Pregenerated sensors for CYBRD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027015Ensembl transcript IDs: ENSMUST00000028403.3
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCAGAAAGGGAAAGCAGCCCACGGAAGGGCAGCTTGGAAGCGTCTTaGGCAGCAAGACCAATGGGCTTCACAGAAGGCAACTGGGGAACT | + |
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Preference number: 1 (lower is better) Translates to: AERESSPRKGSLEAS*AARPMGFTEGNWGT Trigger: AGTTCCCCAGTTGCCTTCTGTGAAGCCCATTGGTCTTGCTGCCCAAGACGCTTCCAAGCTGCCCTTCCGTGGGCTGCTTTCCCTTTCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR CCA 90 bp | GCCCTGTTAAAGATTAGAAGGGCATCGAGGCAGGCTCTGGCTTGTTaGCAGTGGCTGAGACCCCAAGATCTCCGTCCAAATCTTTGTGGC | + |
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Preference number: 1 (lower is better) Translates to: ALLKIRRASRQALAC*QWLRPQDLRPNLCG Trigger: GCCACAAAGATTTGGACGGAGATCTTGGGGTCTCAGCCACTGCCAACAAGCCAGAGCCTGCCTCGATGCCCTTCTAATCTTTAACAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR CCA 90 bp | GAAGCGTCTTGGGCAGCAAGACCAATGGGCTTCACAGAAGGCAACTaGGGAACTACGTTAAGGGTGGCTTTAGAGATGTTGAGCCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: EASWAARPMGFTEGN*GTTLRVALEMLSQE Trigger: CTCCTGGCTCAACATCTCTAAAGCCACCCTTAACGTAGTTCCCCAGTTGCCTTCTGTGAAGCCCATTGGTCTTGCTGCCCAAGACGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR CCA 90 bp | CTCCTTTCCGTTTTCCATGTGCAGTCACGGTCAGTGGGTGAGCTCTaGGTCTTCCAGCCCGGCAGGGAAGAAAGCCTGATTAAAATGAGA | + |
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Preference number: 1 (lower is better) Translates to: LLSVFHVQSRSVGEL*VFQPGREESLIKMR Trigger: TCTCATTTTAATCAGGCTTTCTTCCCTGCCGGGCTGGAAGACCCAGAGCTCACCCACTGACCGTGACTGCACATGGAAAACGGAAAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR CCA 90 bp | TTGTTGGCAGTGGCTGAGACCCCAAGATCTCCGTCCAAATCTTTGTaGCGCCTTTCCCATCATCTAAGGTCCCTTGGAAGAGGACCAAAG | + |
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Preference number: 1 (lower is better) Translates to: LLAVAETPRSPSKSL*RLSHHLRSLGRGPK Trigger: CTTTGGTCCTCTTCCAAGGGACCTTAGATGATGGGAAAGGCGCCACAAAGATTTGGACGGAGATCTTGGGGTCTCAGCCACTGCCAACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR CCA 90 bp | AAAGATGGAACAGACTCAGAGCTGCAGAGGAGATCTTCCAAAATTTaGGCAGAAAGGGAAAGCAGCCCACGGAAGGGCAGCTTGGAAGCG | + |
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Preference number: 1 (lower is better) Translates to: KDGTDSELQRRSSKI*AERESSPRKGSLEA Trigger: CGCTTCCAAGCTGCCCTTCCGTGGGCTGCTTTCCCTTTCTGCCCAAATTTTGGAAGATCTCCTCTGCAGCTCTGAGTCTGTTCCATCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR TCA 90 bp | TGGACCATAGTGCTGCCAGTTAGAATAAATAGGGAAGGAGTGTGGTaGAATATAGGATCTTGGGCAGAGGAGCCAGACTGCCAGGGTTTG | + |
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Preference number: 1 (lower is better) Translates to: WTIVLPVRINREGVW*NIGSWAEEPDCQGL Trigger: CAAACCCTGGCAGTCTGGCTCCTCTGCCCAAGATCCTATATTTCACCACACTCCTTCCCTATTTATTCTAACTGGCAGCACTATGGTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR GCA 90 bp | AGCCCAAACTACCCGCTACAGGCATCATTTCAGCACAGTTATTACTaGAAGTTTCCATCGGAGCAGAGGGAGAAGTCTGGCCATGTGAAA | + |
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Preference number: 1 (lower is better) Translates to: SPNYPLQASFQHSYY*KFPSEQREKSGHVK Trigger: TTTCACATGGCCAGACTTCTCCCTCTGCTCCGATGGAAACTTGCAGTAATAACTGTGCTGAAATGATGCCTGTAGCGGGTAGTTTGGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR CCA 90 bp | AGGGTGCTACCAGTTCATCAGACAAGCCACCGGCAGCTACATCAATaGCCAGGGTCCTCAAGAGGAAAGAAGAAACAATCACTATTTATG | + |
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Preference number: 1 (lower is better) Translates to: RVLPVHQTSHRQLHQ*PGSSRGKKKQSLFM Trigger: CATAAATAGTGATTGTTTCTTCTTTCCTCTTGAGGACCCTGGCCATTGATGTAGCTGCCGGTGGCTTGTCTGATGAACTGGTAGCACCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR CCA 90 bp | AAGCACCCACCCCGCCTCCACCATGTTTTTCTCACAACATCAACGTaGCACAATGGTCCAAATCCTGCTCCAAGTATTTGTGATCATATT | + |
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Preference number: 1 (lower is better) Translates to: KHPPRLHHVFLTTST*HNGPNPAPSICDHI Trigger: AATATGATCACAAATACTTGGAGCAGGATTTGGACCATTGTGCCACGTTGATGTTGTGAGAAAAACATGGTGGAGGCGGGGTGGGTGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR CCA 90 bp | CCAAAAATGGGGAGAGTTAACAATACCTGTCTCACAGAGTCAGCCTaGAGACTGAAGGAGCTAATATTCGTAAAGCACAGAGTAAGAGCC | + |
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Preference number: 1 (lower is better) Translates to: PKMGRVNNTCLTESA*RLKELIFVKHRVRA Trigger: GGCTCTTACTCTGTGCTTTACGAATATTAGCTCCTTCAGTCTCCAGGCTGACTCTGTGAGACAGGTATTGTTAACTCTCCCCATTTTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR TCA 90 bp | GGCCAGGGTCCTCAAGAGGAAAGAAGAAACAATCACTATTTATGTTaGTCATGTCCGTTTACATTTGGTAAGTTCACAGGCCTCAGTCAA | + |
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Preference number: 1 (lower is better) Translates to: GQGPQEERRNNHYLC*SCPFTFGKFTGLSQ Trigger: TTGACTGAGGCCTGTGAACTTACCAAATGTAAACGGACATGATCAACATAAATAGTGATTGTTTCTTCTTTCCTCTTGAGGACCCTGGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR CCA 90 bp | ACATGTCCAAGGTCACCCTTAATTACACAAAGAGTGAGGACAACTTaGGTTACTAGAGAAACCAAAATCCCAAAAGAGAGTTTCACTATG | + |
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Preference number: 1 (lower is better) Translates to: TCPRSPLITQRVRTT*VTRETKIPKESFTM Trigger: CATAGTGAAACTCTCTTTTGGGATTTTGGTTTCTCTAGTAACCCAAGTTGTCCTCACTCTTTGTGTAATTAAGGGTGACCTTGGACATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR TCA 90 bp | AAGACCCGGGAAAGAGAAGGCTTTCATGTTGACGTAGATCATTGTTaGAATAAAGCTTTCTTTCCTGAAATTAGATTATGGGGTAAGCCA | + |
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Preference number: 1 (lower is better) Translates to: KTREREGFHVDVDHC*NKAFFPEIRLWGKP Trigger: TGGCTTACCCCATAATCTAATTTCAGGAAAGAAAGCTTTATTTCAACAATGATCTACGTCAACATGAAAGCCTTCTCTTTCCCGGGTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR-3UTR TCA 90 bp | CATGTGCAGTCACGGTCAGTGGGTGAGCTCTGGGTCTTCCAGCCCGGCAGGGAACTTGTTGGCAGTGGCTaGGACCCCAAGATCTCCGTC | + |
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Preference number: 2 (lower is better) Translates to: HVQSRSVGELWVFQPGRELVGSG*DPKISV Trigger: GACGGAGATCTTGGGGTCTCAGCCACTGCCAACAAG...TTCCCTGCCGGGCTGGAAGACCCAGAGCTCACCCACTGACCGTGACTGCACATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR-3UTR CCA 90 bp | CAGTCACGGTCAGTGGGTGAGCTCTGGGTCTTCCAGCCCGGCAGGGAAGAAAGCCCAGTGGCCAATGGCTaGGCAGAAAGAAAGAGGCGG | + |
