCTGTGT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
3UTR-3UTR CAA 90 bp AGCTACAGAGCAAGTGATGGAGAAAGAACCCAGGATTTTTGTCTCTTAGTCCTTCATCCATTTTCTCCTTaGAAACCATCACTGACATTG +
Preference number: 3 (lower is better)
Translates to: SYRASDGERTQDFCLLVLHPFSP*KPSLTL
Trigger: CAATGTCAGTGATGGTTTCAAAGGAGAAAATGGATG...AAGGACTAAGAGACAAAAATCCTGGGTTCTTTCTCCATCACTTGCTCTGTAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR TCA 72 bp ACTAACAGACTCATTAAATACATACTTATTACAGGGTaGCTGAATTCTGGTCAGTGTGCAAGCTCAGACTCA +
Preference number: 3 (lower is better)
Translates to: TNRLIKYILITG*LNSGQCASSDS
Trigger: TGAGTCTGAGCTTGCACACTGACCAGAATTCAGTCACCCTGTAATAAGTATGTATTTAATGAGTCTGTTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR TCA 90 bp AAAAGCACAGGGAACTGTGCTGAGGCCCCTGGTGCCTGGGAGGATAATCCCTTCCAGCTAGCACGTCACTaGGCCCTGGTGGCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: KSTGNCAEAPGAWEDNPFQLARH*ALVAGQ
Trigger: TTGGCCAGCCACCAGGGCTCAGTGACGTGCTAGCTG...GAAGGGATTATCCTCCCAGGCACCAGGGGCCTCAGCACAGTTCCCTGTGCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp CCGGCAATGGGTGCCGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGGTACTTTCACAGGACTaGCCACGTCTACCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: PAMGAGQNHKLEEDTALRVLSQD*PRLPGG
Trigger: GCCTCCAGGTAGACGTGGGCAGTCCTGTGAAAGTAC...CCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp CCGGCAATGGGTGCCGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGAGAGATGGGCAAGGGTaGACTCTCCTGGACAGGTGT +
Preference number: 4 (lower is better)
Translates to: PAMGAGQNHKLEEDTALRRDGQG*TLLDRC
Trigger: ACACCTGTCCAGGAGAGTCCACCCTTGCCCATCTCT...CCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp AAGGGCCATCATCAAAAGAGACACCCATTGCCGGCAATGGGTGCCGGACAGAACCAAGTCCTCCACAGATaGGGCACTGCCTGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: KGHHQKRHPLPAMGAGQNQVLHR*GTAWEC
Trigger: ACACTCCCAGGCAGTGCCGCATCTGTGGAGGACTTG...GTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp AAGGGCCATCATCAAAAGAGACACCCATTGCCGGCAATGGGTGCCGGACAGAACTCTTCTGACAGGGGATaGAGCCGTGTCTCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: KGHHQKRHPLPAMGAGQNSSDRG*SRVSSP
Trigger: GGGACTGGAGACACGGCTGCATCCCCTGTCAGAAGA...GTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp CCGGCAATGGGTGCCGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGCATCGCAAAGAAGTCTaGGCGCACAGCCTTGAATCC +
Preference number: 4 (lower is better)
Translates to: PAMGAGQNHKLEEDTALRHRKEV*AHSLES
Trigger: GGATTCAAGGCTGTGCGCGCAGACTTCTTTGCGATG...CCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp AAAAGCACAGGGAACTGTGCTGAGGCCCCTGGTGCCTGGGAGGATAATCCCTTCAAGGGTGGACTCTCCTaGACAGGTGTGCTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: KSTGNCAEAPGAWEDNPFKGGLS*TGVLFS
Trigger: GCTGAACAGCACACCTGTCCAGGAGAGTCCACCCTT...GAAGGGATTATCCTCCCAGGCACCAGGGGCCTCAGCACAGTTCCCTGTGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp AAAAGCACAGGGAACTGTGCTGAGGCCCCTGGTGCCTGGGAGGATAATCCCTTCAGAGATGGGCAAGGGTaGACTCTCCTGGACAGGTGT +
Preference number: 4 (lower is better)
Translates to: KSTGNCAEAPGAWEDNPFRDGQG*TLLDRC
Trigger: ACACCTGTCCAGGAGAGTCCACCCTTGCCCATCTCT...GAAGGGATTATCCTCCCAGGCACCAGGGGCCTCAGCACAGTTCCCTGTGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp AAGGGCCATCATCAAAAGAGACACCCATTGCCGGCAATGGGTGCCGGACAGAACGTACTCTCCCACTTCTaGGCAGGGCGTCACTTGTGG +
Preference number: 4 (lower is better)
Translates to: KGHHQKRHPLPAMGAGQNVLSHF*AGRHLW
Trigger: CCACAAGTGACGCCCTGCCCAGAAGTGGGAGAGTAC...GTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp AAAAGCACAGGGAACTGTGCTGAGGCCCCTGGTGCCTGGGAGGATAATCCCTTCTGTGGAAGGAACTCTTaGATGCCCCACAGAACGGTC +
Preference number: 4 (lower is better)
Translates to: KSTGNCAEAPGAWEDNPFCGRNS*MPHRTV
Trigger: GACCGTTCTGTGGGGCATTCAAGAGTTCCTTCCACA...GAAGGGATTATCCTCCCAGGCACCAGGGGCCTCAGCACAGTTCCCTGTGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR TCA 90 bp CCGGCAATGGGTGCCGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGCCATCCGTGAAACCTTaGCCACGACCTTCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: PAMGAGQNHKLEEDTALRPSVKP*PRPSSN
Trigger: ATTGGAAGAAGGTCGTGGTCAAGGTTTCACGGATGG...CCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp CCGGCAATGGGTGCCGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGGCATCTTTGTCAGGCTaGAGGGTAAGGAGTGGAATC +
Preference number: 4 (lower is better)
Translates to: PAMGAGQNHKLEEDTALRASLSG*RVRSGI
Trigger: GATTCCACTCCTTACCCTTCAGCCTGACAAAGATGC...CCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp CCGGCAATGGGTGCCGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGCTTGATCTTCCCAGCTaGGATGTCCGGATCGTCATA +
Preference number: 4 (lower is better)
Translates to: PAMGAGQNHKLEEDTALRLDLPS*DVRIVI
Trigger: TATGACGATCCGGACATCTCAGCTGGGAAGATCAAG...CCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp CCGGCAATGGGTGCCGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGGAAGGAACTCTTGAATaGCCCACAGAACGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: PAMGAGQNHKLEEDTALREGTLE*PTERSW
Trigger: CCAAGACCGTTCTGTGGGGCATTCAAGAGTTCCTTC...CCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp AAGGGCCATCATCAAAAGAGACACCCATTGCCGGCAATGGGTGCCGGACAGAACGTACTTTCACAGGACTaGCCACGTCTACCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: KGHHQKRHPLPAMGAGQNVLSQD*PRLPGG
Trigger: GCCTCCAGGTAGACGTGGGCAGTCCTGTGAAAGTAC...GTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACCAAGTCCTCCACAGATaGGGCACTGCCTGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHQVLHR*GTAWEC
Trigger: ACACTCCCAGGCAGTGCCGCATCTGTGGAGGACTTG...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp CCGGCAATGGGTGCCGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGGGTGAACCTGAGTGCTaGAGGTCTTACAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: PAMGAGQNHKLEEDTALRGEPEC*RSYRTA
Trigger: AGCAGTTCTGTAAGACCTGCAGCACTCAGGTTCACC...CCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTCTTCTGACAGGGGATaGAGCCGTGTCTCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHSSDRG*SRVSSP
Trigger: GGGACTGGAGACACGGCTGCATCCCCTGTCAGAAGA...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp CAACCCTCTTTGCTCACTGGCTCCCACTATAACAGCCTCTTCTCCACCCACCCACTGCCCACGTCTACCTaGAGGCCTTTACTTAGTCGG +
Preference number: 4 (lower is better)
Translates to: QPSLLTGSHYNSLFSTHPLPTST*RPLLSR
Trigger: CCGACTAAGTAAAGGCCTCCAGGTAGACGTGGGCAG...TGGGTGGGTGGAGAAGAGGCTGTTATAGTGGGAGCCAGTGAGCAAAGAGGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR CAA 72 bp CCTTTGCTGAAGGGCCATCATCAAAAGAGACACCCATaGCCGGCAATGGGTGCCGGACAGAACCACAAGCTG +
Preference number: 4 (lower is better)
Translates to: PLLKGHHQKRHP*PAMGAGQNHKL
Trigger: CAGCTTGTGGTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCTTCAGCAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp CCGGCAATGGGTGCCGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGGTCACCTACACCTCTTaGCATAAAGGCAAGTTTGGG +
Preference number: 4 (lower is better)
Translates to: PAMGAGQNHKLEEDTALRVTYTS*HKGKFG
Trigger: CCCAAACTTGCCTTTATGTCAAGAGGTGTAGGTGAC...CCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp CCGGCAATGGGTGCCGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTCTACTTCCAGGGTCTaGGGTAGATCCTGTAACCTT +
Preference number: 4 (lower is better)
Translates to: PAMGAGQNHKLEEDTALRSTSRV*GRSCNL
Trigger: AAGGTTACAGGATCTACCTCAGACCCTGGAAGTAGA...CCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp CCGGCAATGGGTGCCGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGAGAGAGAGTGGACTATaGGCCATGCTGCCATTAGTA +
Preference number: 4 (lower is better)
Translates to: PAMGAGQNHKLEEDTALRRESGL*AMLPLV
Trigger: TACTAATGGCAGCATGGCTCATAGTCCACTCTCTCT...CCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp TTGGTGCTAACTCTGAGCCAGCTTCACTTTCTCTGGACTGTGGGTCTGTATAAGCAGCTAGCACGTCACTaGGCCCTGGTGGCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: LVLTLSQLHFLWTVGLYKQLARH*ALVAGQ
Trigger: TTGGCCAGCCACCAGGGCTCAGTGACGTGCTAGCTG...CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp AACACATACTGCACTCCTTTGGGTCAGCTTGATAATAACCACCTCCCTGGAGAGCAGCTAGCACGTCACTaGGCCCTGGTGGCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: NTYCTPLGQLDNNHLPGEQLARH*ALVAGQ
Trigger: TTGGCCAGCCACCAGGGCTCAGTGACGTGCTAGCTG...CTCTCCAGGGAGGTGGTTATTATCAAGCTGACCCAAAGGAGTGCAGTATGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACGGGGGAGGTTCAACCTaGATTGTATCTCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHGGGST*IVSPGP
Trigger: AGGCCCAGGAGATACAATGCAGGTTGAACCTCCCCC...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTCTCCTGGACAGGTGTaGTGTTCAGCTCCCCCATCA +
Preference number: 4 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHSPGQV*CSAPPS
Trigger: TGATGGGGGAGCTGAACAGCACACCTGTCCAGGAGA...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp CCGGCAATGGGTGCCGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTCCATCTGTACAGCCTaGGCATTCATCTTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: PAMGAGQNHKLEEDTALRSICTA*AFIFQF
Trigger: GAACTGGAAGATGAATGCGCAGGCTGTACAGATGGA...CCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp CCGGCAATGGGTGCCGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGCAGTTTCACAAACAGTaGCTTCTTCAGGGCACACGT +
Preference number: 4 (lower is better)
Translates to: PAMGAGQNHKLEEDTALRQFHKQ*LLQGTR
Trigger: ACGTGTGCCCTGAAGAAGGCACTGTTTGTGAAACTG...CCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp AGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTCCTCTCCAAGGTTTACCAAGTCCTCCACAGATaGGGCACTGCCTGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: STWYISSHSRAPLLSKVYQVLHR*GTAWEC
Trigger: ACACTCCCAGGCAGTGCCGCATCTGTGGAGGACTTG...GTAAACCTTGGAGAGGAGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp CAACCCTCTTTGCTCACTGGCTCCCACTATAACAGCCTCTTCTCCACCCACCCACGTCATAGCACTCCCTaGACTCGTACATCGCAAGTC +
Preference number: 4 (lower is better)
Translates to: QPSLLTGSHYNSLFSTHPRHSTP*TRTSQV
Trigger: GACTTGCGATGTACGAGTGCAGGGAGTGCTATGACG...TGGGTGGGTGGAGAAGAGGCTGTTATAGTGGGAGCCAGTGAGCAAAGAGGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp CCGGCAATGGGTGCCGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGCAGGTCTTACAGAACTaGTTGATCTTCCCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: PAMGAGQNHKLEEDTALRQVLQN*LIFPAE
Trigger: CTCAGCTGGGAAGATCAAGCAGTTCTGTAAGACCTG...CCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp AAAAGCACAGGGAACTGTGCTGAGGCCCCTGGTGCCTGGGAGGATAATCCCTTCGGTGAACCTGAGTGCTaGAGGTCTTACAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: KSTGNCAEAPGAWEDNPFGEPEC*RSYRTA
Trigger: AGCAGTTCTGTAAGACCTGCAGCACTCAGGTTCACC...GAAGGGATTATCCTCCCAGGCACCAGGGGCCTCAGCACAGTTCCCTGTGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp AACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTTCTTCTGACAGGGGATaGAGCCGTGTCTCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: NHKLEEDTALRFVLSLPTSSDRG*SRVSSP
Trigger: GGGACTGGAGACACGGCTGCATCCCCTGTCAGAAGA...AGTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp AAGGGCCATCATCAAAAGAGACACCCATTGCCGGCAATGGGTGCCGGACAGAACCATCGCAAAGAAGTCTaGGCGCACAGCCTTGAATCC +
Preference number: 4 (lower is better)
Translates to: KGHHQKRHPLPAMGAGQNHRKEV*AHSLES
Trigger: GGATTCAAGGCTGTGCGCGCAGACTTCTTTGCGATG...GTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp CCGGCAATGGGTGCCGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGCCCACAGAACGGTCTTaGATGTACTGTCCTATACTC +
Preference number: 4 (lower is better)
Translates to: PAMGAGQNHKLEEDTALRPTERS*MYCPIL
Trigger: GAGTATAGGACAGTACATCCAAGACCGTTCTGTGGG...CCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACCTGCCCACGTCTACCTaGAGGCCTTTACTTAGTCGG +
Preference number: 4 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHLPTST*RPLLSR
Trigger: CCGACTAAGTAAAGGCCTCCAGGTAGACGTGGGCAG...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACAAGGGTGGACTCTCCTaGACAGGTGTGCTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHKGGLS*TGVLFS
Trigger: GCTGAACAGCACACCTGTCCAGGAGAGTCCACCCTT...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACAGAGATGGGCAAGGGTaGACTCTCCTGGACAGGTGT +
Preference number: 4 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHRDGQG*TLLDRC
Trigger: ACACCTGTCCAGGAGAGTCCACCCTTGCCCATCTCT...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp AACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTCTGAGCCCTGGTGGCTaGCCAATCCAACGGATAACC +
Preference number: 4 (lower is better)
Translates to: NHKLEEDTALRFVLSLPTLSPGG*PIQRIT
Trigger: GGTTATCCGTTGGATTGGCCAGCCACCAGGGCTCAG...AGTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp AAGGTTACACTAGGTTGTCTCCCAAAGTGGTCCCCAGACATGCCTGTCACCCATGTACTCTCCCACTTCTaGGCAGGGCGTCACTTGTGG +
Preference number: 4 (lower is better)
Translates to: KVTLGCLPKWSPDMPVTHVLSHF*AGRHLW
Trigger: CCACAAGTGACGCCCTGCCCAGAAGTGGGAGAGTAC...ATGGGTGACAGGCATGTCTGGGGACCACTTTGGGAGACAACCTAGTGTAACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp AACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTGTACTCTCCCACTTCTaGGCAGGGCGTCACTTGTGG +
Preference number: 4 (lower is better)
Translates to: NHKLEEDTALRFVLSLPTVLSHF*AGRHLW
Trigger: CCACAAGTGACGCCCTGCCCAGAAGTGGGAGAGTAC...AGTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp CCGGCAATGGGTGCCGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGGTACAGGCTCATGGTTaGACTCTGGTACATGCACAT +
Preference number: 4 (lower is better)
Translates to: PAMGAGQNHKLEEDTALRVQAHG*TLVHAH
Trigger: ATGTGCATGTACCAGAGTCCAACCATGAGCCTGTAC...CCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTGTGGAAGGAACTCTTaGATGCCCCACAGAACGGTC +
Preference number: 4 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHCGRNS*MPHRTV
Trigger: GACCGTTCTGTGGGGCATTCAAGAGTTCCTTCCACA...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp AAGGGCCATCATCAAAAGAGACACCCATTGCCGGCAATGGGTGCCGGACAGAACCCATCCGTGAAACCTTaGCCACGACCTTCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: KGHHQKRHPLPAMGAGQNPSVKP*PRPSSN
Trigger: ATTGGAAGAAGGTCGTGGTCAAGGTTTCACGGATGG...GTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp AAGGGCCATCATCAAAAGAGACACCCATTGCCGGCAATGGGTGCCGGACAGAACGATATACCCCATCCGTaGAACCTTGACCACGACCTT +
Preference number: 4 (lower is better)
Translates to: KGHHQKRHPLPAMGAGQNDIPHP*NLDHDL
Trigger: AAGGTCGTGGTCAAGGTTTCACGGATGGGGTATATC...GTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp AAAAGCACAGGGAACTGTGCTGAGGCCCCTGGTGCCTGGGAGGATAATCCCTTCGTCACCTACACCTCTTaGCATAAAGGCAAGTTTGGG +
Preference number: 4 (lower is better)
Translates to: KSTGNCAEAPGAWEDNPFVTYTS*HKGKFG
Trigger: CCCAAACTTGCCTTTATGTCAAGAGGTGTAGGTGAC...GAAGGGATTATCCTCCCAGGCACCAGGGGCCTCAGCACAGTTCCCTGTGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR TCA 90 bp AAAAGCACAGGGAACTGTGCTGAGGCCCCTGGTGCCTGGGAGGATAATCCCTTCAGAGAGAGTGGACTATaGGCCATGCTGCCATTAGTA +
Preference number: 4 (lower is better)
Translates to: KSTGNCAEAPGAWEDNPFRESGL*AMLPLV
Trigger: TACTAATGGCAGCATGGCTCATAGTCCACTCTCTCT...GAAGGGATTATCCTCCCAGGCACCAGGGGCCTCAGCACAGTTCCCTGTGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR TCA 90 bp CCACAAAACAACACTCAGACAACAAGCACTCTACAGCATCCACCACGGTCTATACAGCTAGCACGTCACTaGGCCCTGGTGGCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: PQNNTQTTSTLQHPPRSIQLARH*ALVAGQ
Trigger: TTGGCCAGCCACCAGGGCTCAGTGACGTGCTAGCTG...TATAGACCGTGGTGGATGCTGTAGAGTGCTTGTTGTCTGAGTGTTGTTTTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp AGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTCCTCTCCAAGGTTTACGTACTTTCACAGGACTaGCCACGTCTACCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: STWYISSHSRAPLLSKVYVLSQD*PRLPGG
Trigger: GCCTCCAGGTAGACGTGGGCAGTCCTGTGAAAGTAC...GTAAACCTTGGAGAGGAGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp AAGGTTACACTAGGTTGTCTCCCAAAGTGGTCCCCAGACATGCCTGTCACCCATGTACTTTCACAGGACTaGCCACGTCTACCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: KVTLGCLPKWSPDMPVTHVLSQD*PRLPGG
Trigger: GCCTCCAGGTAGACGTGGGCAGTCCTGTGAAAGTAC...ATGGGTGACAGGCATGTCTGGGGACCACTTTGGGAGACAACCTAGTGTAACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp AACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTGTACTTTCACAGGACTaGCCACGTCTACCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: NHKLEEDTALRFVLSLPTVLSQD*PRLPGG
Trigger: GCCTCCAGGTAGACGTGGGCAGTCCTGTGAAAGTAC...AGTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp CCGGCAATGGGTGCCGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTGTATCTCCTGGGCCTaGAAAATCACTTTCCAATCC +
Preference number: 4 (lower is better)
Translates to: PAMGAGQNHKLEEDTALRCISWA*KITFQS
Trigger: GGATTGGAAAGTGATTTTGCAGGCCCAGGAGATACA...CCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp AAGGTTACACTAGGTTGTCTCCCAAAGTGGTCCCCAGACATGCCTGTCACCCATGGGGGAGGTTCAACCTaGATTGTATCTCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: KVTLGCLPKWSPDMPVTHGGGST*IVSPGP
Trigger: AGGCCCAGGAGATACAATGCAGGTTGAACCTCCCCC...ATGGGTGACAGGCATGTCTGGGGACCACTTTGGGAGACAACCTAGTGTAACCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp CGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGGGGGAGGTTCAACCTaGATTGTATCTCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: RTEPQAGGRHSTKVCAVSGGGST*IVSPGP
Trigger: AGGCCCAGGAGATACAATGCAGGTTGAACCTCCCCC...AGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp AGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTCCTCTCCAAGGTTTACTCTCCTGGACAGGTGTaGTGTTCAGCTCCCCCATCA +
Preference number: 4 (lower is better)
Translates to: STWYISSHSRAPLLSKVYSPGQV*CSAPPS
Trigger: TGATGGGGGAGCTGAACAGCACACCTGTCCAGGAGA...GTAAACCTTGGAGAGGAGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp CGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTTCTCCTGGACAGGTGTaGTGTTCAGCTCCCCCATCA +
Preference number: 4 (lower is better)
Translates to: RTEPQAGGRHSTKVCAVSSPGQV*CSAPPS
Trigger: TGATGGGGGAGCTGAACAGCACACCTGTCCAGGAGA...AGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp AAAAGCACAGGGAACTGTGCTGAGGCCCCTGGTGCCTGGGAGGATAATCCCTTCTCCATCTGTACAGCCTaGGCATTCATCTTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: KSTGNCAEAPGAWEDNPFSICTA*AFIFQF
Trigger: GAACTGGAAGATGAATGCGCAGGCTGTACAGATGGA...GAAGGGATTATCCTCCCAGGCACCAGGGGCCTCAGCACAGTTCCCTGTGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp CAACCCTCTTTGCTCACTGGCTCCCACTATAACAGCCTCTTCTCCACCCACCCAAACAGGCTGCAAGGATaGAAACCTAGAGTCCGGTCT +
Preference number: 4 (lower is better)
Translates to: QPSLLTGSHYNSLFSTHPNRLQG*KPRVRS
Trigger: AGACCGGACTCTAGGTTTGCATCCTTGCAGCCTGTT...TGGGTGGGTGGAGAAGAGGCTGTTATAGTGGGAGCCAGTGAGCAAAGAGGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp AAGGGCCATCATCAAAAGAGACACCCATTGCCGGCAATGGGTGCCGGACAGAACAACAGGCTGCAAGGATaGAAACCTAGAGTCCGGTCT +
Preference number: 4 (lower is better)
Translates to: KGHHQKRHPLPAMGAGQNNRLQG*KPRVRS
Trigger: AGACCGGACTCTAGGTTTGCATCCTTGCAGCCTGTT...GTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp AAGGGCCATCATCAAAAGAGACACCCATTGCCGGCAATGGGTGCCGGACAGAACGGTGAACCTGAGTGCTaGAGGTCTTACAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: KGHHQKRHPLPAMGAGQNGEPEC*RSYRTA
Trigger: AGCAGTTCTGTAAGACCTGCAGCACTCAGGTTCACC...GTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp CAACCCTCTTTGCTCACTGGCTCCCACTATAACAGCCTCTTCTCCACCCACCCACTGGAATCCAAAGAGTaGAGGTCCTCCAGAGACATC +
Preference number: 4 (lower is better)
Translates to: QPSLLTGSHYNSLFSTHPLESKE*RSSRDI
Trigger: GATGTCTCTGGAGGACCTGCACTCTTTGGATTCCAG...TGGGTGGGTGGAGAAGAGGCTGTTATAGTGGGAGCCAGTGAGCAAAGAGGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACCATCGCAAAGAAGTCTaGGCGCACAGCCTTGAATCC +
Preference number: 4 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHHRKEV*AHSLES
Trigger: GGATTCAAGGCTGTGCGCGCAGACTTCTTTGCGATG...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp CCGGCAATGGGTGCCGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGGTACATGCACATGTATaGATCGCAAAGAAGTCTGCG +
Preference number: 4 (lower is better)
Translates to: PAMGAGQNHKLEEDTALRVHAHV*IAKKSA
Trigger: CGCAGACTTCTTTGCGATGCATACATGTGCATGTAC...CCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp AAGGTTACACTAGGTTGTCTCCCAAAGTGGTCCCCAGACATGCCTGTCACCCATCTGCCCACGTCTACCTaGAGGCCTTTACTTAGTCGG +
Preference number: 4 (lower is better)
Translates to: KVTLGCLPKWSPDMPVTHLPTST*RPLLSR
Trigger: CCGACTAAGTAAAGGCCTCCAGGTAGACGTGGGCAG...ATGGGTGACAGGCATGTCTGGGGACCACTTTGGGAGACAACCTAGTGTAACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp CCGGCAATGGGTGCCGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGCTGCATTGTATCTCCTaGGCCTGCAAAATCACTTTC +
Preference number: 4 (lower is better)
Translates to: PAMGAGQNHKLEEDTALRLHCIS*ACKITF
Trigger: GAAAGTGATTTTGCAGGCCCAGGAGATACAATGCAG...CCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp AACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTAAGGGTGGACTCTCCTaGACAGGTGTGCTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: NHKLEEDTALRFVLSLPTKGGLS*TGVLFS
Trigger: GCTGAACAGCACACCTGTCCAGGAGAGTCCACCCTT...AGTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp CGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTAGAGATGGGCAAGGGTaGACTCTCCTGGACAGGTGT +
Preference number: 4 (lower is better)
Translates to: RTEPQAGGRHSTKVCAVSRDGQG*TLLDRC
Trigger: ACACCTGTCCAGGAGAGTCCACCCTTGCCCATCTCT...AGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACCATTCCCAGAAGAGATaGGCAAGGGTGGACTCTCCT +
Preference number: 4 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHHSQKR*ARVDSP
Trigger: AGGAGAGTCCACCCTTGCCCATCTCTTCTGGGAATG...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp CCGGCAATGGGTGCCGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGAATGATTCAACCTCCTaGGATGAAGGTGAACCTGAG +
