Pregenerated sensors for CYGB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020810Ensembl transcript IDs: ENSMUST00000021166.6
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTGTGAGGACAGCCCCCGTCCTGTGGCCTGGCTGCTGTCTGAAGTaGGCAGGTGAGGCTGACATTCTAGGGCTCCACACTGAGGCTGCC | + |
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Preference number: 1 (lower is better) Translates to: GVRTAPVLWPGCCLK*AGEADILGLHTEAA Trigger: GGCAGCCTCAGTGTGGAGCCCTAGAATGTCAGCCTCACCTGCTCACTTCAGACAGCAGCCAGGCCACAGGACGGGGGCTGTCCTCACACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| 3UTR CCA 90 bp | GAGCTGCCCAGAAAGATGGCCAGGACTCTTCTGGCCTCCCACGGCTaGGCAAGACCTAGGCTTCTGGGCCTGCAGGCGCACTCGATAGAT | + |
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Preference number: 1 (lower is better) Translates to: ELPRKMARTLLASHG*ARPRLLGLQAHSID Trigger: ATCTATCGAGTGCGCCTGCAGGCCCAGAAGCCTAGGTCTTGCCCAGCCGTGGGAGGCCAGAAGAGTCCTGGCCATCTTTCTGGGCAGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| 3UTR CCA 90 bp | AGGCCTCCTTTCGGGAAGTCGAGTCAGGGGTTCCTCCAGCTTCCTTaGCACCCAGAAATGGAAGGTCAATGCGTGTCTTCAGAAGTCGGC | + |
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Preference number: 1 (lower is better) Translates to: RPPFGKSSQGFLQLP*HPEMEGQCVSSEVG Trigger: GCCGACTTCTGAAGACACGCATTGACCTTCCATTTCTGGGTGCCAAGGAAGCTGGAGGAACCCCTGACTCGACTTCCCGAAAGGAGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| 3UTR CCA 90 bp | GGAAGTCGAGTCAGGGGTTCCTCCAGCTTCCTTGGCACCCAGAAATaGAAGGTCAATGCGTGTCTTCAGAAGTCGGCCTTCTGCCCAAAG | + |
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Preference number: 1 (lower is better) Translates to: GSRVRGSSSFLGTQK*KVNACLQKSAFCPK Trigger: CTTTGGGCAGAAGGCCGACTTCTGAAGACACGCATTGACCTTCCATTTCTGGGTGCCAAGGAAGCTGGAGGAACCCCTGACTCGACTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| 3UTR TCA 90 bp | GGCACGGTAGCCACAGCAGTAAGACATCTTCCAGGACAGTACACGTaGCCAAGGGGTACACACGGGGTTCCCAGCAATGTTAAGGAGACT | + |
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Preference number: 1 (lower is better) Translates to: GTVATAVRHLPGQYT*PRGTHGVPSNVKET Trigger: AGTCTCCTTAACATTGCTGGGAACCCCGTGTGTACCCCTTGGTCACGTGTACTGTCCTGGAAGATGTCTTACTGCTGTGGCTACCGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| 3UTR TCA 90 bp | CATATACCGGACACATACACTGGCCAACATCCCATTGGGATCTCCTaGACTCTTGGTGTGTGCCCTGATCCTTGCCCTTTCCAGGACAAG | + |
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Preference number: 1 (lower is better) Translates to: HIPDTYTGQHPIGIS*TLGVCPDPCPFQDK Trigger: CTTGTCCTGGAAAGGGCAAGGATCAGGGCACACACCAAGAGTTCAGGAGATCCCAATGGGATGTTGGCCAGTGTATGTGTCCGGTATATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| 3UTR-3UTR TCA 90 bp | CAGGACAGTACACGTGACCAAGGGGTACACACGGGGTTCCCAGCAATGTTAAGGTCTAGGGCTCCACACTaGGGCTGCCCCTCACCCCCA | + |
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Preference number: 2 (lower is better) Translates to: QDSTRDQGVHTGFPAMLRSRAPH*GCPSPP Trigger: TGGGGGTGAGGGGCAGCCTCAGTGTGGAGCCCTAGA...CCTTAACATTGCTGGGAACCCCGTGTGTACCCCTTGGTCACGTGTACTGTCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| 3UTR-3UTR CCA 90 bp | CAGGACAGTACACGTGACCAAGGGGTACACACGGGGTTCCCAGCAATGTTAAGGACAGCCCCCGTCCTGTaGCCTGGCTGCTGTCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: QDSTRDQGVHTGFPAMLRTAPVL*PGCCLK Trigger: CTTCAGACAGCAGCCAGGCCACAGGACGGGGGCTGT...CCTTAACATTGCTGGGAACCCCGTGTGTACCCCTTGGTCACGTGTACTGTCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| 3UTR-3UTR GCA 90 bp | GGGTTCCCAGCAATGTTAAGGAGACTATGTGGAGAGGGTGAGCAGGTGGCCCCACAGAAGTCGGCCTTCTaGCCAAAGTGCTGCCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: GFPAMLRRLCGEGEQVAPQKSAF*PKCCQG Trigger: TCCCTGGCAGCACTTTGGGCAGAAGGCCGACTTCTG...TGGGGCCACCTGCTCACCCTCTCCACATAGTCTCCTTAACATTGCTGGGAACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| 3UTR-3UTR GCA 90 bp | GGGTTCCCAGCAATGTTAAGGAGACTATGTGGAGAGGGTGAGCAGGTGGCCCCACTCCTCTTGTGCTGTTaGCAGCTTTCACCCTGCTCC | + |