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Preference number: 2 (lower is better) Translates to: QSRSVGELWVFQPGREESPVANG*AERKRR Trigger: CCGCCTCTTTCTTTCTGCCCAGCCATTGGCCACTGG...GCTTTCTTCCCTGCCGGGCTGGAAGACCCAGAGCTCACCCACTGACCGTGACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR-3UTR CCA 90 bp | CAGTCACGGTCAGTGGGTGAGCTCTGGGTCTTCCAGCCCGGCAGGGAAGAAAGCCCAAGACATGGTGGCTaGTGGCACATGCCTGTAACG | + |
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Preference number: 2 (lower is better) Translates to: QSRSVGELWVFQPGREESPRHGG*WHMPVT Trigger: CGTTACAGGCATGTGCCACCAGCCACCATGTCTTGG...GCTTTCTTCCCTGCCGGGCTGGAAGACCCAGAGCTCACCCACTGACCGTGACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR CAA 90 bp | GGCAGAAAGGGAAAGCAGCCCACGGAAGGGCAGCTTGGAAGCGTCTaGGGCAGCAAGACCAATGGGCTTCACAGAAGGCAACTGGGGAAC | + |
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Preference number: 2 (lower is better) Translates to: GRKGKQPTEGQLGSV*GSKTNGLHRRQLGN Trigger: GTTCCCCAGTTGCCTTCTGTGAAGCCCATTGGTCTTGCTGCCCAAGACGCTTCCAAGCTGCCCTTCCGTGGGCTGCTTTCCCTTTCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR-3UTR GCA 90 bp | CAGTCACGGTCAGTGGGTGAGCTCTGGGTCTTCCAGCCCGGCAGGGAAGAAAGCGCAGAGGAGCCAGACTaGCAGGGTTTGAATGTCAGT | + |
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Preference number: 2 (lower is better) Translates to: QSRSVGELWVFQPGREESAEEPD*QGLNVS Trigger: ACTGACATTCAAACCCTGGCAGTCTGGCTCCTCTGC...GCTTTCTTCCCTGCCGGGCTGGAAGACCCAGAGCTCACCCACTGACCGTGACTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR-3UTR CCA 90 bp | CAGTCACGGTCAGTGGGTGAGCTCTGGGTCTTCCAGCCCGGCAGGGAAGAAAGCAACCCAAGCCACCTATaGCTAGGTAGGAGAAGCTCA | + |
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Preference number: 2 (lower is better) Translates to: QSRSVGELWVFQPGREESNPSHL*LGRRSS Trigger: TGAGCTTCTCCTACCTAGCCATAGGTGGCTTGGGTT...GCTTTCTTCCCTGCCGGGCTGGAAGACCCAGAGCTCACCCACTGACCGTGACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR-3UTR TCA 90 bp | CATGTGCAGTCACGGTCAGTGGGTGAGCTCTGGGTCTTCCAGCCCGGCAGGGAAAGGGAAGGAGTGTGGTaGAATATAGGATCTTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: HVQSRSVGELWVFQPGREREGVW*NIGSWA Trigger: TGCCCAAGATCCTATATTTCACCACACTCCTTCCCT...TTCCCTGCCGGGCTGGAAGACCCAGAGCTCACCCACTGACCGTGACTGCACATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR-3UTR CCA 90 bp | CAGTCACGGTCAGTGGGTGAGCTCTGGGTCTTCCAGCCCGGCAGGGAAGAAAGCGACCGCATTATACATTaGCCTATGAACCCAAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: QSRSVGELWVFQPGREESDRIIH*PMNPSH Trigger: GTGGCTTGGGTTCATAGGCCAATGTATAATGCGGTC...GCTTTCTTCCCTGCCGGGCTGGAAGACCCAGAGCTCACCCACTGACCGTGACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR-3UTR CCA 90 bp | CAGTCACGGTCAGTGGGTGAGCTCTGGGTCTTCCAGCCCGGCAGGGAAGAAAGCATCAACGTGGCACAATaGTCCAAATCCTGCTCCAAG | + |
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Preference number: 2 (lower is better) Translates to: QSRSVGELWVFQPGREESINVAQ*SKSCSK Trigger: CTTGGAGCAGGATTTGGACCATTGTGCCACGTTGAT...GCTTTCTTCCCTGCCGGGCTGGAAGACCCAGAGCTCACCCACTGACCGTGACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR-3UTR TCA 90 bp | CAGTCACGGTCAGTGGGTGAGCTCTGGGTCTTCCAGCCCGGCAGGGAAGAAAGCAGATTCTTGCAGGCTTaGGAGAAGAGAAGGCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: QSRSVGELWVFQPGREESRFLQA*EKRRQK Trigger: TTTCTGCCTTCTCTTCTCTCAAGCCTGCAAGAATCT...GCTTTCTTCCCTGCCGGGCTGGAAGACCCAGAGCTCACCCACTGACCGTGACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR-3UTR GCA 90 bp | CAGTCACGGTCAGTGGGTGAGCTCTGGGTCTTCCAGCCCGGCAGGGAAGAAAGCGATCTGGGGCATGTTTaGATTGCAAGAGGTTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: QSRSVGELWVFQPGREESDLGHV*IARGSE Trigger: TTCTGAACCTCTTGCAATGCAAACATGCCCCAGATC...GCTTTCTTCCCTGCCGGGCTGGAAGACCCAGAGCTCACCCACTGACCGTGACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR-3UTR GCA 90 bp | CAGTCACGGTCAGTGGGTGAGCTCTGGGTCTTCCAGCCCGGCAGGGAAGAAAGCGAACAGACTCAGAGCTaGAGAGGAGATCTTCCAAAA | + |
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Preference number: 2 (lower is better) Translates to: QSRSVGELWVFQPGREESEQTQS*RGDLPK Trigger: TTTTGGAAGATCTCCTCTGCAGCTCTGAGTCTGTTC...GCTTTCTTCCCTGCCGGGCTGGAAGACCCAGAGCTCACCCACTGACCGTGACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR-3UTR CCA 90 bp | CATGTGCAGTCACGGTCAGTGGGTGAGCTCTGGGTCTTCCAGCCCGGCAGGGAAGCAGAGGGAGAAGTCTaGCCATGTGAAAGATTATCA | + |
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Preference number: 2 (lower is better) Translates to: HVQSRSVGELWVFQPGREAEGEV*PCERLS Trigger: TGATAATCTTTCACATGGCCAGACTTCTCCCTCTGC...TTCCCTGCCGGGCTGGAAGACCCAGAGCTCACCCACTGACCGTGACTGCACATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR CAA 90 bp | GGCTTGTTGGCAGTGGCTGAGACCCCAAGATCTCCGTCCAAATCTTaGTGGCGCCTTTCCCATCATCTAAGGTCCCTTGGAAGAGGACCA | + |
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Preference number: 2 (lower is better) Translates to: GLLAVAETPRSPSKS*WRLSHHLRSLGRGP Trigger: TGGTCCTCTTCCAAGGGACCTTAGATGATGGGAAAGGCGCCACAAAGATTTGGACGGAGATCTTGGGGTCTCAGCCACTGCCAACAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR CAA 90 bp | CAGGGCCTTTGTGAGCCCAAATTAGCGGGAGAGGGAACTAGATACTaGGCTAAAGCACCCACCCCGCCTCCACCATGTTTTTCTCACAAC | + |
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Preference number: 2 (lower is better) Translates to: QGLCEPKLAGEGTRY*AKAPTPPPPCFSHN Trigger: GTTGTGAGAAAAACATGGTGGAGGCGGGGTGGGTGCTTTAGCCAAGTATCTAGTTCCCTCTCCCGCTAATTTGGGCTCACAAAGGCCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR CAA 90 bp | GAAAGATGGAACAGACTCAGAGCTGCAGAGGAGATCTTCCAAAATTaGGGCAGAAAGGGAAAGCAGCCCACGGAAGGGCAGCTTGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: ERWNRLRAAEEIFQN*GRKGKQPTEGQLGS Trigger: GCTTCCAAGCTGCCCTTCCGTGGGCTGCTTTCCCTTTCTGCCCAAATTTTGGAAGATCTCCTCTGCAGCTCTGAGTCTGTTCCATCTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR-3UTR GCA 90 bp | CAGTCACGGTCAGTGGGTGAGCTCTGGGTCTTCCAGCCCGGCAGGGAAGAAAGCCTATTAGCTTTCATCTaGAACTTCATTCATAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: QSRSVGELWVFQPGREESLLAFI*NFIHRW Trigger: CCACCTATGAATGAAGTTGCAGATGAAAGCTAATAG...GCTTTCTTCCCTGCCGGGCTGGAAGACCCAGAGCTCACCCACTGACCGTGACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR-3UTR TCA 90 bp | CTACCTCTCAAGCAGCTGGTGCCCAAATGTCTTAATCAGAAACTGCGCCGAAACTGTGTGCCTTTCATCTaGGGATCCGAGAGAGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: LPLKQLVPKCLNQKLRRNCVPFI*GSERAP Trigger: AGGAGCTCTCTCGGATCCTCAGATGAAAGGCACACA...GTTTCGGCGCAGTTTCTGATTAAGACATTTGGGCACCAGCTGCTTGAGAGGTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR-3UTR TCA 90 bp | GAGAAGGCAGAAAAGGGAGAATCAAGGTACTTGGGGGAGAAAGATGGAACAGACGGAAATCCTCCTTGGTaGCCGCATTATACATTGGCC | + |