Preference number: 4 (lower is better)
Translates to: PAMGAGQNHKLEEDTALRNDSTS*DEGEPE
Trigger: CTCAGGTTCACCTTCATCCCAGGAGGTTGAATCATT...CCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp CCGGCAATGGGTGCCGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGCTCATGGTTGGACTCTaGTACATGCACATGTATGCA +
Preference number: 4 (lower is better)
Translates to: PAMGAGQNHKLEEDTALRLMVGL*YMHMYA
Trigger: TGCATACATGTGCATGTACCAGAGTCCAACCATGAG...CCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp CCGGCAATGGGTGCCGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGATTTGTACAGGCTCATaGTTGGACTCTGGTACATGC +
Preference number: 4 (lower is better)
Translates to: PAMGAGQNHKLEEDTALRICTGS*LDSGTC
Trigger: GCATGTACCAGAGTCCAACCATGAGCCTGTACAAAT...CCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp CCGGCAATGGGTGCCGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGCTGTGTCACGCTATCTaGGATGATGTCATTGATGTG +
Preference number: 4 (lower is better)
Translates to: PAMGAGQNHKLEEDTALRLCHAI*DDVIDV
Trigger: CACATCAATGACATCATCCCAGATAGCGTGACACAG...CCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp CGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTTGTGGAAGGAACTCTTaGATGCCCCACAGAACGGTC +
Preference number: 4 (lower is better)
Translates to: RTEPQAGGRHSTKVCAVSCGRNS*MPHRTV
Trigger: GACCGTTCTGTGGGGCATTCAAGAGTTCCTTCCACA...AGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp AAAAGCACAGGGAACTGTGCTGAGGCCCCTGGTGCCTGGGAGGATAATCCCTTCCTAATAAAGGTCCTCTaGAGCGTACAACTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: KSTGNCAEAPGAWEDNPFLIKVL*SVQLLE
Trigger: TTCCAGGAGTTGTACGCTTCAGAGGACCTTTATTAG...GAAGGGATTATCCTCCCAGGCACCAGGGGCCTCAGCACAGTTCCCTGTGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR TCA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACCCATCCGTGAAACCTTaGCCACGACCTTCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHPSVKP*PRPSSN
Trigger: ATTGGAAGAAGGTCGTGGTCAAGGTTTCACGGATGG...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp AAGGGCCATCATCAAAAGAGACACCCATTGCCGGCAATGGGTGCCGGACAGAACTCTACTTCCAGGGTCTaGGGTAGATCCTGTAACCTT +
Preference number: 4 (lower is better)
Translates to: KGHHQKRHPLPAMGAGQNSTSRV*GRSCNL
Trigger: AAGGTTACAGGATCTACCTCAGACCCTGGAAGTAGA...GTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp CCGGCAATGGGTGCCGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTCAGAGGTAAAACCTaGTGCAGCCTCAACTTTTTC +
Preference number: 4 (lower is better)
Translates to: PAMGAGQNHKLEEDTALRFRGKT*CSLNFF
Trigger: GAAAAAGTTGAGGCTGCATCAGGTTTTACCTCTGAA...CCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp CCGGCAATGGGTGCCGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGCTGGATAATCAAGCATaGTGGTGCCTCTGCAAATTT +
Preference number: 4 (lower is better)
Translates to: PAMGAGQNHKLEEDTALRLDNQA*WCLCKF
Trigger: AAATTTGCAGAGGCACCATCATGCTTGATTATCCAG...CCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp AAAAGCACAGGGAACTGTGCTGAGGCCCCTGGTGCCTGGGAGGATAATCCCTTCTCTTACAGAACTGCTTaGTCTTCCCAGCTGAGATGT +
Preference number: 4 (lower is better)
Translates to: KSTGNCAEAPGAWEDNPFSYRTA*SSQLRC
Trigger: ACATCTCAGCTGGGAAGATCAAGCAGTTCTGTAAGA...GAAGGGATTATCCTCCCAGGCACCAGGGGCCTCAGCACAGTTCCCTGTGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp CAACCCTCTTTGCTCACTGGCTCCCACTATAACAGCCTCTTCTCCACCCACCCACAGTTTCACAAACAGTaGCTTCTTCAGGGCACACGT +
Preference number: 4 (lower is better)
Translates to: QPSLLTGSHYNSLFSTHPQFHKQ*LLQGTR
Trigger: ACGTGTGCCCTGAAGAAGGCACTGTTTGTGAAACTG...TGGGTGGGTGGAGAAGAGGCTGTTATAGTGGGAGCCAGTGAGCAAAGAGGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp AAGGGCCATCATCAAAAGAGACACCCATTGCCGGCAATGGGTGCCGGACAGAACCAGTTTCACAAACAGTaGCTTCTTCAGGGCACACGT +
Preference number: 4 (lower is better)
Translates to: KGHHQKRHPLPAMGAGQNQFHKQ*LLQGTR
Trigger: ACGTGTGCCCTGAAGAAGGCACTGTTTGTGAAACTG...GTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACAACAGGCTGCAAGGATaGAAACCTAGAGTCCGGTCT +
Preference number: 4 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHNRLQG*KPRVRS
Trigger: AGACCGGACTCTAGGTTTGCATCCTTGCAGCCTGTT...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp CGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTCGTCATAGCACTCCCTaGACTCGTACATCGCAAGTC +
Preference number: 4 (lower is better)
Translates to: RTEPQAGGRHSTKVCAVSRHSTP*TRTSQV
Trigger: GACTTGCGATGTACGAGTGCAGGGAGTGCTATGACG...AGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp TTGGTGCTAACTCTGAGCCAGCTTCACTTTCTCTGGACTGTGGGTCTGTATAAGTCTTCTGACAGGGGATaGAGCCGTGTCTCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: LVLTLSQLHFLWTVGLYKSSDRG*SRVSSP
Trigger: GGGACTGGAGACACGGCTGCATCCCCTGTCAGAAGA...CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACCTGGAATCCAAAGAGTaGAGGTCCTCCAGAGACATC +
Preference number: 4 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHLESKE*RSSRDI
Trigger: GATGTCTCTGGAGGACCTGCACTCTTTGGATTCCAG...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp AAGGGCCATCATCAAAAGAGACACCCATTGCCGGCAATGGGTGCCGGACAGAACGAAGTAACTTTCTCTTaGCTCCACAGGCCTGAACTC +
Preference number: 4 (lower is better)
Translates to: KGHHQKRHPLPAMGAGQNEVTFS*LHRPEL
Trigger: GAGTTCAGGCCTGTGGAGCCAAGAGAAAGTTACTTC...GTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp AAGGGCCATCATCAAAAGAGACACCCATTGCCGGCAATGGGTGCCGGACAGAACCCCACAGAACGGTCTTaGATGTACTGTCCTATACTC +
Preference number: 4 (lower is better)
Translates to: KGHHQKRHPLPAMGAGQNPTERS*MYCPIL
Trigger: GAGTATAGGACAGTACATCCAAGACCGTTCTGTGGG...GTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp AAGGTTACACTAGGTTGTCTCCCAAAGTGGTCCCCAGACATGCCTGTCACCCATCATTCCCAGAAGAGATaGGCAAGGGTGGACTCTCCT +
Preference number: 4 (lower is better)
Translates to: KVTLGCLPKWSPDMPVTHHSQKR*ARVDSP
Trigger: AGGAGAGTCCACCCTTGCCCATCTCTTCTGGGAATG...ATGGGTGACAGGCATGTCTGGGGACCACTTTGGGAGACAACCTAGTGTAACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp AACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTCATTCCCAGAAGAGATaGGCAAGGGTGGACTCTCCT +
Preference number: 4 (lower is better)
Translates to: NHKLEEDTALRFVLSLPTHSQKR*ARVDSP
Trigger: AGGAGAGTCCACCCTTGCCCATCTCTTCTGGGAATG...AGTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp TTGGTGCTAACTCTGAGCCAGCTTCACTTTCTCTGGACTGTGGGTCTGTATAAGCTGAGCCCTGGTGGCTaGCCAATCCAACGGATAACC +
Preference number: 4 (lower is better)
Translates to: LVLTLSQLHFLWTVGLYKLSPGG*PIQRIT
Trigger: GGTTATCCGTTGGATTGGCCAGCCACCAGGGCTCAG...CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp CAACCCTCTTTGCTCACTGGCTCCCACTATAACAGCCTCTTCTCCACCCACCCAAGATGCGGCACTGCCTaGGAGTGTCTTCAAGTAAAT +
Preference number: 4 (lower is better)
Translates to: QPSLLTGSHYNSLFSTHPRCGTA*ECLQVN
Trigger: ATTTACTTGAAGACACTCCCAGGCAGTGCCGCATCT...TGGGTGGGTGGAGAAGAGGCTGTTATAGTGGGAGCCAGTGAGCAAAGAGGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp CCGGCAATGGGTGCCGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGAGTCAGGCAAGTCTTTaGGAAGTGATACTGGATGAT +
Preference number: 4 (lower is better)
Translates to: PAMGAGQNHKLEEDTALRSQASL*EVILDD
Trigger: ATCATCCAGTATCACTTCCCAAAGACTTGCCTGACT...CCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp AACACATACTGCACTCCTTTGGGTCAGCTTGATAATAACCACCTCCCTGGAGAGGTACTCTCCCACTTCTaGGCAGGGCGTCACTTGTGG +
Preference number: 4 (lower is better)
Translates to: NTYCTPLGQLDNNHLPGEVLSHF*AGRHLW
Trigger: CCACAAGTGACGCCCTGCCCAGAAGTGGGAGAGTAC...CTCTCCAGGGAGGTGGTTATTATCAAGCTGACCCAAAGGAGTGCAGTATGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp AAGGGCCATCATCAAAAGAGACACCCATTGCCGGCAATGGGTGCCGGACAGAACGTACAGGCTCATGGTTaGACTCTGGTACATGCACAT +
Preference number: 4 (lower is better)
Translates to: KGHHQKRHPLPAMGAGQNVQAHG*TLVHAH
Trigger: ATGTGCATGTACCAGAGTCCAACCATGAGCCTGTAC...GTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp AAGGGCCATCATCAAAAGAGACACCCATTGCCGGCAATGGGTGCCGGACAGAACCTAATAAAGGTCCTCTaGAGCGTACAACTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: KGHHQKRHPLPAMGAGQNLIKVL*SVQLLE
Trigger: TTCCAGGAGTTGTACGCTTCAGAGGACCTTTATTAG...GTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp AACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTCCATCCGTGAAACCTTaGCCACGACCTTCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: NHKLEEDTALRFVLSLPTPSVKP*PRPSSN
Trigger: ATTGGAAGAAGGTCGTGGTCAAGGTTTCACGGATGG...AGTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp CGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGATATACCCCATCCGTaGAACCTTGACCACGACCTT +
Preference number: 4 (lower is better)
Translates to: RTEPQAGGRHSTKVCAVSDIPHP*NLDHDL
Trigger: AAGGTCGTGGTCAAGGTTTCACGGATGGGGTATATC...AGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACAGACATCTCTGTAAGTaGCTTTGCAGGGTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHRHLCK*LCRVFC
Trigger: GCAGAAGACCCTGCAAAGTCACTTACAGAGATGTCT...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACAGAGAGAGTGGACTATaGGCCATGCTGCCATTAGTA +
Preference number: 4 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHRESGL*AMLPLV
Trigger: TACTAATGGCAGCATGGCTCATAGTCCACTCTCTCT...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp AAGGTTACACTAGGTTGTCTCCCAAAGTGGTCCCCAGACATGCCTGTCACCCATCTTGATCTTCCCAGCTaGGATGTCCGGATCGTCATA +
Preference number: 4 (lower is better)
Translates to: KVTLGCLPKWSPDMPVTHLDLPS*DVRIVI
Trigger: TATGACGATCCGGACATCTCAGCTGGGAAGATCAAG...ATGGGTGACAGGCATGTCTGGGGACCACTTTGGGAGACAACCTAGTGTAACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR TCA 90 bp CGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTCTTGATCTTCCCAGCTaGGATGTCCGGATCGTCATA +
Preference number: 4 (lower is better)
Translates to: RTEPQAGGRHSTKVCAVSLDLPS*DVRIVI
Trigger: TATGACGATCCGGACATCTCAGCTGGGAAGATCAAG...AGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp CAACCCTCTTTGCTCACTGGCTCCCACTATAACAGCCTCTTCTCCACCCACCCATCTTACAGAACTGCTTaGTCTTCCCAGCTGAGATGT +
Preference number: 4 (lower is better)
Translates to: QPSLLTGSHYNSLFSTHPSYRTA*SSQLRC
Trigger: ACATCTCAGCTGGGAAGATCAAGCAGTTCTGTAAGA...TGGGTGGGTGGAGAAGAGGCTGTTATAGTGGGAGCCAGTGAGCAAAGAGGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR TCA 90 bp CGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTAATAACTCCATCTTCTaGCAGGGGATGCAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: RTEPQAGGRHSTKVCAVSNNSIF*QGMQPC
Trigger: ACACGGCTGCATCCCCTGTCAGAAGATGGAGTTATT...AGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp CGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGAAGGAACTCTTGAATaGCCCACAGAACGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: RTEPQAGGRHSTKVCAVSEGTLE*PTERSW
Trigger: CCAAGACCGTTCTGTGGGGCATTCAAGAGTTCCTTC...AGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp TTGGTGCTAACTCTGAGCCAGCTTCACTTTCTCTGGACTGTGGGTCTGTATAAGGTACTTTCACAGGACTaGCCACGTCTACCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: LVLTLSQLHFLWTVGLYKVLSQD*PRLPGG
Trigger: GCCTCCAGGTAGACGTGGGCAGTCCTGTGAAAGTAC...CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp CATAAATACTTGTTGGCAGTTACTCACCAGGCCAAGTACGGGGTTTTGCACTCCTCTCCTGGACAGGTGTaGTGTTCAGCTCCCCCATCA +
Preference number: 4 (lower is better)
Translates to: HKYLLAVTHQAKYGVLHSSPGQV*CSAPPS
Trigger: TGATGGGGGAGCTGAACAGCACACCTGTCCAGGAGA...GGAGTGCAAAACCCCGTACTTGGCCTGGTGAGTAACTGCCAACAAGTATTTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp TTGGTGCTAACTCTGAGCCAGCTTCACTTTCTCTGGACTGTGGGTCTGTATAAGTCTCCTGGACAGGTGTaGTGTTCAGCTCCCCCATCA +
Preference number: 4 (lower is better)
Translates to: LVLTLSQLHFLWTVGLYKSPGQV*CSAPPS
Trigger: TGATGGGGGAGCTGAACAGCACACCTGTCCAGGAGA...CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp CGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTAACAGGCTGCAAGGATaGAAACCTAGAGTCCGGTCT +
Preference number: 4 (lower is better)
Translates to: RTEPQAGGRHSTKVCAVSNRLQG*KPRVRS
Trigger: AGACCGGACTCTAGGTTTGCATCCTTGCAGCCTGTT...AGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp CCACAAAACAACACTCAGACAACAAGCACTCTACAGCATCCACCACGGTCTATACAAGTCCTCCACAGATaGGGCACTGCCTGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: PQNNTQTTSTLQHPPRSIQVLHR*GTAWEC
Trigger: ACACTCCCAGGCAGTGCCGCATCTGTGGAGGACTTG...TATAGACCGTGGTGGATGCTGTAGAGTGCTTGTTGTCTGAGTGTTGTTTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACCAGGTCTTACAGAACTaGTTGATCTTCCCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHQVLQN*LIFPAE
Trigger: CTCAGCTGGGAAGATCAAGCAGTTCTGTAAGACCTG...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp CGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGGTGAACCTGAGTGCTaGAGGTCTTACAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: RTEPQAGGRHSTKVCAVSGEPEC*RSYRTA
Trigger: AGCAGTTCTGTAAGACCTGCAGCACTCAGGTTCACC...AGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp CCACAAAACAACACTCAGACAACAAGCACTCTACAGCATCCACCACGGTCTATATCTTCTGACAGGGGATaGAGCCGTGTCTCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: PQNNTQTTSTLQHPPRSISSDRG*SRVSSP
Trigger: GGGACTGGAGACACGGCTGCATCCCCTGTCAGAAGA...TATAGACCGTGGTGGATGCTGTAGAGTGCTTGTTGTCTGAGTGTTGTTTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp AACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTCTGGAATCCAAAGAGTaGAGGTCCTCCAGAGACATC +
Preference number: 4 (lower is better)
Translates to: NHKLEEDTALRFVLSLPTLESKE*RSSRDI
Trigger: GATGTCTCTGGAGGACCTGCACTCTTTGGATTCCAG...AGTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp CGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTCTGGAATCCAAAGAGTaGAGGTCCTCCAGAGACATC +
Preference number: 4 (lower is better)
Translates to: RTEPQAGGRHSTKVCAVSLESKE*RSSRDI
Trigger: GATGTCTCTGGAGGACCTGCACTCTTTGGATTCCAG...AGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACGAAGTAACTTTCTCTTaGCTCCACAGGCCTGAACTC +
Preference number: 4 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHEVTFS*LHRPEL
Trigger: GAGTTCAGGCCTGTGGAGCCAAGAGAAAGTTACTTC...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACCCCACAGAACGGTCTTaGATGTACTGTCCTATACTC +
Preference number: 4 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHPTERS*MYCPIL
Trigger: GAGTATAGGACAGTACATCCAAGACCGTTCTGTGGG...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp TTGGTGCTAACTCTGAGCCAGCTTCACTTTCTCTGGACTGTGGGTCTGTATAAGCTGCCCACGTCTACCTaGAGGCCTTTACTTAGTCGG +
Preference number: 4 (lower is better)
Translates to: LVLTLSQLHFLWTVGLYKLPTST*RPLLSR
Trigger: CCGACTAAGTAAAGGCCTCCAGGTAGACGTGGGCAG...CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp AAGGGCCATCATCAAAAGAGACACCCATTGCCGGCAATGGGTGCCGGACAGAACCTGCATTGTATCTCCTaGGCCTGCAAAATCACTTTC +
Preference number: 4 (lower is better)
Translates to: KGHHQKRHPLPAMGAGQNLHCIS*ACKITF
Trigger: GAAAGTGATTTTGCAGGCCCAGGAGATACAATGCAG...GTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp CCGGCAATGGGTGCCGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGCCTTCAAAGAAACTCTaGAGTTTATTTCCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: PAMGAGQNHKLEEDTALRPSKKL*SLFPKG
Trigger: CCCCTTTGGAAATAAACTCCAGAGTTTCTTTGAAGG...CCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp CCGGCAATGGGTGCCGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGACCTTTCAATTTGATTaGAAACAGGCTGCAAGGATG +
Preference number: 4 (lower is better)
Translates to: PAMGAGQNHKLEEDTALRTFQFD*KQAARM
Trigger: CATCCTTGCAGCCTGTTTCCAATCAAATTGAAAGGT...CCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp CAACCCTCTTTGCTCACTGGCTCCCACTATAACAGCCTCTTCTCCACCCACCCAAATGATTCAACCTCCTaGGATGAAGGTGAACCTGAG +
Preference number: 4 (lower is better)
Translates to: QPSLLTGSHYNSLFSTHPNDSTS*DEGEPE
Trigger: CTCAGGTTCACCTTCATCCCAGGAGGTTGAATCATT...TGGGTGGGTGGAGAAGAGGCTGTTATAGTGGGAGCCAGTGAGCAAAGAGGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp CGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCAGGGCGTCACTTGTaGAATGTTGAAGCCATTCTG +
Preference number: 4 (lower is better)
Translates to: RTEPQAGGRHSTKVCAVSAGRHL*NVEAIL
Trigger: CAGAATGGCTTCAACATTCCACAAGTGACGCCCTGC...AGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp AACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTGCAGGGCGTCACTTGTaGAATGTTGAAGCCATTCTG +
Preference number: 4 (lower is better)
Translates to: NHKLEEDTALRFVLSLPTAGRHL*NVEAIL
Trigger: CAGAATGGCTTCAACATTCCACAAGTGACGCCCTGC...AGTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp AAGGGCCATCATCAAAAGAGACACCCATTGCCGGCAATGGGTGCCGGACAGAACCTCATGGTTGGACTCTaGTACATGCACATGTATGCA +
Preference number: 4 (lower is better)
Translates to: KGHHQKRHPLPAMGAGQNLMVGL*YMHMYA
Trigger: TGCATACATGTGCATGTACCAGAGTCCAACCATGAG...GTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACGTACAGGCTCATGGTTaGACTCTGGTACATGCACAT +
Preference number: 4 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHVQAHG*TLVHAH
Trigger: ATGTGCATGTACCAGAGTCCAACCATGAGCCTGTAC...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp AAGGGCCATCATCAAAAGAGACACCCATTGCCGGCAATGGGTGCCGGACAGAACATTTGTACAGGCTCATaGTTGGACTCTGGTACATGC +
Preference number: 4 (lower is better)
Translates to: KGHHQKRHPLPAMGAGQNICTGS*LDSGTC
Trigger: GCATGTACCAGAGTCCAACCATGAGCCTGTACAAAT...GTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp AAGGGCCATCATCAAAAGAGACACCCATTGCCGGCAATGGGTGCCGGACAGAACCTGTGTCACGCTATCTaGGATGATGTCATTGATGTG +
Preference number: 4 (lower is better)
Translates to: KGHHQKRHPLPAMGAGQNLCHAI*DDVIDV
Trigger: CACATCAATGACATCATCCCAGATAGCGTGACACAG...GTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp CATAAATACTTGTTGGCAGTTACTCACCAGGCCAAGTACGGGGTTTTGCACTCCTGTGGAAGGAACTCTTaGATGCCCCACAGAACGGTC +
Preference number: 4 (lower is better)
Translates to: HKYLLAVTHQAKYGVLHSCGRNS*MPHRTV
Trigger: GACCGTTCTGTGGGGCATTCAAGAGTTCCTTCCACA...GGAGTGCAAAACCCCGTACTTGGCCTGGTGAGTAACTGCCAACAAGTATTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR TCA 90 bp TTGGTGCTAACTCTGAGCCAGCTTCACTTTCTCTGGACTGTGGGTCTGTATAAGTGTGGAAGGAACTCTTaGATGCCCCACAGAACGGTC +
Preference number: 4 (lower is better)
Translates to: LVLTLSQLHFLWTVGLYKCGRNS*MPHRTV
Trigger: GACCGTTCTGTGGGGCATTCAAGAGTTCCTTCCACA...CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACCTAATAAAGGTCCTCTaGAGCGTACAACTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHLIKVL*SVQLLE
Trigger: TTCCAGGAGTTGTACGCTTCAGAGGACCTTTATTAG...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp AGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTCCTCTCCAAGGTTTACGTCACCTACACCTCTTaGCATAAAGGCAAGTTTGGG +
Preference number: 4 (lower is better)
Translates to: STWYISSHSRAPLLSKVYVTYTS*HKGKFG
Trigger: CCCAAACTTGCCTTTATGTCAAGAGGTGTAGGTGAC...GTAAACCTTGGAGAGGAGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR TCA 90 bp AAGGTTACACTAGGTTGTCTCCCAAAGTGGTCCCCAGACATGCCTGTCACCCATAGACATCTCTGTAAGTaGCTTTGCAGGGTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: KVTLGCLPKWSPDMPVTHRHLCK*LCRVFC
Trigger: GCAGAAGACCCTGCAAAGTCACTTACAGAGATGTCT...ATGGGTGACAGGCATGTCTGGGGACCACTTTGGGAGACAACCTAGTGTAACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR TCA 90 bp AACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTAGACATCTCTGTAAGTaGCTTTGCAGGGTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: NHKLEEDTALRFVLSLPTRHLCK*LCRVFC
Trigger: GCAGAAGACCCTGCAAAGTCACTTACAGAGATGTCT...AGTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp CGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTAGAGAGAGTGGACTATaGGCCATGCTGCCATTAGTA +
Preference number: 4 (lower is better)
Translates to: RTEPQAGGRHSTKVCAVSRESGL*AMLPLV
Trigger: TACTAATGGCAGCATGGCTCATAGTCCACTCTCTCT...AGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp AAAAGCACAGGGAACTGTGCTGAGGCCCCTGGTGCCTGGGAGGATAATCCCTTCTTACACCTTTCAATTTaGTTGGAAACAGGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: KSTGNCAEAPGAWEDNPFLHLSI*LETGCK
Trigger: CTTGCAGCCTGTTTCCAATCAAATTGAAAGGTGTAA...GAAGGGATTATCCTCCCAGGCACCAGGGGCCTCAGCACAGTTCCCTGTGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR TCA 90 bp CAACCCTCTTTGCTCACTGGCTCCCACTATAACAGCCTCTTCTCCACCCACCCATTCAGAGGTAAAACCTaGTGCAGCCTCAACTTTTTC +
Preference number: 4 (lower is better)
Translates to: QPSLLTGSHYNSLFSTHPFRGKT*CSLNFF
Trigger: GAAAAAGTTGAGGCTGCATCAGGTTTTACCTCTGAA...TGGGTGGGTGGAGAAGAGGCTGTTATAGTGGGAGCCAGTGAGCAAAGAGGGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR TCA 90 bp CAACCCTCTTTGCTCACTGGCTCCCACTATAACAGCCTCTTCTCCACCCACCCACTGGATAATCAAGCATaGTGGTGCCTCTGCAAATTT +
Preference number: 4 (lower is better)
Translates to: QPSLLTGSHYNSLFSTHPLDNQA*WCLCKF
Trigger: AAATTTGCAGAGGCACCATCATGCTTGATTATCCAG...TGGGTGGGTGGAGAAGAGGCTGTTATAGTGGGAGCCAGTGAGCAAAGAGGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR TCA 90 bp AAGGGCCATCATCAAAAGAGACACCCATTGCCGGCAATGGGTGCCGGACAGAACCTGGATAATCAAGCATaGTGGTGCCTCTGCAAATTT +
Preference number: 4 (lower is better)
Translates to: KGHHQKRHPLPAMGAGQNLDNQA*WCLCKF
Trigger: AAATTTGCAGAGGCACCATCATGCTTGATTATCCAG...GTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTCTTACAGAACTGCTTaGTCTTCCCAGCTGAGATGT +
Preference number: 4 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHSYRTA*SSQLRC
Trigger: ACATCTCAGCTGGGAAGATCAAGCAGTTCTGTAAGA...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTGTATCTCCTGGGCCTaGAAAATCACTTTCCAATCC +
Preference number: 4 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHCISWA*KITFQS
Trigger: GGATTGGAAAGTGATTTTGCAGGCCCAGGAGATACA...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp CGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTTCCATCTGTACAGCCTaGGCATTCATCTTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: RTEPQAGGRHSTKVCAVSSICTA*AFIFQF