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Preference number: 2 (lower is better) Translates to: GFPAMLRRLCGEGEQVAPLLLCC*QLSPCS Trigger: GGAGCAGGGTGAAAGCTGGCAACAGCACAAGAGGAG...TGGGGCCACCTGCTCACCCTCTCCACATAGTCTCCTTAACATTGCTGGGAACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| 3UTR-3UTR GCA 90 bp | CCAGCAATGTTAAGGAGACTATGTGGAGAGGGTGAGCAGGTGGCCCCAGAGGAGGTGTGCCCTGATCCTTaGCCTTTCCAGGACAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: PAMLRRLCGEGEQVAPEEVCPDP*PFQDKP Trigger: TGGCTTGTCCTGGAAAGGGCAAGGATCAGGGCACAC...CTCCTCTGGGGCCACCTGCTCACCCTCTCCACATAGTCTCCTTAACATTGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| 3UTR-3UTR TCA 90 bp | CAGGACAGTACACGTGACCAAGGGGTACACACGGGGTTCCCAGCAATGTTAAGGTCTTGGTGTGTGCCCTaGTCCTTGCCCTTTCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: QDSTRDQGVHTGFPAMLRSWCVP*SLPFPG Trigger: TCCTGGAAAGGGCAAGGATCAGGGCACACACCAAGA...CCTTAACATTGCTGGGAACCCCGTGTGTACCCCTTGGTCACGTGTACTGTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| 3UTR CAA 90 bp | CGGACACATACACTGGCCAACATCCCATTGGGATCTCCTGAACTCTaGGTGTGTGCCCTGATCCTTGCCCTTTCCAGGACAAGCCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: RTHTLANIPLGSPEL*VCALILALSRTSQS Trigger: TGACTGGCTTGTCCTGGAAAGGGCAAGGATCAGGGCACACACCAAGAGTTCAGGAGATCCCAATGGGATGTTGGCCAGTGTATGTGTCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| 3UTR-3UTR GCA 90 bp | TTCCCAGCAATGTTAAGGAGACTATGTGGAGAGGGTGAGCAGGTGGCCCCAGAGAAGCTAAGAAGAGTGTaGCCCTGCTGTGAGGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: FPAMLRRLCGEGEQVAPEKLRRV*PCCEAE Trigger: CTCTGCCTCACAGCAGGGGCACACTCTTCTTAGCTT...CTCTGGGGCCACCTGCTCACCCTCTCCACATAGTCTCCTTAACATTGCTGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| 3UTR-3UTR TCA 90 bp | TTCCCAGCAATGTTAAGGAGACTATGTGGAGAGGGTGAGCAGGTGGCCCCAGAGGGGATAGTTCCTTTCTaGAGTGACTCACGGGCTTGT | + |
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Preference number: 2 (lower is better) Translates to: FPAMLRRLCGEGEQVAPEGIVPF*SDSRAC Trigger: ACAAGCCCGTGAGTCACTTCAGAAAGGAACTATCCC...CTCTGGGGCCACCTGCTCACCCTCTCCACATAGTCTCCTTAACATTGCTGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| 3UTR-3UTR GCA 90 bp | TTACAAACATCAGAAACTACAAAAGACAGGCAGTTACAGGAAGGCTGTGCGAGGTGGCCCCTCCTCTTGTaGTGTTGCCAGCTTTCACCC | + |
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Preference number: 2 (lower is better) Translates to: LQTSETTKDRQLQEGCARWPLLL*CCQLSP Trigger: GGGTGAAAGCTGGCAACAGCACAAGAGGAGGGGCCA...CCTCGCACAGCCTTCCTGTAACTGCCTGTCTTTTGTAGTTTCTGATGTTTGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| 3UTR-3UTR CCA 90 bp | TTACAAACATCAGAAACTACAAAAGACAGGCAGTTACAGGAAGGCTGTGCGAGGCTTGGCACCCAGAAATaGAAGGTCAATGCGTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: LQTSETTKDRQLQEGCARLGTQK*KVNACL Trigger: AAGACACGCATTGACCTTCCATTTCTGGGTGCCAAG...CCTCGCACAGCCTTCCTGTAACTGCCTGTCTTTTGTAGTTTCTGATGTTTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| 3UTR CCA 72 bp | CAAAAGACAGGCAGTTACAGGAAGGCTGTGCGAGGGTaGGACCAGAGGGGACGCAGGCACGGTAGCCACAGC | + |
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Preference number: 3 (lower is better) Translates to: QKTGSYRKAVRG*DQRGRRHGSHS Trigger: GCTGTGGCTACCGTGCCTGCGTCCCCTCTGGTCCCACCCTCGCACAGCCTTCCTGTAACTGCCTGTCTTTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| 3UTR TCA 72 bp | GCTGGCGGGCAGAGTGAAGCAGGGATAGTTCCTTTCTaGAGTGACTCACGGGCTTGTCCTCGCTTCCCACCG | + |
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Preference number: 3 (lower is better) Translates to: AGGQSEAGIVPF*SDSRACPRFPP Trigger: CGGTGGGAAGCGAGGACAAGCCCGTGAGTCACTTCAGAAAGGAACTATCCCTGCTTCACTCTGCCCGCCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| 3UTR-3UTR CAA 90 bp | GTGTGTGCCCTGATCCTTGCCCTTTCCAGGACAAGCCAGTCAGGCAAACCCTTGACCTGGCCCCTCCTCTaGTGCTGTTGCCAGCTTTCA | + |
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Preference number: 3 (lower is better) Translates to: VCALILALSRTSQSGKPLTWPLL*CCCQLS Trigger: TGAAAGCTGGCAACAGCACAAGAGGAGGGGCCAGGT...CAAGGGTTTGCCTGACTGGCTTGTCCTGGAAAGGGCAAGGATCAGGGCACACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| 3UTR CCA 72 bp | CCCTCACCCCCACCCCCATATACCGGACACATACACTaGCCAACATCCCATTGGGATCTCCTGAACTCTTGG | + |