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Preference number: 2 (lower is better) Translates to: EKAEKGESRYLGEKDGTDGNPPW*PHYTLA Trigger: GGCCAATGTATAATGCGGTCACCAAGGAGGATTTCC...GTCTGTTCCATCTTTCTCCCCCAAGTACCTTGATTCTCCCTTTTCTGCCTTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR-3UTR CCA 90 bp | GGAGCCAGACTGCCAGGGTTTGAATGTCAGTTCCATCAATTAAAGAGTTGTGTGAGGAGTAACAGACCCTaGACTGAGTGTTACCGCATC | + |
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Preference number: 2 (lower is better) Translates to: GARLPGFECQFHQLKSCVRSNRP*TECYRI Trigger: GATGCGGTAACACTCAGTCCAGGGTCTGTTACTCCT...CACACAACTCTTTAATTGATGGAACTGACATTCAAACCCTGGCAGTCTGGCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR-3UTR TCA 90 bp | AGCATTTGGGAAGTGAGGACAAGGAGAACCACATGTCCAAGGTCACCCTTAATTTTATACATTGGCCTATaGACCCAAGCCACCTATGGC | + |
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Preference number: 2 (lower is better) Translates to: SIWEVRTRRTTCPRSPLILYIGL*TQATYG Trigger: GCCATAGGTGGCTTGGGTTCATAGGCCAATGTATAA...AATTAAGGGTGACCTTGGACATGTGGTTCTCCTTGTCCTCACTTCCCAAATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR-3UTR CCA 90 bp | GGAGCCAGACTGCCAGGGTTTGAATGTCAGTTCCATCAATTAAAGAGTTGTGTGTTACGGGGCTTGATCTaGGGCATGTTTGCATTGCAA | + |
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Preference number: 2 (lower is better) Translates to: GARLPGFECQFHQLKSCVLRGLI*GMFALQ Trigger: TTGCAATGCAAACATGCCCCAGATCAAGCCCCGTAA...CACACAACTCTTTAATTGATGGAACTGACATTCAAACCCTGGCAGTCTGGCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR-3UTR TCA 90 bp | AGCATTTGGGAAGTGAGGACAAGGAGAACCACATGTCCAAGGTCACCCTTAATTGCAGAGGAGTGGTTCTaGTGCTTAGATTTAATCAGG | + |
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Preference number: 2 (lower is better) Translates to: SIWEVRTRRTTCPRSPLIAEEWF*CLDLIR Trigger: CCTGATTAAATCTAAGCATCAGAACCACTCCTCTGC...AATTAAGGGTGACCTTGGACATGTGGTTCTCCTTGTCCTCACTTCCCAAATGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR CAA 90 bp | GGAGCTAATATTCGTAAAGCACAGAGTAAGAGCCAGGGAAGCACTTaGGAAAATAAAAACAGAAACCCGAGGGCACCTTTCTCAGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: GANIRKAQSKSQGST*ENKNRNPRAPFSVC Trigger: ACACACTGAGAAAGGTGCCCTCGGGTTTCTGTTTTTATTTTCCAAAGTGCTTCCCTGGCTCTTACTCTGTGCTTTACGAATATTAGCTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR-3UTR GCA 90 bp | GTCCTAGGAAAAGACAGCCCAGGATATATGTGTCTCCAAACAAAAATGTGTTCAGACTTTGGAAGAGAATaGACATGGCTGTATCGACAT | + |
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Preference number: 2 (lower is better) Translates to: VLGKDSPGYMCLQTKMCSDFGRE*TWLYRH Trigger: ATGTCGATACAGCCATGTGCATTCTCTTCCAAAGTC...TGAACACATTTTTGTTTGGAGACACATATATCCTGGGCTGTCTTTTCCTAGGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR CAA 90 bp | AAAAGTATGCCTGCCTTAATCTATCATTTCATGGAGAGGTCCCAGTaGCTGTTTCTAAGTGCACAGATTAAACAAAAACCACACTCCTTA | + |
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Preference number: 2 (lower is better) Translates to: KSMPALIYHFMERSQ*LFLSAQIKQKPHSL Trigger: TAAGGAGTGTGGTTTTTGTTTAATCTGTGCACTTAGAAACAGCAACTGGGACCTCTCCATGAAATGATAGATTAAGGCAGGCATACTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR CAA 90 bp | CCTTCAGAAAACAGAAACTACTTGTCACCATCCTTAAGAAACTACTaGTCACCAGTCCTTAAAAAGTATGCCTGCCTTAATCTATCATTT | + |
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Preference number: 2 (lower is better) Translates to: PSENRNYLSPSLRNY*SPVLKKYACLNLSF Trigger: AAATGATAGATTAAGGCAGGCATACTTTTTAAGGACTGGTGACAAGTAGTTTCTTAAGGATGGTGACAAGTAGTTTCTGTTTTCTGAAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR CAA 90 bp | AAAGAAGAAACAATCACTATTTATGTTGATCATGTCCGTTTACATTaGGTAAGTTCACAGGCCTCAGTCAACACAATTACTCTCAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: KEETITIYVDHVRLH*VSSQASVNTITLRK Trigger: TTTCCTGAGAGTAATTGTGTTGACTGAGGCCTGTGAACTTACCAAATGTAAACGGACATGATCAACATAAATAGTGATTGTTTCTTCTTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR TCA 72 bp | GGGCATCGAGGCAGGCTCTGGCTTGTTGGCAGTGGCTaGGACCCCAAGATCTCCGTCCAAATCTTTGTGGCG | + |
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Preference number: 3 (lower is better) Translates to: GHRGRLWLVGSG*DPKISVQIFVA Trigger: CGCCACAAAGATTTGGACGGAGATCTTGGGGTCTCAGCCACTGCCAACAAGCCAGAGCCTGCCTCGATGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR CCA 72 bp | GGGCAGAAAGGGAAAGCAGCCCACGGAAGGGCAGCTTaGAAGCGTCTTGGGCAGCAAGACCAATGGGCTTCA | + |
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Preference number: 3 (lower is better) Translates to: GQKGKAAHGRAA*KRLGQQDQWAS Trigger: TGAAGCCCATTGGTCTTGCTGCCCAAGACGCTTCCAAGCTGCCCTTCCGTGGGCTGCTTTCCCTTTCTGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR CCA 72 bp | TCCTCCTTTCCGTTTTCCATGTGCAGTCACGGTCAGTaGGTGAGCTCTGGGTCTTCCAGCCCGGCAGGGAAG | + |
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Preference number: 3 (lower is better) Translates to: SSFPFSMCSHGQ*VSSGSSSPAGK Trigger: CTTCCCTGCCGGGCTGGAAGACCCAGAGCTCACCCACTGACCGTGACTGCACATGGAAAACGGAAAGGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR-3UTR CAA 90 bp | CATGTGCAGTCACGGTCAGTGGGTGAGCTCTGGGTCTTCCAGCCCGGCAGGGAACCTGTAACGCAGCATTaGGGAAGTGAGGACAAGGAG | + |