Trigger: GAACTGGAAGATGAATGCGCAGGCTGTACAGATGGA...AGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp AAGGGCCATCATCAAAAGAGACACCCATTGCCGGCAATGGGTGCCGGACAGAACTGTAATGGCCCTGGATaGCTTTCTTCTTTCCAATCA +
Preference number: 4 (lower is better)
Translates to: KGHHQKRHPLPAMGAGQNCNGPG*LSSFQS
Trigger: TGATTGGAAAGAAGAAAGGCATCCAGGGCCATTACA...GTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp TTGGTGCTAACTCTGAGCCAGCTTCACTTTCTCTGGACTGTGGGTCTGTATAAGCATCGCAAAGAAGTCTaGGCGCACAGCCTTGAATCC +
Preference number: 4 (lower is better)
Translates to: LVLTLSQLHFLWTVGLYKHRKEV*AHSLES
Trigger: GGATTCAAGGCTGTGCGCGCAGACTTCTTTGCGATG...CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACGTACATGCACATGTATaGATCGCAAAGAAGTCTGCG +
Preference number: 4 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHVHAHV*IAKKSA
Trigger: CGCAGACTTCTTTGCGATGCATACATGTGCATGTAC...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp AACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTGAAGTAACTTTCTCTTaGCTCCACAGGCCTGAACTC +
Preference number: 4 (lower is better)
Translates to: NHKLEEDTALRFVLSLPTEVTFS*LHRPEL
Trigger: GAGTTCAGGCCTGTGGAGCCAAGAGAAAGTTACTTC...AGTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACCTGCATTGTATCTCCTaGGCCTGCAAAATCACTTTC +
Preference number: 4 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHLHCIS*ACKITF
Trigger: GAAAGTGATTTTGCAGGCCCAGGAGATACAATGCAG...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp AAAAGCACAGGGAACTGTGCTGAGGCCCCTGGTGCCTGGGAGGATAATCCCTTCCCTTCAAAGAAACTCTaGAGTTTATTTCCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: KSTGNCAEAPGAWEDNPFPSKKL*SLFPKG
Trigger: CCCCTTTGGAAATAAACTCCAGAGTTTCTTTGAAGG...GAAGGGATTATCCTCCCAGGCACCAGGGGCCTCAGCACAGTTCCCTGTGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp CCGGCAATGGGTGCCGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGATGGATTTTTGGACTTaGATTGTTGTGAGTCAACAG +
Preference number: 4 (lower is better)
Translates to: PAMGAGQNHKLEEDTALRMDFWT*IVVSQQ
Trigger: CTGTTGACTCACAACAATCCAAGTCCAAAAATCCAT...CCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp CCGGCAATGGGTGCCGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTGTACCATGGATTTTTaGACTTGGATTGTTGTGAGT +
Preference number: 4 (lower is better)
Translates to: PAMGAGQNHKLEEDTALRCTMDF*TWIVVS
Trigger: ACTCACAACAATCCAAGTCCAAAAATCCATGGTACA...CCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp AGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTCCTCTCCAAGGTTTACCTGAAGGGTAAGGAGTaGAATCTGTTCTCGCTAGAC +
Preference number: 4 (lower is better)
Translates to: STWYISSHSRAPLLSKVYLKGKE*NLFSLD
Trigger: GTCTAGCGAGAACAGATTCCACTCCTTACCCTTCAG...GTAAACCTTGGAGAGGAGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp CATAAATACTTGTTGGCAGTTACTCACCAGGCCAAGTACGGGGTTTTGCACTCCCATTCCCAGAAGAGATaGGCAAGGGTGGACTCTCCT +
Preference number: 4 (lower is better)
Translates to: HKYLLAVTHQAKYGVLHSHSQKR*ARVDSP
Trigger: AGGAGAGTCCACCCTTGCCCATCTCTTCTGGGAATG...GGAGTGCAAAACCCCGTACTTGGCCTGGTGAGTAACTGCCAACAAGTATTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp CCGGCAATGGGTGCCGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGATAACTGCTGAATTGTaGGTACTCCAACTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: PAMGAGQNHKLEEDTALRITAEL*VLQLSH
Trigger: ATGAGAAAGTTGGAGTACCCACAATTCAGCAGTTAT...CCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp AGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTCCTCTCCAAGGTTTACAGATGCGGCACTGCCTaGGAGTGTCTTCAAGTAAAT +
Preference number: 4 (lower is better)
Translates to: STWYISSHSRAPLLSKVYRCGTA*ECLQVN
Trigger: ATTTACTTGAAGACACTCCCAGGCAGTGCCGCATCT...GTAAACCTTGGAGAGGAGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp CGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTAGATGCGGCACTGCCTaGGAGTGTCTTCAAGTAAAT +
Preference number: 4 (lower is better)
Translates to: RTEPQAGGRHSTKVCAVSRCGTA*ECLQVN
Trigger: ATTTACTTGAAGACACTCCCAGGCAGTGCCGCATCT...AGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACAATGATTCAACCTCCTaGGATGAAGGTGAACCTGAG +
Preference number: 4 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHNDSTS*DEGEPE
Trigger: CTCAGGTTCACCTTCATCCCAGGAGGTTGAATCATT...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACCTCATGGTTGGACTCTaGTACATGCACATGTATGCA +
Preference number: 4 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHLMVGL*YMHMYA
Trigger: TGCATACATGTGCATGTACCAGAGTCCAACCATGAG...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp AACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTGTACAGGCTCATGGTTaGACTCTGGTACATGCACAT +
Preference number: 4 (lower is better)
Translates to: NHKLEEDTALRFVLSLPTVQAHG*TLVHAH
Trigger: ATGTGCATGTACCAGAGTCCAACCATGAGCCTGTAC...AGTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACATTTGTACAGGCTCATaGTTGGACTCTGGTACATGC +
Preference number: 4 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHICTGS*LDSGTC
Trigger: GCATGTACCAGAGTCCAACCATGAGCCTGTACAAAT...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
3UTR CAA 72 bp GGAACTAGAACACATACTGCACTCCTTTGGGTCAGCTaGATAATAACCACCTCCCTGGAGAGTACCAGGGAG +
Preference number: 4 (lower is better)
Translates to: GTRTHTALLWVS*IITTSLESTRE
Trigger: CTCCCTGGTACTCTCCAGGGAGGTGGTTATTATCAAGCTGACCCAAAGGAGTGCAGTATGTGTTCTAGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR TCA 90 bp CGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTTTCTTCCCAGTAGGGTaGAGTAACTTTCTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: RTEPQAGGRHSTKVCAVSFFPVG*SNFLLA
Trigger: AGCCAAGAGAAAGTTACTTCACCCTACTGGGAAGAA...AGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp AACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTCTAATAAAGGTCCTCTaGAGCGTACAACTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: NHKLEEDTALRFVLSLPTLIKVL*SVQLLE
Trigger: TTCCAGGAGTTGTACGCTTCAGAGGACCTTTATTAG...AGTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp CATAAATACTTGTTGGCAGTTACTCACCAGGCCAAGTACGGGGTTTTGCACTCCCCATCCGTGAAACCTTaGCCACGACCTTCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: HKYLLAVTHQAKYGVLHSPSVKP*PRPSSN
Trigger: ATTGGAAGAAGGTCGTGGTCAAGGTTTCACGGATGG...GGAGTGCAAAACCCCGTACTTGGCCTGGTGAGTAACTGCCAACAAGTATTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR TCA 90 bp TTGGTGCTAACTCTGAGCCAGCTTCACTTTCTCTGGACTGTGGGTCTGTATAAGGATATACCCCATCCGTaGAACCTTGACCACGACCTT +
Preference number: 4 (lower is better)
Translates to: LVLTLSQLHFLWTVGLYKDIPHP*NLDHDL
Trigger: AAGGTCGTGGTCAAGGTTTCACGGATGGGGTATATC...CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp AACACATACTGCACTCCTTTGGGTCAGCTTGATAATAACCACCTCCCTGGAGAGGCATCTTTGTCAGGCTaGAGGGTAAGGAGTGGAATC +
Preference number: 4 (lower is better)
Translates to: NTYCTPLGQLDNNHLPGEASLSG*RVRSGI
Trigger: GATTCCACTCCTTACCCTTCAGCCTGACAAAGATGC...CTCTCCAGGGAGGTGGTTATTATCAAGCTGACCCAAAGGAGTGCAGTATGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR TCA 90 bp AAGGGCCATCATCAAAAGAGACACCCATTGCCGGCAATGGGTGCCGGACAGAACTTACACCTTTCAATTTaGTTGGAAACAGGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: KGHHQKRHPLPAMGAGQNLHLSI*LETGCK
Trigger: CTTGCAGCCTGTTTCCAATCAAATTGAAAGGTGTAA...GTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp CAACCCTCTTTGCTCACTGGCTCCCACTATAACAGCCTCTTCTCCACCCACCCAATATTCTCAGAGGATTaGCTATCTCTGTCCTCAGTA +
Preference number: 4 (lower is better)
Translates to: QPSLLTGSHYNSLFSTHPIFSED*LSLSSV
Trigger: TACTGAGGACAGAGATAGTCAATCCTCTGAGAATAT...TGGGTGGGTGGAGAAGAGGCTGTTATAGTGGGAGCCAGTGAGCAAAGAGGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR TCA 90 bp AAGGGCCATCATCAAAAGAGACACCCATTGCCGGCAATGGGTGCCGGACAGAACATATTCTCAGAGGATTaGCTATCTCTGTCCTCAGTA +
Preference number: 4 (lower is better)
Translates to: KGHHQKRHPLPAMGAGQNIFSED*LSLSSV
Trigger: TACTGAGGACAGAGATAGTCAATCCTCTGAGAATAT...GTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTTCAGAGGTAAAACCTaGTGCAGCCTCAACTTTTTC +
Preference number: 4 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHFRGKT*CSLNFF
Trigger: GAAAAAGTTGAGGCTGCATCAGGTTTTACCTCTGAA...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp CATAAATACTTGTTGGCAGTTACTCACCAGGCCAAGTACGGGGTTTTGCACTCCCTTGATCTTCCCAGCTaGGATGTCCGGATCGTCATA +
Preference number: 4 (lower is better)
Translates to: HKYLLAVTHQAKYGVLHSLDLPS*DVRIVI
Trigger: TATGACGATCCGGACATCTCAGCTGGGAAGATCAAG...GGAGTGCAAAACCCCGTACTTGGCCTGGTGAGTAACTGCCAACAAGTATTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR TCA 90 bp TTGGTGCTAACTCTGAGCCAGCTTCACTTTCTCTGGACTGTGGGTCTGTATAAGCTTGATCTTCCCAGCTaGGATGTCCGGATCGTCATA +
Preference number: 4 (lower is better)
Translates to: LVLTLSQLHFLWTVGLYKLDLPS*DVRIVI
Trigger: TATGACGATCCGGACATCTCAGCTGGGAAGATCAAG...CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp CGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTTCTTACAGAACTGCTTaGTCTTCCCAGCTGAGATGT +
Preference number: 4 (lower is better)
Translates to: RTEPQAGGRHSTKVCAVSSYRTA*SSQLRC
Trigger: ACATCTCAGCTGGGAAGATCAAGCAGTTCTGTAAGA...AGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp TTGGTGCTAACTCTGAGCCAGCTTCACTTTCTCTGGACTGTGGGTCTGTATAAGAATAACTCCATCTTCTaGCAGGGGATGCAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: LVLTLSQLHFLWTVGLYKNNSIF*QGMQPC
Trigger: ACACGGCTGCATCCCCTGTCAGAAGATGGAGTTATT...CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp CATAAATACTTGTTGGCAGTTACTCACCAGGCCAAGTACGGGGTTTTGCACTCCGAAGGAACTCTTGAATaGCCCACAGAACGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: HKYLLAVTHQAKYGVLHSEGTLE*PTERSW
Trigger: CCAAGACCGTTCTGTGGGGCATTCAAGAGTTCCTTC...GGAGTGCAAAACCCCGTACTTGGCCTGGTGAGTAACTGCCAACAAGTATTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp AAGGGCCATCATCAAAAGAGACACCCATTGCCGGCAATGGGTGCCGGACAGAACAGAACTGCATGCGGTTaGTCCAAGATTTTTAATCCA +
Preference number: 4 (lower is better)
Translates to: KGHHQKRHPLPAMGAGQNRTACG*SKIFNP
Trigger: TGGATTAAAAATCTTGGAGCAACCGCATGCAGTTCT...GTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp AAGGTTACACTAGGTTGTCTCCCAAAGTGGTCCCCAGACATGCCTGTCACCCATTGTATCTCCTGGGCCTaGAAAATCACTTTCCAATCC +
Preference number: 4 (lower is better)
Translates to: KVTLGCLPKWSPDMPVTHCISWA*KITFQS
Trigger: GGATTGGAAAGTGATTTTGCAGGCCCAGGAGATACA...ATGGGTGACAGGCATGTCTGGGGACCACTTTGGGAGACAACCTAGTGTAACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp TTAATGATACAGAAAGAGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTGGGGGAGGTTCAACCTaGATTGTATCTCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LMIQKEYMVHLFSQPRSTGGGST*IVSPGP
Trigger: AGGCCCAGGAGATACAATGCAGGTTGAACCTCCCCC...AGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACTCTTTCTGTATCATTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp CCACCCAGTCTAGGCACTCAGCTATATAAAAGTCTGTGCACAGTATACACACTTGGGGGAGGTTCAACCTaGATTGTATCTCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: PPSLGTQLYKSLCTVYTLGGGST*IVSPGP
Trigger: AGGCCCAGGAGATACAATGCAGGTTGAACCTCCCCC...AAGTGTGTATACTGTGCACAGACTTTTATATAGCTGAGTGCCTAGACTGGGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp AAGGGCCATCATCAAAAGAGACACCCATTGCCGGCAATGGGTGCCGGACAGAACAGTGGCTCGTTTCTATaGAGAGAACAGCAAATAACT +
Preference number: 4 (lower is better)
Translates to: KGHHQKRHPLPAMGAGQNSGSFL*REQQIT
Trigger: AGTTATTTGCTGTTCTCTGCATAGAAACGAGCCACT...GTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp AACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTGAAGCGTACAACTCCTaGAAATTTCTCTTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: NHKLEEDTALRFVLSLPTEAYNS*KFLFPR
Trigger: TCTGGGGAAGAGAAATTTCCAGGAGTTGTACGCTTC...AGTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp AAGGTTACACTAGGTTGTCTCCCAAAGTGGTCCCCAGACATGCCTGTCACCCATGAAGCGTACAACTCCTaGAAATTTCTCTTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: KVTLGCLPKWSPDMPVTHEAYNS*KFLFPR
Trigger: TCTGGGGAAGAGAAATTTCCAGGAGTTGTACGCTTC...ATGGGTGACAGGCATGTCTGGGGACCACTTTGGGAGACAACCTAGTGTAACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp AGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTCCTCTCCAAGGTTTACCTGCATTGTATCTCCTaGGCCTGCAAAATCACTTTC +
Preference number: 4 (lower is better)
Translates to: STWYISSHSRAPLLSKVYLHCIS*ACKITF
Trigger: GAAAGTGATTTTGCAGGCCCAGGAGATACAATGCAG...GTAAACCTTGGAGAGGAGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp CGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTCTGCATTGTATCTCCTaGGCCTGCAAAATCACTTTC +
Preference number: 4 (lower is better)
Translates to: RTEPQAGGRHSTKVCAVSLHCIS*ACKITF
Trigger: GAAAGTGATTTTGCAGGCCCAGGAGATACAATGCAG...AGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp CAACCCTCTTTGCTCACTGGCTCCCACTATAACAGCCTCTTCTCCACCCACCCACCTTCAAAGAAACTCTaGAGTTTATTTCCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: QPSLLTGSHYNSLFSTHPPSKKL*SLFPKG
Trigger: CCCCTTTGGAAATAAACTCCAGAGTTTCTTTGAAGG...TGGGTGGGTGGAGAAGAGGCTGTTATAGTGGGAGCCAGTGAGCAAAGAGGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp AAAAGCACAGGGAACTGTGCTGAGGCCCCTGGTGCCTGGGAGGATAATCCCTTCTGTACCATGGATTTTTaGACTTGGATTGTTGTGAGT +
Preference number: 4 (lower is better)
Translates to: KSTGNCAEAPGAWEDNPFCTMDF*TWIVVS
Trigger: ACTCACAACAATCCAAGTCCAAAAATCCATGGTACA...GAAGGGATTATCCTCCCAGGCACCAGGGGCCTCAGCACAGTTCCCTGTGCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp CCACAAAACAACACTCAGACAACAAGCACTCTACAGCATCCACCACGGTCTATACATTCCCAGAAGAGATaGGCAAGGGTGGACTCTCCT +
Preference number: 4 (lower is better)
Translates to: PQNNTQTTSTLQHPPRSIHSQKR*ARVDSP
Trigger: AGGAGAGTCCACCCTTGCCCATCTCTTCTGGGAATG...TATAGACCGTGGTGGATGCTGTAGAGTGCTTGTTGTCTGAGTGTTGTTTTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp AAAAGCACAGGGAACTGTGCTGAGGCCCCTGGTGCCTGGGAGGATAATCCCTTCATAACTGCTGAATTGTaGGTACTCCAACTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: KSTGNCAEAPGAWEDNPFITAEL*VLQLSH
Trigger: ATGAGAAAGTTGGAGTACCCACAATTCAGCAGTTAT...GAAGGGATTATCCTCCCAGGCACCAGGGGCCTCAGCACAGTTCCCTGTGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp AACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTAATGATTCAACCTCCTaGGATGAAGGTGAACCTGAG +
Preference number: 4 (lower is better)
Translates to: NHKLEEDTALRFVLSLPTNDSTS*DEGEPE
Trigger: CTCAGGTTCACCTTCATCCCAGGAGGTTGAATCATT...AGTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp AGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTCCTCTCCAAGGTTTACCTCATGGTTGGACTCTaGTACATGCACATGTATGCA +
Preference number: 4 (lower is better)
Translates to: STWYISSHSRAPLLSKVYLMVGL*YMHMYA
Trigger: TGCATACATGTGCATGTACCAGAGTCCAACCATGAG...GTAAACCTTGGAGAGGAGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp AACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTCTCATGGTTGGACTCTaGTACATGCACATGTATGCA +
Preference number: 4 (lower is better)
Translates to: NHKLEEDTALRFVLSLPTLMVGL*YMHMYA
Trigger: TGCATACATGTGCATGTACCAGAGTCCAACCATGAG...AGTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp CGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTATTTGTACAGGCTCATaGTTGGACTCTGGTACATGC +
Preference number: 4 (lower is better)
Translates to: RTEPQAGGRHSTKVCAVSICTGS*LDSGTC
Trigger: GCATGTACCAGAGTCCAACCATGAGCCTGTACAAAT...AGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp AAGGTTACACTAGGTTGTCTCCCAAAGTGGTCCCCAGACATGCCTGTCACCCATATTTGTACAGGCTCATaGTTGGACTCTGGTACATGC +
Preference number: 4 (lower is better)
Translates to: KVTLGCLPKWSPDMPVTHICTGS*LDSGTC
Trigger: GCATGTACCAGAGTCCAACCATGAGCCTGTACAAAT...ATGGGTGACAGGCATGTCTGGGGACCACTTTGGGAGACAACCTAGTGTAACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp CGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTCTGTGTCACGCTATCTaGGATGATGTCATTGATGTG +
Preference number: 4 (lower is better)
Translates to: RTEPQAGGRHSTKVCAVSLCHAI*DDVIDV
Trigger: CACATCAATGACATCATCCCAGATAGCGTGACACAG...AGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp CAACCCTCTTTGCTCACTGGCTCCCACTATAACAGCCTCTTCTCCACCCACCCATTTATTATGACTAGATaGACCTTTGTCACCTACACC +
Preference number: 4 (lower is better)
Translates to: QPSLLTGSHYNSLFSTHPFIMTR*TFVTYT
Trigger: GGTGTAGGTGACAAAGGTTCATCTAGTCATAATAAA...TGGGTGGGTGGAGAAGAGGCTGTTATAGTGGGAGCCAGTGAGCAAAGAGGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR TCA 90 bp AAGGGCCATCATCAAAAGAGACACCCATTGCCGGCAATGGGTGCCGGACAGAACTTTATTATGACTAGATaGACCTTTGTCACCTACACC +
Preference number: 4 (lower is better)
Translates to: KGHHQKRHPLPAMGAGQNFIMTR*TFVTYT
Trigger: GGTGTAGGTGACAAAGGTTCATCTAGTCATAATAAA...GTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp TTGGTGCTAACTCTGAGCCAGCTTCACTTTCTCTGGACTGTGGGTCTGTATAAGAGACATCTCTGTAAGTaGCTTTGCAGGGTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LVLTLSQLHFLWTVGLYKRHLCK*LCRVFC
Trigger: GCAGAAGACCCTGCAAAGTCACTTACAGAGATGTCT...CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp CCACAAAACAACACTCAGACAACAAGCACTCTACAGCATCCACCACGGTCTATAGCATCTTTGTCAGGCTaGAGGGTAAGGAGTGGAATC +
Preference number: 4 (lower is better)
Translates to: PQNNTQTTSTLQHPPRSIASLSG*RVRSGI
Trigger: GATTCCACTCCTTACCCTTCAGCCTGACAAAGATGC...TATAGACCGTGGTGGATGCTGTAGAGTGCTTGTTGTCTGAGTGTTGTTTTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTTACACCTTTCAATTTaGTTGGAAACAGGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHLHLSI*LETGCK
Trigger: CTTGCAGCCTGTTTCCAATCAAATTGAAAGGTGTAA...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACATATTCTCAGAGGATTaGCTATCTCTGTCCTCAGTA +
Preference number: 4 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHIFSED*LSLSSV
Trigger: TACTGAGGACAGAGATAGTCAATCCTCTGAGAATAT...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp AAGGTTACACTAGGTTGTCTCCCAAAGTGGTCCCCAGACATGCCTGTCACCCATTTCAGAGGTAAAACCTaGTGCAGCCTCAACTTTTTC +
Preference number: 4 (lower is better)
Translates to: KVTLGCLPKWSPDMPVTHFRGKT*CSLNFF
Trigger: GAAAAAGTTGAGGCTGCATCAGGTTTTACCTCTGAA...ATGGGTGACAGGCATGTCTGGGGACCACTTTGGGAGACAACCTAGTGTAACCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR TCA 90 bp AACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTTTCAGAGGTAAAACCTaGTGCAGCCTCAACTTTTTC +
Preference number: 4 (lower is better)
Translates to: NHKLEEDTALRFVLSLPTFRGKT*CSLNFF
Trigger: GAAAAAGTTGAGGCTGCATCAGGTTTTACCTCTGAA...AGTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp AACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTCTGGATAATCAAGCATaGTGGTGCCTCTGCAAATTT +
Preference number: 4 (lower is better)
Translates to: NHKLEEDTALRFVLSLPTLDNQA*WCLCKF
Trigger: AAATTTGCAGAGGCACCATCATGCTTGATTATCCAG...AGTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp CCACAAAACAACACTCAGACAACAAGCACTCTACAGCATCCACCACGGTCTATAGAAGGAACTCTTGAATaGCCCACAGAACGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: PQNNTQTTSTLQHPPRSIEGTLE*PTERSW
Trigger: CCAAGACCGTTCTGTGGGGCATTCAAGAGTTCCTTC...TATAGACCGTGGTGGATGCTGTAGAGTGCTTGTTGTCTGAGTGTTGTTTTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp AGCTACAGAGCAAGTGATGGAGAAAGAACCCAGGATTTTTGTCTCTTAGTCCTTGGGGGAGGTTCAACCTaGATTGTATCTCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: SYRASDGERTQDFCLLVLGGGST*IVSPGP
Trigger: AGGCCCAGGAGATACAATGCAGGTTGAACCTCCCCC...AAGGACTAAGAGACAAAAATCCTGGGTTCTTTCTCCATCACTTGCTCTGTAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp TTGGTGCTAACTCTGAGCCAGCTTCACTTTCTCTGGACTGTGGGTCTGTATAAGCAGTTTCACAAACAGTaGCTTCTTCAGGGCACACGT +
Preference number: 4 (lower is better)
Translates to: LVLTLSQLHFLWTVGLYKQFHKQ*LLQGTR
Trigger: ACGTGTGCCCTGAAGAAGGCACTGTTTGTGAAACTG...CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp AACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTTGTAATGGCCCTGGATaGCTTTCTTCTTTCCAATCA +
Preference number: 4 (lower is better)
Translates to: NHKLEEDTALRFVLSLPTCNGPG*LSSFQS
Trigger: TGATTGGAAAGAAGAAAGGCATCCAGGGCCATTACA...AGTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp CCACCCAGTCTAGGCACTCAGCTATATAAAAGTCTGTGCACAGTATACACACTTCGTCATAGCACTCCCTaGACTCGTACATCGCAAGTC +
Preference number: 4 (lower is better)
Translates to: PPSLGTQLYKSLCTVYTLRHSTP*TRTSQV
Trigger: GACTTGCGATGTACGAGTGCAGGGAGTGCTATGACG...AAGTGTGTATACTGTGCACAGACTTTTATATAGCTGAGTGCCTAGACTGGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp AACACATACTGCACTCCTTTGGGTCAGCTTGATAATAACCACCTCCCTGGAGAGCAGGTCTTACAGAACTaGTTGATCTTCCCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: NTYCTPLGQLDNNHLPGEQVLQN*LIFPAE
Trigger: CTCAGCTGGGAAGATCAAGCAGTTCTGTAAGACCTG...CTCTCCAGGGAGGTGGTTATTATCAAGCTGACCCAAAGGAGTGCAGTATGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp TTGGTGCTAACTCTGAGCCAGCTTCACTTTCTCTGGACTGTGGGTCTGTATAAGCAGGTCTTACAGAACTaGTTGATCTTCCCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LVLTLSQLHFLWTVGLYKQVLQN*LIFPAE
Trigger: CTCAGCTGGGAAGATCAAGCAGTTCTGTAAGACCTG...CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp CCACCCAGTCTAGGCACTCAGCTATATAAAAGTCTGTGCACAGTATACACACTTCATCGCAAAGAAGTCTaGGCGCACAGCCTTGAATCC +
Preference number: 4 (lower is better)
Translates to: PPSLGTQLYKSLCTVYTLHRKEV*AHSLES
Trigger: GGATTCAAGGCTGTGCGCGCAGACTTCTTTGCGATG...AAGTGTGTATACTGTGCACAGACTTTTATATAGCTGAGTGCCTAGACTGGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp TTGGTGCTAACTCTGAGCCAGCTTCACTTTCTCTGGACTGTGGGTCTGTATAAGGAAGTAACTTTCTCTTaGCTCCACAGGCCTGAACTC +
Preference number: 4 (lower is better)
Translates to: LVLTLSQLHFLWTVGLYKEVTFS*LHRPEL
Trigger: GAGTTCAGGCCTGTGGAGCCAAGAGAAAGTTACTTC...CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp CATAAATACTTGTTGGCAGTTACTCACCAGGCCAAGTACGGGGTTTTGCACTCCGAAGTAACTTTCTCTTaGCTCCACAGGCCTGAACTC +
Preference number: 4 (lower is better)
Translates to: HKYLLAVTHQAKYGVLHSEVTFS*LHRPEL
