Pregenerated sensors for CYLC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073001Ensembl transcript IDs: ENSMUST00000210720.3
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ATTTGGATGCTGGTCTTTATTATAGTTCCACAGAAGCAGGGAGGCTGGTTTGAACATAAGGCCATTCTGTaGAACTTAGGACTCAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: IWMLVFIIVPQKQGGWFEHKAIL*NLGLSF Trigger: GAAGCTGAGTCCTAAGTTTCACAGAATGGCCTTATG...TTCAAACCAGCCTCCCTGCTTCTGTGGAACTATAATAAAGACCAGCATCCAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS-3UTR TCA 90 bp | TGGATGCTGGTCTTTATTATAGTTCCACAGAAGCAGGGAGGCTGGTTTGAAAGTCGTCTTACCTTTCTTTaGAACCATGGACGCCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: WMLVFIIVPQKQGGWFESRLTFL*NHGRPR Trigger: TCTGGGGCGTCCATGGTTTCAAAGAAAGGTAAGACG...ACTTTCAAACCAGCCTCCCTGCTTCTGTGGAACTATAATAAAGACCAGCATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS-3UTR CCA 90 bp | TTTATTATAGTTCCACAGAAGCAGGGAGGCTGGTTTGAAAGTAGTTTGCTTCCACTGGCATTCCCGTCTTaGAGTCTGTGGATGAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: FIIVPQKQGGWFESSLLPLAFPS*SLWMRP Trigger: AGGCCTCATCCACAGACTCCAAGACGGGAATGCCAG...TGGAAGCAAACTACTTTCAAACCAGCCTCCCTGCTTCTGTGGAACTATAATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS-3UTR CCA 90 bp | TGGATGCTGGTCTTTATTATAGTTCCACAGAAGCAGGGAGGCTGGTTTGAAAGTTGTCCTTGCAACATGTaGCTGCATTCCCCTTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: WMLVFIIVPQKQGGWFESCPCNM*LHSPSE Trigger: TTCTGAAGGGGAATGCAGCCACATGTTGCAAGGACA...ACTTTCAAACCAGCCTCCCTGCTTCTGTGGAACTATAATAAAGACCAGCATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS-3UTR CCA 90 bp | ATTTGGATGCTGGTCTTTATTATAGTTCCACAGAAGCAGGGAGGCTGGTTTGAATCCTCTTCTCATTCCTaGCATTCCCGTCTTGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: IWMLVFIIVPQKQGGWFESSSHS*HSRLGV Trigger: GACTCCAAGACGGGAATGCCAGGAATGAGAAGAGGA...TTCAAACCAGCCTCCCTGCTTCTGTGGAACTATAATAAAGACCAGCATCCAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS-3UTR GCA 90 bp | TGGATGCTGGTCTTTATTATAGTTCCACAGAAGCAGGGAGGCTGGTTTGAAAGTCTTGCAACATGTGGCTaGATTCCCCTTCAGAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: WMLVFIIVPQKQGGWFESLATCG*IPLQNK Trigger: TTTGTTCTGAAGGGGAATGCAGCCACATGTTGCAAG...ACTTTCAAACCAGCCTCCCTGCTTCTGTGGAACTATAATAAAGACCAGCATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS-3UTR CCA 90 bp | TTTATTATAGTTCCACAGAAGCAGGGAGGCTGGTTTGAAAGTAGTTTGCTTCCACTTTCTTTGAAACCATaGACGCCCCAGATCCACTAC | + |
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Preference number: 4 (lower is better) Translates to: FIIVPQKQGGWFESSLLPLSLKP*TPQIHY Trigger: GTAGTGGATCTGGGGCGTCCATGGTTTCAAAGAAAG...TGGAAGCAAACTACTTTCAAACCAGCCTCCCTGCTTCTGTGGAACTATAATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS-3UTR TCA 90 bp | ATTTGGATGCTGGTCTTTATTATAGTTCCACAGAAGCAGGGAGGCTGGTTTGAATCCAGAATCAATATCTaGGTCCCTTTCCTTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: IWMLVFIIVPQKQGGWFESRINI*VPFLLS Trigger: GGAAAGAAGGAAAGGGACTCAGATATTGATTCTGGA...TTCAAACCAGCCTCCCTGCTTCTGTGGAACTATAATAAAGACCAGCATCCAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS-3UTR GCA 90 bp | TGGATGCTGGTCTTTATTATAGTTCCACAGAAGCAGGGAGGCTGGTTTGAAAGTCTCACTTTCAGAGGATaGTGTATTCTTCTTTGCATC | + |
