Pregenerated sensors for CYC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022551Ensembl transcript IDs: ENSMUST00000023210.8, ENSMUST00000229013.2
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCGTGTAGCACACTCCCACCAGGTGGCGGTACGCCACATAATCCATaGTGTGGCAGGAAGAGCACACCTGCTTGTATACCTGGAAACCCC | + |
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Preference number: 1 (lower is better) Translates to: PCSTLPPGGGTPHNP*CGRKSTPACIPGNP Trigger: GGGGTTTCCAGGTATACAAGCAGGTGTGCTCTTCCTGCCACAGCATGGATTATGTGGCGTACCGCCACCTGGTGGGAGTGTGCTACACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229013.2 |
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| 3UTR GCA 90 bp | AGCCCTTGCGACTGGAGACAGATGGTTTTGAGCCACCATGTTGAGTaGTGGGAACTGAACCCAGGTCCTCTGGAAAAGCAGCCAGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: SPCDWRQMVLSHHVE*WELNPGPLEKQPVL Trigger: GAGCACTGGCTGCTTTTCCAGAGGACCTGGGTTCAGTTCCCAGCACTCAACATGGTGGCTCAAAACCATCTGTCTCCAGTCGCAAGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| 3UTR CCA 90 bp | TCCATTGTTAGCAGCTCTTGCAGCCTCAGGGTTAGGGTATGGTTTTaGAAAATAGTCAGACAACTTCCCTGGCCGCATGAACATCTCCCC | + |
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Preference number: 1 (lower is better) Translates to: SIVSSSCSLRVRVWF*KIVRQLPWPHEHLP Trigger: GGGGAGATGTTCATGCGGCCAGGGAAGTTGTCTGACTATTTTCCAAAACCATACCCTAACCCTGAGGCTGCAAGAGCTGCTAACAATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229013.2 |
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| 3UTR CCA 90 bp | CTGCCAGGTTTTGCATTCTGGTGCATATCAATAACTCCCAGATACTaGGCAGTACAGGAAACAATAATGTGGAGAAATATGGGTTCCAGG | + |
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Preference number: 1 (lower is better) Translates to: LPGFAFWCISITPRY*AVQETIMWRNMGSR Trigger: CCTGGAACCCATATTTCTCCACATTATTGTTTCCTGTACTGCCCAGTATCTGGGAGTTATTGATATGCACCAGAATGCAAAACCTGGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| 3UTR-3UTR CCA 90 bp | ATCATTAGGGCCATCCTGGACCTCCACCTCCTCAGCCAGCGCCTTGGCTTCTTCACCTGCTTGTATACCTaGAAACCCCTCCGAATGCTG | + |
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Preference number: 2 (lower is better) Translates to: IIRAILDLHLLSQRLGFFTCLYT*KPLRML Trigger: CAGCATTCGGAGGGGTTTCCAGGTATACAAGCAGGT...GAAGAAGCCAAGGCGCTGGCTGAGGAGGTGGAGGTCCAGGATGGCCCTAATGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229013.2 |
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| 3UTR-3UTR TCA 90 bp | GACTGGAGACAGATGGTTTTGAGCCACCATGTTGAGTGCTGGGAACTGAACCCATCCCACACTGAGGGCTaGAGGAAGATCAGAAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: DWRQMVLSHHVECWELNPSHTEG*RKIRSK Trigger: CTTGCTTCTGATCTTCCTTCAGCCCTCAGTGTGGGA...TGGGTTCAGTTCCCAGCACTCAACATGGTGGCTCAAAACCATCTGTCTCCAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| 3UTR-3UTR TCA 90 bp | TACCTACACGGACAGCTTTGTATTACATTCATGCAGTGCCTTGAAGGCCAAAAGGAAAAGGGCCAGGCCTaGGAAGGCCATGGACTGTTC | + |
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Preference number: 2 (lower is better) Translates to: YLHGQLCITFMQCLEGQKEKGQA*EGHGLF Trigger: GAACAGTCCATGGCCTTCTCAGGCCTGGCCCTTTTC...CTTTTGGCCTTCAAGGCACTGCATGAATGTAATACAAAGCTGTCCGTGTAGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| 3UTR-3UTR TCA 90 bp | GCTCCATTGTTAGCAGCTCTTGCAGCCTCAGGGTTAGGGTATGGTTTTGGAAAAACTTCCCTGGCCGCATaGACATCTCCCCATCATCAT | + |
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Preference number: 2 (lower is better) Translates to: APLLAALAASGLGYGFGKTSLAA*TSPHHH Trigger: ATGATGATGGGGAGATGTTCATGCGGCCAGGGAAGT...TTTTCCAAAACCATACCCTAACCCTGAGGCTGCAAGAGCTGCTAACAATGGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000229013.2 |
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| 3UTR-3UTR CCA 90 bp | GACTGGAGACAGATGGTTTTGAGCCACCATGTTGAGTGCTGGGAACTGAACCCAGCTGAGAGCTTGTTCTaGCAAGATGACAAGCAGATA | + |