Trigger: GAGTTCAGGCCTGTGGAGCCAAGAGAAAGTTACTTC...GGAGTGCAAAACCCCGTACTTGGCCTGGTGAGTAACTGCCAACAAGTATTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp TTGGTGCTAACTCTGAGCCAGCTTCACTTTCTCTGGACTGTGGGTCTGTATAAGCCCACAGAACGGTCTTaGATGTACTGTCCTATACTC +
Preference number: 4 (lower is better)
Translates to: LVLTLSQLHFLWTVGLYKPTERS*MYCPIL
Trigger: GAGTATAGGACAGTACATCCAAGACCGTTCTGTGGG...CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp AGCTACAGAGCAAGTGATGGAGAAAGAACCCAGGATTTTTGTCTCTTAGTCCTTCTGCCCACGTCTACCTaGAGGCCTTTACTTAGTCGG +
Preference number: 4 (lower is better)
Translates to: SYRASDGERTQDFCLLVLLPTST*RPLLSR
Trigger: CCGACTAAGTAAAGGCCTCCAGGTAGACGTGGGCAG...AAGGACTAAGAGACAAAAATCCTGGGTTCTTTCTCCATCACTTGCTCTGTAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp TTGGTGCTAACTCTGAGCCAGCTTCACTTTCTCTGGACTGTGGGTCTGTATAAGCTGAAGGGTAAGGAGTaGAATCTGTTCTCGCTAGAC +
Preference number: 4 (lower is better)
Translates to: LVLTLSQLHFLWTVGLYKLKGKE*NLFSLD
Trigger: GTCTAGCGAGAACAGATTCCACTCCTTACCCTTCAG...CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp AACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTAGTCAGGCAAGTCTTTaGGAAGTGATACTGGATGAT +
Preference number: 4 (lower is better)
Translates to: NHKLEEDTALRFVLSLPTSQASL*EVILDD
Trigger: ATCATCCAGTATCACTTCCCAAAGACTTGCCTGACT...AGTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp TTGGTGCTAACTCTGAGCCAGCTTCACTTTCTCTGGACTGTGGGTCTGTATAAGGTACAGGCTCATGGTTaGACTCTGGTACATGCACAT +
Preference number: 4 (lower is better)
Translates to: LVLTLSQLHFLWTVGLYKVQAHG*TLVHAH
Trigger: ATGTGCATGTACCAGAGTCCAACCATGAGCCTGTAC...CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp CCACCCAGTCTAGGCACTCAGCTATATAAAAGTCTGTGCACAGTATACACACTTGATATACCCCATCCGTaGAACCTTGACCACGACCTT +
Preference number: 4 (lower is better)
Translates to: PPSLGTQLYKSLCTVYTLDIPHP*NLDHDL
Trigger: AAGGTCGTGGTCAAGGTTTCACGGATGGGGTATATC...AAGTGTGTATACTGTGCACAGACTTTTATATAGCTGAGTGCCTAGACTGGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR TCA 90 bp CCACAAAACAACACTCAGACAACAAGCACTCTACAGCATCCACCACGGTCTATAGTCACCTACACCTCTTaGCATAAAGGCAAGTTTGGG +
Preference number: 4 (lower is better)
Translates to: PQNNTQTTSTLQHPPRSIVTYTS*HKGKFG
Trigger: CCCAAACTTGCCTTTATGTCAAGAGGTGTAGGTGAC...TATAGACCGTGGTGGATGCTGTAGAGTGCTTGTTGTCTGAGTGTTGTTTTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTTTATTATGACTAGATaGACCTTTGTCACCTACACC +
Preference number: 4 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHFIMTR*TFVTYT
Trigger: GGTGTAGGTGACAAAGGTTCATCTAGTCATAATAAA...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp CCACAAAACAACACTCAGACAACAAGCACTCTACAGCATCCACCACGGTCTATAAGACATCTCTGTAAGTaGCTTTGCAGGGTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: PQNNTQTTSTLQHPPRSIRHLCK*LCRVFC
Trigger: GCAGAAGACCCTGCAAAGTCACTTACAGAGATGTCT...TATAGACCGTGGTGGATGCTGTAGAGTGCTTGTTGTCTGAGTGTTGTTTTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp TTAATGATACAGAAAGAGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTGCATCTTTGTCAGGCTaGAGGGTAAGGAGTGGAATC +
Preference number: 4 (lower is better)
Translates to: LMIQKEYMVHLFSQPRSTASLSG*RVRSGI
Trigger: GATTCCACTCCTTACCCTTCAGCCTGACAAAGATGC...AGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACTCTTTCTGTATCATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR TCA 90 bp CCACAAAACAACACTCAGACAACAAGCACTCTACAGCATCCACCACGGTCTATAAGAGAGAGTGGACTATaGGCCATGCTGCCATTAGTA +
Preference number: 4 (lower is better)
Translates to: PQNNTQTTSTLQHPPRSIRESGL*AMLPLV
Trigger: TACTAATGGCAGCATGGCTCATAGTCCACTCTCTCT...TATAGACCGTGGTGGATGCTGTAGAGTGCTTGTTGTCTGAGTGTTGTTTTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp AACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTTTACACCTTTCAATTTaGTTGGAAACAGGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: NHKLEEDTALRFVLSLPTLHLSI*LETGCK
Trigger: CTTGCAGCCTGTTTCCAATCAAATTGAAAGGTGTAA...AGTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp TTAATGATACAGAAAGAGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTCTTGATCTTCCCAGCTaGGATGTCCGGATCGTCATA +
Preference number: 4 (lower is better)
Translates to: LMIQKEYMVHLFSQPRSTLDLPS*DVRIVI
Trigger: TATGACGATCCGGACATCTCAGCTGGGAAGATCAAG...AGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACTCTTTCTGTATCATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR TCA 90 bp CCACCCAGTCTAGGCACTCAGCTATATAAAAGTCTGTGCACAGTATACACACTTAATAACTCCATCTTCTaGCAGGGGATGCAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: PPSLGTQLYKSLCTVYTLNNSIF*QGMQPC
Trigger: ACACGGCTGCATCCCCTGTCAGAAGATGGAGTTATT...AAGTGTGTATACTGTGCACAGACTTTTATATAGCTGAGTGCCTAGACTGGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp AACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTAGAACTGCATGCGGTTaGTCCAAGATTTTTAATCCA +
Preference number: 4 (lower is better)
Translates to: NHKLEEDTALRFVLSLPTRTACG*SKIFNP
Trigger: TGGATTAAAAATCTTGGAGCAACCGCATGCAGTTCT...AGTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp CGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTAGAACTGCATGCGGTTaGTCCAAGATTTTTAATCCA +
Preference number: 4 (lower is better)
Translates to: RTEPQAGGRHSTKVCAVSRTACG*SKIFNP
Trigger: TGGATTAAAAATCTTGGAGCAACCGCATGCAGTTCT...AGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTGTACTTTCAACACTTaGAAAACTACAGAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHCTFNT*KTTELY
Trigger: GTACAGCTCTGTAGTTTTGCAAGTGTTGAAAGTACA...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp AAGGGCCATCATCAAAAGAGACACCCATTGCCGGCAATGGGTGCCGGACAGAACATGATGTCATTGATGTaGAGGAGAATTGTACTTTCA +
Preference number: 4 (lower is better)
Translates to: KGHHQKRHPLPAMGAGQNMMSLM*RRIVLS
Trigger: TGAAAGTACAATTCTCCTGCACATCAATGACATCAT...GTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp AGCTACAGAGCAAGTGATGGAGAAAGAACCCAGGATTTTTGTCTCTTAGTCCTTCGTCATAGCACTCCCTaGACTCGTACATCGCAAGTC +
Preference number: 4 (lower is better)
Translates to: SYRASDGERTQDFCLLVLRHSTP*TRTSQV
Trigger: GACTTGCGATGTACGAGTGCAGGGAGTGCTATGACG...AAGGACTAAGAGACAAAAATCCTGGGTTCTTTCTCCATCACTTGCTCTGTAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp ACACAGAAACTCAGCAAAGTACAGACATGCAGGAAATCAGCACTATATAGGAAATCTTCTGACAGGGGATaGAGCCGTGTCTCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: TQKLSKVQTCRKSALYRKSSDRG*SRVSSP
Trigger: GGGACTGGAGACACGGCTGCATCCCCTGTCAGAAGA...TTTCCTATATAGTGCTGATTTCCTGCATGTCTGTACTTTGCTGAGTTTCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp AACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTAGTGGCTCGTTTCTATaGAGAGAACAGCAAATAACT +
Preference number: 4 (lower is better)
Translates to: NHKLEEDTALRFVLSLPTSGSFL*REQQIT
Trigger: AGTTATTTGCTGTTCTCTGCATAGAAACGAGCCACT...AGTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp CCACCCAGTCTAGGCACTCAGCTATATAAAAGTCTGTGCACAGTATACACACTTCTGGAATCCAAAGAGTaGAGGTCCTCCAGAGACATC +
Preference number: 4 (lower is better)
Translates to: PPSLGTQLYKSLCTVYTLLESKE*RSSRDI
Trigger: GATGTCTCTGGAGGACCTGCACTCTTTGGATTCCAG...AAGTGTGTATACTGTGCACAGACTTTTATATAGCTGAGTGCCTAGACTGGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp AGCTACAGAGCAAGTGATGGAGAAAGAACCCAGGATTTTTGTCTCTTAGTCCTTCATCGCAAAGAAGTCTaGGCGCACAGCCTTGAATCC +
Preference number: 4 (lower is better)
Translates to: SYRASDGERTQDFCLLVLHRKEV*AHSLES
Trigger: GGATTCAAGGCTGTGCGCGCAGACTTCTTTGCGATG...AAGGACTAAGAGACAAAAATCCTGGGTTCTTTCTCCATCACTTGCTCTGTAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp TTGGTGCTAACTCTGAGCCAGCTTCACTTTCTCTGGACTGTGGGTCTGTATAAGGTACATGCACATGTATaGATCGCAAAGAAGTCTGCG +
Preference number: 4 (lower is better)
Translates to: LVLTLSQLHFLWTVGLYKVHAHV*IAKKSA
Trigger: CGCAGACTTCTTTGCGATGCATACATGTGCATGTAC...CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp AACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTTTTTCTTGCCTTTTGTaGAAGGAACTCTTGAATGCC +
Preference number: 4 (lower is better)
Translates to: NHKLEEDTALRFVLSLPTFSCLL*KELLNA
Trigger: GGCATTCAAGAGTTCCTTCCACAAAAGGCAAGAAAA...AGTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp CGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTTTTTCTTGCCTTTTGTaGAAGGAACTCTTGAATGCC +
Preference number: 4 (lower is better)
Translates to: RTEPQAGGRHSTKVCAVSFSCLL*KELLNA
Trigger: GGCATTCAAGAGTTCCTTCCACAAAAGGCAAGAAAA...AGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp TTGGTGCTAACTCTGAGCCAGCTTCACTTTCTCTGGACTGTGGGTCTGTATAAGGAAGCGTACAACTCCTaGAAATTTCTCTTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: LVLTLSQLHFLWTVGLYKEAYNS*KFLFPR
Trigger: TCTGGGGAAGAGAAATTTCCAGGAGTTGTACGCTTC...CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp AAGGTTACACTAGGTTGTCTCCCAAAGTGGTCCCCAGACATGCCTGTCACCCATCCTTCAAAGAAACTCTaGAGTTTATTTCCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: KVTLGCLPKWSPDMPVTHPSKKL*SLFPKG
Trigger: CCCCTTTGGAAATAAACTCCAGAGTTTCTTTGAAGG...ATGGGTGACAGGCATGTCTGGGGACCACTTTGGGAGACAACCTAGTGTAACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp CGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTCCTTCAAAGAAACTCTaGAGTTTATTTCCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: RTEPQAGGRHSTKVCAVSPSKKL*SLFPKG
Trigger: CCCCTTTGGAAATAAACTCCAGAGTTTCTTTGAAGG...AGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACATGGATTTTTGGACTTaGATTGTTGTGAGTCAACAG +
Preference number: 4 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHMDFWT*IVVSQQ
Trigger: CTGTTGACTCACAACAATCCAAGTCCAAAAATCCAT...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTGTACCATGGATTTTTaGACTTGGATTGTTGTGAGT +
Preference number: 4 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHCTMDF*TWIVVS
Trigger: ACTCACAACAATCCAAGTCCAAAAATCCATGGTACA...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp CCACAAAACAACACTCAGACAACAAGCACTCTACAGCATCCACCACGGTCTATACTGAAGGGTAAGGAGTaGAATCTGTTCTCGCTAGAC +
Preference number: 4 (lower is better)
Translates to: PQNNTQTTSTLQHPPRSILKGKE*NLFSLD
Trigger: GTCTAGCGAGAACAGATTCCACTCCTTACCCTTCAG...TATAGACCGTGGTGGATGCTGTAGAGTGCTTGTTGTCTGAGTGTTGTTTTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp ACACAGAAACTCAGCAAAGTACAGACATGCAGGAAATCAGCACTATATAGGAAACTGAGCCCTGGTGGCTaGCCAATCCAACGGATAACC +
Preference number: 4 (lower is better)
Translates to: TQKLSKVQTCRKSALYRKLSPGG*PIQRIT
Trigger: GGTTATCCGTTGGATTGGCCAGCCACCAGGGCTCAG...TTTCCTATATAGTGCTGATTTCCTGCATGTCTGTACTTTGCTGAGTTTCTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp AAGGTTACACTAGGTTGTCTCCCAAAGTGGTCCCCAGACATGCCTGTCACCCATACCTTTCAATTTGATTaGAAACAGGCTGCAAGGATG +
Preference number: 4 (lower is better)
Translates to: KVTLGCLPKWSPDMPVTHTFQFD*KQAARM
Trigger: CATCCTTGCAGCCTGTTTCCAATCAAATTGAAAGGT...ATGGGTGACAGGCATGTCTGGGGACCACTTTGGGAGACAACCTAGTGTAACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp AACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTACCTTTCAATTTGATTaGAAACAGGCTGCAAGGATG +
Preference number: 4 (lower is better)
Translates to: NHKLEEDTALRFVLSLPTTFQFD*KQAARM
Trigger: CATCCTTGCAGCCTGTTTCCAATCAAATTGAAAGGT...AGTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp CCACAAAACAACACTCAGACAACAAGCACTCTACAGCATCCACCACGGTCTATAAGATGCGGCACTGCCTaGGAGTGTCTTCAAGTAAAT +
Preference number: 4 (lower is better)
Translates to: PQNNTQTTSTLQHPPRSIRCGTA*ECLQVN
Trigger: ATTTACTTGAAGACACTCCCAGGCAGTGCCGCATCT...TATAGACCGTGGTGGATGCTGTAGAGTGCTTGTTGTCTGAGTGTTGTTTTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp TTGGTGCTAACTCTGAGCCAGCTTCACTTTCTCTGGACTGTGGGTCTGTATAAGAATGATTCAACCTCCTaGGATGAAGGTGAACCTGAG +
Preference number: 4 (lower is better)
Translates to: LVLTLSQLHFLWTVGLYKNDSTS*DEGEPE
Trigger: CTCAGGTTCACCTTCATCCCAGGAGGTTGAATCATT...CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp AACACATACTGCACTCCTTTGGGTCAGCTTGATAATAACCACCTCCCTGGAGAGCTCATGGTTGGACTCTaGTACATGCACATGTATGCA +
Preference number: 4 (lower is better)
Translates to: NTYCTPLGQLDNNHLPGELMVGL*YMHMYA
Trigger: TGCATACATGTGCATGTACCAGAGTCCAACCATGAG...CTCTCCAGGGAGGTGGTTATTATCAAGCTGACCCAAAGGAGTGCAGTATGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp CCACAAAACAACACTCAGACAACAAGCACTCTACAGCATCCACCACGGTCTATAGTACAGGCTCATGGTTaGACTCTGGTACATGCACAT +
Preference number: 4 (lower is better)
Translates to: PQNNTQTTSTLQHPPRSIVQAHG*TLVHAH
Trigger: ATGTGCATGTACCAGAGTCCAACCATGAGCCTGTAC...TATAGACCGTGGTGGATGCTGTAGAGTGCTTGTTGTCTGAGTGTTGTTTTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp AACACATACTGCACTCCTTTGGGTCAGCTTGATAATAACCACCTCCCTGGAGAGCTGTGTCACGCTATCTaGGATGATGTCATTGATGTG +
Preference number: 4 (lower is better)
Translates to: NTYCTPLGQLDNNHLPGELCHAI*DDVIDV
Trigger: CACATCAATGACATCATCCCAGATAGCGTGACACAG...CTCTCCAGGGAGGTGGTTATTATCAAGCTGACCCAAAGGAGTGCAGTATGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109626.4
CDS-3UTR TCA 90 bp CGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTTTTATTATGACTAGATaGACCTTTGTCACCTACACC +
Preference number: 4 (lower is better)
Translates to: RTEPQAGGRHSTKVCAVSFIMTR*TFVTYT
Trigger: GGTGTAGGTGACAAAGGTTCATCTAGTCATAATAAA...AGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp AACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTTTTATTATGACTAGATaGACCTTTGTCACCTACACC +
Preference number: 4 (lower is better)
Translates to: NHKLEEDTALRFVLSLPTFIMTR*TFVTYT
Trigger: GGTGTAGGTGACAAAGGTTCATCTAGTCATAATAAA...AGTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp CCACCCAGTCTAGGCACTCAGCTATATAAAAGTCTGTGCACAGTATACACACTTTCTACTTCCAGGGTCTaGGGTAGATCCTGTAACCTT +
Preference number: 4 (lower is better)
Translates to: PPSLGTQLYKSLCTVYTLSTSRV*GRSCNL
Trigger: AAGGTTACAGGATCTACCTCAGACCCTGGAAGTAGA...AAGTGTGTATACTGTGCACAGACTTTTATATAGCTGAGTGCCTAGACTGGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR TCA 90 bp AGCTACAGAGCAAGTGATGGAGAAAGAACCCAGGATTTTTGTCTCTTAGTCCTTGCATCTTTGTCAGGCTaGAGGGTAAGGAGTGGAATC +
Preference number: 4 (lower is better)
Translates to: SYRASDGERTQDFCLLVLASLSG*RVRSGI
Trigger: GATTCCACTCCTTACCCTTCAGCCTGACAAAGATGC...AAGGACTAAGAGACAAAAATCCTGGGTTCTTTCTCCATCACTTGCTCTGTAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR TCA 90 bp TTGGTGCTAACTCTGAGCCAGCTTCACTTTCTCTGGACTGTGGGTCTGTATAAGCTGGATAATCAAGCATaGTGGTGCCTCTGCAAATTT +
Preference number: 4 (lower is better)
Translates to: LVLTLSQLHFLWTVGLYKLDNQA*WCLCKF
Trigger: AAATTTGCAGAGGCACCATCATGCTTGATTATCCAG...CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp AGCTACAGAGCAAGTGATGGAGAAAGAACCCAGGATTTTTGTCTCTTAGTCCTTCTTGATCTTCCCAGCTaGGATGTCCGGATCGTCATA +
Preference number: 4 (lower is better)
Translates to: SYRASDGERTQDFCLLVLLDLPS*DVRIVI
Trigger: TATGACGATCCGGACATCTCAGCTGGGAAGATCAAG...AAGGACTAAGAGACAAAAATCCTGGGTTCTTTCTCCATCACTTGCTCTGTAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp CCACAAAACAACACTCAGACAACAAGCACTCTACAGCATCCACCACGGTCTATATGTATCTCCTGGGCCTaGAAAATCACTTTCCAATCC +
Preference number: 4 (lower is better)
Translates to: PQNNTQTTSTLQHPPRSICISWA*KITFQS
Trigger: GGATTGGAAAGTGATTTTGCAGGCCCAGGAGATACA...TATAGACCGTGGTGGATGCTGTAGAGTGCTTGTTGTCTGAGTGTTGTTTTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp ACACAGAAACTCAGCAAAGTACAGACATGCAGGAAATCAGCACTATATAGGAAAGGGGGAGGTTCAACCTaGATTGTATCTCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: TQKLSKVQTCRKSALYRKGGGST*IVSPGP
Trigger: AGGCCCAGGAGATACAATGCAGGTTGAACCTCCCCC...TTTCCTATATAGTGCTGATTTCCTGCATGTCTGTACTTTGCTGAGTTTCTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp AAGGTTACACTAGGTTGTCTCCCAAAGTGGTCCCCAGACATGCCTGTCACCCATTGTACTTTCAACACTTaGAAAACTACAGAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: KVTLGCLPKWSPDMPVTHCTFNT*KTTELY
Trigger: GTACAGCTCTGTAGTTTTGCAAGTGTTGAAAGTACA...ATGGGTGACAGGCATGTCTGGGGACCACTTTGGGAGACAACCTAGTGTAACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp CGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTTGTACTTTCAACACTTaGAAAACTACAGAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: RTEPQAGGRHSTKVCAVSCTFNT*KTTELY
Trigger: GTACAGCTCTGTAGTTTTGCAAGTGTTGAAAGTACA...AGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACATGATGTCATTGATGTaGAGGAGAATTGTACTTTCA +
Preference number: 4 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHMMSLM*RRIVLS
Trigger: TGAAAGTACAATTCTCCTGCACATCAATGACATCAT...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp TTAATGATACAGAAAGAGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTCAGTTTCACAAACAGTaGCTTCTTCAGGGCACACGT +
Preference number: 4 (lower is better)
Translates to: LMIQKEYMVHLFSQPRSTQFHKQ*LLQGTR
Trigger: ACGTGTGCCCTGAAGAAGGCACTGTTTGTGAAACTG...AGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACTCTTTCTGTATCATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp TTGGTGCTAACTCTGAGCCAGCTTCACTTTCTCTGGACTGTGGGTCTGTATAAGTGTAATGGCCCTGGATaGCTTTCTTCTTTCCAATCA +
Preference number: 4 (lower is better)
Translates to: LVLTLSQLHFLWTVGLYKCNGPG*LSSFQS
Trigger: TGATTGGAAAGAAGAAAGGCATCCAGGGCCATTACA...CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp CATAAATACTTGTTGGCAGTTACTCACCAGGCCAAGTACGGGGTTTTGCACTCCTGTAATGGCCCTGGATaGCTTTCTTCTTTCCAATCA +
Preference number: 4 (lower is better)
Translates to: HKYLLAVTHQAKYGVLHSCNGPG*LSSFQS
Trigger: TGATTGGAAAGAAGAAAGGCATCCAGGGCCATTACA...GGAGTGCAAAACCCCGTACTTGGCCTGGTGAGTAACTGCCAACAAGTATTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp AAGGTTTACAAAATTAAGGCCAAACTGGAGCATTCTGATAGCAAGGGATTGTTTCAAGTCCTCCACAGATaGGGCACTGCCTGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: KVYKIKAKLEHSDSKGLFQVLHR*GTAWEC
Trigger: ACACTCCCAGGCAGTGCCGCATCTGTGGAGGACTTG...AAACAATCCCTTGCTATCAGAATGCTCCAGTTTGGCCTTAATTTTGTAAACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp CCACCCAGTCTAGGCACTCAGCTATATAAAAGTCTGTGCACAGTATACACACTTCAGGTCTTACAGAACTaGTTGATCTTCCCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: PPSLGTQLYKSLCTVYTLQVLQN*LIFPAE
Trigger: CTCAGCTGGGAAGATCAAGCAGTTCTGTAAGACCTG...AAGTGTGTATACTGTGCACAGACTTTTATATAGCTGAGTGCCTAGACTGGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp AGCTACAGAGCAAGTGATGGAGAAAGAACCCAGGATTTTTGTCTCTTAGTCCTTGGTGAACCTGAGTGCTaGAGGTCTTACAGAACTGCT +
Preference number: 4 (lower is better)
Translates to: SYRASDGERTQDFCLLVLGEPEC*RSYRTA
Trigger: AGCAGTTCTGTAAGACCTGCAGCACTCAGGTTCACC...AAGGACTAAGAGACAAAAATCCTGGGTTCTTTCTCCATCACTTGCTCTGTAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp AGCTACAGAGCAAGTGATGGAGAAAGAACCCAGGATTTTTGTCTCTTAGTCCTTCTGGAATCCAAAGAGTaGAGGTCCTCCAGAGACATC +
Preference number: 4 (lower is better)
Translates to: SYRASDGERTQDFCLLVLLESKE*RSSRDI
Trigger: GATGTCTCTGGAGGACCTGCACTCTTTGGATTCCAG...AAGGACTAAGAGACAAAAATCCTGGGTTCTTTCTCCATCACTTGCTCTGTAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp CCACCCAGTCTAGGCACTCAGCTATATAAAAGTCTGTGCACAGTATACACACTTCCCACAGAACGGTCTTaGATGTACTGTCCTATACTC +
Preference number: 4 (lower is better)
Translates to: PPSLGTQLYKSLCTVYTLPTERS*MYCPIL
Trigger: GAGTATAGGACAGTACATCCAAGACCGTTCTGTGGG...AAGTGTGTATACTGTGCACAGACTTTTATATAGCTGAGTGCCTAGACTGGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp ACACAGAAACTCAGCAAAGTACAGACATGCAGGAAATCAGCACTATATAGGAAACTGCCCACGTCTACCTaGAGGCCTTTACTTAGTCGG +
Preference number: 4 (lower is better)
Translates to: TQKLSKVQTCRKSALYRKLPTST*RPLLSR
Trigger: CCGACTAAGTAAAGGCCTCCAGGTAGACGTGGGCAG...TTTCCTATATAGTGCTGATTTCCTGCATGTCTGTACTTTGCTGAGTTTCTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp CCACAAAACAACACTCAGACAACAAGCACTCTACAGCATCCACCACGGTCTATAGAAGCGTACAACTCCTaGAAATTTCTCTTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: PQNNTQTTSTLQHPPRSIEAYNS*KFLFPR
Trigger: TCTGGGGAAGAGAAATTTCCAGGAGTTGTACGCTTC...TATAGACCGTGGTGGATGCTGTAGAGTGCTTGTTGTCTGAGTGTTGTTTTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp AAGGTTACACTAGGTTGTCTCCCAAAGTGGTCCCCAGACATGCCTGTCACCCATATGGATTTTTGGACTTaGATTGTTGTGAGTCAACAG +
Preference number: 4 (lower is better)
Translates to: KVTLGCLPKWSPDMPVTHMDFWT*IVVSQQ
Trigger: CTGTTGACTCACAACAATCCAAGTCCAAAAATCCAT...ATGGGTGACAGGCATGTCTGGGGACCACTTTGGGAGACAACCTAGTGTAACCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp AACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTATGGATTTTTGGACTTaGATTGTTGTGAGTCAACAG +
Preference number: 4 (lower is better)
Translates to: NHKLEEDTALRFVLSLPTMDFWT*IVVSQQ
Trigger: CTGTTGACTCACAACAATCCAAGTCCAAAAATCCAT...AGTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp AAGGTTACACTAGGTTGTCTCCCAAAGTGGTCCCCAGACATGCCTGTCACCCATTGTACCATGGATTTTTaGACTTGGATTGTTGTGAGT +
Preference number: 4 (lower is better)
Translates to: KVTLGCLPKWSPDMPVTHCTMDF*TWIVVS
Trigger: ACTCACAACAATCCAAGTCCAAAAATCCATGGTACA...ATGGGTGACAGGCATGTCTGGGGACCACTTTGGGAGACAACCTAGTGTAACCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp AACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTTGTACCATGGATTTTTaGACTTGGATTGTTGTGAGT +
Preference number: 4 (lower is better)
Translates to: NHKLEEDTALRFVLSLPTCTMDF*TWIVVS
Trigger: ACTCACAACAATCCAAGTCCAAAAATCCATGGTACA...AGTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp AAGGTTTACAAAATTAAGGCCAAACTGGAGCATTCTGATAGCAAGGGATTGTTTCTGAGCCCTGGTGGCTaGCCAATCCAACGGATAACC +
Preference number: 4 (lower is better)
Translates to: KVYKIKAKLEHSDSKGLFLSPGG*PIQRIT
Trigger: GGTTATCCGTTGGATTGGCCAGCCACCAGGGCTCAG...AAACAATCCCTTGCTATCAGAATGCTCCAGTTTGGCCTTAATTTTGTAAACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp CGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTATAACTGCTGAATTGTaGGTACTCCAACTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: RTEPQAGGRHSTKVCAVSITAEL*VLQLSH
Trigger: ATGAGAAAGTTGGAGTACCCACAATTCAGCAGTTAT...AGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp CCACAAAACAACACTCAGACAACAAGCACTCTACAGCATCCACCACGGTCTATAAATGATTCAACCTCCTaGGATGAAGGTGAACCTGAG +