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Preference number: 4 (lower is better) Translates to: WMLVFIIVPQKQGGWFESLTFRG*CILLCI Trigger: GATGCAAAGAAGAATACAGCATCCTCTGAAAGTGAG...ACTTTCAAACCAGCCTCCCTGCTTCTGTGGAACTATAATAAAGACCAGCATCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS-3UTR TCA 90 bp | TGGATGCTGGTCTTTATTATAGTTCCACAGAAGCAGGGAGGCTGGTTTGAAAGTTCGACAGGAAGAACTTaGAGTTTGAACATCTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: WMLVFIIVPQKQGGWFESSTGRT*SLNIFN Trigger: ATTGAAGATGTTCAAACTTCAAGTTCTTCCTGTCGA...ACTTTCAAACCAGCCTCCCTGCTTCTGTGGAACTATAATAAAGACCAGCATCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS-3UTR TCA 90 bp | TGGATGCTGGTCTTTATTATAGTTCCACAGAAGCAGGGAGGCTGGTTTGAAAGTTTTCTTTGCATCTTTTaGGCCTCCAGAATCAATATC | + |
|
Preference number: 4 (lower is better) Translates to: WMLVFIIVPQKQGGWFESFLCIF*ASRINI Trigger: GATATTGATTCTGGAGGCTCAAAAGATGCAAAGAAA...ACTTTCAAACCAGCCTCCCTGCTTCTGTGGAACTATAATAAAGACCAGCATCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS-3UTR TCA 90 bp | ATTTGGATGCTGGTCTTTATTATAGTTCCACAGAAGCAGGGAGGCTGGTTTGAATTGACTTTAAAACTCTaGACCCTGACGAATCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: IWMLVFIIVPQKQGGWFELTLKL*TLTNLQ Trigger: CTGAAGATTCGTCAGGGTTCAGAGTTTTAAAGTCAA...TTCAAACCAGCCTCCCTGCTTCTGTGGAACTATAATAAAGACCAGCATCCAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS-3UTR GCA 90 bp | TGGATGCTGGTCTTTATTATAGTTCCACAGAAGCAGGGAGGCTGGTTTGAAAGTAGAATCAGTAGAGACTaGTTTCTTCATGACACCTTT | + |
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Preference number: 4 (lower is better) Translates to: WMLVFIIVPQKQGGWFESRISRD*FLHDTF Trigger: AAAGGTGTCATGAAGAAAGCAGTCTCTACTGATTCT...ACTTTCAAACCAGCCTCCCTGCTTCTGTGGAACTATAATAAAGACCAGCATCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS-3UTR CCA 90 bp | ATTTGGATGCTGGTCTTTATTATAGTTCCACAGAAGCAGGGAGGCTGGTTTGAATGGTTATTGTTCTCATaGGCTCCAGATTTACTACAC | + |
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Preference number: 4 (lower is better) Translates to: IWMLVFIIVPQKQGGWFEWLLFS*APDLLH Trigger: GTGTAGTAAATCTGGAGCCCATGAGAACAATAACCA...TTCAAACCAGCCTCCCTGCTTCTGTGGAACTATAATAAAGACCAGCATCCAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS-3UTR CCA 90 bp | ATTTGGATGCTGGTCTTTATTATAGTTCCACAGAAGCAGGGAGGCTGGTTTGAAAGCATATCTTGCTTTTaGAGATGGAGATTCCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IWMLVFIIVPQKQGGWFESISCF*RWRFLA Trigger: TGCAAGGAATCTCCATCTCCAAAAGCAAGATATGCT...TTCAAACCAGCCTCCCTGCTTCTGTGGAACTATAATAAAGACCAGCATCCAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS-3UTR TCA 90 bp | ATTTGGATGCTGGTCTTTATTATAGTTCCACAGAAGCAGGGAGGCTGGTTTGAAATTCTTTTTACCTGTTaGGTCACCTTCAGATTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IWMLVFIIVPQKQGGWFEILFTC*VTFRFR Trigger: TCTGAATCTGAAGGTGACTCAACAGGTAAAAAGAAT...TTCAAACCAGCCTCCCTGCTTCTGTGGAACTATAATAAAGACCAGCATCCAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS-3UTR GCA 90 bp | TTTATTATAGTTCCACAGAAGCAGGGAGGCTGGTTTGAAAGTAGTTTGCTTCCACAAAGGAGCATATCTTaGTTTTGGAGATGGAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: FIIVPQKQGGWFESSLLPQRSIS*FWRWRF Trigger: GAATCTCCATCTCCAAAAGCAAGATATGCTCCTTTG...TGGAAGCAAACTACTTTCAAACCAGCCTCCCTGCTTCTGTGGAACTATAATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS-3UTR CCA 90 bp | TTTATTATAGTTCCACAGAAGCAGGGAGGCTGGTTTGAAAGTAGTTTGCTTCCATCTTGCTTTTGGAGATaGAGATTCCTTGCACTTACA | + |
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Preference number: 4 (lower is better) Translates to: FIIVPQKQGGWFESSLLPSCFWR*RFLALT Trigger: TGTAAGTGCAAGGAATCTCCATCTCCAAAAGCAAGA...TGGAAGCAAACTACTTTCAAACCAGCCTCCCTGCTTCTGTGGAACTATAATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS-3UTR TCA 90 bp | TTTATTATAGTTCCACAGAAGCAGGGAGGCTGGTTTGAAAGTAGTTTGCTTCCACAGATTTACTACACATaGGCTTATTTTTCCCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: FIIVPQKQGGWFESSLLPQIYYT*AYFSPE Trigger: TTCAGGGGAAAAATAAGCTCATGTGTAGTAAATCTG...TGGAAGCAAACTACTTTCAAACCAGCCTCCCTGCTTCTGTGGAACTATAATAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS-3UTR TCA 90 bp | TTTATTATAGTTCCACAGAAGCAGGGAGGCTGGTTTGAAAGTAGTTTGCTTCCATTTTGGATAATGATCTaGATCCTCTTCTCATTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FIIVPQKQGGWFESSLLPFWIMI*ILFSFL Trigger: CAGGAATGAGAAGAGGATTCAGATCATTATCCAAAA...TGGAAGCAAACTACTTTCAAACCAGCCTCCCTGCTTCTGTGGAACTATAATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS-3UTR CCA 90 bp | ATTTGGATGCTGGTCTTTATTATAGTTCCACAGAAGCAGGGAGGCTGGTTTGAATCTCTTCTTTTTATCTaGCATAGGTGTTTTGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: IWMLVFIIVPQKQGGWFESLLFI*HRCFGK Trigger: TTTCCCAAAACACCTATGCCAGATAAAAAGAAGAGA...TTCAAACCAGCCTCCCTGCTTCTGTGGAACTATAATAAAGACCAGCATCCAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS GCA 90 bp | GAGCAGTTTATGAATCCACTCCACTCCAGGCAAAGGAGCATATCTTaGTTTTGGAGATGGAGATTCCTTGCACTTACAGACATGCACAGG | + |
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Preference number: 5 (lower is better) Translates to: EQFMNPLHSRQRSIS*FWRWRFLALTDMHR Trigger: CCTGTGCATGTCTGTAAGTGCAAGGAATCTCCATCTCCAAAAGCAAGATATGCTCCTTTGCCTGGAGTGGAGTGGATTCATAAACTGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS GCA 90 bp | GCATATCTTGCTTTTGGAGATGGAGATTCCTTGCACTTACAGACATaGACAGGCTTAGGTGATGCTCTAAAAGGCTCACAAGGAGGGAAA | + |