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Preference number: 3 (lower is better) Translates to: HVQSRSVGELWVFQPGREPVTQH*GSEDKE Trigger: CTCCTTGTCCTCACTTCCCAAATGCTGCGTTACAGG...TTCCCTGCCGGGCTGGAAGACCCAGAGCTCACCCACTGACCGTGACTGCACATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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| 3UTR TCA 72 bp | CCTTTCCGTTTTCCATGTGCAGTCACGGTCAGTGGGTaGGCTCTGGGTCTTCCAGCCCGGCAGGGAAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: PFRFPCAVTVSG*ALGLPARQGRK Trigger: CTTTCTTCCCTGCCGGGCTGGAAGACCCAGAGCTCACCCACTGACCGTGACTGCACATGGAAAACGGAAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| 3UTR CCA 72 bp | GTGTGTGCCTTTCATCTGAGGATCCGAGAGAGCTCCTaGGCAGGTACGAGCCTGCGACTTGCTAGGAGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: VCAFHLRIRESS*AGTSLRLARSS Trigger: TGAGCTCCTAGCAAGTCGCAGGCTCGTACCTGCCCAGGAGCTCTCTCGGATCCTCAGATGAAAGGCACACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| 3UTR CCA 72 bp | GAAAGCAGCCCACGGAAGGGCAGCTTGGAAGCGTCTTaGGCAGCAAGACCAATGGGCTTCACAGAAGGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: ESSPRKGSLEAS*AARPMGFTEGN Trigger: GTTGCCTTCTGTGAAGCCCATTGGTCTTGCTGCCCAAGACGCTTCCAAGCTGCCCTTCCGTGGGCTGCTTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| 3UTR GCA 72 bp | AACAGAAACCCGAGGGCACCTTTCTCAGTGTGTGGATaGGAGACCGGTTTACGGGGCTTGATCTGGGGCATG | + |
|
Preference number: 3 (lower is better) Translates to: NRNPRAPFSVCG*ETGLRGLIWGM Trigger: CATGCCCCAGATCAAGCCCCGTAAACCGGTCTCGCATCCACACACTGAGAAAGGTGCCCTCGGGTTTCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| 3UTR CCA 72 bp | AGAAGGGCATCGAGGCAGGCTCTGGCTTGTTGGCAGTaGCTGAGACCCCAAGATCTCCGTCCAAATCTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: RRASRQALACWQ*LRPQDLRPNLC Trigger: ACAAAGATTTGGACGGAGATCTTGGGGTCTCAGCCACTGCCAACAAGCCAGAGCCTGCCTCGATGCCCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| 3UTR CCA 72 bp | AAGATTAGAAGGGCATCGAGGCAGGCTCTGGCTTGTTaGCAGTGGCTGAGACCCCAAGATCTCCGTCCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: KIRRASRQALAC*QWLRPQDLRPN Trigger: ATTTGGACGGAGATCTTGGGGTCTCAGCCACTGCCAACAAGCCAGAGCCTGCCTCGATGCCCTTCTAATCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| 3UTR CCA 72 bp | ACAGACTCAGAGCTGCAGAGGAGATCTTCCAAAATTTaGGCAGAAAGGGAAAGCAGCCCACGGAAGGGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: TDSELQRRSSKI*AERESSPRKGS Trigger: GCTGCCCTTCCGTGGGCTGCTTTCCCTTTCTGCCCAAATTTTGGAAGATCTCCTCTGCAGCTCTGAGTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| 3UTR-3UTR CAA 90 bp | CAGTCACGGTCAGTGGGTGAGCTCTGGGTCTTCCAGCCCGGCAGGGAAGAAAGCAGCCAGGGAAGCACTTaGGAAAATAAAAACAGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: QSRSVGELWVFQPGREESSQGST*ENKNRN Trigger: GTTTCTGTTTTTATTTTCCAAAGTGCTTCCCTGGCT...GCTTTCTTCCCTGCCGGGCTGGAAGACCCAGAGCTCACCCACTGACCGTGACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| 3UTR TCA 72 bp | TACGAGAGGAAAGTGCCATGGAGGGTGGGCTCTGTTTaGCACAGCACAGGGAAGCTGTACCTTTTTGACGAC | + |
|
Preference number: 3 (lower is better) Translates to: YERKVPWRVGSV*HSTGKLYLFDD Trigger: GTCGTCAAAAAGGTACAGCTTCCCTGTGCTGTGTCAAACAGAGCCCACCCTCCATGGCACTTTCCTCTCGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| 3UTR-3UTR CAA 90 bp | GGAAAAGACAGCCCAGGATATATGTGTCTCCAAACAAAAATGTGTTCAGCAGCTGCAGGCTCTGGCTTGTaGGCAGTGGCTGAGACCCCA | + |
|
Preference number: 3 (lower is better) Translates to: GKDSPGYMCLQTKMCSAAAGSGL*AVAETP Trigger: TGGGGTCTCAGCCACTGCCAACAAGCCAGAGCCTGC...AGCTGCTGAACACATTTTTGTTTGGAGACACATATATCCTGGGCTGTCTTTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| 3UTR-3UTR CAA 90 bp | GGAAAAGACAGCCCAGGATATATGTGTCTCCAAACAAAAATGTGTTCAGCAGCTGAGGCAGGCTCTGGCTaGTTGGCAGTGGCTGAGACC | + |
|
Preference number: 3 (lower is better) Translates to: GKDSPGYMCLQTKMCSAAEAGSG*LAVAET Trigger: GGTCTCAGCCACTGCCAACAAGCCAGAGCCTGCCTC...AGCTGCTGAACACATTTTTGTTTGGAGACACATATATCCTGGGCTGTCTTTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| 3UTR-3UTR CAA 90 bp | TATAATATTACCCTCCCATTAGCCCACTTGGGAGAAAAGGAAGGGCTGAGAGGATTGCCCAGGCTGGCCTaGAACTCTGCCTCAGATAGC | + |
|
Preference number: 3 (lower is better) Translates to: YNITLPLAHLGEKEGLRGLPRLA*NSASDS Trigger: GCTATCTGAGGCAGAGTTCAAGGCCAGCCTGGGCAA...TCCTCTCAGCCCTTCCTTTTCTCCCAAGTGGGCTAATGGGAGGGTAATATTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| 3UTR CCA 72 bp | TGGGCAGCAAGACCAATGGGCTTCACAGAAGGCAACTaGGGAACTACGTTAAGGGTGGCTTTAGAGATGTTG | + |
|
Preference number: 3 (lower is better) Translates to: WAARPMGFTEGN*GTTLRVALEML Trigger: CAACATCTCTAAAGCCACCCTTAACGTAGTTCCCCAGTTGCCTTCTGTGAAGCCCATTGGTCTTGCTGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| 3UTR CCA 72 bp | TTAAAAGACAGAGCTGTGCCAAGACATGGTGGCTGGTaGCACATGCCTGTAACGCAGCATTTGGGAAGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: LKDRAVPRHGGW*HMPVTQHLGSE Trigger: CTCACTTCCCAAATGCTGCGTTACAGGCATGTGCCACCAGCCACCATGTCTTGGCACAGCTCTGTCTTTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| 3UTR GCA 72 bp | TACCCGCTACAGGCATCATTTCAGCACAGTTATTACTaGAAGTTTCCATCGGAGCAGAGGGAGAAGTCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: YPLQASFQHSYY*KFPSEQREKSG Trigger: GCCAGACTTCTCCCTCTGCTCCGATGGAAACTTGCAGTAATAACTGTGCTGAAATGATGCCTGTAGCGGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| 3UTR GCA 72 bp | GGTACTTGGGGGAGAAAGATGGAACAGACTCAGAGCTaGAGAGGAGATCTTCCAAAATTTGGGCAGAAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: GTWGRKMEQTQS*RGDLPKFGQKG Trigger: CCCTTTCTGCCCAAATTTTGGAAGATCTCCTCTGCAGCTCTGAGTCTGTTCCATCTTTCTCCCCCAAGTACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| 3UTR CCA 72 bp | CGCATTATACATTGGCCTATGAACCCAAGCCACCTATaGCTAGGTAGGAGAAGCTCAACTGTAGGGCTGACT | + |
|
Preference number: 3 (lower is better) Translates to: RIIHWPMNPSHL*LGRRSSTVGLT Trigger: AGTCAGCCCTACAGTTGAGCTTCTCCTACCTAGCCATAGGTGGCTTGGGTTCATAGGCCAATGTATAATGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| 3UTR CCA 72 bp | TCTCAGGAAATCCTCCTTGGTGACCGCATTATACATTaGCCTATGAACCCAAGCCACCTATGGCTAGGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: SQEILLGDRIIH*PMNPSHLWLGR Trigger: CCTACCTAGCCATAGGTGGCTTGGGTTCATAGGCCAATGTATAATGCGGTCACCAAGGAGGATTTCCTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| 3UTR CCA 72 bp | CCAGTTCATCAGACAAGCCACCGGCAGCTACATCAATaGCCAGGGTCCTCAAGAGGAAAGAAGAAACAATCA | + |
|
Preference number: 3 (lower is better) Translates to: PVHQTSHRQLHQ*PGSSRGKKKQS Trigger: TGATTGTTTCTTCTTTCCTCTTGAGGACCCTGGCCATTGATGTAGCTGCCGGTGGCTTGTCTGATGAACTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| 3UTR-3UTR CAA 90 bp | GTCTTGGGCAGCAAGACCAATGGGCTTCACAGAAGGCAACTGGGGAACTACGTTCCATCAATTAAAGAGTaGTGTGATGCTGAGCCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: VLGSKTNGLHRRQLGNYVPSIKE*CDAEPS Trigger: ACTTGGCTCAGCATCACACAACTCTTTAATTGATGG...AACGTAGTTCCCCAGTTGCCTTCTGTGAAGCCCATTGGTCTTGCTGCCCAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| 3UTR TCA 72 bp | TTTAAAAATGAGCTAATTGTGTGTGTGCCTTTCATCTaGGGATCCGAGAGAGCTCCTGGGCAGGTACGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: FKNELIVCVPFI*GSERAPGQVRA Trigger: GGCTCGTACCTGCCCAGGAGCTCTCTCGGATCCTCAGATGAAAGGCACACACACAATTAGCTCATTTTTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| 3UTR GCA 72 bp | TCAAGCAGCTGGTGCCCAAATGTCTTAATCAGAAACTaGGCCGAAACCAAAAACCAACCAGTCTGCAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SSSWCPNVLIRN*AETKNQPVCRR Trigger: CCTTCTGCAGACTGGTTGGTTTTTGGTTTCGGCGCAGTTTCTGATTAAGACATTTGGGCACCAGCTGCTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| 3UTR CCA 72 bp | CCCCGCCTCCACCATGTTTTTCTCACAACATCAACGTaGCACAATGGTCCAAATCCTGCTCCAAGTATTTGT | + |