Preference number: 4 (lower is better)
Translates to: PQNNTQTTSTLQHPPRSINDSTS*DEGEPE
Trigger: CTCAGGTTCACCTTCATCCCAGGAGGTTGAATCATT...TATAGACCGTGGTGGATGCTGTAGAGTGCTTGTTGTCTGAGTGTTGTTTTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp TTGGTGCTAACTCTGAGCCAGCTTCACTTTCTCTGGACTGTGGGTCTGTATAAGAGTCAGGCAAGTCTTTaGGAAGTGATACTGGATGAT +
Preference number: 4 (lower is better)
Translates to: LVLTLSQLHFLWTVGLYKSQASL*EVILDD
Trigger: ATCATCCAGTATCACTTCCCAAAGACTTGCCTGACT...CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp AGCTACAGAGCAAGTGATGGAGAAAGAACCCAGGATTTTTGTCTCTTAGTCCTTGCAGGGCGTCACTTGTaGAATGTTGAAGCCATTCTG +
Preference number: 4 (lower is better)
Translates to: SYRASDGERTQDFCLLVLAGRHL*NVEAIL
Trigger: CAGAATGGCTTCAACATTCCACAAGTGACGCCCTGC...AAGGACTAAGAGACAAAAATCCTGGGTTCTTTCTCCATCACTTGCTCTGTAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR CAA 72 bp TGGATTAAAAATGTGCCTGGGCCCCTTTCCTCTCCCTaGTTCATCCTCCTGACTCTCCATACATATATACAG +
Preference number: 4 (lower is better)
Translates to: WIKNVPGPLSSP*FILLTLHTYIQ
Trigger: CTGTATATATGTATGGAGAGTCAGGAGGATGAACAAGGGAGAGGAAAGGGGCCCAGGCACATTTTTAATCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR TCA 90 bp TTAATGATACAGAAAGAGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTTTCTTCCCAGTAGGGTaGAGTAACTTTCTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LMIQKEYMVHLFSQPRSTFFPVG*SNFLLA
Trigger: AGCCAAGAGAAAGTTACTTCACCCTACTGGGAAGAA...AGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACTCTTTCTGTATCATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR TCA 90 bp CCACCCAGTCTAGGCACTCAGCTATATAAAAGTCTGTGCACAGTATACACACTTTTCTTCCCAGTAGGGTaGAGTAACTTTCTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: PPSLGTQLYKSLCTVYTLFFPVG*SNFLLA
Trigger: AGCCAAGAGAAAGTTACTTCACCCTACTGGGAAGAA...AAGTGTGTATACTGTGCACAGACTTTTATATAGCTGAGTGCCTAGACTGGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR TCA 90 bp CCACCCAGTCTAGGCACTCAGCTATATAAAAGTCTGTGCACAGTATACACACTTCTAATAAAGGTCCTCTaGAGCGTACAACTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: PPSLGTQLYKSLCTVYTLLIKVL*SVQLLE
Trigger: TTCCAGGAGTTGTACGCTTCAGAGGACCTTTATTAG...AAGTGTGTATACTGTGCACAGACTTTTATATAGCTGAGTGCCTAGACTGGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR TCA 90 bp AGCTACAGAGCAAGTGATGGAGAAAGAACCCAGGATTTTTGTCTCTTAGTCCTTTCTACTTCCAGGGTCTaGGGTAGATCCTGTAACCTT +
Preference number: 4 (lower is better)
Translates to: SYRASDGERTQDFCLLVLSTSRV*GRSCNL
Trigger: AAGGTTACAGGATCTACCTCAGACCCTGGAAGTAGA...AAGGACTAAGAGACAAAAATCCTGGGTTCTTTCTCCATCACTTGCTCTGTAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR TCA 90 bp TTGGTGCTAACTCTGAGCCAGCTTCACTTTCTCTGGACTGTGGGTCTGTATAAGATATTCTCAGAGGATTaGCTATCTCTGTCCTCAGTA +
Preference number: 4 (lower is better)
Translates to: LVLTLSQLHFLWTVGLYKIFSED*LSLSSV
Trigger: TACTGAGGACAGAGATAGTCAATCCTCTGAGAATAT...CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp CCACAAAACAACACTCAGACAACAAGCACTCTACAGCATCCACCACGGTCTATATTCAGAGGTAAAACCTaGTGCAGCCTCAACTTTTTC +
Preference number: 4 (lower is better)
Translates to: PQNNTQTTSTLQHPPRSIFRGKT*CSLNFF
Trigger: GAAAAAGTTGAGGCTGCATCAGGTTTTACCTCTGAA...TATAGACCGTGGTGGATGCTGTAGAGTGCTTGTTGTCTGAGTGTTGTTTTGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp CCACAAAACAACACTCAGACAACAAGCACTCTACAGCATCCACCACGGTCTATACTGGATAATCAAGCATaGTGGTGCCTCTGCAAATTT +
Preference number: 4 (lower is better)
Translates to: PQNNTQTTSTLQHPPRSILDNQA*WCLCKF
Trigger: AAATTTGCAGAGGCACCATCATGCTTGATTATCCAG...TATAGACCGTGGTGGATGCTGTAGAGTGCTTGTTGTCTGAGTGTTGTTTTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp CATAAATACTTGTTGGCAGTTACTCACCAGGCCAAGTACGGGGTTTTGCACTCCAGAACTGCATGCGGTTaGTCCAAGATTTTTAATCCA +
Preference number: 4 (lower is better)
Translates to: HKYLLAVTHQAKYGVLHSRTACG*SKIFNP
Trigger: TGGATTAAAAATCTTGGAGCAACCGCATGCAGTTCT...GGAGTGCAAAACCCCGTACTTGGCCTGGTGAGTAACTGCCAACAAGTATTTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp AAGGTTTACAAAATTAAGGCCAAACTGGAGCATTCTGATAGCAAGGGATTGTTTGTACTTTCACAGGACTaGCCACGTCTACCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: KVYKIKAKLEHSDSKGLFVLSQD*PRLPGG
Trigger: GCCTCCAGGTAGACGTGGGCAGTCCTGTGAAAGTAC...AAACAATCCCTTGCTATCAGAATGCTCCAGTTTGGCCTTAATTTTGTAAACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp AACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTATGATGTCATTGATGTaGAGGAGAATTGTACTTTCA +
Preference number: 4 (lower is better)
Translates to: NHKLEEDTALRFVLSLPTMMSLM*RRIVLS
Trigger: TGAAAGTACAATTCTCCTGCACATCAATGACATCAT...AGTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp CCACAAAACAACACTCAGACAACAAGCACTCTACAGCATCCACCACGGTCTATATGTAATGGCCCTGGATaGCTTTCTTCTTTCCAATCA +
Preference number: 4 (lower is better)
Translates to: PQNNTQTTSTLQHPPRSICNGPG*LSSFQS
Trigger: TGATTGGAAAGAAGAAAGGCATCCAGGGCCATTACA...TATAGACCGTGGTGGATGCTGTAGAGTGCTTGTTGTCTGAGTGTTGTTTTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp AACACATACTGCACTCCTTTGGGTCAGCTTGATAATAACCACCTCCCTGGAGAGAGTGGCTCGTTTCTATaGAGAGAACAGCAAATAACT +
Preference number: 4 (lower is better)
Translates to: NTYCTPLGQLDNNHLPGESGSFL*REQQIT
Trigger: AGTTATTTGCTGTTCTCTGCATAGAAACGAGCCACT...CTCTCCAGGGAGGTGGTTATTATCAAGCTGACCCAAAGGAGTGCAGTATGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp TTGGTGCTAACTCTGAGCCAGCTTCACTTTCTCTGGACTGTGGGTCTGTATAAGAGTGGCTCGTTTCTATaGAGAGAACAGCAAATAACT +
Preference number: 4 (lower is better)
Translates to: LVLTLSQLHFLWTVGLYKSGSFL*REQQIT
Trigger: AGTTATTTGCTGTTCTCTGCATAGAAACGAGCCACT...CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp ACACAGAAACTCAGCAAAGTACAGACATGCAGGAAATCAGCACTATATAGGAAACATCGCAAAGAAGTCTaGGCGCACAGCCTTGAATCC +
Preference number: 4 (lower is better)
Translates to: TQKLSKVQTCRKSALYRKHRKEV*AHSLES
Trigger: GGATTCAAGGCTGTGCGCGCAGACTTCTTTGCGATG...TTTCCTATATAGTGCTGATTTCCTGCATGTCTGTACTTTGCTGAGTTTCTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp AACACATACTGCACTCCTTTGGGTCAGCTTGATAATAACCACCTCCCTGGAGAGTTTTCTTGCCTTTTGTaGAAGGAACTCTTGAATGCC +
Preference number: 4 (lower is better)
Translates to: NTYCTPLGQLDNNHLPGEFSCLL*KELLNA
Trigger: GGCATTCAAGAGTTCCTTCCACAAAAGGCAAGAAAA...CTCTCCAGGGAGGTGGTTATTATCAAGCTGACCCAAAGGAGTGCAGTATGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp CCACCCAGTCTAGGCACTCAGCTATATAAAAGTCTGTGCACAGTATACACACTTGAAGCGTACAACTCCTaGAAATTTCTCTTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: PPSLGTQLYKSLCTVYTLEAYNS*KFLFPR
Trigger: TCTGGGGAAGAGAAATTTCCAGGAGTTGTACGCTTC...AAGTGTGTATACTGTGCACAGACTTTTATATAGCTGAGTGCCTAGACTGGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp GCCTATAAACAAAGACCTCACCATTCCTTAGTTAAACCTTTCAAAATCACACTACTGAGCCCTGGTGGCTaGCCAATCCAACGGATAACC +
Preference number: 4 (lower is better)
Translates to: AYKQRPHHSLVKPFKITLLSPGG*PIQRIT
Trigger: GGTTATCCGTTGGATTGGCCAGCCACCAGGGCTCAG...TAGTGTGATTTTGAAAGGTTTAACTAAGGAATGGTGAGGTCTTTGTTTATAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp TTGGTGCTAACTCTGAGCCAGCTTCACTTTCTCTGGACTGTGGGTCTGTATAAGACCTTTCAATTTGATTaGAAACAGGCTGCAAGGATG +
Preference number: 4 (lower is better)
Translates to: LVLTLSQLHFLWTVGLYKTFQFD*KQAARM
Trigger: CATCCTTGCAGCCTGTTTCCAATCAAATTGAAAGGT...CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp AGCTACAGAGCAAGTGATGGAGAAAGAACCCAGGATTTTTGTCTCTTAGTCCTTAGATGCGGCACTGCCTaGGAGTGTCTTCAAGTAAAT +
Preference number: 4 (lower is better)
Translates to: SYRASDGERTQDFCLLVLRCGTA*ECLQVN
Trigger: ATTTACTTGAAGACACTCCCAGGCAGTGCCGCATCT...AAGGACTAAGAGACAAAAATCCTGGGTTCTTTCTCCATCACTTGCTCTGTAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp CCACAAAACAACACTCAGACAACAAGCACTCTACAGCATCCACCACGGTCTATAAGTCAGGCAAGTCTTTaGGAAGTGATACTGGATGAT +
Preference number: 4 (lower is better)
Translates to: PQNNTQTTSTLQHPPRSISQASL*EVILDD
Trigger: ATCATCCAGTATCACTTCCCAAAGACTTGCCTGACT...TATAGACCGTGGTGGATGCTGTAGAGTGCTTGTTGTCTGAGTGTTGTTTTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
3UTR CAA 72 bp TCAGATGTATCAGGCATGGCCTGGAACCCTAACAATTaGTACCGCTTATCCAACTACATATCCAACCCTTTC +
Preference number: 4 (lower is better)
Translates to: SDVSGMAWNPNN*YRLSNYISNPF
Trigger: GAAAGGGTTGGATATGTAGTTGGATAAGCGGTACAAATTGTTAGGGTTCCAGGCCATGCCTGATACATCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR TCA 90 bp AAGGTTTACAAAATTAAGGCCAAACTGGAGCATTCTGATAGCAAGGGATTGTTTTGTGGAAGGAACTCTTaGATGCCCCACAGAACGGTC +
Preference number: 4 (lower is better)
Translates to: KVYKIKAKLEHSDSKGLFCGRNS*MPHRTV
Trigger: GACCGTTCTGTGGGGCATTCAAGAGTTCCTTCCACA...AAACAATCCCTTGCTATCAGAATGCTCCAGTTTGGCCTTAATTTTGTAAACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR TCA 90 bp ACACAGAAACTCAGCAAAGTACAGACATGCAGGAAATCAGCACTATATAGGAAACCATCCGTGAAACCTTaGCCACGACCTTCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: TQKLSKVQTCRKSALYRKPSVKP*PRPSSN
Trigger: ATTGGAAGAAGGTCGTGGTCAAGGTTTCACGGATGG...TTTCCTATATAGTGCTGATTTCCTGCATGTCTGTACTTTGCTGAGTTTCTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp ACACAGAAACTCAGCAAAGTACAGACATGCAGGAAATCAGCACTATATAGGAAAGATATACCCCATCCGTaGAACCTTGACCACGACCTT +
Preference number: 4 (lower is better)
Translates to: TQKLSKVQTCRKSALYRKDIPHP*NLDHDL
Trigger: AAGGTCGTGGTCAAGGTTTCACGGATGGGGTATATC...TTTCCTATATAGTGCTGATTTCCTGCATGTCTGTACTTTGCTGAGTTTCTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp CATAAATACTTGTTGGCAGTTACTCACCAGGCCAAGTACGGGGTTTTGCACTCCTTTATTATGACTAGATaGACCTTTGTCACCTACACC +
Preference number: 4 (lower is better)
Translates to: HKYLLAVTHQAKYGVLHSFIMTR*TFVTYT
Trigger: GGTGTAGGTGACAAAGGTTCATCTAGTCATAATAAA...GGAGTGCAAAACCCCGTACTTGGCCTGGTGAGTAACTGCCAACAAGTATTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR TCA 90 bp CCACAAAACAACACTCAGACAACAAGCACTCTACAGCATCCACCACGGTCTATAATATTCTCAGAGGATTaGCTATCTCTGTCCTCAGTA +
Preference number: 4 (lower is better)
Translates to: PQNNTQTTSTLQHPPRSIIFSED*LSLSSV
Trigger: TACTGAGGACAGAGATAGTCAATCCTCTGAGAATAT...TATAGACCGTGGTGGATGCTGTAGAGTGCTTGTTGTCTGAGTGTTGTTTTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp TTGGTGCTAACTCTGAGCCAGCTTCACTTTCTCTGGACTGTGGGTCTGTATAAGTGTACTTTCAACACTTaGAAAACTACAGAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: LVLTLSQLHFLWTVGLYKCTFNT*KTTELY
Trigger: GTACAGCTCTGTAGTTTTGCAAGTGTTGAAAGTACA...CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp AACACATACTGCACTCCTTTGGGTCAGCTTGATAATAACCACCTCCCTGGAGAGTGTACTTTCAACACTTaGAAAACTACAGAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: NTYCTPLGQLDNNHLPGECTFNT*KTTELY
Trigger: GTACAGCTCTGTAGTTTTGCAAGTGTTGAAAGTACA...CTCTCCAGGGAGGTGGTTATTATCAAGCTGACCCAAAGGAGTGCAGTATGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp TTAATGATACAGAAAGAGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTTGTAATGGCCCTGGATaGCTTTCTTCTTTCCAATCA +
Preference number: 4 (lower is better)
Translates to: LMIQKEYMVHLFSQPRSTCNGPG*LSSFQS
Trigger: TGATTGGAAAGAAGAAAGGCATCCAGGGCCATTACA...AGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACTCTTTCTGTATCATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp CCACAAAACAACACTCAGACAACAAGCACTCTACAGCATCCACCACGGTCTATAAGTGGCTCGTTTCTATaGAGAGAACAGCAAATAACT +
Preference number: 4 (lower is better)
Translates to: PQNNTQTTSTLQHPPRSISGSFL*REQQIT
Trigger: AGTTATTTGCTGTTCTCTGCATAGAAACGAGCCACT...TATAGACCGTGGTGGATGCTGTAGAGTGCTTGTTGTCTGAGTGTTGTTTTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp CCACAAAACAACACTCAGACAACAAGCACTCTACAGCATCCACCACGGTCTATATTTTCTTGCCTTTTGTaGAAGGAACTCTTGAATGCC +
Preference number: 4 (lower is better)
Translates to: PQNNTQTTSTLQHPPRSIFSCLL*KELLNA
Trigger: GGCATTCAAGAGTTCCTTCCACAAAAGGCAAGAAAA...TATAGACCGTGGTGGATGCTGTAGAGTGCTTGTTGTCTGAGTGTTGTTTTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp CATAAATACTTGTTGGCAGTTACTCACCAGGCCAAGTACGGGGTTTTGCACTCCATGGATTTTTGGACTTaGATTGTTGTGAGTCAACAG +
Preference number: 4 (lower is better)
Translates to: HKYLLAVTHQAKYGVLHSMDFWT*IVVSQQ
Trigger: CTGTTGACTCACAACAATCCAAGTCCAAAAATCCAT...GGAGTGCAAAACCCCGTACTTGGCCTGGTGAGTAACTGCCAACAAGTATTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp TTGGTGCTAACTCTGAGCCAGCTTCACTTTCTCTGGACTGTGGGTCTGTATAAGTGTACCATGGATTTTTaGACTTGGATTGTTGTGAGT +
Preference number: 4 (lower is better)
Translates to: LVLTLSQLHFLWTVGLYKCTMDF*TWIVVS
Trigger: ACTCACAACAATCCAAGTCCAAAAATCCATGGTACA...CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp GCCTATAAACAAAGACCTCACCATTCCTTAGTTAAACCTTTCAAAATCACACTAAAGGGTGGACTCTCCTaGACAGGTGTGCTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: AYKQRPHHSLVKPFKITLKGGLS*TGVLFS
Trigger: GCTGAACAGCACACCTGTCCAGGAGAGTCCACCCTT...TAGTGTGATTTTGAAAGGTTTAACTAAGGAATGGTGAGGTCTTTGTTTATAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp AACACATACTGCACTCCTTTGGGTCAGCTTGATAATAACCACCTCCCTGGAGAGATAACTGCTGAATTGTaGGTACTCCAACTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: NTYCTPLGQLDNNHLPGEITAEL*VLQLSH
Trigger: ATGAGAAAGTTGGAGTACCCACAATTCAGCAGTTAT...CTCTCCAGGGAGGTGGTTATTATCAAGCTGACCCAAAGGAGTGCAGTATGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp CCACCCAGTCTAGGCACTCAGCTATATAAAAGTCTGTGCACAGTATACACACTTAGTCAGGCAAGTCTTTaGGAAGTGATACTGGATGAT +
Preference number: 4 (lower is better)
Translates to: PPSLGTQLYKSLCTVYTLSQASL*EVILDD
Trigger: ATCATCCAGTATCACTTCCCAAAGACTTGCCTGACT...AAGTGTGTATACTGTGCACAGACTTTTATATAGCTGAGTGCCTAGACTGGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp AGCTACAGAGCAAGTGATGGAGAAAGAACCCAGGATTTTTGTCTCTTAGTCCTTATTTGTACAGGCTCATaGTTGGACTCTGGTACATGC +
Preference number: 4 (lower is better)
Translates to: SYRASDGERTQDFCLLVLICTGS*LDSGTC
Trigger: GCATGTACCAGAGTCCAACCATGAGCCTGTACAAAT...AAGGACTAAGAGACAAAAATCCTGGGTTCTTTCTCCATCACTTGCTCTGTAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR TCA 90 bp AAGGTTTACAAAATTAAGGCCAAACTGGAGCATTCTGATAGCAAGGGATTGTTTGATATACCCCATCCGTaGAACCTTGACCACGACCTT +
Preference number: 4 (lower is better)
Translates to: KVYKIKAKLEHSDSKGLFDIPHP*NLDHDL
Trigger: AAGGTCGTGGTCAAGGTTTCACGGATGGGGTATATC...AAACAATCCCTTGCTATCAGAATGCTCCAGTTTGGCCTTAATTTTGTAAACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR TCA 90 bp ACACAGAAACTCAGCAAAGTACAGACATGCAGGAAATCAGCACTATATAGGAAATCTACTTCCAGGGTCTaGGGTAGATCCTGTAACCTT +
Preference number: 4 (lower is better)
Translates to: TQKLSKVQTCRKSALYRKSTSRV*GRSCNL
Trigger: AAGGTTACAGGATCTACCTCAGACCCTGGAAGTAGA...TTTCCTATATAGTGCTGATTTCCTGCATGTCTGTACTTTGCTGAGTTTCTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp ACACAGAAACTCAGCAAAGTACAGACATGCAGGAAATCAGCACTATATAGGAAAAGAGAGAGTGGACTATaGGCCATGCTGCCATTAGTA +
Preference number: 4 (lower is better)
Translates to: TQKLSKVQTCRKSALYRKRESGL*AMLPLV
Trigger: TACTAATGGCAGCATGGCTCATAGTCCACTCTCTCT...TTTCCTATATAGTGCTGATTTCCTGCATGTCTGTACTTTGCTGAGTTTCTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp AAGGTTTACAAAATTAAGGCCAAACTGGAGCATTCTGATAGCAAGGGATTGTTTGAAGGAACTCTTGAATaGCCCACAGAACGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: KVYKIKAKLEHSDSKGLFEGTLE*PTERSW
Trigger: CCAAGACCGTTCTGTGGGGCATTCAAGAGTTCCTTC...AAACAATCCCTTGCTATCAGAATGCTCCAGTTTGGCCTTAATTTTGTAAACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp ACACAGAAACTCAGCAAAGTACAGACATGCAGGAAATCAGCACTATATAGGAAATCCATCTGTACAGCCTaGGCATTCATCTTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: TQKLSKVQTCRKSALYRKSICTA*AFIFQF
Trigger: GAACTGGAAGATGAATGCGCAGGCTGTACAGATGGA...TTTCCTATATAGTGCTGATTTCCTGCATGTCTGTACTTTGCTGAGTTTCTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp ACACAGAAACTCAGCAAAGTACAGACATGCAGGAAATCAGCACTATATAGGAAACAGGTCTTACAGAACTaGTTGATCTTCCCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: TQKLSKVQTCRKSALYRKQVLQN*LIFPAE
Trigger: CTCAGCTGGGAAGATCAAGCAGTTCTGTAAGACCTG...TTTCCTATATAGTGCTGATTTCCTGCATGTCTGTACTTTGCTGAGTTTCTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp AAGGTTTACAAAATTAAGGCCAAACTGGAGCATTCTGATAGCAAGGGATTGTTTCTGGAATCCAAAGAGTaGAGGTCCTCCAGAGACATC +
Preference number: 4 (lower is better)
Translates to: KVYKIKAKLEHSDSKGLFLESKE*RSSRDI
Trigger: GATGTCTCTGGAGGACCTGCACTCTTTGGATTCCAG...AAACAATCCCTTGCTATCAGAATGCTCCAGTTTGGCCTTAATTTTGTAAACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp ACACAGAAACTCAGCAAAGTACAGACATGCAGGAAATCAGCACTATATAGGAAACCCACAGAACGGTCTTaGATGTACTGTCCTATACTC +
Preference number: 4 (lower is better)
Translates to: TQKLSKVQTCRKSALYRKPTERS*MYCPIL
Trigger: GAGTATAGGACAGTACATCCAAGACCGTTCTGTGGG...TTTCCTATATAGTGCTGATTTCCTGCATGTCTGTACTTTGCTGAGTTTCTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp AAGGTTTACAAAATTAAGGCCAAACTGGAGCATTCTGATAGCAAGGGATTGTTTGCAGGGCGTCACTTGTaGAATGTTGAAGCCATTCTG +
Preference number: 4 (lower is better)
Translates to: KVYKIKAKLEHSDSKGLFAGRHL*NVEAIL
Trigger: CAGAATGGCTTCAACATTCCACAAGTGACGCCCTGC...AAACAATCCCTTGCTATCAGAATGCTCCAGTTTGGCCTTAATTTTGTAAACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
3UTR CAA 72 bp ACACAAAAGCAATTTGTTTGGAAACACAGGAATCCTTaGCTGAAGGGCCATCATCAAAAGAGACACCCATTG +
Preference number: 4 (lower is better)
Translates to: TQKQFVWKHRNP*LKGHHQKRHPL
Trigger: CAATGGGTGTCTCTTTTGATGATGGCCCTTCAGCAAAGGATTCCTGTGTTTCCAAACAAATTGCTTTTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp ACACAGAAACTCAGCAAAGTACAGACATGCAGGAAATCAGCACTATATAGGAAATTCTTCCCAGTAGGGTaGAGTAACTTTCTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: TQKLSKVQTCRKSALYRKFFPVG*SNFLLA
Trigger: AGCCAAGAGAAAGTTACTTCACCCTACTGGGAAGAA...TTTCCTATATAGTGCTGATTTCCTGCATGTCTGTACTTTGCTGAGTTTCTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp AAGGTTTACAAAATTAAGGCCAAACTGGAGCATTCTGATAGCAAGGGATTGTTTAGACATCTCTGTAAGTaGCTTTGCAGGGTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: KVYKIKAKLEHSDSKGLFRHLCK*LCRVFC
Trigger: GCAGAAGACCCTGCAAAGTCACTTACAGAGATGTCT...AAACAATCCCTTGCTATCAGAATGCTCCAGTTTGGCCTTAATTTTGTAAACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR TCA 90 bp AGCTACAGAGCAAGTGATGGAGAAAGAACCCAGGATTTTTGTCTCTTAGTCCTTTTACACCTTTCAATTTaGTTGGAAACAGGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: SYRASDGERTQDFCLLVLLHLSI*LETGCK
Trigger: CTTGCAGCCTGTTTCCAATCAAATTGAAAGGTGTAA...AAGGACTAAGAGACAAAAATCCTGGGTTCTTTCTCCATCACTTGCTCTGTAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR TCA 90 bp ACACAGAAACTCAGCAAAGTACAGACATGCAGGAAATCAGCACTATATAGGAAATCTTACAGAACTGCTTaGTCTTCCCAGCTGAGATGT +
Preference number: 4 (lower is better)
Translates to: TQKLSKVQTCRKSALYRKSYRTA*SSQLRC
Trigger: ACATCTCAGCTGGGAAGATCAAGCAGTTCTGTAAGA...TTTCCTATATAGTGCTGATTTCCTGCATGTCTGTACTTTGCTGAGTTTCTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp ACACAGAAACTCAGCAAAGTACAGACATGCAGGAAATCAGCACTATATAGGAAATGTATCTCCTGGGCCTaGAAAATCACTTTCCAATCC +
Preference number: 4 (lower is better)
Translates to: TQKLSKVQTCRKSALYRKCISWA*KITFQS
Trigger: GGATTGGAAAGTGATTTTGCAGGCCCAGGAGATACA...TTTCCTATATAGTGCTGATTTCCTGCATGTCTGTACTTTGCTGAGTTTCTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp AGCTACAGAGCAAGTGATGGAGAAAGAACCCAGGATTTTTGTCTCTTAGTCCTTTTTTCTTGCCTTTTGTaGAAGGAACTCTTGAATGCC +
Preference number: 4 (lower is better)
Translates to: SYRASDGERTQDFCLLVLFSCLL*KELLNA
Trigger: GGCATTCAAGAGTTCCTTCCACAAAAGGCAAGAAAA...AAGGACTAAGAGACAAAAATCCTGGGTTCTTTCTCCATCACTTGCTCTGTAGCT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp ACACAGAAACTCAGCAAAGTACAGACATGCAGGAAATCAGCACTATATAGGAAAGAAGCGTACAACTCCTaGAAATTTCTCTTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: TQKLSKVQTCRKSALYRKEAYNS*KFLFPR
Trigger: TCTGGGGAAGAGAAATTTCCAGGAGTTGTACGCTTC...TTTCCTATATAGTGCTGATTTCCTGCATGTCTGTACTTTGCTGAGTTTCTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp TTAATGATACAGAAAGAGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTATGGATTTTTGGACTTaGATTGTTGTGAGTCAACAG +
Preference number: 4 (lower is better)
Translates to: LMIQKEYMVHLFSQPRSTMDFWT*IVVSQQ
Trigger: CTGTTGACTCACAACAATCCAAGTCCAAAAATCCAT...AGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACTCTTTCTGTATCATTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp AAGGTTTACAAAATTAAGGCCAAACTGGAGCATTCTGATAGCAAGGGATTGTTTCTGAAGGGTAAGGAGTaGAATCTGTTCTCGCTAGAC +
Preference number: 4 (lower is better)
Translates to: KVYKIKAKLEHSDSKGLFLKGKE*NLFSLD
Trigger: GTCTAGCGAGAACAGATTCCACTCCTTACCCTTCAG...AAACAATCCCTTGCTATCAGAATGCTCCAGTTTGGCCTTAATTTTGTAAACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp CCACCCAGTCTAGGCACTCAGCTATATAAAAGTCTGTGCACAGTATACACACTTATAACTGCTGAATTGTaGGTACTCCAACTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: PPSLGTQLYKSLCTVYTLITAEL*VLQLSH
Trigger: ATGAGAAAGTTGGAGTACCCACAATTCAGCAGTTAT...AAGTGTGTATACTGTGCACAGACTTTTATATAGCTGAGTGCCTAGACTGGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp GCCTATAAACAAAGACCTCACCATTCCTTAGTTAAACCTTTCAAAATCACACTACAGTTTCACAAACAGTaGCTTCTTCAGGGCACACGT +
Preference number: 4 (lower is better)
Translates to: AYKQRPHHSLVKPFKITLQFHKQ*LLQGTR
Trigger: ACGTGTGCCCTGAAGAAGGCACTGTTTGTGAAACTG...TAGTGTGATTTTGAAAGGTTTAACTAAGGAATGGTGAGGTCTTTGTTTATAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp GCCTATAAACAAAGACCTCACCATTCCTTAGTTAAACCTTTCAAAATCACACTAAGATGCGGCACTGCCTaGGAGTGTCTTCAAGTAAAT +
Preference number: 4 (lower is better)
Translates to: AYKQRPHHSLVKPFKITLRCGTA*ECLQVN
Trigger: ATTTACTTGAAGACACTCCCAGGCAGTGCCGCATCT...TAGTGTGATTTTGAAAGGTTTAACTAAGGAATGGTGAGGTCTTTGTTTATAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp ACACAGAAACTCAGCAAAGTACAGACATGCAGGAAATCAGCACTATATAGGAAAAGTCAGGCAAGTCTTTaGGAAGTGATACTGGATGAT +
Preference number: 4 (lower is better)
Translates to: TQKLSKVQTCRKSALYRKSQASL*EVILDD