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Preference number: 2 (lower is better) Translates to: DWRQMVLSHHVECWELNPAESLF*QDDKQI Trigger: TATCTGCTTGTCATCTTGCCAGAACAAGCTCTCAGC...TGGGTTCAGTTCCCAGCACTCAACATGGTGGCTCAAAACCATCTGTCTCCAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTGCTGGGAACTGAACCCAGGTCCTCTGGAAAAGCAGCCAGTGCTCTTAACCCAGGAAACAATAATGTaGAGAAATATGGGTTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: ECWELNPGPLEKQPVLLTQETIM*RNMGSR Trigger: CCTGGAACCCATATTTCTCCACATTATTGTTTCCTG...GGTTAAGAGCACTGGCTGCTTTTCCAGAGGACCTGGGTTCAGTTCCCAGCACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| 3UTR-3UTR CCA 90 bp | AGACAGATGGTTTTGAGCCACCATGTTGAGTGCTGGGAACTGAACCCAGGTCCTCCAGGTTTTGCATTCTaGTGCATATCAATAACTCCC | + |
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Preference number: 2 (lower is better) Translates to: RQMVLSHHVECWELNPGPPGFAF*CISITP Trigger: GGGAGTTATTGATATGCACCAGAATGCAAAACCTGG...AGGACCTGGGTTCAGTTCCCAGCACTCAACATGGTGGCTCAAAACCATCTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| 3UTR-3UTR CAA 90 bp | CCATCATCATTAGGGCCATCCTGGACCTCCACCTCCTCAGCCAGCGCCTTGGCTGAAGAGCACACCTGCTaGTATACCTGGAAACCCCTC | + |
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Preference number: 3 (lower is better) Translates to: PSSLGPSWTSTSSASALAEEHTC*YTWKPL Trigger: GAGGGGTTTCCAGGTATACAAGCAGGTGTGCTCTTC...AGCCAAGGCGCTGGCTGAGGAGGTGGAGGTCCAGGATGGCCCTAATGATGATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229013.2 |
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| 3UTR GCA 72 bp | ACACTCCCACCAGGTGGCGGTACGCCACATAATCCATaGTGTGGCAGGAAGAGCACACCTGCTTGTATACCT | + |
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Preference number: 3 (lower is better) Translates to: TLPPGGGTPHNP*CGRKSTPACIP Trigger: AGGTATACAAGCAGGTGTGCTCTTCCTGCCACAGCATGGATTATGTGGCGTACCGCCACCTGGTGGGAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229013.2 |
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| 3UTR CCA 72 bp | AAAAGGGCCAGGCCTGAGAAGGCCATGGACTGTTCCTaGGCTGCTGAGAGCTTGTTCTGGCAAGATGACAAG | + |
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Preference number: 3 (lower is better) Translates to: KRARPEKAMDCS*AAESLFWQDDK Trigger: CTTGTCATCTTGCCAGAACAAGCTCTCAGCAGCCCAGGAACAGTCCATGGCCTTCTCAGGCCTGGCCCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| 3UTR CCA 72 bp | ATGCTGTGGCAGGAAGAGCACACCTGCTTGTATACCTaGAAACCCCTCCGAATGCTGGTGTGGTCCAAGGAG | + |
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Preference number: 3 (lower is better) Translates to: MLWQEEHTCLYT*KPLRMLVWSKE Trigger: CTCCTTGGACCACACCAGCATTCGGAGGGGTTTCCAGGTATACAAGCAGGTGTGCTCTTCCTGCCACAGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229013.2 |
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| 3UTR TCA 72 bp | AGGTCCTCTGGAAAAGCAGCCAGTGCTCTTAACCACTaGGCCATCTCTCCCATGCAAACAGTGCTGCCAGGT | + |
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Preference number: 3 (lower is better) Translates to: RSSGKAASALNH*AISPMQTVLPG Trigger: ACCTGGCAGCACTGTTTGCATGGGAGAGATGGCTCAGTGGTTAAGAGCACTGGCTGCTTTTCCAGAGGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| 3UTR-3UTR CAA 90 bp | GAAAAGCAGCCAGTGCTCTTAACCACTGAGCCATCTCTCCCATGCAAACAGTGCCTGGTCTCCTGGCCCTaGTATCTGATGAAAAGGGCC | + |
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Preference number: 3 (lower is better) Translates to: EKQPVLLTTEPSLPCKQCLVSWP*YLMKRA Trigger: GGCCCTTTTCATCAGATACAAGGGCCAGGAGACCAG...GCACTGTTTGCATGGGAGAGATGGCTCAGTGGTTAAGAGCACTGGCTGCTTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| 3UTR GCA 72 bp | CAGCCAGTGCTCTTAACCACTGAGCCATCTCTCCCATaGAAACAGTGCTGCCAGGTTTTGCATTCTGGTGCA | + |
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Preference number: 3 (lower is better) Translates to: QPVLLTTEPSLP*KQCCQVLHSGA Trigger: TGCACCAGAATGCAAAACCTGGCAGCACTGTTTGCATGGGAGAGATGGCTCAGTGGTTAAGAGCACTGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| 3UTR TCA 72 bp | ACACGGACAGCTTTGTATTACATTCATGCAGTGCCTTaGAGGCCAAAAGAGGGTGTTAGAGCCCTTGCGACT | + |