|
Preference number: 3 (lower is better) Translates to: PRLHHVFLTTST*HNGPNPAPSIC Trigger: ACAAATACTTGGAGCAGGATTTGGACCATTGTGCCACGTTGATGTTGTGAGAAAAACATGGTGGAGGCGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| 3UTR CCA 72 bp | TTGAACTCTGCCTCAGATAGCTACCTCTCAAGCAGCTaGTGCCCAAATGTCTTAATCAGAAACTGCGCCGAA | + |
|
Preference number: 3 (lower is better) Translates to: LNSASDSYLSSS*CPNVLIRNCAE Trigger: TTCGGCGCAGTTTCTGATTAAGACATTTGGGCACCAGCTGCTTGAGAGGTAGCTATCTGAGGCAGAGTTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| 3UTR CCA 72 bp | TATTTAAAAGACAGAGCTGTGCCAAGACATGGTGGCTaGTGGCACATGCCTGTAACGCAGCATTTGGGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: YLKDRAVPRHGG*WHMPVTQHLGS Trigger: ACTTCCCAAATGCTGCGTTACAGGCATGTGCCACCAGCCACCATGTCTTGGCACAGCTCTGTCTTTTAAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| 3UTR-3UTR CAA 90 bp | GGAGCCAGACTGCCAGGGTTTGAATGTCAGTTCCATCAATTAAAGAGTTGTGTGACTGTAGGGCTGACTTaGGAAGAGAATGCACATGGC | + |
|
Preference number: 3 (lower is better) Translates to: GARLPGFECQFHQLKSCVTVGLT*EENAHG Trigger: GCCATGTGCATTCTCTTCCAAAGTCAGCCCTACAGT...CACACAACTCTTTAATTGATGGAACTGACATTCAAACCCTGGCAGTCTGGCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| 3UTR-3UTR CAA 90 bp | GTCCTAGGAAAAGACAGCCCAGGATATATGTGTCTCCAAACAAAAATGTGTTCAGAGGGAACTAGATACTaGGCTAAAGCACCCACCCCG | + |
|
Preference number: 3 (lower is better) Translates to: VLGKDSPGYMCLQTKMCSEGTRY*AKAPTP Trigger: CGGGGTGGGTGCTTTAGCCAAGTATCTAGTTCCCTC...TGAACACATTTTTGTTTGGAGACACATATATCCTGGGCTGTCTTTTCCTAGGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| 3UTR TCA 72 bp | AGTTTCCATCGGAGCAGAGGGAGAAGTCTGGCCATGTaGAAGATTATCACTTCTAAACCTCAGCTCTCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: SFHRSRGRSLAM*KIITSKPQLSA Trigger: TGCAGAGAGCTGAGGTTTAGAAGTGATAATCTTTCACATGGCCAGACTTCTCCCTCTGCTCCGATGGAAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| 3UTR CCA 72 bp | TTTTTATTTAAAAGACAGAGCTGTGCCAAGACATGGTaGCTGGTGGCACATGCCTGTAACGCAGCATTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: FLFKRQSCAKTW*LVAHACNAAFG Trigger: CCCAAATGCTGCGTTACAGGCATGTGCCACCAGCCACCATGTCTTGGCACAGCTCTGTCTTTTAAATAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| 3UTR GCA 72 bp | CCGAAACCAAAAACCAACCAGTCTGCAGAAGGCATCTaGAGAGGAGTGGTTCTGATGCTTAGATTTAATCAG | + |
|
Preference number: 3 (lower is better) Translates to: PKPKTNQSAEGI*RGVVLMLRFNQ Trigger: CTGATTAAATCTAAGCATCAGAACCACTCCTCTGCAGATGCCTTCTGCAGACTGGTTGGTTTTTGGTTTCGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| 3UTR-3UTR CAA 90 bp | GGAAAAGACAGCCCAGGATATATGTGTCTCCAAACAAAAATGTGTTCAGCAGCTCCAGACTGCCAGGGTTaGAATGTCAGTTCCATCAAT | + |
|
Preference number: 3 (lower is better) Translates to: GKDSPGYMCLQTKMCSAAPDCQG*NVSSIN Trigger: ATTGATGGAACTGACATTCAAACCCTGGCAGTCTGG...AGCTGCTGAACACATTTTTGTTTGGAGACACATATATCCTGGGCTGTCTTTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| 3UTR TCA 72 bp | ACCAGTCTGCAGAAGGCATCTGCAGAGGAGTGGTTCTaGTGCTTAGATTTAATCAGGAATCTGTGTTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: TSLQKASAEEWF*CLDLIRNLCFL Trigger: CAGAAAACACAGATTCCTGATTAAATCTAAGCATCAGAACCACTCCTCTGCAGATGCCTTCTGCAGACTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| 3UTR GCA 72 bp | AGAAACTACTTGTCACCAGTCCTTAAAAAGTATGCCTaGCTTAATCTATCATTTCATGGAGAGGTCCCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: RNYLSPVLKKYA*LNLSFHGEVPV Trigger: AACTGGGACCTCTCCATGAAATGATAGATTAAGGCAGGCATACTTTTTAAGGACTGGTGACAAGTAGTTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| 3UTR CCA 72 bp | AGGTCACCCTTAATTACACAAAGAGTGAGGACAACTTaGGTTACTAGAGAAACCAAAATCCCAAAAGAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: RSPLITQRVRTT*VTRETKIPKES Trigger: ACTCTCTTTTGGGATTTTGGTTTCTCTAGTAACCCAAGTTGTCCTCACTCTTTGTGTAATTAAGGGTGACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| 3UTR TCA 72 bp | CCTCAAGAGGAAAGAAGAAACAATCACTATTTATGTTaGTCATGTCCGTTTACATTTGGTAAGTTCACAGGC | + |
|
Preference number: 3 (lower is better) Translates to: PQEERRNNHYLC*SCPFTFGKFTG Trigger: GCCTGTGAACTTACCAAATGTAAACGGACATGATCAACATAAATAGTGATTGTTTCTTCTTTCCTCTTGAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| 3UTR GCA 72 bp | AATCAGGAATCTGTGTTTTCTGAAGCTGGAGGTCTTTaGCTCCAATTGGTTTTTGATCTATCAATAAAGATG | + |
|
Preference number: 3 (lower is better) Translates to: NQESVFSEAGGL*LQLVFDLSIKM Trigger: CATCTTTATTGATAGATCAAAAACCAATTGGAGGCAAAGACCTCCAGCTTCAGAAAACACAGATTCCTGATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS-3UTR TCA 90 bp | CAGTCACGGTCAGTGGGTGAGCTCTGGGTCTTCCAGCCCGGCAGGGAAGAAAGCCAGCCACCACGGAGATaGTGGCGAGGATGGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QSRSVGELWVFQPGREESQPPRR*WRGWQP Trigger: TGGCTGCCATCCTCGCCATCATCTCCGTGGTGGCTG...GCTTTCTTCCCTGCCGGGCTGGAAGACCCAGAGCTCACCCACTGACCGTGACTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS-3UTR GCA 90 bp | CATGTGCAGTCACGGTCAGTGGGTGAGCTCTGGGTCTTCCAGCCCGGCAGGGAATGGCGCCTTCCATTCTaGATTCTGCATTGCCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: HVQSRSVGELWVFQPGREWRLPF*ILHCLH Trigger: ATGGAGGCAATGCAGAATGCAGAATGGAAGGCGCCA...TTCCCTGCCGGGCTGGAAGACCCAGAGCTCACCCACTGACCGTGACTGCACATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS-3UTR TCA 90 bp | GTCTTGGGCAGCAAGACCAATGGGCTTCACAGAAGGCAACTGGGGAACTACGTTTGCTCCCTCACTGCTTaGCTCTGCGTCAGCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLGSKTNGLHRRQLGNYVCSLTA*LCVSWV Trigger: GACCCAGCTGACGCAGAGTCAAGCAGTGAGGGAGCA...AACGTAGTTCCCCAGTTGCCTTCTGTGAAGCCCATTGGTCTTGCTGCCCAAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS-3UTR GCA 90 bp | GTCTTGGGCAGCAAGACCAATGGGCTTCACAGAAGGCAACTGGGGAACTACGTTAGTCCAACCCAGCTGTaGAGGCTGTACATGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VLGSKTNGLHRRQLGNYVSPTQL*RLYMWG