Trigger: ATCATCCAGTATCACTTCCCAAAGACTTGCCTGACT...TTTCCTATATAGTGCTGATTTCCTGCATGTCTGTACTTTGCTGAGTTTCTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp GCCTATAAACAAAGACCTCACCATTCCTTAGTTAAACCTTTCAAAATCACACTATTCTTCCCAGTAGGGTaGAGTAACTTTCTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: AYKQRPHHSLVKPFKITLFFPVG*SNFLLA
Trigger: AGCCAAGAGAAAGTTACTTCACCCTACTGGGAAGAA...TAGTGTGATTTTGAAAGGTTTAACTAAGGAATGGTGAGGTCTTTGTTTATAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR TCA 90 bp ACACAGAAACTCAGCAAAGTACAGACATGCAGGAAATCAGCACTATATAGGAAAATATTCTCAGAGGATTaGCTATCTCTGTCCTCAGTA +
Preference number: 4 (lower is better)
Translates to: TQKLSKVQTCRKSALYRKIFSED*LSLSSV
Trigger: TACTGAGGACAGAGATAGTCAATCCTCTGAGAATAT...TTTCCTATATAGTGCTGATTTCCTGCATGTCTGTACTTTGCTGAGTTTCTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp GCCTATAAACAAAGACCTCACCATTCCTTAGTTAAACCTTTCAAAATCACACTATCTTACAGAACTGCTTaGTCTTCCCAGCTGAGATGT +
Preference number: 4 (lower is better)
Translates to: AYKQRPHHSLVKPFKITLSYRTA*SSQLRC
Trigger: ACATCTCAGCTGGGAAGATCAAGCAGTTCTGTAAGA...TAGTGTGATTTTGAAAGGTTTAACTAAGGAATGGTGAGGTCTTTGTTTATAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp ACACAGAAACTCAGCAAAGTACAGACATGCAGGAAATCAGCACTATATAGGAAAAGAACTGCATGCGGTTaGTCCAAGATTTTTAATCCA +
Preference number: 4 (lower is better)
Translates to: TQKLSKVQTCRKSALYRKRTACG*SKIFNP
Trigger: TGGATTAAAAATCTTGGAGCAACCGCATGCAGTTCT...TTTCCTATATAGTGCTGATTTCCTGCATGTCTGTACTTTGCTGAGTTTCTGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp AGCTACAGAGCAAGTGATGGAGAAAGAACCCAGGATTTTTGTCTCTTAGTCCTTATGATGTCATTGATGTaGAGGAGAATTGTACTTTCA +
Preference number: 4 (lower is better)
Translates to: SYRASDGERTQDFCLLVLMMSLM*RRIVLS
Trigger: TGAAAGTACAATTCTCCTGCACATCAATGACATCAT...AAGGACTAAGAGACAAAAATCCTGGGTTCTTTCTCCATCACTTGCTCTGTAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp GCCTATAAACAAAGACCTCACCATTCCTTAGTTAAACCTTTCAAAATCACACTACTGCATTGTATCTCCTaGGCCTGCAAAATCACTTTC +
Preference number: 4 (lower is better)
Translates to: AYKQRPHHSLVKPFKITLLHCIS*ACKITF
Trigger: GAAAGTGATTTTGCAGGCCCAGGAGATACAATGCAG...TAGTGTGATTTTGAAAGGTTTAACTAAGGAATGGTGAGGTCTTTGTTTATAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp ACACAGAAACTCAGCAAAGTACAGACATGCAGGAAATCAGCACTATATAGGAAAACCTTTCAATTTGATTaGAAACAGGCTGCAAGGATG +
Preference number: 4 (lower is better)
Translates to: TQKLSKVQTCRKSALYRKTFQFD*KQAARM
Trigger: CATCCTTGCAGCCTGTTTCCAATCAAATTGAAAGGT...TTTCCTATATAGTGCTGATTTCCTGCATGTCTGTACTTTGCTGAGTTTCTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CCA 90 bp GCCTATAAACAAAGACCTCACCATTCCTTAGTTAAACCTTTCAAAATCACACTAAATGATTCAACCTCCTaGGATGAAGGTGAACCTGAG +
Preference number: 4 (lower is better)
Translates to: AYKQRPHHSLVKPFKITLNDSTS*DEGEPE
Trigger: CTCAGGTTCACCTTCATCCCAGGAGGTTGAATCATT...TAGTGTGATTTTGAAAGGTTTAACTAAGGAATGGTGAGGTCTTTGTTTATAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp ACACAGAAACTCAGCAAAGTACAGACATGCAGGAAATCAGCACTATATAGGAAAATAACTGCTGAATTGTaGGTACTCCAACTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: TQKLSKVQTCRKSALYRKITAEL*VLQLSH
Trigger: ATGAGAAAGTTGGAGTACCCACAATTCAGCAGTTAT...TTTCCTATATAGTGCTGATTTCCTGCATGTCTGTACTTTGCTGAGTTTCTGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR TCA 90 bp AAGGTTTACAAAATTAAGGCCAAACTGGAGCATTCTGATAGCAAGGGATTGTTTTTTATTATGACTAGATaGACCTTTGTCACCTACACC +
Preference number: 4 (lower is better)
Translates to: KVYKIKAKLEHSDSKGLFFIMTR*TFVTYT
Trigger: GGTGTAGGTGACAAAGGTTCATCTAGTCATAATAAA...AAACAATCCCTTGCTATCAGAATGCTCCAGTTTGGCCTTAATTTTGTAAACCTT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR GCA 90 bp ACACAGAAACTCAGCAAAGTACAGACATGCAGGAAATCAGCACTATATAGGAAAATGATGTCATTGATGTaGAGGAGAATTGTACTTTCA +
Preference number: 4 (lower is better)
Translates to: TQKLSKVQTCRKSALYRKMMSLM*RRIVLS
Trigger: TGAAAGTACAATTCTCCTGCACATCAATGACATCAT...TTTCCTATATAGTGCTGATTTCCTGCATGTCTGTACTTTGCTGAGTTTCTGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR GCA 90 bp GCCTATAAACAAAGACCTCACCATTCCTTAGTTAAACCTTTCAAAATCACACTAAGTGGCTCGTTTCTATaGAGAGAACAGCAAATAACT +
Preference number: 4 (lower is better)
Translates to: AYKQRPHHSLVKPFKITLSGSFL*REQQIT
Trigger: AGTTATTTGCTGTTCTCTGCATAGAAACGAGCCACT...TAGTGTGATTTTGAAAGGTTTAACTAAGGAATGGTGAGGTCTTTGTTTATAGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CCA 90 bp GCCTATAAACAAAGACCTCACCATTCCTTAGTTAAACCTTTCAAAATCACACTATTTTCTTGCCTTTTGTaGAAGGAACTCTTGAATGCC +
Preference number: 4 (lower is better)
Translates to: AYKQRPHHSLVKPFKITLFSCLL*KELLNA
Trigger: GGCATTCAAGAGTTCCTTCCACAAAAGGCAAGAAAA...TAGTGTGATTTTGAAAGGTTTAACTAAGGAATGGTGAGGTCTTTGTTTATAGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS CCA 90 bp CAGCCAGTGAGCCCACCTCTAGCCCGTGTGCATTCCCAGAAGAGATaGGCAAGGGTGGACTCTCCTGGACAGGTGTGCTGTTCAGCTCCC +
Preference number: 5 (lower is better)
Translates to: QPVSPPLARVHSQKR*ARVDSPGQVCCSAP
Trigger: GGGAGCTGAACAGCACACCTGTCCAGGAGAGTCCACCCTTGCCCATCTCTTCTGGGAATGCACACGGGCTAGAGGTGGGCTCACTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS CCA 90 bp AGCCCGTGTGCATTCCCAGAAGAGATGGGCAAGGGTGGACTCTCCTaGACAGGTGTGCTGTTCAGCTCCCCCATCACAGACTGCACTGAC +
Preference number: 5 (lower is better)
Translates to: SPCAFPEEMGKGGLS*TGVLFSSPITDCTD
Trigger: GTCAGTGCAGTCTGTGATGGGGGAGCTGAACAGCACACCTGTCCAGGAGAGTCCACCCTTGCCCATCTCTTCTGGGAATGCACACGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS GCA 90 bp CATTCCCAGAAGAGATGGGCAAGGGTGGACTCTCCTGGACAGGTGTaGTGTTCAGCTCCCCCATCACAGACTGCACTGACAGAGAGAGTG +
Preference number: 5 (lower is better)
Translates to: HSQKRWARVDSPGQV*CSAPPSQTALTERV
Trigger: CACTCTCTCTGTCAGTGCAGTCTGTGATGGGGGAGCTGAACAGCACACCTGTCCAGGAGAGTCCACCCTTGCCCATCTCTTCTGGGAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp CCGGCAATGGGTGCCGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGCCCATCCGTGAAACCTaGACCACGACCTTCTTCCAA +
Preference number: 5 (lower is better)
Translates to: PAMGAGQNHKLEEDTALRPIRET*TTTFFQ
Trigger: TTGGAAGAAGGTCGTGGTCAAGGTTTCACGGATGGG...CCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp CCGGCAATGGGTGCCGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGCCCCACAGAACGGTCTaGGATGTACTGTCCTATACT +
Preference number: 5 (lower is better)
Translates to: PAMGAGQNHKLEEDTALRPHRTV*DVLSYT
Trigger: AGTATAGGACAGTACATCCAAGACCGTTCTGTGGGG...CCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp CCGGCAATGGGTGCCGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTGTACAGGCTCATGGTaGGACTCTGGTACATGCACA +
Preference number: 5 (lower is better)
Translates to: PAMGAGQNHKLEEDTALRCTGSW*DSGTCT
Trigger: TGTGCATGTACCAGAGTCCAACCATGAGCCTGTACA...CCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS TCA 90 bp CTCCTGGACAGGTGTGCTGTTCAGCTCCCCCATCACAGACTGCACTaGCAGAGAGAGTGGACTATGAGCCATGCTGCCATTAGTATTGGG +
Preference number: 5 (lower is better)
Translates to: LLDRCAVQLPHHRLH*QREWTMSHAAISIG
Trigger: CCCAATACTAATGGCAGCATGGCTCATAGTCCACTCTCTCTGTCAGTGCAGTCTGTGATGGGGGAGCTGAACAGCACACCTGTCCAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp CCGGCAATGGGTGCCGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTGTCCTATACTCCCTTaGGGTACTTTCAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: PAMGAGQNHKLEEDTALRCPILP*GTFSSF
Trigger: GAAGCTGCTGAAAGTACCCAAAGGGAGTATAGGACA...CCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp CCGGCAATGGGTGCCGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGAACCTTCCATCCCAGTaGCCAATAGGGTTATCCATG +
Preference number: 5 (lower is better)
Translates to: PAMGAGQNHKLEEDTALRNLPSQ*PIGLSM
Trigger: CATGGATAACCCTATTGGCAACTGGGATGGAAGGTT...CCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp CCGGCAATGGGTGCCGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGATGCTGCCATTAGTATaGGGCATCTTTGTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: PAMGAGQNHKLEEDTALRMLPLV*GIFVRL
Trigger: CAGCCTGACAAAGATGCCCAATACTAATGGCAGCAT...CCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp CAACCCTCTTTGCTCACTGGCTCCCACTATAACAGCCTCTTCTCCACCCACCCATGGGCAGGGCGTCACTaGTGGAATGTTGAAGCCATT +
Preference number: 5 (lower is better)
Translates to: QPSLLTGSHYNSLFSTHPWAGRH*WNVEAI
Trigger: AATGGCTTCAACATTCCACAAGTGACGCCCTGCCCA...TGGGTGGGTGGAGAAGAGGCTGTTATAGTGGGAGCCAGTGAGCAAAGAGGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS TCA 90 bp AACCTGAGTGCTGCAGGTCTTACAGAACTGCTTGATCTTCCCAGCTaGGATGTCCGGATCGTCATAGCACTCCCTGCACTCGTACATCGC +
Preference number: 5 (lower is better)
Translates to: NLSAAGLTELLDLPS*DVRIVIALPALVHR
Trigger: GCGATGTACGAGTGCAGGGAGTGCTATGACGATCCGGACATCTCAGCTGGGAAGATCAAGCAGTTCTGTAAGACCTGCAGCACTCAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS TCA 90 bp TGGGATGAAGGTGAACCTGAGTGCTGCAGGTCTTACAGAACTGCTTaGTCTTCCCAGCTGAGATGTCCGGATCGTCATAGCACTCCCTGC +
Preference number: 5 (lower is better)
Translates to: WDEGEPECCRSYRTA*SSQLRCPDRHSTPC
Trigger: GCAGGGAGTGCTATGACGATCCGGACATCTCAGCTGGGAAGATCAAGCAGTTCTGTAAGACCTGCAGCACTCAGGTTCACCTTCATCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS CCA 90 bp AGAGTGCAGGTCCTCCAGAGACATCTTCAAGTACTCTCCCACTTCTaGGCAGGGCGTCACTTGTGGAATGTTGAAGCCATTCTGACCACC +
Preference number: 5 (lower is better)
Translates to: RVQVLQRHLQVLSHF*AGRHLWNVEAILTT
Trigger: GGTGGTCAGAATGGCTTCAACATTCCACAAGTGACGCCCTGCCCAGAAGTGGGAGAGTACTTGAAGATGTCTCTGGAGGACCTGCACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp CCGGCAATGGGTGCCGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGCAGCAGCTTCTGAGTTaGTTTGTCTGTTACACTGCA +
Preference number: 5 (lower is better)
Translates to: PAMGAGQNHKLEEDTALRQQLLS*FVCYTA
Trigger: TGCAGTGTAACAGACAAACAAACTCAGAAGCTGCTG...CCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp AAGGGCCATCATCAAAAGAGACACCCATTGCCGGCAATGGGTGCCGGACAGAACGACATAAAGGCAAGTTaGGGAGGCCTCCTTTCCTGT +
Preference number: 5 (lower is better)
Translates to: KGHHQKRHPLPAMGAGQNDIKAS*GGLLSC
Trigger: ACAGGAAAGGAGGCCTCCCAAACTTGCCTTTATGTC...GTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTGGGCAGGGCGTCACTaGTGGAATGTTGAAGCCATT +
Preference number: 5 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHWAGRH*WNVEAI
Trigger: AATGGCTTCAACATTCCACAAGTGACGCCCTGCCCA...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp AAGGGCCATCATCAAAAGAGACACCCATTGCCGGCAATGGGTGCCGGACAGAACTGTACAGGCTCATGGTaGGACTCTGGTACATGCACA +
Preference number: 5 (lower is better)
Translates to: KGHHQKRHPLPAMGAGQNCTGSW*DSGTCT
Trigger: TGTGCATGTACCAGAGTCCAACCATGAGCCTGTACA...GTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS GCA 90 bp TGCAAACCTAGAGTCCGGTCTGCAGCTCTTCAGTTTCACAAACAGTaGCTTCTTCAGGGCACACGTGAAATACCGCGTGCCCCTGAAAGT +
Preference number: 5 (lower is better)
Translates to: CKPRVRSAALQFHKQ*LLQGTREIPRAPES
Trigger: ACTTTCAGGGGCACGCGGTATTTCACGTGTGCCCTGAAGAAGGCACTGTTTGTGAAACTGAAGAGCTGCAGACCGGACTCTAGGTTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS CCA 90 bp TCCCCAGATCGCAGCTGTACTTTCACAGGACTGCCCACGTCTACCTaGAGGCCTTTACTTAGTCGGAGTCTGTTTCTAAATAGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: SPDRSCTFTGLPTST*RPLLSRSLFLNRLS
Trigger: GCTCAGCCTATTTAGAAACAGACTCCGACTAAGTAAAGGCCTCCAGGTAGACGTGGGCAGTCCTGTGAAAGTACAGCTGCGATCTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS CCA 90 bp AGACATCTTCAAGTACTCTCCCACTTCTGGGCAGGGCGTCACTTGTaGAATGTTGAAGCCATTCTGACCACCATCTCGATCCGCCATGCT +
Preference number: 5 (lower is better)
Translates to: RHLQVLSHFWAGRHL*NVEAILTTISIRHA
Trigger: AGCATGGCGGATCGAGATGGTGGTCAGAATGGCTTCAACATTCCACAAGTGACGCCCTGCCCAGAAGTGGGAGAGTACTTGAAGATGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp AAGGGCCATCATCAAAAGAGACACCCATTGCCGGCAATGGGTGCCGGACAGAACTGTCCTATACTCCCTTaGGGTACTTTCAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: KGHHQKRHPLPAMGAGQNCPILP*GTFSSF
Trigger: GAAGCTGCTGAAAGTACCCAAAGGGAGTATAGGACA...GTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp AGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTCCTCTCCAAGGTTTACCCCATCCGTGAAACCTaGACCACGACCTTCTTCCAA +
Preference number: 5 (lower is better)
Translates to: STWYISSHSRAPLLSKVYPIRET*TTTFFQ
Trigger: TTGGAAGAAGGTCGTGGTCAAGGTTTCACGGATGGG...GTAAACCTTGGAGAGGAGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CAA 90 bp AACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTCCCATCCGTGAAACCTaGACCACGACCTTCTTCCAA +
Preference number: 5 (lower is better)
Translates to: NHKLEEDTALRFVLSLPTPIRET*TTTFFQ
Trigger: TTGGAAGAAGGTCGTGGTCAAGGTTTCACGGATGGG...AGTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp CGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTCCCATCCGTGAAACCTaGACCACGACCTTCTTCCAA +
Preference number: 5 (lower is better)
Translates to: RTEPQAGGRHSTKVCAVSPIRET*TTTFFQ
Trigger: TTGGAAGAAGGTCGTGGTCAAGGTTTCACGGATGGG...AGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp CAACCCTCTTTGCTCACTGGCTCCCACTATAACAGCCTCTTCTCCACCCACCCAAACCTTCCATCCCAGTaGCCAATAGGGTTATCCATG +
Preference number: 5 (lower is better)
Translates to: QPSLLTGSHYNSLFSTHPNLPSQ*PIGLSM
Trigger: CATGGATAACCCTATTGGCAACTGGGATGGAAGGTT...TGGGTGGGTGGAGAAGAGGCTGTTATAGTGGGAGCCAGTGAGCAAAGAGGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CAA 90 bp AAGGGCCATCATCAAAAGAGACACCCATTGCCGGCAATGGGTGCCGGACAGAACAACCTTCCATCCCAGTaGCCAATAGGGTTATCCATG +
Preference number: 5 (lower is better)
Translates to: KGHHQKRHPLPAMGAGQNNLPSQ*PIGLSM
Trigger: CATGGATAACCCTATTGGCAACTGGGATGGAAGGTT...GTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp AAAAGCACAGGGAACTGTGCTGAGGCCCCTGGTGCCTGGGAGGATAATCCCTTCGCTGGGATGATGTCATaGATGTGCAGGAGAATTGTA +
Preference number: 5 (lower is better)
Translates to: KSTGNCAEAPGAWEDNPFAGMMS*MCRRIV
Trigger: TACAATTCTCCTGCACATCAATGACATCATCCCAGC...GAAGGGATTATCCTCCCAGGCACCAGGGGCCTCAGCACAGTTCCCTGTGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000209532.2
CDS-3UTR CAA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACGACATAAAGGCAAGTTaGGGAGGCCTCCTTTCCTGT +
Preference number: 5 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHDIKAS*GGLLSC
Trigger: ACAGGAAAGGAGGCCTCCCAAACTTGCCTTTATGTC...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp AAGGGCCATCATCAAAAGAGACACCCATTGCCGGCAATGGGTGCCGGACAGAACGTCTTACAGAACTGCTaGATCTTCCCAGCTGAGATG +
Preference number: 5 (lower is better)
Translates to: KGHHQKRHPLPAMGAGQNVLQNC*IFPAEM
Trigger: CATCTCAGCTGGGAAGATCAAGCAGTTCTGTAAGAC...GTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp AACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTTGGGCAGGGCGTCACTaGTGGAATGTTGAAGCCATT +
Preference number: 5 (lower is better)
Translates to: NHKLEEDTALRFVLSLPTWAGRH*WNVEAI
Trigger: AATGGCTTCAACATTCCACAAGTGACGCCCTGCCCA...AGTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS TCA 90 bp TTCAGCTCCCCCATCACAGACTGCACTGACAGAGAGAGTGGACTATaGGCCATGCTGCCATTAGTATTGGGCATCTTTGTCAGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: FSSPITDCTDRESGL*AMLPLVLGIFVRLK
Trigger: CTTCAGCCTGACAAAGATGCCCAATACTAATGGCAGCATGGCTCATAGTCCACTCTCTCTGTCAGTGCAGTCTGTGATGGGGGAGCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS GCA 90 bp CTGGAAATTTCTCTTCCCCAGATCGCAGCTGTACTTTCACAGGACTaGCCACGTCTACCTGGAGGCCTTTACTTAGTCGGAGTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: LEISLPQIAAVLSQD*PRLPGGLYLVGVCF
Trigger: GAAACAGACTCCGACTAAGTAAAGGCCTCCAGGTAGACGTGGGCAGTCCTGTGAAAGTACAGCTGCGATCTGGGGAAGAGAAATTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS CCA 90 bp GACAGGGGATGCAGCCGTGTCTCCAGTCCCAGTCAGGCAAGTCTTTaGGAAGTGATACTGGATGATAAGAATGATTCAACCTCCTGGGAT +
Preference number: 5 (lower is better)
Translates to: DRGCSRVSSPSQASL*EVILDDKNDSTSWD
Trigger: ATCCCAGGAGGTTGAATCATTCTTATCATCCAGTATCACTTCCCAAAGACTTGCCTGACTGGGACTGGAGACACGGCTGCATCCCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTGTCCTATACTCCCTTaGGGTACTTTCAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHCPILP*GTFSSF
Trigger: GAAGCTGCTGAAAGTACCCAAAGGGAGTATAGGACA...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp AACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTCCCCACAGAACGGTCTaGGATGTACTGTCCTATACT +
Preference number: 5 (lower is better)
Translates to: NHKLEEDTALRFVLSLPTPHRTV*DVLSYT
Trigger: AGTATAGGACAGTACATCCAAGACCGTTCTGTGGGG...AGTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACAGCCTCTCCTCACAGTaGGTAATTGCCAACAGTAAC +
Preference number: 5 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHSLSSQ*VIANSN
Trigger: GTTACTGTTGGCAATTACCAACTGTGAGGAGAGGCT...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACAACCTTCCATCCCAGTaGCCAATAGGGTTATCCATG +
Preference number: 5 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHNLPSQ*PIGLSM
Trigger: CATGGATAACCCTATTGGCAACTGGGATGGAAGGTT...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp AAGGTTACACTAGGTTGTCTCCCAAAGTGGTCCCCAGACATGCCTGTCACCCATGACATAAAGGCAAGTTaGGGAGGCCTCCTTTCCTGT +
Preference number: 5 (lower is better)
Translates to: KVTLGCLPKWSPDMPVTHDIKAS*GGLLSC
Trigger: ACAGGAAAGGAGGCCTCCCAAACTTGCCTTTATGTC...ATGGGTGACAGGCATGTCTGGGGACCACTTTGGGAGACAACCTAGTGTAACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CAA 90 bp CGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGACATAAAGGCAAGTTaGGGAGGCCTCCTTTCCTGT +
Preference number: 5 (lower is better)
Translates to: RTEPQAGGRHSTKVCAVSDIKAS*GGLLSC
Trigger: ACAGGAAAGGAGGCCTCCCAAACTTGCCTTTATGTC...AGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp CCGGCAATGGGTGCCGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGCTAATAACTGCTGAATaGTGGGTACTCCAACTTTCT +
Preference number: 5 (lower is better)
Translates to: PAMGAGQNHKLEEDTALRLITAE*WVLQLS
Trigger: AGAAAGTTGGAGTACCCACAATTCAGCAGTTATTAG...CCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCGGCACCCATTGCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACGTCTTACAGAACTGCTaGATCTTCCCAGCTGAGATG +
Preference number: 5 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHVLQNC*IFPAEM
Trigger: CATCTCAGCTGGGAAGATCAAGCAGTTCTGTAAGAC...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp AACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTTGTACAGGCTCATGGTaGGACTCTGGTACATGCACA +
Preference number: 5 (lower is better)
Translates to: NHKLEEDTALRFVLSLPTCTGSW*DSGTCT
Trigger: TGTGCATGTACCAGAGTCCAACCATGAGCCTGTACA...AGTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp CGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTTGTACAGGCTCATGGTaGGACTCTGGTACATGCACA +
Preference number: 5 (lower is better)
Translates to: RTEPQAGGRHSTKVCAVSCTGSW*DSGTCT
Trigger: TGTGCATGTACCAGAGTCCAACCATGAGCCTGTACA...AGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS TCA 90 bp TACATGCACATGTATGCATCGCAAAGAAGTCTGCGCGCACAGCCTTaGATCCTTCTGGAATCCAAAGAGTGCAGGTCCTCCAGAGACATC +
Preference number: 5 (lower is better)
Translates to: YMHMYASQRSLRAQP*ILLESKECRSSRDI
Trigger: GATGTCTCTGGAGGACCTGCACTCTTTGGATTCCAGAAGGATTCAAGGCTGTGCGCGCAGACTTCTTTGCGATGCATACATGTGCATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS GCA 90 bp TTTCTATGCAGAGAACAGCAAATAACTCCATCTTCTGACAGGGGATaGAGCCGTGTCTCCAGTCCCAGTCAGGCAAGTCTTTGGGAAGTG +
Preference number: 5 (lower is better)
Translates to: FLCREQQITPSSDRG*SRVSSPSQASLWEV
Trigger: CACTTCCCAAAGACTTGCCTGACTGGGACTGGAGACACGGCTGCATCCCCTGTCAGAAGATGGAGTTATTTGCTGTTCTCTGCATAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS GCA 90 bp TGGTTGGACTCTGGTACATGCACATGTATGCATCGCAAAGAAGTCTaGGCGCACAGCCTTGAATCCTTCTGGAATCCAAAGAGTGCAGGT +
Preference number: 5 (lower is better)
Translates to: WLDSGTCTCMHRKEV*AHSLESFWNPKSAG
Trigger: ACCTGCACTCTTTGGATTCCAGAAGGATTCAAGGCTGTGCGCGCAGACTTCTTTGCGATGCATACATGTGCATGTACCAGAGTCCAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS CCA 90 bp CTGCCATTAGTATTGGGCATCTTTGTCAGGCTGAAGGGTAAGGAGTaGAATCTGTTCTCGCTAGACAAGGAGTTCATGGAAGGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: LPLVLGIFVRLKGKE*NLFSLDKEFMEGGC
Trigger: GCAGCCTCCTTCCATGAACTCCTTGTCTAGCGAGAACAGATTCCACTCCTTACCCTTCAGCCTGACAAAGATGCCCAATACTAATGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACCAGCAGCTTCTGAGTTaGTTTGTCTGTTACACTGCA +
Preference number: 5 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHQQLLS*FVCYTA
Trigger: TGCAGTGTAACAGACAAACAAACTCAGAAGCTGCTG...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp CGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTTGTCCTATACTCCCTTaGGGTACTTTCAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: RTEPQAGGRHSTKVCAVSCPILP*GTFSSF
Trigger: GAAGCTGCTGAAAGTACCCAAAGGGAGTATAGGACA...AGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp AAGGTTACACTAGGTTGTCTCCCAAAGTGGTCCCCAGACATGCCTGTCACCCATAGCCTCTCCTCACAGTaGGTAATTGCCAACAGTAAC +
Preference number: 5 (lower is better)
Translates to: KVTLGCLPKWSPDMPVTHSLSSQ*VIANSN
Trigger: GTTACTGTTGGCAATTACCAACTGTGAGGAGAGGCT...ATGGGTGACAGGCATGTCTGGGGACCACTTTGGGAGACAACCTAGTGTAACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CAA 90 bp CGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTAGCCTCTCCTCACAGTaGGTAATTGCCAACAGTAAC +
Preference number: 5 (lower is better)
Translates to: RTEPQAGGRHSTKVCAVSSLSSQ*VIANSN
Trigger: GTTACTGTTGGCAATTACCAACTGTGAGGAGAGGCT...AGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp CGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGAAAAGCTGCTTCCCTaGATATACCCCATCCGTGAA +
Preference number: 5 (lower is better)
Translates to: RTEPQAGGRHSTKVCAVSEKLLP*IYPIRE
Trigger: TTCACGGATGGGGTATATCAAGGGAAGCAGCTTTTC...AGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp AACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTAACCTTCCATCCCAGTaGCCAATAGGGTTATCCATG +
Preference number: 5 (lower is better)
Translates to: NHKLEEDTALRFVLSLPTNLPSQ*PIGLSM