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Preference number: 3 (lower is better) Translates to: TRTALYYIHAVP*RPKEGVRALAT Trigger: AGTCGCAAGGGCTCTAACACCCTCTTTTGGCCTTCAAGGCACTGCATGAATGTAATACAAAGCTGTCCGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| 3UTR GCA 72 bp | AGCCATCTCTCCCATGCAAACAGTGCTGCCAGGTTTTaGATTCTGGTGCATATCAATAACTCCCAGATACTG | + |
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Preference number: 3 (lower is better) Translates to: SHLSHANSAARF*ILVHINNSQIL Trigger: CAGTATCTGGGAGTTATTGATATGCACCAGAATGCAAAACCTGGCAGCACTGTTTGCATGGGAGAGATGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| 3UTR GCA 72 bp | TACCTACACGGACAGCTTTGTATTACATTCATGCAGTaGCTTGAAGGCCAAAAGAGGGTGTTAGAGCCCTTG | + |
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Preference number: 3 (lower is better) Translates to: YLHGQLCITFMQ*LEGQKRVLEPL Trigger: CAAGGGCTCTAACACCCTCTTTTGGCCTTCAAGGCACTGCATGAATGTAATACAAAGCTGTCCGTGTAGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| 3UTR CCA 72 bp | TCTCCCATGCAAACAGTGCTGCCAGGTTTTGCATTCTaGTGCATATCAATAACTCCCAGATACTGGGCAGTA | + |
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Preference number: 3 (lower is better) Translates to: SPMQTVLPGFAF*CISITPRYWAV Trigger: TACTGCCCAGTATCTGGGAGTTATTGATATGCACCAGAATGCAAAACCTGGCAGCACTGTTTGCATGGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| 3UTR TCA 72 bp | ATGTTGAGAAACTTAATTTATTCCCACACTGAGGGCTaGAGGAAGATCAGAAGCAAGAGTCTGGTCTCCTGG | + |
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Preference number: 3 (lower is better) Translates to: MLRNLIYSHTEG*RKIRSKSLVSW Trigger: CCAGGAGACCAGACTCTTGCTTCTGATCTTCCTTCAGCCCTCAGTGTGGGAATAAATTAAGTTTCTCAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| 3UTR CCA 72 bp | TTTGCATTCTGGTGCATATCAATAACTCCCAGATACTaGGCAGTACAGGAAACAATAATGTGGAGAAATATG | + |
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Preference number: 3 (lower is better) Translates to: FAFWCISITPRY*AVQETIMWRNM Trigger: CATATTTCTCCACATTATTGTTTCCTGTACTGCCCAGTATCTGGGAGTTATTGATATGCACCAGAATGCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| CDS-3UTR GCA 90 bp | GAATGCTGGTGTGGTCCAAGGAGGAGAGGAGGCCACGATGAGACCATGGGTAGCCAGACCCGGAGCACTTaGACCTGGAAGCCCCACGCC | + |
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Preference number: 4 (lower is better) Translates to: ECWCGPRRRGGHDETMGSQTRST*TWKPHA Trigger: GGCGTGGGGCTTCCAGGTGCAAGTGCTCCGGGTCTG...GCTACCCATGGTCTCATCGTGGCCTCCTCTCCTCCTTGGACCACACCAGCATTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229013.2 |
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| CDS-3UTR GCA 90 bp | TGGCCCTTGTATCTGATGAAAAGGGCCAGGCCTGAGAAGGCCATGGACTGTTCCCCCCCGCGGCCAGCATaGCCAACGCTGACAGCATCA | + |
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Preference number: 4 (lower is better) Translates to: WPLYLMKRARPEKAMDCSPPRPA*PTLTAS Trigger: TGATGCTGTCAGCGTTGGGCATGCTGGCCGCGGGGG...GGAACAGTCCATGGCCTTCTCAGGCCTGGCCCTTTTCATCAGATACAAGGGCCA 60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| CDS-3UTR GCA 90 bp | GTGGCGGTACGCCACATAATCCATGCTGTGGCAGGAAGAGCACACCTGCTTGTACCCCCGCGGCCAGCATaGCCAACGCTGACAGCATCA | + |
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Preference number: 4 (lower is better) Translates to: VAVRHIIHAVAGRAHLLVPPRPA*PTLTAS Trigger: TGATGCTGTCAGCGTTGGGCATGCTGGCCGCGGGGG...TACAAGCAGGTGTGCTCTTCCTGCCACAGCATGGATTATGTGGCGTACCGCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229013.2 |