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Preference number: 3 (lower is better) Translates to: PSPPPPYTGHIH*PTSHWDLLNSW Trigger: CCAAGAGTTCAGGAGATCCCAATGGGATGTTGGCCAGTGTATGTGTCCGGTATATGGGGGTGGGGGTGAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| 3UTR TCA 72 bp | TCCCATTGGGATCTCCTGAACTCTTGGTGTGTGCCCTaGTCCTTGCCCTTTCCAGGACAAGCCAGTCAGGCA | + |
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Preference number: 3 (lower is better) Translates to: SHWDLLNSWCVP*SLPFPGQASQA Trigger: TGCCTGACTGGCTTGTCCTGGAAAGGGCAAGGATCAGGGCACACACCAAGAGTTCAGGAGATCCCAATGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| 3UTR CCA 72 bp | GTCAGGGGTTCCTCCAGCTTCCTTGGCACCCAGAAATaGAAGGTCAATGCGTGTCTTCAGAAGTCGGCCTTC | + |
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Preference number: 3 (lower is better) Translates to: VRGSSSFLGTQK*KVNACLQKSAF Trigger: GAAGGCCGACTTCTGAAGACACGCATTGACCTTCCATTTCTGGGTGCCAAGGAAGCTGGAGGAACCCCTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| 3UTR TCA 72 bp | GCCACAGCAGTAAGACATCTTCCAGGACAGTACACGTaGCCAAGGGGTACACACGGGGTTCCCAGCAATGTT | + |
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Preference number: 3 (lower is better) Translates to: ATAVRHLPGQYT*PRGTHGVPSNV Trigger: AACATTGCTGGGAACCCCGTGTGTACCCCTTGGTCACGTGTACTGTCCTGGAAGATGTCTTACTGCTGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| 3UTR CCA 72 bp | TTCGGGAAGTCGAGTCAGGGGTTCCTCCAGCTTCCTTaGCACCCAGAAATGGAAGGTCAATGCGTGTCTTCA | + |
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Preference number: 3 (lower is better) Translates to: FGKSSQGFLQLP*HPEMEGQCVSS Trigger: TGAAGACACGCATTGACCTTCCATTTCTGGGTGCCAAGGAAGCTGGAGGAACCCCTGACTCGACTTCCCGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS-3UTR TCA 90 bp | GCCATGATGAAGGCCTCCTTTCGGGAAGTCGAGTCAGGGGTTCCTCCAGCTTCCCGGGCCCACGTAGCCTaGACCGCCTTCCTCTCCGCC | + |
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Preference number: 4 (lower is better) Translates to: AMMKASFREVESGVPPASRAHVA*TAFLSA Trigger: GGCGGAGAGGAAGGCGGTTCAGGCTACGTGGGCCCG...GGAAGCTGGAGGAACCCCTGACTCGACTTCCCGAAAGGAGGCCTTCATCATGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS-3UTR GCA 90 bp | TGTCCTCGCTTCCCACCGGCCACTTTGCCAGGTCCCTCTCTAACAGTCAGTAGAATGACCCGGCAGGCGTaGTTCCGCAGCTGGGGACTC | + |
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Preference number: 4 (lower is better) Translates to: CPRFPPATLPGPSLTVSRMTRQA*FRSWGL Trigger: GAGTCCCCAGCTGCGGAAGCACGCCTGCCGGGTCAT...TCTACTGACTGTTAGAGAGGGACCTGGCAAAGTGGCCGGTGGGAAGCGAGGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS-3UTR CCA 90 bp | GTGTGTGCCCTGATCCTTGCCCTTTCCAGGACAAGCCAGTCAGGCAAACCCTTGTTGTGCTTGAGGGCGTaGGCCTTGCCGACCAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: VCALILALSRTSQSGKPLLCLRA*ALPTRA Trigger: CGCCCTGGTCGGCAAGGCCCACGCCCTCAAGCACAA...CAAGGGTTTGCCTGACTGGCTTGTCCTGGAAAGGGCAAGGATCAGGGCACACAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS-3UTR TCA 90 bp | GTGTGTGCCCTGATCCTTGCCCTTTCCAGGACAAGCCAGTCAGGCAAACCCTTGGTTCCACCTTGTGCTTaGGGGCGTGGGCCTTGCCGA | + |
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Preference number: 4 (lower is better) Translates to: VCALILALSRTSQSGKPLVPPCA*GRGPCR Trigger: TCGGCAAGGCCCACGCCCTCAAGCACAAGGTGGAAC...CAAGGGTTTGCCTGACTGGCTTGTCCTGGAAAGGGCAAGGATCAGGGCACACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS-3UTR TCA 90 bp | CCAGCAATGTTAAGGAGACTATGTGGAGAGGGTGAGCAGGTGGCCCCAGAGGAGTCACGTGGCTGTAGATaGGACCCCGCAGCTTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: PAMLRRLCGEGEQVAPEESRGCR*DPAAWP Trigger: GGGCCAAGCTGCGGGGTCTCATCTACAGCCACGTGA...CTCCTCTGGGGCCACCTGCTCACCCTCTCCACATAGTCTCCTTAACATTGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS-3UTR CCA 90 bp | AAGGTCAATGCGTGTCTTCAGAAGTCGGCCTTCTGCCCAAAGTGCTGCCAGGGACCACGTCCTCGCAGTTaGCATACAGCCGGGCCCACG | + |
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Preference number: 4 (lower is better) Translates to: KVNACLQKSAFCPKCCQGPRPRS*HTAGPT Trigger: CGTGGGCCCGGCTGTATGCCAACTGCGAGGACGTGG...TCCCTGGCAGCACTTTGGGCAGAAGGCCGACTTCTGAAGACACGCATTGACCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS-3UTR CCA 90 bp | GGGTTCCCAGCAATGTTAAGGAGACTATGTGGAGAGGGTGAGCAGGTGGCCCCAAGAACCTCACCAGGATaGCCACCCCCACGTCCTCGC | + |