Trigger: CATGGATAACCCTATTGGCAACTGGGATGGAAGGTT...AGTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp AAGGTTACACTAGGTTGTCTCCCAAAGTGGTCCCCAGACATGCCTGTCACCCATATGCTGCCATTAGTATaGGGCATCTTTGTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: KVTLGCLPKWSPDMPVTHMLPLV*GIFVRL
Trigger: CAGCCTGACAAAGATGCCCAATACTAATGGCAGCAT...ATGGGTGACAGGCATGTCTGGGGACCACTTTGGGAGACAACCTAGTGTAACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CAA 90 bp AACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTATGCTGCCATTAGTATaGGGCATCTTTGTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: NHKLEEDTALRFVLSLPTMLPLV*GIFVRL
Trigger: CAGCCTGACAAAGATGCCCAATACTAATGGCAGCAT...AGTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp AGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTCCTCTCCAAGGTTTACGTCTTACAGAACTGCTaGATCTTCCCAGCTGAGATG +
Preference number: 5 (lower is better)
Translates to: STWYISSHSRAPLLSKVYVLQNC*IFPAEM
Trigger: CATCTCAGCTGGGAAGATCAAGCAGTTCTGTAAGAC...GTAAACCTTGGAGAGGAGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CAA 90 bp AAGGGCCATCATCAAAAGAGACACCCATTGCCGGCAATGGGTGCCGGACAGAACTCTGGGATGATGTCATaGATGTGCAGGAGAATTGTA +
Preference number: 5 (lower is better)
Translates to: KGHHQKRHPLPAMGAGQNSGMMS*MCRRIV
Trigger: TACAATTCTCCTGCACATCAATGACATCATCCCAGA...GTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS GCA 90 bp CACTCCCTGCACTCGTACATCGCAAGTCCTCCACAGATGCGGCACTaGCTGGGAGTGTCTTCAAGTAAATCTGTTATATTTAATTCCAGG +
Preference number: 5 (lower is better)
Translates to: HSLHSYIASPPQMRH*LGVSSSKSVIFNSR
Trigger: CCTGGAATTAAATATAACAGATTTACTTGAAGACACTCCCAGGCAGTGCCGCATCTGTGGAGGACTTGCGATGTACGAGTGCAGGGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS GCA 90 bp CGTCATAGCACTCCCTGCACTCGTACATCGCAAGTCCTCCACAGATaGGGCACTGCCTGGGAGTGTCTTCAAGTAAATCTGTTATATTTA +
Preference number: 5 (lower is better)
Translates to: RHSTPCTRTSQVLHR*GTAWECLQVNLLYL
Trigger: TAAATATAACAGATTTACTTGAAGACACTCCCAGGCAGTGCCGCATCTGTGGAGGACTTGCGATGTACGAGTGCAGGGAGTGCTATGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS CCA 90 bp TGTATGCATCGCAAAGAAGTCTGCGCGCACAGCCTTGAATCCTTCTaGAATCCAAAGAGTGCAGGTCCTCCAGAGACATCTTCAAGTACT +
Preference number: 5 (lower is better)
Translates to: CMHRKEVCAHSLESF*NPKSAGPPETSSST
Trigger: AGTACTTGAAGATGTCTCTGGAGGACCTGCACTCTTTGGATTCCAGAAGGATTCAAGGCTGTGCGCGCAGACTTCTTTGCGATGCATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp CGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTCAGCAGCTTCTGAGTTaGTTTGTCTGTTACACTGCA +
Preference number: 5 (lower is better)
Translates to: RTEPQAGGRHSTKVCAVSQQLLS*FVCYTA
Trigger: TGCAGTGTAACAGACAAACAAACTCAGAAGCTGCTG...AGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp AAGGGCCATCATCAAAAGAGACACCCATTGCCGGCAATGGGTGCCGGACAGAACGTTACACCTTTCAATTaGATTGGAAACAGGCTGCAA +
Preference number: 5 (lower is better)
Translates to: KGHHQKRHPLPAMGAGQNVTPFN*IGNRLQ
Trigger: TTGCAGCCTGTTTCCAATCAAATTGAAAGGTGTAAC...GTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp AAGGGCCATCATCAAAAGAGACACCCATTGCCGGCAATGGGTGCCGGACAGAACCTAATAACTGCTGAATaGTGGGTACTCCAACTTTCT +
Preference number: 5 (lower is better)
Translates to: KGHHQKRHPLPAMGAGQNLITAE*WVLQLS
Trigger: AGAAAGTTGGAGTACCCACAATTCAGCAGTTATTAG...GTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp CAACCCTCTTTGCTCACTGGCTCCCACTATAACAGCCTCTTCTCCACCCACCCACTAATAACTGCTGAATaGTGGGTACTCCAACTTTCT +
Preference number: 5 (lower is better)
Translates to: QPSLLTGSHYNSLFSTHPLITAE*WVLQLS
Trigger: AGAAAGTTGGAGTACCCACAATTCAGCAGTTATTAG...TGGGTGGGTGGAGAAGAGGCTGTTATAGTGGGAGCCAGTGAGCAAAGAGGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CAA 90 bp CCACAAAACAACACTCAGACAACAAGCACTCTACAGCATCCACCACGGTCTATATGGGCAGGGCGTCACTaGTGGAATGTTGAAGCCATT +
Preference number: 5 (lower is better)
Translates to: PQNNTQTTSTLQHPPRSIWAGRH*WNVEAI
Trigger: AATGGCTTCAACATTCCACAAGTGACGCCCTGCCCA...TATAGACCGTGGTGGATGCTGTAGAGTGCTTGTTGTCTGAGTGTTGTTTTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp TTGGTGCTAACTCTGAGCCAGCTTCACTTTCTCTGGACTGTGGGTCTGTATAAGTGTACAGGCTCATGGTaGGACTCTGGTACATGCACA +
Preference number: 5 (lower is better)
Translates to: LVLTLSQLHFLWTVGLYKCTGSW*DSGTCT
Trigger: TGTGCATGTACCAGAGTCCAACCATGAGCCTGTACA...CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS GCA 90 bp TTATTTGTACAGGCTCATGGTTGGACTCTGGTACATGCACATGTATaGATCGCAAAGAAGTCTGCGCGCACAGCCTTGAATCCTTCTGGA +
Preference number: 5 (lower is better)
Translates to: LFVQAHGWTLVHAHV*IAKKSARTALNPSG
Trigger: TCCAGAAGGATTCAAGGCTGTGCGCGCAGACTTCTTTGCGATGCATACATGTGCATGTACCAGAGTCCAACCATGAGCCTGTACAAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS CCA 90 bp TTGCCTTTTGTGGAAGGAACTCTTGAATGCCCCACAGAACGGTCTTaGATGTACTGTCCTATACTCCCTTTGGGTACTTTCAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: LPFVEGTLECPTERS*MYCPILPLGTFSSF
Trigger: GAAGCTGCTGAAAGTACCCAAAGGGAGTATAGGACAGTACATCCAAGACCGTTCTGTGGGGCATTCAAGAGTTCCTTCCACAAAAGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp TTGGTGCTAACTCTGAGCCAGCTTCACTTTCTCTGGACTGTGGGTCTGTATAAGGAAAAGCTGCTTCCCTaGATATACCCCATCCGTGAA +
Preference number: 5 (lower is better)
Translates to: LVLTLSQLHFLWTVGLYKEKLLP*IYPIRE
Trigger: TTCACGGATGGGGTATATCAAGGGAAGCAGCTTTTC...CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACCATGGATTTTTGGACTaGGATTGTTGTGAGTCAACA +
Preference number: 5 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHHGFLD*DCCEST
Trigger: TGTTGACTCACAACAATCCAAGTCCAAAAATCCATG...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACGTTACACCTTTCAATTaGATTGGAAACAGGCTGCAA +
Preference number: 5 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHVTPFN*IGNRLQ
Trigger: TTGCAGCCTGTTTCCAATCAAATTGAAAGGTGTAAC...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp GAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTATATTCTCAGAGGATaGACTATCTCTGTCCTCAGT +
Preference number: 5 (lower is better)
Translates to: EPQAGGRHSTKVCAVSAHYILRG*TISVLS
Trigger: ACTGAGGACAGAGATAGTCAATCCTCTGAGAATATA...GTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp AAGGGCCATCATCAAAAGAGACACCCATTGCCGGCAATGGGTGCCGGACAGAACTCTGCAAATTTCAGGTaGCTGTTGATAAAAGACCAT +
Preference number: 5 (lower is better)
Translates to: KGHHQKRHPLPAMGAGQNSANFR*LLIKDH
Trigger: ATGGTCTTTTATCAACAGCAACCTGAAATTTGCAGA...GTTCTGTCCGGCACCCATTGCCGGCAATGGGTGTCTCTTTTGATGATGGCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp TTGGTGCTAACTCTGAGCCAGCTTCACTTTCTCTGGACTGTGGGTCTGTATAAGGTCTTACAGAACTGCTaGATCTTCCCAGCTGAGATG +
Preference number: 5 (lower is better)
Translates to: LVLTLSQLHFLWTVGLYKVLQNC*IFPAEM
Trigger: CATCTCAGCTGGGAAGATCAAGCAGTTCTGTAAGAC...CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp AACACATACTGCACTCCTTTGGGTCAGCTTGATAATAACCACCTCCCTGGAGAGGTCTTACAGAACTGCTaGATCTTCCCAGCTGAGATG +
Preference number: 5 (lower is better)
Translates to: NTYCTPLGQLDNNHLPGEVLQNC*IFPAEM
Trigger: CATCTCAGCTGGGAAGATCAAGCAGTTCTGTAAGAC...CTCTCCAGGGAGGTGGTTATTATCAAGCTGACCCAAAGGAGTGCAGTATGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CAA 90 bp TTAATGATACAGAAAGAGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTTGGGCAGGGCGTCACTaGTGGAATGTTGAAGCCATT +
Preference number: 5 (lower is better)
Translates to: LMIQKEYMVHLFSQPRSTWAGRH*WNVEAI
Trigger: AATGGCTTCAACATTCCACAAGTGACGCCCTGCCCA...AGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACTCTTTCTGTATCATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CAA 90 bp AACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTTCTGGGATGATGTCATaGATGTGCAGGAGAATTGTA +
Preference number: 5 (lower is better)
Translates to: NHKLEEDTALRFVLSLPTSGMMS*MCRRIV
Trigger: TACAATTCTCCTGCACATCAATGACATCATCCCAGA...AGTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS CCA 90 bp AATGCCCCACAGAACGGTCTTGGATGTACTGTCCTATACTCCCTTTaGGTACTTTCAGCAGCTTCTGAGTTTGTTTGTCTGTTACACTGC +
Preference number: 5 (lower is better)
Translates to: NAPQNGLGCTVLYSL*VLSAASEFVCLLHC
Trigger: GCAGTGTAACAGACAAACAAACTCAGAAGCTGCTGAAAGTACCCAAAGGGAGTATAGGACAGTACATCCAAGACCGTTCTGTGGGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp CATAAATACTTGTTGGCAGTTACTCACCAGGCCAAGTACGGGGTTTTGCACTCCCAGCAGCTTCTGAGTTaGTTTGTCTGTTACACTGCA +
Preference number: 5 (lower is better)
Translates to: HKYLLAVTHQAKYGVLHSQQLLS*FVCYTA
Trigger: TGCAGTGTAACAGACAAACAAACTCAGAAGCTGCTG...GGAGTGCAAAACCCCGTACTTGGCCTGGTGAGTAACTGCCAACAAGTATTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CAA 90 bp CCACAAAACAACACTCAGACAACAAGCACTCTACAGCATCCACCACGGTCTATATGTCCTATACTCCCTTaGGGTACTTTCAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: PQNNTQTTSTLQHPPRSICPILP*GTFSSF
Trigger: GAAGCTGCTGAAAGTACCCAAAGGGAGTATAGGACA...TATAGACCGTGGTGGATGCTGTAGAGTGCTTGTTGTCTGAGTGTTGTTTTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp CCACAAAACAACACTCAGACAACAAGCACTCTACAGCATCCACCACGGTCTATAAGCCTCTCCTCACAGTaGGTAATTGCCAACAGTAAC +
Preference number: 5 (lower is better)
Translates to: PQNNTQTTSTLQHPPRSISLSSQ*VIANSN
Trigger: GTTACTGTTGGCAATTACCAACTGTGAGGAGAGGCT...TATAGACCGTGGTGGATGCTGTAGAGTGCTTGTTGTCTGAGTGTTGTTTTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp AACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTCATGGATTTTTGGACTaGGATTGTTGTGAGTCAACA +
Preference number: 5 (lower is better)
Translates to: NHKLEEDTALRFVLSLPTHGFLD*DCCEST
Trigger: TGTTGACTCACAACAATCCAAGTCCAAAAATCCATG...AGTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp CGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTCATGGATTTTTGGACTaGGATTGTTGTGAGTCAACA +
Preference number: 5 (lower is better)
Translates to: RTEPQAGGRHSTKVCAVSHGFLD*DCCEST
Trigger: TGTTGACTCACAACAATCCAAGTCCAAAAATCCATG...AGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp CCACAAAACAACACTCAGACAACAAGCACTCTACAGCATCCACCACGGTCTATAATGCTGCCATTAGTATaGGGCATCTTTGTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: PQNNTQTTSTLQHPPRSIMLPLV*GIFVRL
Trigger: CAGCCTGACAAAGATGCCCAATACTAATGGCAGCAT...TATAGACCGTGGTGGATGCTGTAGAGTGCTTGTTGTCTGAGTGTTGTTTTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp CGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTTATATTCTCAGAGGATaGACTATCTCTGTCCTCAGT +
Preference number: 5 (lower is better)
Translates to: RTEPQAGGRHSTKVCAVSYILRG*TISVLS
Trigger: ACTGAGGACAGAGATAGTCAATCCTCTGAGAATATA...AGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp AACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTTATATTCTCAGAGGATaGACTATCTCTGTCCTCAGT +
Preference number: 5 (lower is better)
Translates to: NHKLEEDTALRFVLSLPTYILRG*TISVLS
Trigger: ACTGAGGACAGAGATAGTCAATCCTCTGAGAATATA...AGTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp AACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTCTAATAACTGCTGAATaGTGGGTACTCCAACTTTCT +
Preference number: 5 (lower is better)
Translates to: NHKLEEDTALRFVLSLPTLITAE*WVLQLS
Trigger: AGAAAGTTGGAGTACCCACAATTCAGCAGTTATTAG...AGTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp CCACAAAACAACACTCAGACAACAAGCACTCTACAGCATCCACCACGGTCTATAGTCTTACAGAACTGCTaGATCTTCCCAGCTGAGATG +
Preference number: 5 (lower is better)
Translates to: PQNNTQTTSTLQHPPRSIVLQNC*IFPAEM
Trigger: CATCTCAGCTGGGAAGATCAAGCAGTTCTGTAAGAC...TATAGACCGTGGTGGATGCTGTAGAGTGCTTGTTGTCTGAGTGTTGTTTTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS TCA 90 bp CCTCATCACACTGGAAAAGCTGCTTCCCTTGATATACCCCATCCGTaGAACCTTGACCACGACCTTCTTCCAATAATTCTACTCCAAAGA +
Preference number: 5 (lower is better)
Translates to: PHHTGKAASLDIPHP*NLDHDLLPIILLQR
Trigger: TCTTTGGAGTAGAATTATTGGAAGAAGGTCGTGGTCAAGGTTTCACGGATGGGGTATATCAAGGGAAGCAGCTTTTCCAGTGTGATGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS GCA 90 bp CATCCTTCCCATACTTCACAAAAGCAACATAGTGGCTCGTTTCTATaGAGAGAACAGCAAATAACTCCATCTTCTGACAGGGGATGCAGC +
Preference number: 5 (lower is better)
Translates to: HPSHTSQKQHSGSFL*REQQITPSSDRGCS
Trigger: GCTGCATCCCCTGTCAGAAGATGGAGTTATTTGCTGTTCTCTGCATAGAAACGAGCCACTATGTTGCTTTTGTGAAGTATGGGAAGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS GCA 90 bp GGCCTCCTTTCCTGTGTCACGCTATCTGGGATGATGTCATTGATGTaGAGGAGAATTGTACTTTCAACACTTGCAAAACTACAGAGCTGT +
Preference number: 5 (lower is better)
Translates to: GLLSCVTLSGMMSLM*RRIVLSTLAKLQSC
Trigger: ACAGCTCTGTAGTTTTGCAAGTGTTGAAAGTACAATTCTCCTGCACATCAATGACATCATCCCAGATAGCGTGACACAGGAAAGGAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp AGCTACAGAGCAAGTGATGGAGAAAGAACCCAGGATTTTTGTCTCTTAGTCCTTCCCCACAGAACGGTCTaGGATGTACTGTCCTATACT +
Preference number: 5 (lower is better)
Translates to: SYRASDGERTQDFCLLVLPHRTV*DVLSYT
Trigger: AGTATAGGACAGTACATCCAAGACCGTTCTGTGGGG...AAGGACTAAGAGACAAAAATCCTGGGTTCTTTCTCCATCACTTGCTCTGTAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CAA 90 bp AGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTCCTCTCCAAGGTTTACTTGTACTTTCAACACTaGCAAAACTACAGAGCTGTA +
Preference number: 5 (lower is better)
Translates to: STWYISSHSRAPLLSKVYLYFQH*QNYRAV
Trigger: TACAGCTCTGTAGTTTTGCAAGTGTTGAAAGTACAA...GTAAACCTTGGAGAGGAGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CAA 90 bp AACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTGCCCACTTTGTACTTTCAACACTaGCAAAACTACAGAGCTGTA +
Preference number: 5 (lower is better)
Translates to: NHKLEEDTALRFVLSLPTLYFQH*QNYRAV
Trigger: TACAGCTCTGTAGTTTTGCAAGTGTTGAAAGTACAA...AGTGGGCAGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp CGGACAGAACCACAAGCTGGAGGAAGACACAGCACTAAGGTTTGTGCTGTCTCTTTGTACTTTCAACACTaGCAAAACTACAGAGCTGTA +
Preference number: 5 (lower is better)
Translates to: RTEPQAGGRHSTKVCAVSLYFQH*QNYRAV
Trigger: TACAGCTCTGTAGTTTTGCAAGTGTTGAAAGTACAA...AGAGACAGCACAAACCTTAGTGCTGTGTCTTCCTCCAGCTTGTGGTTCTGTCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp AGCTACAGAGCAAGTGATGGAGAAAGAACCCAGGATTTTTGTCTCTTAGTCCTTTGTACAGGCTCATGGTaGGACTCTGGTACATGCACA +
Preference number: 5 (lower is better)
Translates to: SYRASDGERTQDFCLLVLCTGSW*DSGTCT
Trigger: TGTGCATGTACCAGAGTCCAACCATGAGCCTGTACA...AAGGACTAAGAGACAAAAATCCTGGGTTCTTTCTCCATCACTTGCTCTGTAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CAA 90 bp CATAAATACTTGTTGGCAGTTACTCACCAGGCCAAGTACGGGGTTTTGCACTCCTCTGGGATGATGTCATaGATGTGCAGGAGAATTGTA +
Preference number: 5 (lower is better)
Translates to: HKYLLAVTHQAKYGVLHSSGMMS*MCRRIV
Trigger: TACAATTCTCCTGCACATCAATGACATCATCCCAGA...GGAGTGCAAAACCCCGTACTTGGCCTGGTGAGTAACTGCCAACAAGTATTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109626.4
CDS-3UTR CAA 90 bp TTGGTGCTAACTCTGAGCCAGCTTCACTTTCTCTGGACTGTGGGTCTGTATAAGTCTGGGATGATGTCATaGATGTGCAGGAGAATTGTA +
Preference number: 5 (lower is better)
Translates to: LVLTLSQLHFLWTVGLYKSGMMS*MCRRIV
Trigger: TACAATTCTCCTGCACATCAATGACATCATCCCAGA...CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp CCACCCAGTCTAGGCACTCAGCTATATAAAAGTCTGTGCACAGTATACACACTTCAGCAGCTTCTGAGTTaGTTTGTCTGTTACACTGCA +
Preference number: 5 (lower is better)
Translates to: PPSLGTQLYKSLCTVYTLQQLLS*FVCYTA
Trigger: TGCAGTGTAACAGACAAACAAACTCAGAAGCTGCTG...AAGTGTGTATACTGTGCACAGACTTTTATATAGCTGAGTGCCTAGACTGGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CAA 90 bp AGCTACAGAGCAAGTGATGGAGAAAGAACCCAGGATTTTTGTCTCTTAGTCCTTAGCCTCTCCTCACAGTaGGTAATTGCCAACAGTAAC +
Preference number: 5 (lower is better)
Translates to: SYRASDGERTQDFCLLVLSLSSQ*VIANSN
Trigger: GTTACTGTTGGCAATTACCAACTGTGAGGAGAGGCT...AAGGACTAAGAGACAAAAATCCTGGGTTCTTTCTCCATCACTTGCTCTGTAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CAA 90 bp ACACAGAAACTCAGCAAAGTACAGACATGCAGGAAATCAGCACTATATAGGAAACCCATCCGTGAAACCTaGACCACGACCTTCTTCCAA +
Preference number: 5 (lower is better)
Translates to: TQKLSKVQTCRKSALYRKPIRET*TTTFFQ
Trigger: TTGGAAGAAGGTCGTGGTCAAGGTTTCACGGATGGG...TTTCCTATATAGTGCTGATTTCCTGCATGTCTGTACTTTGCTGAGTTTCTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp AGCTACAGAGCAAGTGATGGAGAAAGAACCCAGGATTTTTGTCTCTTAGTCCTTGAAAAGCTGCTTCCCTaGATATACCCCATCCGTGAA +
Preference number: 5 (lower is better)
Translates to: SYRASDGERTQDFCLLVLEKLLP*IYPIRE
Trigger: TTCACGGATGGGGTATATCAAGGGAAGCAGCTTTTC...AAGGACTAAGAGACAAAAATCCTGGGTTCTTTCTCCATCACTTGCTCTGTAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CAA 90 bp CATAAATACTTGTTGGCAGTTACTCACCAGGCCAAGTACGGGGTTTTGCACTCCCATGGATTTTTGGACTaGGATTGTTGTGAGTCAACA +
Preference number: 5 (lower is better)
Translates to: HKYLLAVTHQAKYGVLHSHGFLD*DCCEST
Trigger: TGTTGACTCACAACAATCCAAGTCCAAAAATCCATG...GGAGTGCAAAACCCCGTACTTGGCCTGGTGAGTAACTGCCAACAAGTATTTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CAA 90 bp CATAAATACTTGTTGGCAGTTACTCACCAGGCCAAGTACGGGGTTTTGCACTCCGTTACACCTTTCAATTaGATTGGAAACAGGCTGCAA +
Preference number: 5 (lower is better)
Translates to: HKYLLAVTHQAKYGVLHSVTPFN*IGNRLQ
Trigger: TTGCAGCCTGTTTCCAATCAAATTGAAAGGTGTAAC...GGAGTGCAAAACCCCGTACTTGGCCTGGTGAGTAACTGCCAACAAGTATTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CAA 90 bp TTGGTGCTAACTCTGAGCCAGCTTCACTTTCTCTGGACTGTGGGTCTGTATAAGGTTACACCTTTCAATTaGATTGGAAACAGGCTGCAA +
Preference number: 5 (lower is better)
Translates to: LVLTLSQLHFLWTVGLYKVTPFN*IGNRLQ
Trigger: TTGCAGCCTGTTTCCAATCAAATTGAAAGGTGTAAC...CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp TTGGTGCTAACTCTGAGCCAGCTTCACTTTCTCTGGACTGTGGGTCTGTATAAGTATATTCTCAGAGGATaGACTATCTCTGTCCTCAGT +
Preference number: 5 (lower is better)
Translates to: LVLTLSQLHFLWTVGLYKYILRG*TISVLS
Trigger: ACTGAGGACAGAGATAGTCAATCCTCTGAGAATATA...CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp TTGGTGCTAACTCTGAGCCAGCTTCACTTTCTCTGGACTGTGGGTCTGTATAAGCTAATAACTGCTGAATaGTGGGTACTCCAACTTTCT +
Preference number: 5 (lower is better)
Translates to: LVLTLSQLHFLWTVGLYKLITAE*WVLQLS
Trigger: AGAAAGTTGGAGTACCCACAATTCAGCAGTTATTAG...CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp ACACAGAAACTCAGCAAAGTACAGACATGCAGGAAATCAGCACTATATAGGAAATGGGCAGGGCGTCACTaGTGGAATGTTGAAGCCATT +
Preference number: 5 (lower is better)
Translates to: TQKLSKVQTCRKSALYRKWAGRH*WNVEAI
Trigger: AATGGCTTCAACATTCCACAAGTGACGCCCTGCCCA...TTTCCTATATAGTGCTGATTTCCTGCATGTCTGTACTTTGCTGAGTTTCTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS GCA 90 bp TTCAAAGAAACTCTGGAGTTTATTTCCAAAGGGGGAGGTTCAACCTaGATTGTATCTCCTGGGCCTGCAAAATCACTTTCCAATCCATTG +
Preference number: 5 (lower is better)
Translates to: FKETLEFISKGGGST*IVSPGPAKSLSNPL
Trigger: CAATGGATTGGAAAGTGATTTTGCAGGCCCAGGAGATACAATGCAGGTTGAACCTCCCCCTTTGGAAATAAACTCCAGAGTTTCTTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS GCA 90 bp TCCTGTGTCACGCTATCTGAAACAGCTGGGATGATGTCATTGATGTaGAGGAGAATTGTACTTTCAACACTTGCAAAACTACAGAGCTGT +
Preference number: 5 (lower is better)
Translates to: SCVTLSETAGMMSLM*RRIVLSTLAKLQSC
Trigger: ACAGCTCTGTAGTTTTGCAAGTGTTGAAAGTACAATTCTCCTGCACATCAATGACATCATCCCAGCTGTTTCAGATAGCGTGACACAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043526.15
CDS CCA 90 bp GGAGTTTATTTCCAAAGGGGGAGGTTCAACCTGCATTGTATCTCCTaGGCCTGCAAAATCACTTTCCAATCCATTGTCATCATCTTCTAT +
Preference number: 5 (lower is better)
Translates to: GVYFQRGRFNLHCIS*ACKITFQSIVIIFY
Trigger: ATAGAAGATGATGACAATGGATTGGAAAGTGATTTTGCAGGCCCAGGAGATACAATGCAGGTTGAACCTCCCCCTTTGGAAATAAACTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp ACACAGAAACTCAGCAAAGTACAGACATGCAGGAAATCAGCACTATATAGGAAACCCCACAGAACGGTCTaGGATGTACTGTCCTATACT +
Preference number: 5 (lower is better)
Translates to: TQKLSKVQTCRKSALYRKPHRTV*DVLSYT
Trigger: AGTATAGGACAGTACATCCAAGACCGTTCTGTGGGG...TTTCCTATATAGTGCTGATTTCCTGCATGTCTGTACTTTGCTGAGTTTCTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp TTGGTGCTAACTCTGAGCCAGCTTCACTTTCTCTGGACTGTGGGTCTGTATAAGTTGTACTTTCAACACTaGCAAAACTACAGAGCTGTA +
Preference number: 5 (lower is better)
Translates to: LVLTLSQLHFLWTVGLYKLYFQH*QNYRAV
Trigger: TACAGCTCTGTAGTTTTGCAAGTGTTGAAAGTACAA...CTTATACAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp ACACAGAAACTCAGCAAAGTACAGACATGCAGGAAATCAGCACTATATAGGAAAGACATAAAGGCAAGTTaGGGAGGCCTCCTTTCCTGT +
Preference number: 5 (lower is better)
Translates to: TQKLSKVQTCRKSALYRKDIKAS*GGLLSC
Trigger: ACAGGAAAGGAGGCCTCCCAAACTTGCCTTTATGTC...TTTCCTATATAGTGCTGATTTCCTGCATGTCTGTACTTTGCTGAGTTTCTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp CCACAAAACAACACTCAGACAACAAGCACTCTACAGCATCCACCACGGTCTATACATGGATTTTTGGACTaGGATTGTTGTGAGTCAACA +
Preference number: 5 (lower is better)
Translates to: PQNNTQTTSTLQHPPRSIHGFLD*DCCEST
Trigger: TGTTGACTCACAACAATCCAAGTCCAAAAATCCATG...TATAGACCGTGGTGGATGCTGTAGAGTGCTTGTTGTCTGAGTGTTGTTTTGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp CCACAAAACAACACTCAGACAACAAGCACTCTACAGCATCCACCACGGTCTATAGTTACACCTTTCAATTaGATTGGAAACAGGCTGCAA +
Preference number: 5 (lower is better)
Translates to: PQNNTQTTSTLQHPPRSIVTPFN*IGNRLQ
Trigger: TTGCAGCCTGTTTCCAATCAAATTGAAAGGTGTAAC...TATAGACCGTGGTGGATGCTGTAGAGTGCTTGTTGTCTGAGTGTTGTTTTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp CCACAAAACAACACTCAGACAACAAGCACTCTACAGCATCCACCACGGTCTATATATATTCTCAGAGGATaGACTATCTCTGTCCTCAGT +
Preference number: 5 (lower is better)
Translates to: PQNNTQTTSTLQHPPRSIYILRG*TISVLS
Trigger: ACTGAGGACAGAGATAGTCAATCCTCTGAGAATATA...TATAGACCGTGGTGGATGCTGTAGAGTGCTTGTTGTCTGAGTGTTGTTTTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS GCA 90 bp TATTTCCAAAGGGGGAGGTTCAACCTGCATTGTATCTCCTGGGCCTaGAAAATCACTTTCCAATCCATTGTCATCATCTTCTATAAGTTC +
Preference number: 5 (lower is better)
Translates to: YFQRGRFNLHCISWA*KITFQSIVIIFYKF
Trigger: GAACTTATAGAAGATGATGACAATGGATTGGAAAGTGATTTTGCAGGCCCAGGAGATACAATGCAGGTTGAACCTCCCCCTTTGGAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS GCA 90 bp TCCTGTGTCACGCTATCTGATAAAGCTGGGATGATGTCATTGATGTaGAGGAGAATTGTACTTTCAACACTTGCAAAACTACAGAGCTGT +
Preference number: 5 (lower is better)
Translates to: SCVTLSDKAGMMSLM*RRIVLSTLAKLQSC