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| CDS-3UTR GCA 90 bp | GAATGCTGGTGTGGTCCAAGGAGGAGAGGAGGCCACGATGAGACCATGGGTAGCGACAAGGACACTGCCTaGAAGAGCCCCGCTCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: ECWCGPRRRGGHDETMGSDKDTA*KSPAQH Trigger: GTGCTGAGCGGGGCTCTTGCAGGCAGTGTCCTTGTC...GCTACCCATGGTCTCATCGTGGCCTCCTCTCCTCCTTGGACCACACCAGCATTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229013.2 |
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| CDS-3UTR TCA 90 bp | AACTTCCCTGGCCGCATGAACATCTCCCCATCATCATTAGGGCCATCCTGGACCCAGCATGCCCAACGCTaGCAGCATCACCTTTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: NFPGRMNISPSSLGPSWTQHAQR*QHHLSA Trigger: GGCCGAAAGGTGATGCTGTCAGCGTTGGGCATGCTG...GGTCCAGGATGGCCCTAATGATGATGGGGAGATGTTCATGCGGCCAGGGAAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229013.2 |
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| CDS-3UTR GCA 90 bp | CCTCTGGAAAAGCAGCCAGTGCTCTTAACCACTGAGCCATCTCTCCCATGCAAACAGACCCGGAGCACTTaGACCTGGAAGCCCCACGCC | + |
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Preference number: 4 (lower is better) Translates to: PLEKQPVLLTTEPSLPCKQTRST*TWKPHA Trigger: GGCGTGGGGCTTCCAGGTGCAAGTGCTCCGGGTCTG...TTTGCATGGGAGAGATGGCTCAGTGGTTAAGAGCACTGGCTGCTTTTCCAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| CDS-3UTR CCA 90 bp | CATGTTGAGTGCTGGGAACTGAACCCAGGTCCTCTGGAAAAGCAGCCAGTGCTCCCTCAGCCAGCGCCTTaGCTTCTTCCTCCGTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: HVECWELNPGPLEKQPVLPQPAP*LLPPCS Trigger: GCTACACGGAGGAAGAAGCCAAGGCGCTGGCTGAGG...GAGCACTGGCTGCTTTTCCAGAGGACCTGGGTTCAGTTCCCAGCACTCAACATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| CDS-3UTR TCA 90 bp | AAGCAGCCAGTGCTCTTAACCACTGAGCCATCTCTCCCATGCAAACAGTGCTGCCAGCATGCCCAACGCTaGCAGCATCACCTTTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: KQPVLLTTEPSLPCKQCCQHAQR*QHHLSA Trigger: GGCCGAAAGGTGATGCTGTCAGCGTTGGGCATGCTG...GCAGCACTGTTTGCATGGGAGAGATGGCTCAGTGGTTAAGAGCACTGGCTGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| 3UTR CAA 72 bp | AGGAAGATCAGAAGCAAGAGTCTGGTCTCCTGGCCCTaGTATCTGATGAAAAGGGCCAGGCCTGAGAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: RKIRSKSLVSWP*YLMKRARPEKA Trigger: GGCCTTCTCAGGCCTGGCCCTTTTCATCAGATACAAGGGCCAGGAGACCAGACTCTTGCTTCTGATCTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| CDS-3UTR TCA 90 bp | GAACTGAACCCAGGTCCTCTGGAAAAGCAGCCAGTGCTCTTAACCACTGAGCCAACTTCCCTGGCCGCATaGACATCTCCCCATCATCAT | + |
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Preference number: 4 (lower is better) Translates to: ELNPGPLEKQPVLLTTEPTSLAA*TSPHHH Trigger: ATGATGATGGGGAGATGTTCATGCGGCCAGGGAAGT...TGGCTCAGTGGTTAAGAGCACTGGCTGCTTTTCCAGAGGACCTGGGTTCAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| CDS-3UTR TCA 90 bp | CAGATGGTTTTGAGCCACCATGTTGAGTGCTGGGAACTGAACCCAGGTCCTCTGATCCTTAGCTACTTGTaGCATGGTAGCTGGGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: QMVLSHHVECWELNPGPLILSYL*HGSWGA Trigger: GGCACCCCAGCTACCATGTCACAAGTAGCTAAGGAT...CAGAGGACCTGGGTTCAGTTCCCAGCACTCAACATGGTGGCTCAAAACCATCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| CDS-3UTR TCA 90 bp | CATGTTGAGTGCTGGGAACTGAACCCAGGTCCTCTGGAAAAGCAGCCAGTGCTCTCGACTCTTCAGGACTaGCCACTTATGCCGCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: HVECWELNPGPLEKQPVLSTLQD*PLMPLH Trigger: ATGAAGCGGCATAAGTGGTCAGTCCTGAAGAGTCGA...GAGCACTGGCTGCTTTTCCAGAGGACCTGGGTTCAGTTCCCAGCACTCAACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| CDS-3UTR CCA 90 bp | GAAAAGCAGCCAGTGCTCTTAACCACTGAGCCATCTCTCCCATGCAAACAGTGCGTCAGACAACTTCCCTaGCCGCATGAACATCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: EKQPVLLTTEPSLPCKQCVRQLP*PHEHLP Trigger: GGGGAGATGTTCATGCGGCCAGGGAAGTTGTCTGAC...GCACTGTTTGCATGGGAGAGATGGCTCAGTGGTTAAGAGCACTGGCTGCTTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| 3UTR CAA 72 bp | GAGAAGGCCATGGACTGTTCCTGGGCTGCTGAGAGCTaGTTCTGGCAAGATGACAAGCAGATACTGAACAGG | + |