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Preference number: 4 (lower is better) Translates to: GFPAMLRRLCGEGEQVAPRTSPG*PPPRPR Trigger: GCGAGGACGTGGGGGTGGCCATCCTGGTGAGGTTCT...TGGGGCCACCTGCTCACCCTCTCCACATAGTCTCCTTAACATTGCTGGGAACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS-3UTR CCA 90 bp | GAAGGTCAATGCGTGTCTTCAGAAGTCGGCCTTCTGCCCAAAGTGCTGCCAGGGGTGGGGTGGTGGTGTTaGGGACCTGCTGTACCCAGC | + |
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Preference number: 4 (lower is better) Translates to: EGQCVSSEVGLLPKVLPGVGWWC*GPAVPS Trigger: GCTGGGTACAGCAGGTCCCCAACACCACCACCCCAC...CCCTGGCAGCACTTTGGGCAGAAGGCCGACTTCTGAAGACACGCATTGACCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS-3UTR GCA 90 bp | GCAGAGGGATTCCCCTCTGCTAGATTCAGCATCCAGGGATCCAGCCCCACCTCCATAGGTTCCACCTTGTaGTTGAGGGCGTGGGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: AEGFPSARFSIQGSSPTSIGSTL*LRAWAL Trigger: CAAGGCCCACGCCCTCAAGCACAAGGTGGAACCTAT...GGAGGTGGGGCTGGATCCCTGGATGCTGAATCTAGCAGAGGGGAATCCCTCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS-3UTR CCA 90 bp | AGACCTAGGCTTCTGGGCCTGCAGGCGCACTCGATAGATATGTACGTGTGTGTTGCGTGCTTCCGCAGCTaGGGACTCCTCTCCATCTCC | + |
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Preference number: 4 (lower is better) Translates to: RPRLLGLQAHSIDMYVCVACFRS*GLLSIS Trigger: GGAGATGGAGAGGAGTCCCCAGCTGCGGAAGCACGC...AACACACACGTACATATCTATCGAGTGCGCCTGCAGGCCCAGAAGCCTAGGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS-3UTR CCA 90 bp | CAAGCTCTGGGATTCTCTTGTTTTGTGGGGGTAGGGCAGGAATGCAGGGCACTGTGGCTGGTGGGGTGGTaGTGTTGGGGACCTGCTGTA | + |
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Preference number: 4 (lower is better) Translates to: QALGFSCFVGVGQECRALWLVGW*CWGPAV Trigger: TACAGCAGGTCCCCAACACCACCACCCCACCAGCCA...CAGTGCCCTGCATTCCTGCCCTACCCCCACAAAACAAGAGAATCCCAGAGCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS-3UTR CCA 90 bp | AGACCTAGGCTTCTGGGCCTGCAGGCGCACTCGATAGATATGTACGTGTGTGTTGAGTGGCTGGTGGGGTaGTGGTGTTGGGGACCTGCT | + |
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Preference number: 4 (lower is better) Translates to: RPRLLGLQAHSIDMYVCVEWLVG*WCWGPA Trigger: AGCAGGTCCCCAACACCACCACCCCACCAGCCACTC...AACACACACGTACATATCTATCGAGTGCGCCTGCAGGCCCAGAAGCCTAGGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS-3UTR CCA 90 bp | CAGGACAGTACACGTGACCAAGGGGTACACACGGGGTTCCCAGCAATGTTAAGGCTGAAGAGGGCAGAGTaGCTGGTGGGGTGGTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: QDSTRDQGVHTGFPAMLRLKRAE*LVGWWC Trigger: ACACCACCACCCCACCAGCCACTCTGCCCTCTTCAG...CCTTAACATTGCTGGGAACCCCGTGTGTACCCCTTGGTCACGTGTACTGTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS-3UTR GCA 90 bp | GCCATGATGAAGGCCTCCTTTCGGGAAGTCGAGTCAGGGGTTCCTCCAGCTTCCCACTTCCTTGTAGGCTaGGGTCACGTGGCTGTAGAT | + |
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Preference number: 4 (lower is better) Translates to: AMMKASFREVESGVPPASHFLVG*GHVAVD Trigger: ATCTACAGCCACGTGACCGCAGCCTACAAGGAAGTG...GGAAGCTGGAGGAACCCCTGACTCGACTTCCCGAAAGGAGGCCTTCATCATGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS-3UTR GCA 90 bp | AGACCTAGGCTTCTGGGCCTGCAGGCGCACTCGATAGATATGTACGTGTGTGTTGTGGTGTTGGGGACCTaGTGTACCCAGCCCACTTCC | + |
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Preference number: 4 (lower is better) Translates to: RPRLLGLQAHSIDMYVCVVVLGT*CTQPTS Trigger: GGAAGTGGGCTGGGTACAGCAGGTCCCCAACACCAC...AACACACACGTACATATCTATCGAGTGCGCCTGCAGGCCCAGAAGCCTAGGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| 3UTR CAA 72 bp | GACTCACGGGCTTGTCCTCGCTTCCCACCGGCCACTTaGCCAGGTCCCTCTCTAACAGTCAGTAGAAAAAGC | + |
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Preference number: 4 (lower is better) Translates to: DSRACPRFPPAT*PGPSLTVSRKS Trigger: GCTTTTTCTACTGACTGTTAGAGAGGGACCTGGCAAAGTGGCCGGTGGGAAGCGAGGACAAGCCCGTGAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| 3UTR CAA 72 bp | TTGTCCTTCCTCCGCCTCCCAAGCTCTGGGATTCTCTaGTTTTGTGGGGGTAGGGCAGGAATGCAGGGCACT | + |