Trigger: ACAGCTCTGTAGTTTTGCAAGTGTTGAAAGTACAATTCTCCTGCACATCAATGACATCATCCCAGCTTTATCAGATAGCGTGACACAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098519.11
ENSMUST00000209532.2
CDS-3UTR CAA 90 bp ACACAGAAACTCAGCAAAGTACAGACATGCAGGAAATCAGCACTATATAGGAAAGAAAAGCTGCTTCCCTaGATATACCCCATCCGTGAA +
Preference number: 5 (lower is better)
Translates to: TQKLSKVQTCRKSALYRKEKLLP*IYPIRE
Trigger: TTCACGGATGGGGTATATCAAGGGAAGCAGCTTTTC...TTTCCTATATAGTGCTGATTTCCTGCATGTCTGTACTTTGCTGAGTTTCTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp CCACAAAACAACACTCAGACAACAAGCACTCTACAGCATCCACCACGGTCTATATTGTACTTTCAACACTaGCAAAACTACAGAGCTGTA +
Preference number: 5 (lower is better)
Translates to: PQNNTQTTSTLQHPPRSILYFQH*QNYRAV
Trigger: TACAGCTCTGTAGTTTTGCAAGTGTTGAAAGTACAA...TATAGACCGTGGTGGATGCTGTAGAGTGCTTGTTGTCTGAGTGTTGTTTTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp TTAATGATACAGAAAGAGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTCATGGATTTTTGGACTaGGATTGTTGTGAGTCAACA +
Preference number: 5 (lower is better)
Translates to: LMIQKEYMVHLFSQPRSTHGFLD*DCCEST
Trigger: TGTTGACTCACAACAATCCAAGTCCAAAAATCCATG...AGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACTCTTTCTGTATCATTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CAA 90 bp CCACCCAGTCTAGGCACTCAGCTATATAAAAGTCTGTGCACAGTATACACACTTTATATTCTCAGAGGATaGACTATCTCTGTCCTCAGT +
Preference number: 5 (lower is better)
Translates to: PPSLGTQLYKSLCTVYTLYILRG*TISVLS
Trigger: ACTGAGGACAGAGATAGTCAATCCTCTGAGAATATA...AAGTGTGTATACTGTGCACAGACTTTTATATAGCTGAGTGCCTAGACTGGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CAA 90 bp TTAATGATACAGAAAGAGTACATGGTACATCTCTTCTCACAGCCGCGCTCCACTCTAATAACTGCTGAATaGTGGGTACTCCAACTTTCT +
Preference number: 5 (lower is better)
Translates to: LMIQKEYMVHLFSQPRSTLITAE*WVLQLS
Trigger: AGAAAGTTGGAGTACCCACAATTCAGCAGTTATTAG...AGTGGAGCGCGGCTGTGAGAAGAGATGTACCATGTACTCTTTCTGTATCATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CAA 90 bp CCACAAAACAACACTCAGACAACAAGCACTCTACAGCATCCACCACGGTCTATATCTGCAAATTTCAGGTaGCTGTTGATAAAAGACCAT +
Preference number: 5 (lower is better)
Translates to: PQNNTQTTSTLQHPPRSISANFR*LLIKDH
Trigger: ATGGTCTTTTATCAACAGCAACCTGAAATTTGCAGA...TATAGACCGTGGTGGATGCTGTAGAGTGCTTGTTGTCTGAGTGTTGTTTTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp GCCTATAAACAAAGACCTCACCATTCCTTAGTTAAACCTTTCAAAATCACACTATGGGCAGGGCGTCACTaGTGGAATGTTGAAGCCATT +
Preference number: 5 (lower is better)
Translates to: AYKQRPHHSLVKPFKITLWAGRH*WNVEAI
Trigger: AATGGCTTCAACATTCCACAAGTGACGCCCTGCCCA...TAGTGTGATTTTGAAAGGTTTAACTAAGGAATGGTGAGGTCTTTGTTTATAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CAA 90 bp AAGGTTTACAAAATTAAGGCCAAACTGGAGCATTCTGATAGCAAGGGATTGTTTTGTACAGGCTCATGGTaGGACTCTGGTACATGCACA +
Preference number: 5 (lower is better)
Translates to: KVYKIKAKLEHSDSKGLFCTGSW*DSGTCT
Trigger: TGTGCATGTACCAGAGTCCAACCATGAGCCTGTACA...AAACAATCCCTTGCTATCAGAATGCTCCAGTTTGGCCTTAATTTTGTAAACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CAA 90 bp AAGGTTTACAAAATTAAGGCCAAACTGGAGCATTCTGATAGCAAGGGATTGTTTTGTCCTATACTCCCTTaGGGTACTTTCAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: KVYKIKAKLEHSDSKGLFCPILP*GTFSSF
Trigger: GAAGCTGCTGAAAGTACCCAAAGGGAGTATAGGACA...AAACAATCCCTTGCTATCAGAATGCTCCAGTTTGGCCTTAATTTTGTAAACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CAA 90 bp GCCTATAAACAAAGACCTCACCATTCCTTAGTTAAACCTTTCAAAATCACACTACCCCACAGAACGGTCTaGGATGTACTGTCCTATACT +
Preference number: 5 (lower is better)
Translates to: AYKQRPHHSLVKPFKITLPHRTV*DVLSYT
Trigger: AGTATAGGACAGTACATCCAAGACCGTTCTGTGGGG...TAGTGTGATTTTGAAAGGTTTAACTAAGGAATGGTGAGGTCTTTGTTTATAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CAA 90 bp CCACCCAGTCTAGGCACTCAGCTATATAAAAGTCTGTGCACAGTATACACACTTTTGTACTTTCAACACTaGCAAAACTACAGAGCTGTA +
Preference number: 5 (lower is better)
Translates to: PPSLGTQLYKSLCTVYTLLYFQH*QNYRAV
Trigger: TACAGCTCTGTAGTTTTGCAAGTGTTGAAAGTACAA...AAGTGTGTATACTGTGCACAGACTTTTATATAGCTGAGTGCCTAGACTGGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CAA 90 bp GCCTATAAACAAAGACCTCACCATTCCTTAGTTAAACCTTTCAAAATCACACTAGACATAAAGGCAAGTTaGGGAGGCCTCCTTTCCTGT +
Preference number: 5 (lower is better)
Translates to: AYKQRPHHSLVKPFKITLDIKAS*GGLLSC
Trigger: ACAGGAAAGGAGGCCTCCCAAACTTGCCTTTATGTC...TAGTGTGATTTTGAAAGGTTTAACTAAGGAATGGTGAGGTCTTTGTTTATAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS-3UTR CAA 90 bp AAGGTTTACAAAATTAAGGCCAAACTGGAGCATTCTGATAGCAAGGGATTGTTTATGCTGCCATTAGTATaGGGCATCTTTGTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: KVYKIKAKLEHSDSKGLFMLPLV*GIFVRL
Trigger: CAGCCTGACAAAGATGCCCAATACTAATGGCAGCAT...AAACAATCCCTTGCTATCAGAATGCTCCAGTTTGGCCTTAATTTTGTAAACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS CCA 90 bp ACTTTGCAGGGTCTTCTGCAACTTCATCAATGTACCATGGATTTTTaGACTTGGATTGTTGTGAGTCAACAGATGACCCATTTAAGGTAT +
Preference number: 5 (lower is better)
Translates to: TLQGLLQLHQCTMDF*TWIVVSQQMTHLRY
Trigger: ATACCTTAAATGGGTCATCTGTTGACTCACAACAATCCAAGTCCAAAAATCCATGGTACATTGATGAAGTTGCAGAAGACCCTGCAAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp AGCTACAGAGCAAGTGATGGAGAAAGAACCCAGGATTTTTGTCTCTTAGTCCTTTCTGCAAATTTCAGGTaGCTGTTGATAAAAGACCAT +
Preference number: 5 (lower is better)
Translates to: SYRASDGERTQDFCLLVLSANFR*LLIKDH
Trigger: ATGGTCTTTTATCAACAGCAACCTGAAATTTGCAGA...AAGGACTAAGAGACAAAAATCCTGGGTTCTTTCTCCATCACTTGCTCTGTAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS CCA 90 bp CACTTAAATAGCCCCCAAATGCTTCATCAATGTACCATGGATTTTTaGACTTGGATTGTTGTGAGTCAACAGATGACCCATTTAAGGTAT +
Preference number: 5 (lower is better)
Translates to: HLNSPQMLHQCTMDF*TWIVVSQQMTHLRY
Trigger: ATACCTTAAATGGGTCATCTGTTGACTCACAACAATCCAAGTCCAAAAATCCATGGTACATTGATGAAGCATTTGGGGGCTATTTAAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000209206.2
CDS-3UTR CAA 90 bp GCCTATAAACAAAGACCTCACCATTCCTTAGTTAAACCTTTCAAAATCACACTAGCTGGGATGATGTCATaGATGTGCAGGAGAATTGTA +
Preference number: 5 (lower is better)
Translates to: AYKQRPHHSLVKPFKITLAGMMS*MCRRIV
Trigger: TACAATTCTCCTGCACATCAATGACATCATCCCAGC...TAGTGTGATTTTGAAAGGTTTAACTAAGGAATGGTGAGGTCTTTGTTTATAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000209532.2
CDS-3UTR CAA 90 bp ACACAGAAACTCAGCAAAGTACAGACATGCAGGAAATCAGCACTATATAGGAAACATGGATTTTTGGACTaGGATTGTTGTGAGTCAACA +
Preference number: 5 (lower is better)
Translates to: TQKLSKVQTCRKSALYRKHGFLD*DCCEST
Trigger: TGTTGACTCACAACAATCCAAGTCCAAAAATCCATG...TTTCCTATATAGTGCTGATTTCCTGCATGTCTGTACTTTGCTGAGTTTCTGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS CCA 90 bp CAGGGTCTTCTGCAACTTCATCAATGTACCATGGATTTTTGGACTTaGATTGTTGTGAGTCAACAGATGACCCATTTAAGGTATAAAATA +
Preference number: 5 (lower is better)
Translates to: QGLLQLHQCTMDFWT*IVVSQQMTHLRYKI
Trigger: TATTTTATACCTTAAATGGGTCATCTGTTGACTCACAACAATCCAAGTCCAAAAATCCATGGTACATTGATGAAGTTGCAGAAGACCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp ACACAGAAACTCAGCAAAGTACAGACATGCAGGAAATCAGCACTATATAGGAAATCTGCAAATTTCAGGTaGCTGTTGATAAAAGACCAT +
Preference number: 5 (lower is better)
Translates to: TQKLSKVQTCRKSALYRKSANFR*LLIKDH
Trigger: ATGGTCTTTTATCAACAGCAACCTGAAATTTGCAGA...TTTCCTATATAGTGCTGATTTCCTGCATGTCTGTACTTTGCTGAGTTTCTGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS GCA 90 bp AGAATAAAGTTGAGTCTAAGTAACAAGAATTGTAATGGCCCTGGATaGCTTTCTTCTTTCCAATCATTATCTCTAAACCTTCCTTTTCCA +
Preference number: 5 (lower is better)
Translates to: RIKLSLSNKNCNGPG*LSSFQSLSLNLPFP
Trigger: TGGAAAAGGAAGGTTTAGAGATAATGATTGGAAAGAAGAAAGGCATCCAGGGCCATTACAATTCTTGTTACTTAGACTCAACTTTATTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS-3UTR CAA 90 bp GCCTATAAACAAAGACCTCACCATTCCTTAGTTAAACCTTTCAAAATCACACTATCTGCAAATTTCAGGTaGCTGTTGATAAAAGACCAT +
Preference number: 5 (lower is better)
Translates to: AYKQRPHHSLVKPFKITLSANFR*LLIKDH
Trigger: ATGGTCTTTTATCAACAGCAACCTGAAATTTGCAGA...TAGTGTGATTTTGAAAGGTTTAACTAAGGAATGGTGAGGTCTTTGTTTATAGGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
CDS CCA 72 bp AGCCCACCTCTAGCCCGTGTGCATTCCCAGAAGAGATaGGCAAGGGTGGACTCTCCTGGACAGGTGTGCTGT +
Preference number: 6 (lower is better)
Translates to: SPPLARVHSQKR*ARVDSPGQVCC
Trigger: ACAGCACACCTGTCCAGGAGAGTCCACCCTTGCCCATCTCTTCTGGGAATGCACACGGGCTAGAGGTGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS GCA 72 bp TCCCAGCTGAGATGTCCGGATCGTCATAGCACTCCCTaGACTCGTACATCGCAAGTCCTCCACAGATGCGGC +
Preference number: 6 (lower is better)
Translates to: SQLRCPDRHSTP*TRTSQVLHRCG
Trigger: GCCGCATCTGTGGAGGACTTGCGATGTACGAGTGCAGGGAGTGCTATGACGATCCGGACATCTCAGCTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS GCA 72 bp AAGAGATGGGCAAGGGTGGACTCTCCTGGACAGGTGTaGTGTTCAGCTCCCCCATCACAGACTGCACTGACA +
Preference number: 6 (lower is better)
Translates to: KRWARVDSPGQV*CSAPPSQTALT
Trigger: TGTCAGTGCAGTCTGTGATGGGGGAGCTGAACAGCACACCTGTCCAGGAGAGTCCACCCTTGCCCATCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS TCA 72 bp AGGTGTGCTGTTCAGCTCCCCCATCACAGACTGCACTaGCAGAGAGAGTGGACTATGAGCCATGCTGCCATT +
Preference number: 6 (lower is better)
Translates to: RCAVQLPHHRLH*QREWTMSHAAI
Trigger: AATGGCAGCATGGCTCATAGTCCACTCTCTCTGTCAGTGCAGTCTGTGATGGGGGAGCTGAACAGCACACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS TCA 72 bp GCTGCAGGTCTTACAGAACTGCTTGATCTTCCCAGCTaGGATGTCCGGATCGTCATAGCACTCCCTGCACTC +
Preference number: 6 (lower is better)
Translates to: AAGLTELLDLPS*DVRIVIALPAL
Trigger: GAGTGCAGGGAGTGCTATGACGATCCGGACATCTCAGCTGGGAAGATCAAGCAGTTCTGTAAGACCTGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS GCA 72 bp TCTCTTCCCCAGATCGCAGCTGTACTTTCACAGGACTaGCCACGTCTACCTGGAGGCCTTTACTTAGTCGGA +
Preference number: 6 (lower is better)
Translates to: SLPQIAAVLSQD*PRLPGGLYLVG
Trigger: TCCGACTAAGTAAAGGCCTCCAGGTAGACGTGGGCAGTCCTGTGAAAGTACAGCTGCGATCTGGGGAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS GCA 72 bp AGAGTCCGGTCTGCAGCTCTTCAGTTTCACAAACAGTaGCTTCTTCAGGGCACACGTGAAATACCGCGTGCC +
Preference number: 6 (lower is better)
Translates to: RVRSAALQFHKQ*LLQGTREIPRA
Trigger: GGCACGCGGTATTTCACGTGTGCCCTGAAGAAGGCACTGTTTGTGAAACTGAAGAGCTGCAGACCGGACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS GCA 72 bp ACTCCCTGCACTCGTACATCGCAAGTCCTCCACAGATaGGGCACTGCCTGGGAGTGTCTTCAAGTAAATCTG +
Preference number: 6 (lower is better)
Translates to: TPCTRTSQVLHR*GTAWECLQVNL
Trigger: CAGATTTACTTGAAGACACTCCCAGGCAGTGCCGCATCTGTGGAGGACTTGCGATGTACGAGTGCAGGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS TCA 72 bp TCCCCGACACCGTCCTCTCCGCTAATAAAGGTCCTCTaGAGCGTACAACTCCTGGAAATTTCTCTTCCCCAG +
Preference number: 6 (lower is better)
Translates to: SPTPSSPLIKVL*SVQLLEISLPQ
Trigger: CTGGGGAAGAGAAATTTCCAGGAGTTGTACGCTTCAGAGGACCTTTATTAGCGGAGAGGACGGTGTCGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS TCA 72 bp GGTGAACCTGAGTGCTGCAGGTCTTACAGAACTGCTTaGTCTTCCCAGCTGAGATGTCCGGATCGTCATAGC +
Preference number: 6 (lower is better)
Translates to: GEPECCRSYRTA*SSQLRCPDRHS
Trigger: GCTATGACGATCCGGACATCTCAGCTGGGAAGATCAAGCAGTTCTGTAAGACCTGCAGCACTCAGGTTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS CCA 72 bp CAAGTACTCTCCCACTTCTGGGCAGGGCGTCACTTGTaGAATGTTGAAGCCATTCTGACCACCATCTCGATC +
Preference number: 6 (lower is better)
Translates to: QVLSHFWAGRHL*NVEAILTTISI
Trigger: GATCGAGATGGTGGTCAGAATGGCTTCAACATTCCACAAGTGACGCCCTGCCCAGAAGTGGGAGAGTACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS CCA 72 bp CGCAAAGAAGTCTGCGCGCACAGCCTTGAATCCTTCTaGAATCCAAAGAGTGCAGGTCCTCCAGAGACATCT +
Preference number: 6 (lower is better)
Translates to: RKEVCAHSLESF*NPKSAGPPETS
Trigger: AGATGTCTCTGGAGGACCTGCACTCTTTGGATTCCAGAAGGATTCAAGGCTGTGCGCGCAGACTTCTTTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS CAA 72 bp CTTCAAGTACTCTCCCACTTCTGGGCAGGGCGTCACTaGTGGAATGTTGAAGCCATTCTGACCACCATCTCG +
Preference number: 6 (lower is better)
Translates to: LQVLSHFWAGRH*WNVEAILTTIS
Trigger: CGAGATGGTGGTCAGAATGGCTTCAACATTCCACAAGTGACGCCCTGCCCAGAAGTGGGAGAGTACTTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS GCA 72 bp AGAGAACAGCAAATAACTCCATCTTCTGACAGGGGATaGAGCCGTGTCTCCAGTCCCAGTCAGGCAAGTCTT +
Preference number: 6 (lower is better)
Translates to: REQQITPSSDRG*SRVSSPSQASL
Trigger: AAGACTTGCCTGACTGGGACTGGAGACACGGCTGCATCCCCTGTCAGAAGATGGAGTTATTTGCTGTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS CCA 72 bp GTCCTCCAGAGACATCTTCAAGTACTCTCCCACTTCTaGGCAGGGCGTCACTTGTGGAATGTTGAAGCCATT +
Preference number: 6 (lower is better)
Translates to: VLQRHLQVLSHF*AGRHLWNVEAI
Trigger: AATGGCTTCAACATTCCACAAGTGACGCCCTGCCCAGAAGTGGGAGAGTACTTGAAGATGTCTCTGGAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS CAA 90 bp GTACATGCACATGTATGCATCGCAAAGAAGTCTGCGCGCACAGCCTaGAATCCTTCTGGAATCCAAAGAGTGCAGGTCCTCCAGAGACAT +
Preference number: 6 (lower is better)
Translates to: VHAHVCIAKKSARTA*NPSGIQRVQVLQRH
Trigger: ATGTCTCTGGAGGACCTGCACTCTTTGGATTCCAGAAGGATTCAAGGCTGTGCGCGCAGACTTCTTTGCGATGCATACATGTGCATGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS TCA 72 bp CCCATCACAGACTGCACTGACAGAGAGAGTGGACTATaGGCCATGCTGCCATTAGTATTGGGCATCTTTGTC +
Preference number: 6 (lower is better)
Translates to: PITDCTDRESGL*AMLPLVLGIFV
Trigger: GACAAAGATGCCCAATACTAATGGCAGCATGGCTCATAGTCCACTCTCTCTGTCAGTGCAGTCTGTGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS TCA 72 bp GTTTCTATGCAGAGAACAGCAAATAACTCCATCTTCTaGCAGGGGATGCAGCCGTGTCTCCAGTCCCAGTCA +
Preference number: 6 (lower is better)
Translates to: VSMQRTANNSIF*QGMQPCLQSQS
Trigger: TGACTGGGACTGGAGACACGGCTGCATCCCCTGTCAGAAGATGGAGTTATTTGCTGTTCTCTGCATAGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS CCA 72 bp CGCAGCTGTACTTTCACAGGACTGCCCACGTCTACCTaGAGGCCTTTACTTAGTCGGAGTCTGTTTCTAAAT +
Preference number: 6 (lower is better)
Translates to: RSCTFTGLPTST*RPLLSRSLFLN
Trigger: ATTTAGAAACAGACTCCGACTAAGTAAAGGCCTCCAGGTAGACGTGGGCAGTCCTGTGAAAGTACAGCTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS CAA 90 bp CTAGATGAACCTTTGTCACCTACACCTCTTGACATAAAGGCAAGTTaGGGAGGCCTCCTTTCCTGTGTCACGCTATCTGAAACAGCTGGG +
Preference number: 6 (lower is better)
Translates to: LDEPLSPTPLDIKAS*GGLLSCVTLSETAG
Trigger: CCCAGCTGTTTCAGATAGCGTGACACAGGAAAGGAGGCCTCCCAAACTTGCCTTTATGTCAAGAGGTGTAGGTGACAAAGGTTCATCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043526.15
CDS GCA 72 bp TCTGGTACATGCACATGTATGCATCGCAAAGAAGTCTaGGCGCACAGCCTTGAATCCTTCTGGAATCCAAAG +
Preference number: 6 (lower is better)
Translates to: SGTCTCMHRKEV*AHSLESFWNPK
Trigger: CTTTGGATTCCAGAAGGATTCAAGGCTGTGCGCGCAGACTTCTTTGCGATGCATACATGTGCATGTACCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS CAA 90 bp CTAGATGAACCTTTGTCACCTACACCTCTTGACATAAAGGCAAGTTaGGGAGGCCTCCTTTCCTGTGTCACGCTATCTGGGATGATGTCA +
Preference number: 6 (lower is better)
Translates to: LDEPLSPTPLDIKAS*GGLLSCVTLSGMMS
Trigger: TGACATCATCCCAGATAGCGTGACACAGGAAAGGAGGCCTCCCAAACTTGCCTTTATGTCAAGAGGTGTAGGTGACAAAGGTTCATCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS CAA 90 bp CTAGATGAACCTTTGTCACCTACACCTCTTGACATAAAGGCAAGTTaGGGAGGCCTCCTTTCCTGTGTCACGCTATCTGATAAAGCTGGG +
Preference number: 6 (lower is better)
Translates to: LDEPLSPTPLDIKAS*GGLLSCVTLSDKAG
Trigger: CCCAGCTTTATCAGATAGCGTGACACAGGAAAGGAGGCCTCCCAAACTTGCCTTTATGTCAAGAGGTGTAGGTGACAAAGGTTCATCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098519.11
ENSMUST00000209532.2
CDS GCA 72 bp ACTCTGGAGTTTATTTCCAAAGGGGGAGGTTCAACCTaGATTGTATCTCCTGGGCCTGCAAAATCACTTTCC +
Preference number: 6 (lower is better)
Translates to: TLEFISKGGGST*IVSPGPAKSLS
Trigger: GGAAAGTGATTTTGCAGGCCCAGGAGATACAATGCAGGTTGAACCTCCCCCTTTGGAAATAAACTCCAGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS GCA 72 bp CACTCGTACATCGCAAGTCCTCCACAGATGCGGCACTaGCTGGGAGTGTCTTCAAGTAAATCTGTTATATTT +
Preference number: 6 (lower is better)
Translates to: HSYIASPPQMRH*LGVSSSKSVIF
Trigger: AAATATAACAGATTTACTTGAAGACACTCCCAGGCAGTGCCGCATCTGTGGAGGACTTGCGATGTACGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS CCA 72 bp GTATTGGGCATCTTTGTCAGGCTGAAGGGTAAGGAGTaGAATCTGTTCTCGCTAGACAAGGAGTTCATGGAA +
Preference number: 6 (lower is better)
Translates to: VLGIFVRLKGKE*NLFSLDKEFME
Trigger: TTCCATGAACTCCTTGTCTAGCGAGAACAGATTCCACTCCTTACCCTTCAGCCTGACAAAGATGCCCAATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS CCA 72 bp GAAGTGATACTGGATGATAAGAATGATTCAACCTCCTaGGATGAAGGTGAACCTGAGTGCTGCAGGTCTTAC +
Preference number: 6 (lower is better)
Translates to: EVILDDKNDSTS*DEGEPECCRSY
Trigger: GTAAGACCTGCAGCACTCAGGTTCACCTTCATCCCAGGAGGTTGAATCATTCTTATCATCCAGTATCACTTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS CAA 72 bp CTACAGAGCTGTACTCCATCAAACCTTCCATCCCAGTaGCCAATAGGGTTATCCATGTCCACACCAACAAAA +
Preference number: 6 (lower is better)
Translates to: LQSCTPSNLPSQ*PIGLSMSTPTK
Trigger: TTTTGTTGGTGTGGACATGGATAACCCTATTGGCAACTGGGATGGAAGGTTTGATGGAGTACAGCTCTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS TCA 72 bp ACTGGAAAAGCTGCTTCCCTTGATATACCCCATCCGTaGAACCTTGACCACGACCTTCTTCCAATAATTCTA +
Preference number: 6 (lower is better)
Translates to: TGKAASLDIPHP*NLDHDLLPIIL
Trigger: TAGAATTATTGGAAGAAGGTCGTGGTCAAGGTTTCACGGATGGGGTATATCAAGGGAAGCAGCTTTTCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS CAA 90 bp AAGAAACTCTGGAGTTTATTTCCAAAGGGGGAGGTTCAACCTGCATaGTATCTCCTGGGCCTGCAAAATCACTTTCCAATCCATTGTCAT +
Preference number: 6 (lower is better)
Translates to: KKLWSLFPKGEVQPA*YLLGLQNHFPIHCH
Trigger: ATGACAATGGATTGGAAAGTGATTTTGCAGGCCCAGGAGATACAATGCAGGTTGAACCTCCCCCTTTGGAAATAAACTCCAGAGTTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS GCA 72 bp CATACTTCACAAAAGCAACATAGTGGCTCGTTTCTATaGAGAGAACAGCAAATAACTCCATCTTCTGACAGG +
Preference number: 6 (lower is better)
Translates to: HTSQKQHSGSFL*REQQITPSSDR
Trigger: CCTGTCAGAAGATGGAGTTATTTGCTGTTCTCTGCATAGAAACGAGCCACTATGTTGCTTTTGTGAAGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS GCA 72 bp TCCTGTGTCACGCTATCTGGGATGATGTCATTGATGTaGAGGAGAATTGTACTTTCAACACTTGCAAAACTA +
Preference number: 6 (lower is better)
Translates to: SCVTLSGMMSLM*RRIVLSTLAKL
Trigger: TAGTTTTGCAAGTGTTGAAAGTACAATTCTCCTGCACATCAATGACATCATCCCAGATAGCGTGACACAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS CAA 90 bp GACTTTGCAGGGTCTTCTGCAACTTCATCAATGTACCATGGATTTTaGGACTTGGATTGTTGTGAGTCAACAGATGACCCATTTAAGGTA +
Preference number: 6 (lower is better)
Translates to: DFAGSSATSSMYHGF*DLDCCESTDDPFKV
Trigger: TACCTTAAATGGGTCATCTGTTGACTCACAACAATCCAAGTCCAAAAATCCATGGTACATTGATGAAGTTGCAGAAGACCCTGCAAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS CAA 90 bp ACCTGCATTGTATCTCCTGGGCCTGCAAAATCACTTTCCAATCCATaGTCATCATCTTCTATAAGTTCTAGTTTGTCCAATGCAACAAAC +
Preference number: 6 (lower is better)
Translates to: TCIVSPGPAKSLSNP*SSSSISSSLSNATN
Trigger: GTTTGTTGCATTGGACAAACTAGAACTTATAGAAGATGATGACAATGGATTGGAAAGTGATTTTGCAGGCCCAGGAGATACAATGCAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS GCA 72 bp ACGCTATCTGAAACAGCTGGGATGATGTCATTGATGTaGAGGAGAATTGTACTTTCAACACTTGCAAAACTA +
Preference number: 6 (lower is better)
Translates to: TLSETAGMMSLM*RRIVLSTLAKL
Trigger: TAGTTTTGCAAGTGTTGAAAGTACAATTCTCCTGCACATCAATGACATCATCCCAGCTGTTTCAGATAGCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043526.15
CDS CCA 72 bp CTGCAACTTCATCAATGTACCATGGATTTTTGGACTTaGATTGTTGTGAGTCAACAGATGACCCATTTAAGG +
Preference number: 6 (lower is better)
Translates to: LQLHQCTMDFWT*IVVSQQMTHLR
Trigger: CCTTAAATGGGTCATCTGTTGACTCACAACAATCCAAGTCCAAAAATCCATGGTACATTGATGAAGTTGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS CAA 72 bp AGTCTGTTTCTAAATAGGCTGAGCCTCTCCTCACAGTaGGTAATTGCCAACAGTAACTCTGTGAATTTTTCA +
Preference number: 6 (lower is better)
Translates to: SLFLNRLSLSSQ*VIANSNSVNFS
Trigger: TGAAAAATTCACAGAGTTACTGTTGGCAATTACCAACTGTGAGGAGAGGCTCAGCCTATTTAGAAACAGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS CAA 72 bp TCCAATCCATTGTCATCATCTTCTATAAGTTCTAGTTaGTCCAATGCAACAAACACGCCACAGTCCTCATCA +
Preference number: 6 (lower is better)
Translates to: SNPLSSSSISSS*SNATNTPQSSS
Trigger: TGATGAGGACTGTGGCGTGTTTGTTGCATTGGACAAACTAGAACTTATAGAAGATGATGACAATGGATTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS CAA 90 bp AAATCACTTTCCAATCCATTGTCATCATCTTCTATAAGTTCTAGTTaGTCCAATGCAACAAACACGCCACAGTCCTCATCACACTGGAAA +
Preference number: 6 (lower is better)
Translates to: KSLSNPLSSSSISSS*SNATNTPQSSSHWK
Trigger: TTTCCAGTGTGATGAGGACTGTGGCGTGTTTGTTGCATTGGACAAACTAGAACTTATAGAAGATGATGACAATGGATTGGAAAGTGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2
CDS GCA 72 bp ACGCTATCTGATAAAGCTGGGATGATGTCATTGATGTaGAGGAGAATTGTACTTTCAACACTTGCAAAACTA +
Preference number: 6 (lower is better)
Translates to: TLSDKAGMMSLM*RRIVLSTLAKL
Trigger: TAGTTTTGCAAGTGTTGAAAGTACAATTCTCCTGCACATCAATGACATCATCCCAGCTTTATCAGATAGCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098519.11
ENSMUST00000209532.2
CDS CCA 72 bp CAAATGCTTCATCAATGTACCATGGATTTTTGGACTTaGATTGTTGTGAGTCAACAGATGACCCATTTAAGG +
Preference number: 6 (lower is better)
Translates to: QMLHQCTMDFWT*IVVSQQMTHLR
Trigger: CCTTAAATGGGTCATCTGTTGACTCACAACAATCCAAGTCCAAAAATCCATGGTACATTGATGAAGCATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209206.2
CDS CCA 72 bp TTAAATAGTTTAAAGTCTTTTCCAAACCGAGGCATCTaGATAATCAAGCATGATGGTGCCTCTGCAAATTTC +
Preference number: 6 (lower is better)
Translates to: LNSLKSFPNRGI*IIKHDGASANF
Trigger: GAAATTTGCAGAGGCACCATCATGCTTGATTATCCAGATGCCTCGGTTTGGAAAAGACTTTAAACTATTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000043526.15
ENSMUST00000098519.11
ENSMUST00000109626.4
ENSMUST00000209206.2
ENSMUST00000209532.2
ENSMUST00000209559.2
ENSMUST00000211554.2