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Preference number: 4 (lower is better) Translates to: EKAMDCSWAAES*FWQDDKQILNR Trigger: CCTGTTCAGTATCTGCTTGTCATCTTGCCAGAACAAGCTCTCAGCAGCCCAGGAACAGTCCATGGCCTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| CDS-3UTR GCA 90 bp | TGGCCCTTGTATCTGATGAAAAGGGCCAGGCCTGAGAAGGCCATGGACTGTTCCATTGTTAGCAGCTCTTaGAGCCTCAGGGTTAGGGTA | + |
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Preference number: 4 (lower is better) Translates to: WPLYLMKRARPEKAMDCSIVSSS*SLRVRV Trigger: TACCCTAACCCTGAGGCTGCAAGAGCTGCTAACAAT...GGAACAGTCCATGGCCTTCTCAGGCCTGGCCCTTTTCATCAGATACAAGGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| CDS-3UTR CCA 90 bp | GTGCTGCCAGGTTTTGCATTCTGGTGCATATCAATAACTCCCAGATACTGGGCAGAGGAGCCATGCCAATaGCCTGGCCGGGAAAGTAAG | + |
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Preference number: 4 (lower is better) Translates to: VLPGFAFWCISITPRYWAEEPCQ*PGRESK Trigger: CTTACTTTCCCGGCCAGGCCATTGGCATGGCTCCTC...TGCCCAGTATCTGGGAGTTATTGATATGCACCAGAATGCAAAACCTGGCAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| CDS-3UTR TCA 90 bp | TTTATTCCCACACTGAGGGCTGAAGGAAGATCAGAAGCAAGAGTCTGGTCTCCTCTCGAACGATGTAGCTaGGGTCAGGGGGTAAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: FIPTLRAEGRSEARVWSPLERCS*GQGVKL Trigger: GAGCTTTACCCCCTGACCTCAGCTACATCGTTCGAG...AGGAGACCAGACTCTTGCTTCTGATCTTCCTTCAGCCCTCAGTGTGGGAATAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| CDS-3UTR GCA 90 bp | GACTGGAGACAGATGGTTTTGAGCCACCATGTTGAGTGCTGGGAACTGAACCCACAGGAAGAGCACACCTaGTTGTATACCTGGAAACCC | + |
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Preference number: 4 (lower is better) Translates to: DWRQMVLSHHVECWELNPQEEHT*LYTWKP Trigger: GGGTTTCCAGGTATACAAGCAGGTGTGCTCTTCCTG...TGGGTTCAGTTCCCAGCACTCAACATGGTGGCTCAAAACCATCTGTCTCCAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| CDS-3UTR GCA 90 bp | TACTGGGCAGTACAGGAAACAATAATGTGGAGAAATATGGGTTCCAGGGTTCCAAGATGGGAGGAGCCATaGCAATGGCCTGGCCGGGAA | + |
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Preference number: 4 (lower is better) Translates to: YWAVQETIMWRNMGSRVPRWEEP*QWPGRE Trigger: TTCCCGGCCAGGCCATTGGCATGGCTCCTCCCATCT...TGGAACCCTGGAACCCATATTTCTCCACATTATTGTTTCCTGTACTGCCCAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| CDS-3UTR GCA 90 bp | GAAAAGCAGCCAGTGCTCTTAACCACTGAGCCATCTCTCCCATGCAAACAGTGCCGTTTTCGATGGTCATaGTCTGGTTCTGATGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: EKQPVLLTTEPSLPCKQCRFRWS*SGSDAQ Trigger: CTGGGCATCAGAACCAGAGCATGACCATCGAAAACG...GCACTGTTTGCATGGGAGAGATGGCTCAGTGGTTAAGAGCACTGGCTGCTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| CDS-3UTR CCA 90 bp | TCCTGGGCTGCTGAGAGCTTGTTCTGGCAAGATGACAAGCAGATACTGAACAGGACCTGCTTGTATACCTaGAAACCCCTCCGAATGCTG | + |
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Preference number: 4 (lower is better) Translates to: SWAAESLFWQDDKQILNRTCLYT*KPLRML Trigger: CAGCATTCGGAGGGGTTTCCAGGTATACAAGCAGGT...CCTGTTCAGTATCTGCTTGTCATCTTGCCAGAACAAGCTCTCAGCAGCCCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| CDS-3UTR CCA 90 bp | CTTTGTATTACATTCATGCAGTGCCTTGAAGGCCAAAAGAGGGTGTTAGAGCCCGCAGCTCCAGGTCACTaGCACTCACGGCAGAATGAA | + |
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Preference number: 4 (lower is better) Translates to: LCITFMQCLEGQKRVLEPAAPGH*HSRQNE Trigger: TTCATTCTGCCGTGAGTGCCAGTGACCTGGAGCTGC...GGGCTCTAACACCCTCTTTTGGCCTTCAAGGCACTGCATGAATGTAATACAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| CDS-3UTR GCA 90 bp | GCTGCCAGGTTTTGCATTCTGGTGCATATCAATAACTCCCAGATACTGGGCAGTACGCCACATAATCCATaGTGTGGCAGGAAGAGCACA | + |
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Preference number: 4 (lower is better) Translates to: AARFCILVHINNSQILGSTPHNP*CGRKST Trigger: TGTGCTCTTCCTGCCACAGCATGGATTATGTGGCGT...ACTGCCCAGTATCTGGGAGTTATTGATATGCACCAGAATGCAAAACCTGGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| CDS-3UTR CCA 90 bp | TGGCCCTTGTATCTGATGAAAAGGGCCAGGCCTGAGAAGGCCATGGACTGTTCCCTCAGGGTTAGGGTATaGTTTTGGAAAATAGTCAGA | + |