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Preference number: 4 (lower is better) Translates to: LSFLRLPSSGIL*FCGGRAGMQGT Trigger: AGTGCCCTGCATTCCTGCCCTACCCCCACAAAACAAGAGAATCCCAGAGCTTGGGAGGCGGAGGAAGGACAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS-3UTR GCA 90 bp | GGGTTCCCAGCAATGTTAAGGAGACTATGTGGAGAGGGTGAGCAGGTGGCCCCAACCTTGTCTGGGTCATaGAGGTTCTCCACGACAGTG | + |
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Preference number: 4 (lower is better) Translates to: GFPAMLRRLCGEGEQVAPTLSGS*RFSTTV Trigger: CACTGTCGTGGAGAACCTGCATGACCCAGACAAGGT...TGGGGCCACCTGCTCACCCTCTCCACATAGTCTCCTTAACATTGCTGGGAACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| 3UTR CAA 72 bp | ACACTGGCCAACATCCCATTGGGATCTCCTGAACTCTaGGTGTGTGCCCTGATCCTTGCCCTTTCCAGGACA | + |
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Preference number: 4 (lower is better) Translates to: TLANIPLGSPEL*VCALILALSRT Trigger: TGTCCTGGAAAGGGCAAGGATCAGGGCACACACCAAGAGTTCAGGAGATCCCAATGGGATGTTGGCCAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS-3UTR CCA 90 bp | CAGGACAGTACACGTGACCAAGGGGTACACACGGGGTTCCCAGCAATGTTAAGGAGAGGATACCTTGTCTaGGTCATGCAGGTTCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: QDSTRDQGVHTGFPAMLRRGYLV*VMQVLH Trigger: GTGGAGAACCTGCATGACCCAGACAAGGTATCCTCT...CCTTAACATTGCTGGGAACCCCGTGTGTACCCCTTGGTCACGTGTACTGTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS-3UTR CCA 90 bp | AAGGTCAATGCGTGTCTTCAGAAGTCGGCCTTCTGCCCAAAGTGCTGCCAGGGACCACAGGGAAGTCATTaGCAAATTCCTCGGCGATCA | + |
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Preference number: 4 (lower is better) Translates to: KVNACLQKSAFCPKCCQGPQGSH*QIPRRS Trigger: TGATCGCCGAGGAATTTGCCAATGACTTCCCTGTGG...TCCCTGGCAGCACTTTGGGCAGAAGGCCGACTTCTGAAGACACGCATTGACCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS-3UTR GCA 90 bp | GCACCCAGAAATGGAAGGTCAATGCGTGTCTTCAGAAGTCGGCCTTCTGCCCAAAACTGGCTGAAGTACTaGTTGGCCGAAGGGAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: APRNGRSMRVFRSRPSAQNWLKY*LAEGKF Trigger: GAACTTCCCTTCGGCCAAGCAGTACTTCAGCCAGTT...TTGGGCAGAAGGCCGACTTCTGAAGACACGCATTGACCTTCCATTTCTGGGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS TCA 90 bp | ACCCCCACGTCCTCGCAGTTGGCATACAGCCGGGCCCACGTAGCCTaGACCGCCTTCCTCTCCGCCTCGGACAGCTCCTCGCTCCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: TPTSSQLAYSRAHVA*TAFLSASDSSSLLS Trigger: GGAGAGGAGCGAGGAGCTGTCCGAGGCGGAGAGGAAGGCGGTTCAGGCTACGTGGGCCCGGCTGTATGCCAACTGCGAGGACGTGGGGGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS GCA 90 bp | AGGTTCTCCACGACAGTGTTGAGGGCCCCCATGACCCGGCAGGCGTaGTTCCGCAGCTGGGGACTCCTCTCCATCTCCAAGGGATCCTCC | + |
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Preference number: 5 (lower is better) Translates to: RFSTTVLRAPMTRQA*FRSWGLLSISKGSS Trigger: GGAGGATCCCTTGGAGATGGAGAGGAGTCCCCAGCTGCGGAAGCACGCCTGCCGGGTCATGGGGGCCCTCAACACTGTCGTGGAGAACCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS GCA 90 bp | GGTGGTGTTGGGGACCTGCTGTACCCAGCCCACTTCCTTGTAGGCTaGGGTCACGTGGCTGTAGATGAGACCCCGCAGCTTGGCCCAGGC | + |
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Preference number: 5 (lower is better) Translates to: GGVGDLLYPAHFLVG*GHVAVDETPQLGPG Trigger: GCCTGGGCCAAGCTGCGGGGTCTCATCTACAGCCACGTGACCGCAGCCTACAAGGAAGTGGGCTGGGTACAGCAGGTCCCCAACACCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS GCA 90 bp | GCCTTGCCGACCAGGGCGAGCACAGAGGATACCTTGTCTGGGTCATaGAGGTTCTCCACGACAGTGTTGAGGGCCCCCATGACCCGGCAG | + |
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Preference number: 5 (lower is better) Translates to: ALPTRASTEDTLSGS*RFSTTVLRAPMTRQ Trigger: CTGCCGGGTCATGGGGGCCCTCAACACTGTCGTGGAGAACCTGCATGACCCAGACAAGGTATCCTCTGTGCTCGCCCTGGTCGGCAAGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS CCA 90 bp | GGCGTGGGCCTTGCCGACCAGGGCGAGCACAGAGGATACCTTGTCTaGGTCATGCAGGTTCTCCACGACAGTGTTGAGGGCCCCCATGAC | + |
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Preference number: 5 (lower is better) Translates to: GVGLADQGEHRGYLV*VMQVLHDSVEGPHD Trigger: GTCATGGGGGCCCTCAACACTGTCGTGGAGAACCTGCATGACCCAGACAAGGTATCCTCTGTGCTCGCCCTGGTCGGCAAGGCCCACGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS-3UTR CAA 90 bp | GCCATGATGAAGGCCTCCTTTCGGGAAGTCGAGTCAGGGGTTCCTCCAGCTTCCCCCACGTCCTCGCAGTaGGCATACAGCCGGGCCCAC | + |