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Preference number: 5 (lower is better) Translates to: AYLAFGDGDSLHLQT*TGLGDALKGSQGGK Trigger: TTTCCCTCCTTGTGAGCCTTTTAGAGCATCACCTAAGCCTGTGCATGTCTGTAAGTGCAAGGAATCTCCATCTCCAAAAGCAAGATATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS CCA 90 bp | TTTATGAATCCACTCCACTCCAGGCAAAGGAGCATATCTTGCTTTTaGAGATGGAGATTCCTTGCACTTACAGACATGCACAGGCTTAGG | + |
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Preference number: 5 (lower is better) Translates to: FMNPLHSRQRSISCF*RWRFLALTDMHRLR Trigger: CCTAAGCCTGTGCATGTCTGTAAGTGCAAGGAATCTCCATCTCCAAAAGCAAGATATGCTCCTTTGCCTGGAGTGGAGTGGATTCATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS-3UTR CAA 90 bp | ATTTGGATGCTGGTCTTTATTATAGTTCCACAGAAGCAGGGAGGCTGGTTTGAAGTATTGGGATTGTCCTaGCAACATGTGGCTGCATTC | + |
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Preference number: 5 (lower is better) Translates to: IWMLVFIIVPQKQGGWFEVLGLS*QHVAAF Trigger: GAATGCAGCCACATGTTGCAAGGACAATCCCAATAC...TTCAAACCAGCCTCCCTGCTTCTGTGGAACTATAATAAAGACCAGCATCCAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS-3UTR CAA 90 bp | TGGATGCTGGTCTTTATTATAGTTCCACAGAAGCAGGGAGGCTGGTTTGAAAGTGTCGACAGGAAGAACTaGAAGTTTGAACATCTTCAA | + |
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Preference number: 5 (lower is better) Translates to: WMLVFIIVPQKQGGWFESVDRKN*KFEHLQ Trigger: TTGAAGATGTTCAAACTTCAAGTTCTTCCTGTCGAC...ACTTTCAAACCAGCCTCCCTGCTTCTGTGGAACTATAATAAAGACCAGCATCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS-3UTR CAA 90 bp | TGGATGCTGGTCTTTATTATAGTTCCACAGAAGCAGGGAGGCTGGTTTGAAAGTATATTTGAATGGAGCTaGTGTAATAAACGGCCGAGA | + |
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Preference number: 5 (lower is better) Translates to: WMLVFIIVPQKQGGWFESIFEWS*CNKRPR Trigger: TCTCGGCCGTTTATTACACAAGCTCCATTCAAATAT...ACTTTCAAACCAGCCTCCCTGCTTCTGTGGAACTATAATAAAGACCAGCATCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS-3UTR CAA 90 bp | TGGATGCTGGTCTTTATTATAGTTCCACAGAAGCAGGGAGGCTGGTTTGAAAGTTTCTTAGAGTCTGTATaGGGATTGTCCTTGCAACAT | + |
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Preference number: 5 (lower is better) Translates to: WMLVFIIVPQKQGGWFESFLESV*GLSLQH Trigger: ATGTTGCAAGGACAATCCCAATACAGACTCTAAGAA...ACTTTCAAACCAGCCTCCCTGCTTCTGTGGAACTATAATAAAGACCAGCATCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS-3UTR CAA 90 bp | TGGATGCTGGTCTTTATTATAGTTCCACAGAAGCAGGGAGGCTGGTTTGAAAGTTCTGTGAGCAATTTGTaGACCATACATCCAAATCTG | + |