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Preference number: 4 (lower is better) Translates to: WPLYLMKRARPEKAMDCSLRVRV*FWKIVR Trigger: TCTGACTATTTTCCAAAACCATACCCTAACCCTGAG...GGAACAGTCCATGGCCTTCTCAGGCCTGGCCCTTTTCATCAGATACAAGGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| CDS-3UTR CCA 90 bp | CCCTTGTATCTGATGAAAAGGGCCAGGCCTGAGAAGGCCATGGACTGTTCCTGGGTTAGGGTATGGTTTTaGAAAATAGTCAGACAACTT | + |
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Preference number: 4 (lower is better) Translates to: PLYLMKRARPEKAMDCSWVRVWF*KIVRQL Trigger: AAGTTGTCTGACTATTTTCCAAAACCATACCCTAAC...CCAGGAACAGTCCATGGCCTTCTCAGGCCTGGCCCTTTTCATCAGATACAAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| CDS-3UTR CCA 90 bp | AACAGTGCTGCCAGGTTTTGCATTCTGGTGCATATCAATAACTCCCAGATACTGCCCATGCGTTTTCGATaGTCATGCTCTGGTTCTGAT | + |
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Preference number: 4 (lower is better) Translates to: NSAARFCILVHINNSQILPMRFR*SCSGSD Trigger: ATCAGAACCAGAGCATGACCATCGAAAACGCATGGG...CAGTATCTGGGAGTTATTGATATGCACCAGAATGCAAAACCTGGCAGCACTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| CDS GCA 90 bp | TGGAAGCTGCCGGGACCGCGCGCCGCCCAGCAGACCCGGAGCACTTaGACCTGGAAGCCCCACGCCCCGCGGGCCCAGTACCGTCCGGCG | + |
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Preference number: 5 (lower is better) Translates to: WKLPGPRAAQQTRST*TWKPHAPRAQYRPA Trigger: CGCCGGACGGTACTGGGCCCGCGGGGCGTGGGGCTTCCAGGTGCAAGTGCTCCGGGTCTGCTGGGCGGCGCGCGGTCCCGGCAGCTTCCA 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023210.8 ENSMUST00000229013.2 |
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| CDS GCA 90 bp | ACTTCGAGGACAAGGACACTGCCTGCAAGAGCCCCGCTCAGCACCTaGGGTGTCCGCAATGGAAGCTGCCGGGACCGCGCGCCGCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: TSRTRTLPARAPLST*GVRNGSCRDRAPPS Trigger: GCTGGGCGGCGCGCGGTCCCGGCAGCTTCCATTGCGGACACCGCAGGTGCTGAGCGGGGCTCTTGCAGGCAGTGTCCTTGTCCTCGAAGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229013.2 |
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| CDS CCA 90 bp | AGGGCCAGACTTCGAGGACAAGGACACTGCCTGCGGTGTCCGCAATaGAAGCTGCCGGGACCGCGCGCCGCCCAGCAGACCCGGAGCACT | + |
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Preference number: 5 (lower is better) Translates to: RARLRGQGHCLRCPQ*KLPGPRAAQQTRST Trigger: AGTGCTCCGGGTCTGCTGGGCGGCGCGCGGTCCCGGCAGCTTCCATTGCGGACACCGCAGGCAGTGTCCTTGTCCTCGAAGTCTGGCCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| CDS GCA 90 bp | TTTCGGCCTCGAGAAGGGCCAGACTTCGAGGACAAGGACACTGCCTaGGGTGTCCGCAATGGAAGCTGCCGGGACCGCGCGCCGCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: FRPREGPDFEDKDTA*GVRNGSCRDRAPPS Trigger: GCTGGGCGGCGCGCGGTCCCGGCAGCTTCCATTGCGGACACCGCAGGCAGTGTCCTTGTCCTCGAAGTCTGGCCCTTCTCGAGGCCGAAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| CDS GCA 90 bp | CACCTTTCGGCCTCGAGAAGGGCCAGACTTCGAGGACAAGGACACTaGCTGCGGTGTCCGCAATGGAAGCTGCCGGGACCGCGCGCCGCC | + |
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Preference number: 5 (lower is better) Translates to: HLSASRRARLRGQGH*LRCPQWKLPGPRAA Trigger: GGCGGCGCGCGGTCCCGGCAGCTTCCATTGCGGACACCGCAGGCAGTGTCCTTGTCCTCGAAGTCTGGCCCTTCTCGAGGCCGAAAGGTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| CDS GCA 90 bp | TTTCGGCCTCGAGAAGGGCCAGACTTCGAGGACAAGGACACTGCCTaGAAGAGCCCCGCTCAGCACCTGCGGTGTCCGCAATGGAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: FRPREGPDFEDKDTA*KSPAQHLRCPQWKL Trigger: CAGCTTCCATTGCGGACACCGCAGGTGCTGAGCGGGGCTCTTGCAGGCAGTGTCCTTGTCCTCGAAGTCTGGCCCTTCTCGAGGCCGAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229013.2 |
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| CDS GCA 90 bp | CACCTTTCGGCCTCGAGAAGGGCCAGACTTCGAGGACAAGGACACTaGCTGCAAGAGCCCCGCTCAGCACCTGCGGTGTCCGCAATGGAA | + |