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Preference number: 5 (lower is better) Translates to: AMMKASFREVESGVPPASPTSSQ*AYSRAH Trigger: GTGGGCCCGGCTGTATGCCAACTGCGAGGACGTGGG...GGAAGCTGGAGGAACCCCTGACTCGACTTCCCGAAAGGAGGCCTTCATCATGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS-3UTR CAA 90 bp | GCAGAGGGATTCCCCTCTGCTAGATTCAGCATCCAGGGATCCAGCCCCACCTCCTTCTCCACGACAGTGTaGAGGGCCCCCATGACCCGG | + |
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Preference number: 5 (lower is better) Translates to: AEGFPSARFSIQGSSPTSFSTTV*RAPMTR Trigger: CCGGGTCATGGGGGCCCTCAACACTGTCGTGGAGAA...GGAGGTGGGGCTGGATCCCTGGATGCTGAATCTAGCAGAGGGGAATCCCTCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS-3UTR CAA 90 bp | GCCATGATGAAGGCCTCCTTTCGGGAAGTCGAGTCAGGGGTTCCTCCAGCTTCCGGTTCCACCTTGTGCTaGAGGGCGTGGGCCTTGCCG | + |
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Preference number: 5 (lower is better) Translates to: AMMKASFREVESGVPPASGSTLC*RAWALP Trigger: CGGCAAGGCCCACGCCCTCAAGCACAAGGTGGAACC...GGAAGCTGGAGGAACCCCTGACTCGACTTCCCGAAAGGAGGCCTTCATCATGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS CCA 90 bp | ACAGTGTTGAGGGCCCCCATGACCCGGCAGGCGTGCTTCCGCAGCTaGGGACTCCTCTCCATCTCCAAGGGATCCTCCATGTGTCTAAAC | + |
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Preference number: 5 (lower is better) Translates to: TVLRAPMTRQACFRS*GLLSISKGSSMCLN Trigger: GTTTAGACACATGGAGGATCCCTTGGAGATGGAGAGGAGTCCCCAGCTGCGGAAGCACGCCTGCCGGGTCATGGGGGCCCTCAACACTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS-3UTR CAA 90 bp | GAAGGTCAATGCGTGTCTTCAGAAGTCGGCCTTCTGCCCAAAGTGCTGCCAGGGGGTGGGGTGGTGGTGTaGGGGACCTGCTGTACCCAG | + |
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Preference number: 5 (lower is better) Translates to: EGQCVSSEVGLLPKVLPGGGVVV*GTCCTQ Trigger: CTGGGTACAGCAGGTCCCCAACACCACCACCCCACC...CCCTGGCAGCACTTTGGGCAGAAGGCCGACTTCTGAAGACACGCATTGACCTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS-3UTR CAA 90 bp | GCACCCAGAAATGGAAGGTCAATGCGTGTCTTCAGAAGTCGGCCTTCTGCCCAATTGAGGGCGTGGGCCTaGCCGACCAGGGCGAGCACA | + |
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Preference number: 5 (lower is better) Translates to: APRNGRSMRVFRSRPSAQLRAWA*PTRAST Trigger: TGTGCTCGCCCTGGTCGGCAAGGCCCACGCCCTCAA...TTGGGCAGAAGGCCGACTTCTGAAGACACGCATTGACCTTCCATTTCTGGGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS-3UTR CAA 90 bp | GAAGGTCAATGCGTGTCTTCAGAAGTCGGCCTTCTGCCCAAAGTGCTGCCAGGGTACATAGGTTCCACCTaGTGCTTGAGGGCGTGGGCC | + |
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Preference number: 5 (lower is better) Translates to: EGQCVSSEVGLLPKVLPGYIGST*CLRAWA Trigger: GGCCCACGCCCTCAAGCACAAGGTGGAACCTATGTA...CCCTGGCAGCACTTTGGGCAGAAGGCCGACTTCTGAAGACACGCATTGACCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS-3UTR CAA 90 bp | GCACCCAGAAATGGAAGGTCAATGCGTGTCTTCAGAAGTCGGCCTTCTGCCCAAATGAGACCCCGCAGCTaGGCCCAGGCTTTCTGCGTC | + |
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Preference number: 5 (lower is better) Translates to: APRNGRSMRVFRSRPSAQMRPRS*AQAFCV Trigger: GACGCAGAAAGCCTGGGCCAAGCTGCGGGGTCTCAT...TTGGGCAGAAGGCCGACTTCTGAAGACACGCATTGACCTTCCATTTCTGGGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS CCA 90 bp | GAGAGAATCTTAAAGTACATAGGTTCCACCTTGTGCTTGAGGGCGTaGGCCTTGCCGACCAGGGCGAGCACAGAGGATACCTTGTCTGGG | + |
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Preference number: 5 (lower is better) Translates to: ERILKYIGSTLCLRA*ALPTRASTEDTLSG Trigger: CCCAGACAAGGTATCCTCTGTGCTCGCCCTGGTCGGCAAGGCCCACGCCCTCAAGCACAAGGTGGAACCTATGTACTTTAAGATTCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS-3UTR CAA 90 bp | CCAGCAATGTTAAGGAGACTATGTGGAGAGGGTGAGCAGGTGGCCCCAGAGGAGAGCACAGAGGATACCTaGTCTGGGTCATGCAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: PAMLRRLCGEGEQVAPEESTEDT*SGSCRF Trigger: GAACCTGCATGACCCAGACAAGGTATCCTCTGTGCT...CTCCTCTGGGGCCACCTGCTCACCCTCTCCACATAGTCTCCTTAACATTGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS-3UTR CAA 90 bp | GTGTGTGCCCTGATCCTTGCCCTTTCCAGGACAAGCCAGTCAGGCAAACCCTTGTCCACAGGGAAGTCATaGGCAAATTCCTCGGCGATC | + |