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Preference number: 5 (lower is better) Translates to: WMLVFIIVPQKQGGWFESSVSNL*TIHPNL Trigger: CAGATTTGGATGTATGGTCAACAAATTGCTCACAGA...ACTTTCAAACCAGCCTCCCTGCTTCTGTGGAACTATAATAAAGACCAGCATCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS-3UTR CAA 90 bp | TTTATTATAGTTCCACAGAAGCAGGGAGGCTGGTTTGAAAGTAGTTTGCTTCCATCTTTCCCTCTTTCTTaGCATCTTTTGAGCCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: FIIVPQKQGGWFESSLLPSFPLS*HLLSLQ Trigger: CTGGAGGCTCAAAAGATGCAAAGAAAGAGGGAAAGA...TGGAAGCAAACTACTTTCAAACCAGCCTCCCTGCTTCTGTGGAACTATAATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS-3UTR CAA 90 bp | TGGATGCTGGTCTTTATTATAGTTCCACAGAAGCAGGGAGGCTGGTTTGAAAGTCTTTCTTGCTCTTCTTaGATGATGCATCTGATTCAG | + |
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Preference number: 5 (lower is better) Translates to: WMLVFIIVPQKQGGWFESLSCSS*MMHLIQ Trigger: CTGAATCAGATGCATCATCAAAGAAGAGCAAGAAAG...ACTTTCAAACCAGCCTCCCTGCTTCTGTGGAACTATAATAAAGACCAGCATCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS-3UTR CAA 90 bp | TTTATTATAGTTCCACAGAAGCAGGGAGGCTGGTTTGAAAGTAGTTTGCTTCCAAAGGTAGTCTTTCTCTaGATGAAGGGATTCTACCGG | + |
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Preference number: 5 (lower is better) Translates to: FIIVPQKQGGWFESSLLPKVVFL*MKGFYR Trigger: CCGGTAGAATCCCTTCATCAAGAGAAAGACTACCTT...TGGAAGCAAACTACTTTCAAACCAGCCTCCCTGCTTCTGTGGAACTATAATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS-3UTR CAA 90 bp | TTTATTATAGTTCCACAGAAGCAGGGAGGCTGGTTTGAAAGTAGTTTGCTTCCAGAGCATATCTTGCTTTaGGAGATGGAGATTCCTTGC | + |
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Preference number: 5 (lower is better) Translates to: FIIVPQKQGGWFESSLLPEHILL*EMEIPC Trigger: GCAAGGAATCTCCATCTCCAAAAGCAAGATATGCTC...TGGAAGCAAACTACTTTCAAACCAGCCTCCCTGCTTCTGTGGAACTATAATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS-3UTR CAA 90 bp | ATTTGGATGCTGGTCTTTATTATAGTTCCACAGAAGCAGGGAGGCTGGTTTGAAGCAAAGGAGCATATCTaGCTTTTGGAGATGGAGATT | + |
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Preference number: 5 (lower is better) Translates to: IWMLVFIIVPQKQGGWFEAKEHI*LLEMEI Trigger: AATCTCCATCTCCAAAAGCAAGATATGCTCCTTTGC...TTCAAACCAGCCTCCCTGCTTCTGTGGAACTATAATAAAGACCAGCATCCAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS-3UTR CAA 90 bp | TGGATGCTGGTCTTTATTATAGTTCCACAGAAGCAGGGAGGCTGGTTTGAAAGTTTATCCATACGTGAGTaGGTTTCTGATCTTTCTCAA | + |
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Preference number: 5 (lower is better) Translates to: WMLVFIIVPQKQGGWFESLSIRE*VSDLSQ Trigger: TTGAGAAAGATCAGAAACCAACTCACGTATGGATAA...ACTTTCAAACCAGCCTCCCTGCTTCTGTGGAACTATAATAAAGACCAGCATCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS-3UTR CAA 90 bp | TGGATGCTGGTCTTTATTATAGTTCCACAGAAGCAGGGAGGCTGGTTTGAAAGTCTTCTTTCATCATTTTaGGACTTTCTACTTTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: WMLVFIIVPQKQGGWFESLLSSF*DFLLSA Trigger: GGCAGAAAGTAGAAAGTCCAAAAATGATGAAAGAAG...ACTTTCAAACCAGCCTCCCTGCTTCTGTGGAACTATAATAAAGACCAGCATCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS-3UTR CAA 90 bp | TTTATTATAGTTCCACAGAAGCAGGGAGGCTGGTTTGAAAGTAGTTTGCTTCCATCTGGCATAGGTGTTTaGGGAAATGTCAAAACAAAA | + |