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Preference number: 5 (lower is better) Translates to: HLSASRRARLRGQGH*LQEPRSAPAVSAME Trigger: TTCCATTGCGGACACCGCAGGTGCTGAGCGGGGCTCTTGCAGGCAGTGTCCTTGTCCTCGAAGTCTGGCCCTTCTCGAGGCCGAAAGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229013.2 |
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| CDS-3UTR CAA 90 bp | GTCTCCTGGCCCTTGTATCTGATGAAAAGGGCCAGGCCTGAGAAGGCCATGGACGAAGAGCACACCTGCTaGTATACCTGGAAACCCCTC | + |
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Preference number: 5 (lower is better) Translates to: VSWPLYLMKRARPEKAMDEEHTC*YTWKPL Trigger: GAGGGGTTTCCAGGTATACAAGCAGGTGTGCTCTTC...GTCCATGGCCTTCTCAGGCCTGGCCCTTTTCATCAGATACAAGGGCCAGGAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| CDS CCA 90 bp | AGCAGGCCCATCATCAACAACATCTTGAGACCCATGCGTTTTCGATaGTCATGCTCTGGTTCTGATGCCCAGCGAAGGAAGGTGGCGACA | + |
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Preference number: 5 (lower is better) Translates to: SRPIINNILRPMRFR*SCSGSDAQRRKVAT Trigger: TGTCGCCACCTTCCTTCGCTGGGCATCAGAACCAGAGCATGACCATCGAAAACGCATGGGTCTCAAGATGTTGTTGATGATGGGCCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| CDS CCA 90 bp | AAGCCAGCTTTCGACTCTTCAGGACTGACCACTTATGCCGCTTCATaGCATAGGTCAGGGGCAGCAGCAGGCCCATCATCAACAACATCT | + |
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Preference number: 5 (lower is better) Translates to: KPAFDSSGLTTYAAS*HRSGAAAGPSSTTS Trigger: AGATGTTGTTGATGATGGGCCTGCTGCTGCCCCTGACCTATGCCATGAAGCGGCATAAGTGGTCAGTCCTGAAGAGTCGAAAGCTGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| CDS GCA 90 bp | CCCATCATCAACAACATCTTGAGACCCATGCGTTTTCGATGGTCATaGTCTGGTTCTGATGCCCAGCGAAGGAAGGTGGCGACATCCTTA | + |
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Preference number: 5 (lower is better) Translates to: PIINNILRPMRFRWS*SGSDAQRRKVATSL Trigger: TAAGGATGTCGCCACCTTCCTTCGCTGGGCATCAGAACCAGAGCATGACCATCGAAAACGCATGGGTCTCAAGATGTTGTTGATGATGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| CDS-3UTR CAA 90 bp | GTGCTGCCAGGTTTTGCATTCTGGTGCATATCAATAACTCCCAGATACTGGGCAGGGGGTAAAGCTCCATaGTTAGCAGCTCTTGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: VLPGFAFWCISITPRYWAGGKAP*LAALAA Trigger: GGCTGCAAGAGCTGCTAACAATGGAGCTTTACCCCC...TGCCCAGTATCTGGGAGTTATTGATATGCACCAGAATGCAAAACCTGGCAGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| CDS-3UTR CAA 90 bp | CTTTGTATTACATTCATGCAGTGCCTTGAAGGCCAAAAGAGGGTGTTAGAGCCCATCATCAACAACATCTaGAGACCCATGCGTTTTCGA | + |
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Preference number: 5 (lower is better) Translates to: LCITFMQCLEGQKRVLEPIINNI*RPMRFR Trigger: TCGAAAACGCATGGGTCTCAAGATGTTGTTGATGAT...GGGCTCTAACACCCTCTTTTGGCCTTCAAGGCACTGCATGAATGTAATACAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| CDS CCA 72 bp | CCGCGCGCCGCCCAGCAGACCCGGAGCACTTGCACCTaGAAGCCCCACGCCCCGCGGGCCCAGTACCGTCCG | + |
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Preference number: 6 (lower is better) Translates to: PRAAQQTRSTCT*KPHAPRAQYRP Trigger: CGGACGGTACTGGGCCCGCGGGGCGTGGGGCTTCCAGGTGCAAGTGCTCCGGGTCTGCTGGGCGGCGCGCGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023210.8 ENSMUST00000229013.2 |
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| CDS CAA 90 bp | ATGGAAGCTGCCGGGACCGCGCGCCGCCCAGCAGACCCGGAGCACTaGCACCTGGAAGCCCCACGCCCCGCGGGCCCAGTACCGTCCGGC | + |
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Preference number: 6 (lower is better) Translates to: MEAAGTARRPADPEH*HLEAPRPAGPVPSG Trigger: GCCGGACGGTACTGGGCCCGCGGGGCGTGGGGCTTCCAGGTGCAAGTGCTCCGGGTCTGCTGGGCGGCGCGCGGTCCCGGCAGCTTCCAT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023210.8 ENSMUST00000229013.2 |