Trigger: CCCCCACATGTACAGCCTGCACAGCTGGGTTGGACT...AACGTAGTTCCCCAGTTGCCTTCTGTGAAGCCCATTGGTCTTGCTGCCCAAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS-3UTR CCA 90 bp | GTCTTGGGCAGCAAGACCAATGGGCTTCACAGAAGGCAACTGGGGAACTACGTTATGATGGCGATGCCCTaGATGAAGACGAAGCCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLGSKTNGLHRRQLGNYVMMAMP*MKTKPV Trigger: GACCGGCTTCGTCTTCATCCAGGGCATCGCCATCAT...AACGTAGTTCCCCAGTTGCCTTCTGTGAAGCCCATTGGTCTTGCTGCCCAAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| 3UTR CAA 72 bp | CATGGTGGCTGGTGGCACATGCCTGTAACGCAGCATTaGGGAAGTGAGGACAAGGAGAACCACATGTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: HGGWWHMPVTQH*GSEDKENHMSK Trigger: CTTGGACATGTGGTTCTCCTTGTCCTCACTTCCCAAATGCTGCGTTACAGGCATGTGCCACCAGCCACCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS-3UTR TCA 90 bp | GGCAGCTACATCAATGGCCAGGGTCCTCAAGAGGAAAGAAGAAACAATCACTATTGGCGATGCCCTGGATaGAGACGAAGCCGGTCACCG | + |
|
Preference number: 4 (lower is better) Translates to: GSYINGQGPQEERRNNHYWRCPG*RRSRSP Trigger: CGGTGACCGGCTTCGTCTTCATCCAGGGCATCGCCA...ATAGTGATTGTTTCTTCTTTCCTCTTGAGGACCCTGGCCATTGATGTAGCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS-3UTR CCA 90 bp | GTCTTGGGCAGCAAGACCAATGGGCTTCACAGAAGGCAACTGGGGAACTACGTTTTGCCTCCATTTAGCTaGAGAGGGACAGAGCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VLGSKTNGLHRRQLGNYVLPPFS*RGTEPG Trigger: ACCAGGCTCTGTCCCTCTCCAGCTAAATGGAGGCAA...AACGTAGTTCCCCAGTTGCCTTCTGTGAAGCCCATTGGTCTTGCTGCCCAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| 3UTR CAA 72 bp | TGTGAGCCCAAATTAGCGGGAGAGGGAACTAGATACTaGGCTAAAGCACCCACCCCGCCTCCACCATGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CEPKLAGEGTRY*AKAPTPPPPCF Trigger: AAAACATGGTGGAGGCGGGGTGGGTGCTTTAGCCAAGTATCTAGTTCCCTCTCCCGCTAATTTGGGCTCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS-3UTR TCA 90 bp | CTACCTCTCAAGCAGCTGGTGCCCAAATGTCTTAATCAGAAACTGCGCCGAAACAGTGCAGGACCCAGATaGGCACGAAGATCACCGACA | + |
|
Preference number: 4 (lower is better) Translates to: LPLKQLVPKCLNQKLRRNSAGPR*ARRSPT Trigger: TGTCGGTGATCTTCGTGCTCATCTGGGTCCTGCACT...GTTTCGGCGCAGTTTCTGATTAAGACATTTGGGCACCAGCTGCTTGAGAGGTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS-3UTR GCA 90 bp | TATAATATTACCCTCCCATTAGCCCACTTGGGAGAAAAGGAAGGGCTGAGAGGATATGGGCATGACGATTaGCCGGAGAGAGGGCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YNITLPLAHLGEKEGLRGYGHDD*PERGRS Trigger: GCTCCGCCCTCTCTCCGGGCAATCGTCATGCCCATA...TCCTCTCAGCCCTTCCTTTTCTCCCAAGTGGGCTAATGGGAGGGTAATATTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS-3UTR GCA 90 bp | GCCAAGTTACCAACCTTTCCAAAAATGGGGAGAGTTAACAATACCTGTCTCACAAGCCCCTCTCGGAAGTaGAGGACCCAGATGAGCACG | + |
|
Preference number: 4 (lower is better) Translates to: AKLPTFPKMGRVNNTCLTSPSRK*RTQMST Trigger: CGTGCTCATCTGGGTCCTGCACTTCCGAGAGGGGCT...TGTGAGACAGGTATTGTTAACTCTCCCCATTTTTGGAAAGGTTGGTAACTTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS-3UTR CCA 90 bp | GAGAAGGCAGAAAAGGGAGAATCAAGGTACTTGGGGGAGAAAGATGGAACAGACAGAGGGCGGAGCCCATaGAAGCAGAAAGACGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: EKAEKGESRYLGEKDGTDRGRSP*KQKDEK Trigger: TTTTTCGTCTTTCTGCTTCCATGGGCTCCGCCCTCT...GTCTGTTCCATCTTTCTCCCCCAAGTACCTTGATTCTCCCTTTTCTGCCTTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS-3UTR CCA 90 bp | TATAATATTACCCTCCCATTAGCCCACTTGGGAGAAAAGGAAGGGCTGAGAGGAGCACTTCCAGGTCCATaGCAGTCTGTACACGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: YNITLPLAHLGEKEGLRGALPGP*QSVHDD Trigger: ATCATCGTGTACAGACTGCCATGGACCTGGAAGTGC...TCCTCTCAGCCCTTCCTTTTCTCCCAAGTGGGCTAATGGGAGGGTAATATTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS-3UTR CCA 90 bp | GAGAAGGCAGAAAAGGGAGAATCAAGGTACTTGGGGGAGAAAGATGGAACAGACTGCAGGCTGTACATGTaGGGGACTTTTTGGACATTG | + |
|
Preference number: 4 (lower is better) Translates to: EKAEKGESRYLGEKDGTDCRLYM*GTFWTL Trigger: CAATGTCCAAAAAGTCCCCCACATGTACAGCCTGCA...GTCTGTTCCATCTTTCTCCCCCAAGTACCTTGATTCTCCCTTTTCTGCCTTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS-3UTR CCA 90 bp | TATAATATTACCCTCCCATTAGCCCACTTGGGAGAAAAGGAAGGGCTGAGAGGAGCGTTTAACCCGGCATaGATGGATTTCATCAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YNITLPLAHLGEKEGLRGAFNPA*MDFIKS Trigger: GCTCTTGATGAAATCCATCCATGCCGGGTTAAACGC...TCCTCTCAGCCCTTCCTTTTCTCCCAAGTGGGCTAATGGGAGGGTAATATTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS-3UTR TCA 90 bp | GGAAAAGACAGCCCAGGATATATGTGTCTCCAAACAAAAATGTGTTCAGCAGCTGTTGGATGTAGAGTATaGGAGCTGTCAGTCCAACCC | + |
|
Preference number: 4 (lower is better) Translates to: GKDSPGYMCLQTKMCSAAVGCRV*ELSVQP Trigger: GGGTTGGACTGACAGCTCTCATACTCTACATCCAAC...AGCTGCTGAACACATTTTTGTTTGGAGACACATATATCCTGGGCTGTCTTTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS-3UTR GCA 90 bp | GGAAAAGACAGCCCAGGATATATGTGTCTCCAAACAAAAATGTGTTCAGCAGCTTCATCAAGAGCTTGCTaGACTTCCAGGTCCATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GKDSPGYMCLQTKMCSAASSRAC*TSRSMA Trigger: TGCCATGGACCTGGAAGTGCAGCAAGCTCTTGATGA...AGCTGCTGAACACATTTTTGTTTGGAGACACATATATCCTGGGCTGTCTTTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS-3UTR CCA 90 bp | AGCATTTGGGAAGTGAGGACAAGGAGAACCACATGTCCAAGGTCACCCTTAATTACTTTTTGGACATTGTaGTACTCAAACACAGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SIWEVRTRRTTCPRSPLITFWTL*YSNTAT Trigger: GGTGGCTGTGTTTGAGTACCACAATGTCCAAAAAGT...AATTAAGGGTGACCTTGGACATGTGGTTCTCCTTGTCCTCACTTCCCAAATGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| 3UTR CAA 72 bp | AAGATCCTGAGGAACCAATACGGTAGTGATTTCATCTaGAAGGCTGTGAGTATCCTTGTCCAGGTCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KILRNQYGSDFI*KAVSILVQVFL Trigger: CAAGAAGACCTGGACAAGGATACTCACAGCCTTCAAGATGAAATCACTACCGTATTGGTTCCTCAGGATCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS-3UTR CCA 90 bp | ATTCATTTCAATTTCTTGCTAAGACCCGGGAAAGAGAAGGCTTTCATGTTGACGCGGAGCTTATTGCTATaGCGCCTTCCATTCTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: IHFNFLLRPGKEKAFMLTRSLLL*RLPFCI Trigger: AATGCAGAATGGAAGGCGCCATAGCAATAAGCTCCG...CGTCAACATGAAAGCCTTCTCTTTCCCGGGTCTTAGCAAGAAATTGAAATGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| 3UTR CAA 72 bp | TCTGTGTTTTCTGAAGCTGGAGGTCTTTGCCTCCAATaGGTTTTTGATCTATCAATAAAGATGCCAGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SVFSEAGGLCLQ*VFDLSIKMPVA Trigger: GGCCACTGGCATCTTTATTGATAGATCAAAAACCAATTGGAGGCAAAGACCTCCAGCTTCAGAAAACACAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS-3UTR GCA 90 bp | ATTCATTTCAATTTCTTGCTAAGACCCGGGAAAGAGAAGGCTTTCATGTTGACGATTTCATCAAGAGCTTaGTGCACTTCCAGGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: IHFNFLLRPGKEKAFMLTISSRA*CTSRSM Trigger: CATGGACCTGGAAGTGCAGCAAGCTCTTGATGAAAT...CGTCAACATGAAAGCCTTCTCTTTCCCGGGTCTTAGCAAGAAATTGAAATGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS-3UTR GCA 90 bp | ATTCATTTCAATTTCTTGCTAAGACCCGGGAAAGAGAAGGCTTTCATGTTGACGTTCTGCATTCTGCATTaGCTCCATTTAGCTGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: IHFNFLLRPGKEKAFMLTFCILH*LHLAGE Trigger: CTCTCCAGCTAAATGGAGGCAATGCAGAATGCAGAA...CGTCAACATGAAAGCCTTCTCTTTCCCGGGTCTTAGCAAGAAATTGAAATGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| 3UTR CAA 72 bp | ACAATCACTATTTATGTTGATCATGTCCGTTTACATTaGGTAAGTTCACAGGCCTCAGTCAACACAATTACT | + |