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Preference number: 5 (lower is better) Translates to: VCALILALSRTSQSGKPLSTGKS*ANSSAI Trigger: GATCGCCGAGGAATTTGCCAATGACTTCCCTGTGGA...CAAGGGTTTGCCTGACTGGCTTGTCCTGGAAAGGGCAAGGATCAGGGCACACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS GCA 90 bp | AGAATGACCCCAGAGAGAATCTTAAAGTACATAGGTTCCACCTTGTaGTTGAGGGCGTGGGCCTTGCCGACCAGGGCGAGCACAGAGGAT | + |
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Preference number: 5 (lower is better) Translates to: RMTPERILKYIGSTL*LRAWALPTRASTED Trigger: ATCCTCTGTGCTCGCCCTGGTCGGCAAGGCCCACGCCCTCAAGCACAAGGTGGAACCTATGTACTTTAAGATTCTCTCTGGGGTCATTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS GCA 90 bp | TCCATCTCCAAGGGATCCTCCATGTGTCTAAACTGGCTGAAGTACTaGTTGGCCGAAGGGAAGTTCACAAAGAACCTCACCAGGATGGCC | + |
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Preference number: 5 (lower is better) Translates to: SISKGSSMCLNWLKY*LAEGKFTKNLTRMA Trigger: GGCCATCCTGGTGAGGTTCTTTGTGAACTTCCCTTCGGCCAAGCAGTACTTCAGCCAGTTTAGACACATGGAGGATCCCTTGGAGATGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS-3UTR CAA 90 bp | TTACAAACATCAGAAACTACAAAAGACAGGCAGTTACAGGAAGGCTGTGCGAGGTGGCTGAAGTACTGCTaGGCCGAAGGGAAGTTCACA | + |
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Preference number: 5 (lower is better) Translates to: LQTSETTKDRQLQEGCARWLKYC*AEGKFT Trigger: TGTGAACTTCCCTTCGGCCAAGCAGTACTTCAGCCA...CCTCGCACAGCCTTCCTGTAACTGCCTGTCTTTTGTAGTTTCTGATGTTTGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS GCA 72 bp | ACGACAGTGTTGAGGGCCCCCATGACCCGGCAGGCGTaGTTCCGCAGCTGGGGACTCCTCTCCATCTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: TTVLRAPMTRQA*FRSWGLLSISK Trigger: CTTGGAGATGGAGAGGAGTCCCCAGCTGCGGAAGCACGCCTGCCGGGTCATGGGGGCCCTCAACACTGTCGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS CAA 90 bp | TTGAGGGCGTGGGCCTTGCCGACCAGGGCGAGCACAGAGGATACCTaGTCTGGGTCATGCAGGTTCTCCACGACAGTGTTGAGGGCCCCC | + |
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Preference number: 6 (lower is better) Translates to: LRAWALPTRASTEDT*SGSCRFSTTVLRAP Trigger: GGGGGCCCTCAACACTGTCGTGGAGAACCTGCATGACCCAGACAAGGTATCCTCTGTGCTCGCCCTGGTCGGCAAGGCCCACGCCCTCAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS GCA 72 bp | GGGGACCTGCTGTACCCAGCCCACTTCCTTGTAGGCTaGGGTCACGTGGCTGTAGATGAGACCCCGCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: GDLLYPAHFLVG*GHVAVDETPQL Trigger: AAGCTGCGGGGTCTCATCTACAGCCACGTGACCGCAGCCTACAAGGAAGTGGGCTGGGTACAGCAGGTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS CCA 72 bp | CTGAAGAGGGCAGAGTGGCTGGTGGGGTGGTGGTGTTaGGGACCTGCTGTACCCAGCCCACTTCCTTGTAGG | + |
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Preference number: 6 (lower is better) Translates to: LKRAEWLVGWWC*GPAVPSPLPCR Trigger: CCTACAAGGAAGTGGGCTGGGTACAGCAGGTCCCCAACACCACCACCCCACCAGCCACTCTGCCCTCTTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS GCA 72 bp | ACCAGGGCGAGCACAGAGGATACCTTGTCTGGGTCATaGAGGTTCTCCACGACAGTGTTGAGGGCCCCCATG | + |
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Preference number: 6 (lower is better) Translates to: TRASTEDTLSGS*RFSTTVLRAPM Trigger: CATGGGGGCCCTCAACACTGTCGTGGAGAACCTGCATGACCCAGACAAGGTATCCTCTGTGCTCGCCCTGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS CCA 72 bp | CTTGCCGACCAGGGCGAGCACAGAGGATACCTTGTCTaGGTCATGCAGGTTCTCCACGACAGTGTTGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: LADQGEHRGYLV*VMQVLHDSVEG Trigger: GCCCTCAACACTGTCGTGGAGAACCTGCATGACCCAGACAAGGTATCCTCTGTGCTCGCCCTGGTCGGCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS CAA 90 bp | CCCCGCAGCTTGGCCCAGGCTTTCTGCGTCTCCACAGGGAAGTCATaGGCAAATTCCTCGGCGATCACCTCCAGAATGACCCCAGAGAGA | + |
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Preference number: 6 (lower is better) Translates to: PRSLAQAFCVSTGKS*ANSSAITSRMTPER Trigger: TCTCTCTGGGGTCATTCTGGAGGTGATCGCCGAGGAATTTGCCAATGACTTCCCTGTGGAGACGCAGAAAGCCTGGGCCAAGCTGCGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS CAA 72 bp | TACATAGGTTCCACCTTGTGCTTGAGGGCGTGGGCCTaGCCGACCAGGGCGAGCACAGAGGATACCTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: YIGSTLCLRAWA*PTRASTEDTLS Trigger: AGACAAGGTATCCTCTGTGCTCGCCCTGGTCGGCAAGGCCCACGCCCTCAAGCACAAGGTGGAACCTATGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS GCA 72 bp | CCAGAGAGAATCTTAAAGTACATAGGTTCCACCTTGTaGTTGAGGGCGTGGGCCTTGCCGACCAGGGCGAGC | + |