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Preference number: 5 (lower is better) Translates to: FIIVPQKQGGWFESSLLPSGIGV*GNVKTK Trigger: TTTTGTTTTGACATTTCCCAAAACACCTATGCCAGA...TGGAAGCAAACTACTTTCAAACCAGCCTCCCTGCTTCTGTGGAACTATAATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS-3UTR CAA 90 bp | TTTATTATAGTTCCACAGAAGCAGGGAGGCTGGTTTGAAAGTAGTTTGCTTCCATGTTCTGTGAGCAATTaGTTGACCATACATCCAAAT | + |
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Preference number: 5 (lower is better) Translates to: FIIVPQKQGGWFESSLLPCSVSN*LTIHPN Trigger: ATTTGGATGTATGGTCAACAAATTGCTCACAGAACA...TGGAAGCAAACTACTTTCAAACCAGCCTCCCTGCTTCTGTGGAACTATAATAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS-3UTR CAA 90 bp | TTTATTATAGTTCCACAGAAGCAGGGAGGCTGGTTTGAAAGTAGTTTGCTTCCAAAAGGCTTCTTTGCATaGTTCTGTGAGCAATTTGTT | + |
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Preference number: 5 (lower is better) Translates to: FIIVPQKQGGWFESSLLPKGFFA*FCEQFV Trigger: AACAAATTGCTCACAGAACAATGCAAAGAAGCCTTT...TGGAAGCAAACTACTTTCAAACCAGCCTCCCTGCTTCTGTGGAACTATAATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS-3UTR CAA 90 bp | TTTATTATAGTTCCACAGAAGCAGGGAGGCTGGTTTGAAAGTAGTTTGCTTCCACTTTCTTTGCATCTTTaGAGCCTCCAGAATCAATAT | + |
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Preference number: 5 (lower is better) Translates to: FIIVPQKQGGWFESSLLPLSLHL*SLQNQY Trigger: ATATTGATTCTGGAGGCTCAAAAGATGCAAAGAAAG...TGGAAGCAAACTACTTTCAAACCAGCCTCCCTGCTTCTGTGGAACTATAATAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS CCA 72 bp | CCACTCCACTCCAGGCAAAGGAGCATATCTTGCTTTTaGAGATGGAGATTCCTTGCACTTACAGACATGCAC | + |
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Preference number: 6 (lower is better) Translates to: PLHSRQRSISCF*RWRFLALTDMH Trigger: GTGCATGTCTGTAAGTGCAAGGAATCTCCATCTCCAAAAGCAAGATATGCTCCTTTGCCTGGAGTGGAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS CAA 90 bp | ACTCCAGGCAAAGGAGCATATCTTGCTTTTGGAGATGGAGATTCCTaGCACTTACAGACATGCACAGGCTTAGGTGATGCTCTAAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: TPGKGAYLAFGDGDS*HLQTCTGLGDALKG Trigger: GCCTTTTAGAGCATCACCTAAGCCTGTGCATGTCTGTAAGTGCAAGGAATCTCCATCTCCAAAAGCAAGATATGCTCCTTTGCCTGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS CCA 72 bp | CACTCCAGGCAAAGGAGCATATCTTGCTTTTGGAGATaGAGATTCCTTGCACTTACAGACATGCACAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: HSRQRSISCFWR*RFLALTDMHRL Trigger: AAGCCTGTGCATGTCTGTAAGTGCAAGGAATCTCCATCTCCAAAAGCAAGATATGCTCCTTTGCCTGGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS CAA 90 bp | AGAGCAGTTTATGAATCCACTCCACTCCAGGCAAAGGAGCATATCTaGCTTTTGGAGATGGAGATTCCTTGCACTTACAGACATGCACAG | + |