|
Preference number: 4 (lower is better) Translates to: TITIYVDHVRLH*VSSQASVNTIT Trigger: AGTAATTGTGTTGACTGAGGCCTGTGAACTTACCAAATGTAAACGGACATGATCAACATAAATAGTGATTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS GCA 90 bp | GCGATGCCCTGGATGAAGACGAAGCCGGTCACCGCGAGCACCGGGTaGCAGTTAAACTCGAGCCCGCTGCCGTTCCAGCCAAGCCCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AMPWMKTKPVTASTG*QLNSSPLPFQPSPS Trigger: AGAGGGGCTTGGCTGGAACGGCAGCGGGCTCGAGTTTAACTGGCACCCGGTGCTCGCGGTGACCGGCTTCGTCTTCATCCAGGGCATCGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS TCA 90 bp | CGCTGCCGTTCCAGCCAAGCCCCTCTCGGAAGTGCAGGACCCAGATaGGCACGAAGATCACCGACAGGAAGCCCACGAGCAGCGCGGACA | + |
|
Preference number: 5 (lower is better) Translates to: RCRSSQAPLGSAGPR*ARRSPTGSPRAART Trigger: TGTCCGCGCTGCTCGTGGGCTTCCTGTCGGTGATCTTCGTGCTCATCTGGGTCCTGCACTTCCGAGAGGGGCTTGGCTGGAACGGCAGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS GCA 90 bp | TTAAACTCGAGCCCGCTGCCGTTCCAGCCAAGCCCCTCTCGGAAGTaGAGGACCCAGATGAGCACGAAGATCACCGACAGGAAGCCCACG | + |
|
Preference number: 5 (lower is better) Translates to: LNSSPLPFQPSPSRK*RTQMSTKITDRKPT Trigger: CGTGGGCTTCCTGTCGGTGATCTTCGTGCTCATCTGGGTCCTGCACTTCCGAGAGGGGCTTGGCTGGAACGGCAGCGGGCTCGAGTTTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS CCA 90 bp | ACGGAGATGATGGCGAGGATGGCAGCCACAGCGTTTAACCCGGCATaGATGGATTTCATCAAGAGCTTGCTGCACTTCCAGGTCCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: TEMMARMAATAFNPA*MDFIKSLLHFQVHG Trigger: GCCATGGACCTGGAAGTGCAGCAAGCTCTTGATGAAATCCATCCATGCCGGGTTAAACGCTGTGGCTGCCATCCTCGCCATCATCTCCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS GCA 90 bp | TCCGAAGAGGAGGAGTCCAGAATACACGTGTATGGGCATGACGATTaGCCGGAGAGAGGGCGGAGCCCATGGAAGCAGAAAGACGAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SEEEESRIHVYGHDD*PERGRSPWKQKDEK Trigger: TTTTTCGTCTTTCTGCTTCCATGGGCTCCGCCCTCTCTCCGGGCAATCGTCATGCCCATACACGTGTATTCTGGACTCCTCCTCTTCGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS CCA 90 bp | CACGTGTATGGGCATGACGATTGCCCGGAGAGAGGGCGGAGCCCATaGAAGCAGAAAGACGAAAAAGCCTACAACAAGCTGTTGGATGTA | + |
|
Preference number: 5 (lower is better) Translates to: HVYGHDDCPERGRSP*KQKDEKAYNKLLDV Trigger: TACATCCAACAGCTTGTTGTAGGCTTTTTCGTCTTTCTGCTTCCATGGGCTCCGCCCTCTCTCCGGGCAATCGTCATGCCCATACACGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS CCA 90 bp | TTTAGCTGGAGAGGGACAGAGCCTGGTTCTCTAGGGCGTTTCCATTaGGGCCTGGTGACAATCCAAAAGATGAGGGCTCCAAACACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: FSWRGTEPGSLGRFH*GLVTIQKMRAPNTR Trigger: TCTGGTGTTTGGAGCCCTCATCTTTTGGATTGTCACCAGGCCCCAATGGAAACGCCCTAGAGAACCAGGCTCTGTCCCTCTCCAGCTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS CCA 90 bp | GGCATGGATGGATTTCATCAAGAGCTTGCTGCACTTCCAGGTCCATaGCAGTCTGTACACGATGATGGCGATGCCCTGGATGAAGACGAA | + |
|
Preference number: 5 (lower is better) Translates to: GMDGFHQELAALPGP*QSVHDDGDALDEDE Trigger: TTCGTCTTCATCCAGGGCATCGCCATCATCGTGTACAGACTGCCATGGACCTGGAAGTGCAGCAAGCTCTTGATGAAATCCATCCATGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS CCA 90 bp | AGTATGAGAGCTGTCAGTCCAACCCAGCTGTGCAGGCTGTACATGTaGGGGACTTTTTGGACATTGTGGTACTCAAACACAGCCACCACG | + |
|
Preference number: 5 (lower is better) Translates to: SMRAVSPTQLCRLYM*GTFWTLWYSNTATT Trigger: CGTGGTGGCTGTGTTTGAGTACCACAATGTCCAAAAAGTCCCCCACATGTACAGCCTGCACAGCTGGGTTGGACTGACAGCTCTCATACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS TCA 90 bp | GCAGAAAGACGAAAAAGCCTACAACAAGCTGTTGGATGTAGAGTATaGGAGCTGTCAGTCCAACCCAGCTGTGCAGGCTGTACATGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: AERRKSLQQAVGCRV*ELSVQPSCAGCTCG Trigger: CCCACATGTACAGCCTGCACAGCTGGGTTGGACTGACAGCTCTCATACTCTACATCCAACAGCTTGTTGTAGGCTTTTTCGTCTTTCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS-3UTR CAA 90 bp | GGCAGCTACATCAATGGCCAGGGTCCTCAAGAGGAAAGAAGAAACAATCACTATGGGACTTTTTGGACATaGTGGTACTCAAACACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GSYINGQGPQEERRNNHYGTFWT*WYSNTA Trigger: GGCTGTGTTTGAGTACCACAATGTCCAAAAAGTCCC...ATAGTGATTGTTTCTTCTTTCCTCTTGAGGACCCTGGCCATTGATGTAGCTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS-3UTR CAA 90 bp | AGACTGCCAGGGTTTGAATGTCAGTTCCATCAATTAAAGAGTTGTGTGATGCTGGATTTCATCAAGAGCTaGCTGCACTTCCAGGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: RLPGFECQFHQLKSCVMLDFIKS*LHFQVH Trigger: ATGGACCTGGAAGTGCAGCAAGCTCTTGATGAAATC...CAGCATCACACAACTCTTTAATTGATGGAACTGACATTCAAACCCTGGCAGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS GCA 72 bp | AGCCCGCTGCCGTTCCAGCCAAGCCCCTCTCGGAAGTaGAGGACCCAGATGAGCACGAAGATCACCGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: SPLPFQPSPSRK*RTQMSTKITDR Trigger: CCTGTCGGTGATCTTCGTGCTCATCTGGGTCCTGCACTTCCGAGAGGGGCTTGGCTGGAACGGCAGCGGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS GCA 72 bp | TGGATGAAGACGAAGCCGGTCACCGCGAGCACCGGGTaGCAGTTAAACTCGAGCCCGCTGCCGTTCCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: WMKTKPVTASTG*QLNSSPLPFQP Trigger: TGGCTGGAACGGCAGCGGGCTCGAGTTTAACTGGCACCCGGTGCTCGCGGTGACCGGCTTCGTCTTCATCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS GCA 72 bp | CAAGGCCGAGGGTTCTCTTCCGGGCTGCTCCCTCACTaGTTGACTCTGCGTCAGCTGGGTCAGCTGCGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: QGRGFSSGLLPH*LTLRQLGQLRP Trigger: TGGACGCAGCTGACCCAGCTGACGCAGAGTCAAGCAGTGAGGGAGCAGCCCGGAAGAGAACCCTCGGCCTTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS TCA 72 bp | GCCGAGGGTTCTCTTCCGGGCTGCTCCCTCACTGCTTaGCTCTGCGTCAGCTGGGTCAGCTGCGTCCATACT | + |