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Preference number: 6 (lower is better) Translates to: PERILKYIGSTL*LRAWALPTRAS Trigger: GCTCGCCCTGGTCGGCAAGGCCCACGCCCTCAAGCACAAGGTGGAACCTATGTACTTTAAGATTCTCTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS CCA 72 bp | TTAAAGTACATAGGTTCCACCTTGTGCTTGAGGGCGTaGGCCTTGCCGACCAGGGCGAGCACAGAGGATACC | + |
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Preference number: 6 (lower is better) Translates to: LKYIGSTLCLRA*ALPTRASTEDT Trigger: GGTATCCTCTGTGCTCGCCCTGGTCGGCAAGGCCCACGCCCTCAAGCACAAGGTGGAACCTATGTACTTTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS CAA 72 bp | ACCCCAGAGAGAATCTTAAAGTACATAGGTTCCACCTaGTGCTTGAGGGCGTGGGCCTTGCCGACCAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: TPERILKYIGST*CLRAWALPTRA Trigger: CGCCCTGGTCGGCAAGGCCCACGCCCTCAAGCACAAGGTGGAACCTATGTACTTTAAGATTCTCTCTGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS CAA 90 bp | ATCTTAAAGTACATAGGTTCCACCTTGTGCTTGAGGGCGTGGGCCTaGCCGACCAGGGCGAGCACAGAGGATACCTTGTCTGGGTCATGC | + |
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Preference number: 6 (lower is better) Translates to: ILKYIGSTLCLRAWA*PTRASTEDTLSGSC Trigger: GCATGACCCAGACAAGGTATCCTCTGTGCTCGCCCTGGTCGGCAAGGCCCACGCCCTCAAGCACAAGGTGGAACCTATGTACTTTAAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS CAA 90 bp | ATGACCCCAGAGAGAATCTTAAAGTACATAGGTTCCACCTTGTGCTaGAGGGCGTGGGCCTTGCCGACCAGGGCGAGCACAGAGGATACC | + |
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Preference number: 6 (lower is better) Translates to: MTPERILKYIGSTLC*RAWALPTRASTEDT Trigger: GGTATCCTCTGTGCTCGCCCTGGTCGGCAAGGCCCACGCCCTCAAGCACAAGGTGGAACCTATGTACTTTAAGATTCTCTCTGGGGTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS CAA 90 bp | TCCAGAATGACCCCAGAGAGAATCTTAAAGTACATAGGTTCCACCTaGTGCTTGAGGGCGTGGGCCTTGCCGACCAGGGCGAGCACAGAG | + |
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Preference number: 6 (lower is better) Translates to: SRMTPERILKYIGST*CLRAWALPTRASTE Trigger: CTCTGTGCTCGCCCTGGTCGGCAAGGCCCACGCCCTCAAGCACAAGGTGGAACCTATGTACTTTAAGATTCTCTCTGGGGTCATTCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS CAA 72 bp | GAGAGAATCTTAAAGTACATAGGTTCCACCTTGTGCTaGAGGGCGTGGGCCTTGCCGACCAGGGCGAGCACA | + |
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Preference number: 6 (lower is better) Translates to: ERILKYIGSTLC*RAWALPTRAST Trigger: TGTGCTCGCCCTGGTCGGCAAGGCCCACGCCCTCAAGCACAAGGTGGAACCTATGTACTTTAAGATTCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS CAA 90 bp | ATCTCCAAGGGATCCTCCATGTGTCTAAACTGGCTGAAGTACTGCTaGGCCGAAGGGAAGTTCACAAAGAACCTCACCAGGATGGCCACC | + |
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Preference number: 6 (lower is better) Translates to: ISKGSSMCLNWLKYC*AEGKFTKNLTRMAT Trigger: GGTGGCCATCCTGGTGAGGTTCTTTGTGAACTTCCCTTCGGCCAAGCAGTACTTCAGCCAGTTTAGACACATGGAGGATCCCTTGGAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS CAA 72 bp | GGATCCTCCATGTGTCTAAACTGGCTGAAGTACTGCTaGGCCGAAGGGAAGTTCACAAAGAACCTCACCAGG | + |
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Preference number: 6 (lower is better) Translates to: GSSMCLNWLKYC*AEGKFTKNLTR Trigger: CCTGGTGAGGTTCTTTGTGAACTTCCCTTCGGCCAAGCAGTACTTCAGCCAGTTTAGACACATGGAGGATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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| CDS GCA 72 bp | AAGGGATCCTCCATGTGTCTAAACTGGCTGAAGTACTaGTTGGCCGAAGGGAAGTTCACAAAGAACCTCACC | + |
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Preference number: 6 (lower is better) Translates to: KGSSMCLNWLKY*LAEGKFTKNLT Trigger: GGTGAGGTTCTTTGTGAACTTCCCTTCGGCCAAGCAGTACTTCAGCCAGTTTAGACACATGGAGGATCCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021166.6 |
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