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| CDS GCA 72 bp | CGAGAAGGGCCAGACTTCGAGGACAAGGACACTGCCTaGGGTGTCCGCAATGGAAGCTGCCGGGACCGCGCG | + |
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Preference number: 6 (lower is better) Translates to: REGPDFEDKDTA*GVRNGSCRDRA Trigger: CGCGCGGTCCCGGCAGCTTCCATTGCGGACACCGCAGGCAGTGTCCTTGTCCTCGAAGTCTGGCCCTTCTCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| CDS GCA 72 bp | GCCTCGAGAAGGGCCAGACTTCGAGGACAAGGACACTaGCTGCGGTGTCCGCAATGGAAGCTGCCGGGACCG | + |
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Preference number: 6 (lower is better) Translates to: ASRRARLRGQGH*LRCPQWKLPGP Trigger: CGGTCCCGGCAGCTTCCATTGCGGACACCGCAGGCAGTGTCCTTGTCCTCGAAGTCTGGCCCTTCTCGAGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| CDS GCA 72 bp | GCCTCGAGAAGGGCCAGACTTCGAGGACAAGGACACTaGCTGCAAGAGCCCCGCTCAGCACCTGCGGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: ASRRARLRGQGH*LQEPRSAPAVS Trigger: GGACACCGCAGGTGCTGAGCGGGGCTCTTGCAGGCAGTGTCCTTGTCCTCGAAGTCTGGCCCTTCTCGAGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229013.2 |
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| CDS GCA 72 bp | CGAGAAGGGCCAGACTTCGAGGACAAGGACACTGCCTaGAAGAGCCCCGCTCAGCACCTGCGGTGTCCGCAA | + |
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Preference number: 6 (lower is better) Translates to: REGPDFEDKDTA*KSPAQHLRCPQ Trigger: TTGCGGACACCGCAGGTGCTGAGCGGGGCTCTTGCAGGCAGTGTCCTTGTCCTCGAAGTCTGGCCCTTCTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229013.2 |
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| CDS TCA 72 bp | GAGCCATGCCAATGGCCTGGCCGGGAAAGTAAGGGTTaGAATAGAGGCCTTCTCGCAATGACACCCCAGTGG | + |
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Preference number: 6 (lower is better) Translates to: EPCQWPGRESKG*NRGLLAMTPQW Trigger: CCACTGGGGTGTCATTGCGAGAAGGCCTCTATTTCAACCCTTACTTTCCCGGCCAGGCCATTGGCATGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| CDS TCA 72 bp | GGGTGGCCGATAAGCCAGCTTTCGACTCTTCAGGACTaGCCACTTATGCCGCTTCATGGCATAGGTCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: GWPISQLSTLQD*PLMPLHGIGQG Trigger: CCCCTGACCTATGCCATGAAGCGGCATAAGTGGTCAGTCCTGAAGAGTCGAAAGCTGGCTTATCGGCCACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| CDS TCA 72 bp | GAGACCCATGCGTTTTCGATGGTCATGCTCTGGTTCTaGTGCCCAGCGAAGGAAGGTGGCGACATCCTTAGC | + |
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Preference number: 6 (lower is better) Translates to: ETHAFSMVMLWF*CPAKEGGDILS Trigger: GCTAAGGATGTCGCCACCTTCCTTCGCTGGGCATCAGAACCAGAGCATGACCATCGAAAACGCATGGGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| CDS CCA 72 bp | TTCGACTCTTCAGGACTGACCACTTATGCCGCTTCATaGCATAGGTCAGGGGCAGCAGCAGGCCCATCATCA | + |
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Preference number: 6 (lower is better) Translates to: FDSSGLTTYAAS*HRSGAAAGPSS Trigger: TGATGATGGGCCTGCTGCTGCCCCTGACCTATGCCATGAAGCGGCATAAGTGGTCAGTCCTGAAGAGTCGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| CDS TCA 72 bp | CCAGCGAAGGAAGGTGGCGACATCCTTAGCTACTTGTaGCATGGTAGCTGGGGTGCCATCATCATACTCCAA | + |
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Preference number: 6 (lower is better) Translates to: PAKEGGDILSYL*HGSWGAIIILQ Trigger: TTGGAGTATGATGATGGCACCCCAGCTACCATGTCACAAGTAGCTAAGGATGTCGCCACCTTCCTTCGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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| CDS GCA 72 bp | AACAACATCTTGAGACCCATGCGTTTTCGATGGTCATaGTCTGGTTCTGATGCCCAGCGAAGGAAGGTGGCG | + |
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Preference number: 6 (lower is better) Translates to: NNILRPMRFRWS*SGSDAQRRKVA Trigger: CGCCACCTTCCTTCGCTGGGCATCAGAACCAGAGCATGACCATCGAAAACGCATGGGTCTCAAGATGTTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023210.8 |
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