|
Preference number: 6 (lower is better) Translates to: AEGSLPGCSLTA*LCVSWVSCVHT Trigger: AGTATGGACGCAGCTGACCCAGCTGACGCAGAGTCAAGCAGTGAGGGAGCAGCCCGGAAGAGAACCCTCGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS TCA 72 bp | TCCAGCCAAGCCCCTCTCGGAAGTGCAGGACCCAGATaGGCACGAAGATCACCGACAGGAAGCCCACGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSQAPLGSAGPR*ARRSPTGSPRA Trigger: TGCTCGTGGGCTTCCTGTCGGTGATCTTCGTGCTCATCTGGGTCCTGCACTTCCGAGAGGGGCTTGGCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS TCA 72 bp | GGACATTGTGGTACTCAAACACAGCCACCACGGAGATaGTGGCGAGGATGGCAGCCACAGCGTTTAACCCGG | + |
|
Preference number: 6 (lower is better) Translates to: GHCGTQTQPPRR*WRGWQPQRLTR Trigger: CCGGGTTAAACGCTGTGGCTGCCATCCTCGCCATCATCTCCGTGGTGGCTGTGTTTGAGTACCACAATGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS GCA 72 bp | TGGGTCAGCTGCGTCCATACTGTGGGCGGAGCTTATTaGTATGGCGCCTTCCATTCTGCATTCTGCATTGCC | + |
|
Preference number: 6 (lower is better) Translates to: WVSCVHTVGGAY*YGAFHSAFCIA Trigger: GGCAATGCAGAATGCAGAATGGAAGGCGCCATAGCAATAAGCTCCGCCCACAGTATGGACGCAGCTGACCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS CAA 90 bp | GCAGCCACAGCGTTTAACCCGGCATGGATGGATTTCATCAAGAGCTaGCTGCACTTCCAGGTCCATGGCAGTCTGTACACGATGATGGCG | + |
|
Preference number: 6 (lower is better) Translates to: AATAFNPAWMDFIKS*LHFQVHGSLYTMMA Trigger: CGCCATCATCGTGTACAGACTGCCATGGACCTGGAAGTGCAGCAAGCTCTTGATGAAATCCATCCATGCCGGGTTAAACGCTGTGGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS CCA 72 bp | ATGGCGAGGATGGCAGCCACAGCGTTTAACCCGGCATaGATGGATTTCATCAAGAGCTTGCTGCACTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: MARMAATAFNPA*MDFIKSLLHFQ Trigger: CTGGAAGTGCAGCAAGCTCTTGATGAAATCCATCCATGCCGGGTTAAACGCTGTGGCTGCCATCCTCGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS CCA 72 bp | CAGCTGCGTCCATACTGTGGGCGGAGCTTATTGCTATaGCGCCTTCCATTCTGCATTCTGCATTGCCTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: QLRPYCGRSLLL*RLPFCILHCLH Trigger: ATGGAGGCAATGCAGAATGCAGAATGGAAGGCGCCATAGCAATAAGCTCCGCCCACAGTATGGACGCAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS GCA 72 bp | TGTGGGCGGAGCTTATTGCTATGGCGCCTTCCATTCTaGATTCTGCATTGCCTCCATTTAGCTGGAGAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: CGRSLLLWRLPF*ILHCLHLAGEG Trigger: TCCCTCTCCAGCTAAATGGAGGCAATGCAGAATGCAGAATGGAAGGCGCCATAGCAATAAGCTCCGCCCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS CCA 72 bp | GGATTTCATCAAGAGCTTGCTGCACTTCCAGGTCCATaGCAGTCTGTACACGATGATGGCGATGCCCTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: GFHQELAALPGP*QSVHDDGDALD Trigger: ATCCAGGGCATCGCCATCATCGTGTACAGACTGCCATGGACCTGGAAGTGCAGCAAGCTCTTGATGAAATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS CCA 72 bp | TGCAGGCTGTACATGTGGGGGACTTTTTGGACATTGTaGTACTCAAACACAGCCACCACGGAGATGATGGCG | + |
|
Preference number: 6 (lower is better) Translates to: CRLYMWGTFWTL*YSNTATTEMMA Trigger: CGCCATCATCTCCGTGGTGGCTGTGTTTGAGTACCACAATGTCCAAAAAGTCCCCCACATGTACAGCCTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS CCA 72 bp | CCTTCCATTCTGCATTCTGCATTGCCTCCATTTAGCTaGAGAGGGACAGAGCCTGGTTCTCTAGGGCGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: PSILHSALPPFS*RGTEPGSLGRF Trigger: GAAACGCCCTAGAGAACCAGGCTCTGTCCCTCTCCAGCTAAATGGAGGCAATGCAGAATGCAGAATGGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS CAA 72 bp | GCGTTTAACCCGGCATGGATGGATTTCATCAAGAGCTaGCTGCACTTCCAGGTCCATGGCAGTCTGTACACG | + |
|
Preference number: 6 (lower is better) Translates to: AFNPAWMDFIKS*LHFQVHGSLYT Trigger: CGTGTACAGACTGCCATGGACCTGGAAGTGCAGCAAGCTCTTGATGAAATCCATCCATGCCGGGTTAAACGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS GCA 72 bp | CGTTTAACCCGGCATGGATGGATTTCATCAAGAGCTTaGTGCACTTCCAGGTCCATGGCAGTCTGTACACGA | + |
|
Preference number: 6 (lower is better) Translates to: RLTRHGWISSRA*CTSRSMAVCTR Trigger: TCGTGTACAGACTGCCATGGACCTGGAAGTGCAGCAAGCTCTTGATGAAATCCATCCATGCCGGGTTAAACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS CCA 72 bp | GCTGTCAGTCCAACCCAGCTGTGCAGGCTGTACATGTaGGGGACTTTTTGGACATTGTGGTACTCAAACACA | + |
|
Preference number: 6 (lower is better) Translates to: AVSPTQLCRLYM*GTFWTLWYSNT Trigger: TGTGTTTGAGTACCACAATGTCCAAAAAGTCCCCCACATGTACAGCCTGCACAGCTGGGTTGGACTGACAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS CAA 72 bp | CTGTGCAGGCTGTACATGTGGGGGACTTTTTGGACATaGTGGTACTCAAACACAGCCACCACGGAGATGATG | + |
|
Preference number: 6 (lower is better) Translates to: LCRLYMWGTFWT*WYSNTATTEMM Trigger: CATCATCTCCGTGGTGGCTGTGTTTGAGTACCACAATGTCCAAAAAGTCCCCCACATGTACAGCCTGCACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS CAA 72 bp | CTTATTGCTATGGCGCCTTCCATTCTGCATTCTGCATaGCCTCCATTTAGCTGGAGAGGGACAGAGCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: LIAMAPSILHSA*PPFSWRGTEPG Trigger: ACCAGGCTCTGTCCCTCTCCAGCTAAATGGAGGCAATGCAGAATGCAGAATGGAAGGCGCCATAGCAATAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS TCA 72 bp | CGAAAAAGCCTACAACAAGCTGTTGGATGTAGAGTATaGGAGCTGTCAGTCCAACCCAGCTGTGCAGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RKSLQQAVGCRV*ELSVQPSCAGC Trigger: ACAGCCTGCACAGCTGGGTTGGACTGACAGCTCTCATACTCTACATCCAACAGCTTGTTGTAGGCTTTTTCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS GCA 72 bp | TTATTGCTATGGCGCCTTCCATTCTGCATTCTGCATTaGCTCCATTTAGCTGGAGAGGGACAGAGCCTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: LLLWRLPFCILH*LHLAGEGQSLV Trigger: AACCAGGCTCTGTCCCTCTCCAGCTAAATGGAGGCAATGCAGAATGCAGAATGGAAGGCGCCATAGCAATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS TCA 72 bp | GCCCAGCGTATTTGTAAAAACACCTTCTGGTGGGAATaGATGGTACGAGGGGTGTTTCAGGACAAAGAACAG | + |
|
Preference number: 6 (lower is better) Translates to: AQRICKNTFWWE*MVRGVFQDKEQ Trigger: CTGTTCTTTGTCCTGAAACACCCCTCGTACCATTCATTCCCACCAGAAGGTGTTTTTACAAATACGCTGGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
||
| CDS CCA 72 bp | AGCGTATTTGTAAAAACACCTTCTGGTGGGAATGAATaGTACGAGGGGTGTTTCAGGACAAAGAACAGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SVFVKTPSGGNE*YEGCFRTKNSF Trigger: AAAGCTGTTCTTTGTCCTGAAACACCCCTCGTACCATTCATTCCCACCAGAAGGTGTTTTTACAAATACGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028403.3 |
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