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Preference number: 6 (lower is better) Translates to: RAVYESTPLQAKEHI*LLEMEIPCTYRHAQ Trigger: CTGTGCATGTCTGTAAGTGCAAGGAATCTCCATCTCCAAAAGCAAGATATGCTCCTTTGCCTGGAGTGGAGTGGATTCATAAACTGCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS CCA 72 bp | CTCTTCTCATTCCTGGCATTCCCGTCTTGGAGTCTGTaGATGAGGCCTCTGAATCATCAGTTGACTTTAAAA | + |
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Preference number: 6 (lower is better) Translates to: LFSFLAFPSWSL*MRPLNHQLTLK Trigger: TTTTAAAGTCAACTGATGATTCAGAGGCCTCATCCACAGACTCCAAGACGGGAATGCCAGGAATGAGAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS CAA 72 bp | TCAACACTCTTCTTAGAGTCTGTATTGGGATTGTCCTaGCAACATGTGGCTGCATTCCCCTTCAGAACAAAG | + |
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Preference number: 6 (lower is better) Translates to: STLFLESVLGLS*QHVAAFPFRTK Trigger: CTTTGTTCTGAAGGGGAATGCAGCCACATGTTGCAAGGACAATCCCAATACAGACTCTAAGAAGAGTGTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS CAA 72 bp | AAAGGAGCATATCTTGCTTTTGGAGATGGAGATTCCTaGCACTTACAGACATGCACAGGCTTAGGTGATGCT | + |
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Preference number: 6 (lower is better) Translates to: KGAYLAFGDGDS*HLQTCTGLGDA Trigger: AGCATCACCTAAGCCTGTGCATGTCTGTAAGTGCAAGGAATCTCCATCTCCAAAAGCAAGATATGCTCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS CAA 72 bp | AATTCTTCAACACTCTTCTTAGAGTCTGTATTGGGATaGTCCTTGCAACATGTGGCTGCATTCCCCTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: NSSTLFLESVLG*SLQHVAAFPFR Trigger: TCTGAAGGGGAATGCAGCCACATGTTGCAAGGACAATCCCAATACAGACTCTAAGAAGAGTGTTGAAGAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS CAA 90 bp | TATCTGAGTCCCTTTCCTTCTTTCCTCCCGTCTTTAAAGGCTTCTTaGCATTGTTCTGTGAGCAATTTGTTGACCATACATCCAAATCTG | + |
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Preference number: 6 (lower is better) Translates to: YLSPFPSFLPSLKAS*HCSVSNLLTIHPNL Trigger: CAGATTTGGATGTATGGTCAACAAATTGCTCACAGAACAATGCAAAGAAGCCTTTAAAGACGGGAGGAAAGAAGGAAAGGGACTCAGATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS CAA 72 bp | TCCTTCTTTCCTCCCGTCTTTAAAGGCTTCTTTGCATaGTTCTGTGAGCAATTTGTTGACCATACATCCAAA | + |
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Preference number: 6 (lower is better) Translates to: SFFPPVFKGFFA*FCEQFVDHTSK Trigger: TTTGGATGTATGGTCAACAAATTGCTCACAGAACAATGCAAAGAAGCCTTTAAAGACGGGAGGAAAGAAGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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| CDS TCA 72 bp | GGTTATTGTTCTCATGGGCTCCAGATTTACTACACATaGGCTTATTTTTCCCCTGAACTTTATCTTCAAAGT | + |
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Preference number: 6 (lower is better) Translates to: GYCSHGLQIYYT*AYFSPELYLQS Trigger: ACTTTGAAGATAAAGTTCAGGGGAAAAATAAGCTCATGTGTAGTAAATCTGGAGCCCATGAGAACAATAACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210720.3 |
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