Pregenerated sensors for CYBC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039294Ensembl transcript IDs: ENSMUST00000038709.14, ENSMUST00000106115.8, ENSMUST00000137299.8, ENSMUST00000147490.6, ENSMUST00000169393.8
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTGGTCAGGTGTCCAGCATCCAGAGTTGCCTTCAGGGAAGCCCCTaGCCACTGAGAGTGTCCATCTTGAGGGATGGTCAGAGGGAACAG | + |
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Preference number: 1 (lower is better) Translates to: CGQVSSIQSCLQGSP*PLRVSILRDGQREQ Trigger: CTGTTCCCTCTGACCATCCCTCAAGATGGACACTCTCAGTGGTCAGGGGCTTCCCTGAAGGCAACTCTGGATGCTGGACACCTGACCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR CCA 90 bp | AGGAACTGGGTAGTCAGCAGCACTCGGATTCCTCTGAGAGTTCTGTaGTCAGGTGTCCAGCATCCAGAGTTGCCTTCAGGGAAGCCCCTG | + |
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Preference number: 1 (lower is better) Translates to: RNWVVSSTRIPLRVL*SGVQHPELPSGKPL Trigger: CAGGGGCTTCCCTGAAGGCAACTCTGGATGCTGGACACCTGACCACAGAACTCTCAGAGGAATCCGAGTGCTGCTGACTACCCAGTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR GCA 90 bp | TTCTGCTTCAGATTGCCCTTGGGTGAGCTTATCCAGACCAGGCTGTaGTGCCCAACCCAGAGCTGCAGTGTAACTCTGGAGAAGGCACTC | + |
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Preference number: 1 (lower is better) Translates to: FCFRLPLGELIQTRL*CPTQSCSVTLEKAL Trigger: GAGTGCCTTCTCCAGAGTTACACTGCAGCTCTGGGTTGGGCAGCACAGCCTGGTCTGGATAAGCTCACCCAAGGGCAATCTGAAGCAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR CCA 90 bp | CCTTCAGGGAAGCCCCTGACCACTGAGAGTGTCCATCTTGAGGGATaGTCAGAGGGAACAGACATCACTGTGCATAGGAGTGTGTCTGCC | + |
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Preference number: 1 (lower is better) Translates to: PSGKPLTTESVHLEG*SEGTDITVHRSVSA Trigger: GGCAGACACACTCCTATGCACAGTGATGTCTGTTCCCTCTGACCATCCCTCAAGATGGACACTCTCAGTGGTCAGGGGCTTCCCTGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR TCA 90 bp | ATGCTGAAGAGAGCTTGGCATTTTCTGCTTCAGATTGCCCTTGGGTaGGCTTATCCAGACCAGGCTGTGCTGCCCAACCCAGAGCTGCAG | + |
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Preference number: 1 (lower is better) Translates to: MLKRAWHFLLQIALG*AYPDQAVLPNPELQ Trigger: CTGCAGCTCTGGGTTGGGCAGCACAGCCTGGTCTGGATAAGCTCACCCAAGGGCAATCTGAAGCAGAAAATGCCAAGCTCTCTTCAGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR GCA 90 bp | TTAGAAGAGGCCATGGCCCAGGCTGGCCTTGAACGTTCTTCCCGCTaGAGTTCTCAACACTGGGATTTATTGGGCTGTGTCTCCACATGC | + |
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Preference number: 1 (lower is better) Translates to: LEEAMAQAGLERSSR*SSQHWDLLGCVSTC Trigger: GCATGTGGAGACACAGCCCAATAAATCCCAGTGTTGAGAACTGCAGCGGGAAGAACGTTCAAGGCCAGCCTGGGCCATGGCCTCTTCTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR TCA 90 bp | CCCACCAGCAGAAACTCTAATCAGCTTTTTACCACCATAGAGAATTaGATGCTGTCACCCAGGAGTGAGTCTATGACAGCACCTAAGACA | + |
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Preference number: 1 (lower is better) Translates to: PTSRNSNQLFTTIEN*MLSPRSESMTAPKT Trigger: TGTCTTAGGTGCTGTCATAGACTCACTCCTGGGTGACAGCATTCAATTCTCTATGGTGGTAAAAAGCTGATTAGAGTTTCTGCTGGTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR-3UTR GCA 90 bp | GGAGCTGTGTTAGGCCAGAGAGCCACAGCTTCCAGGCCTAGAGGCCAGGCTGGGCCAGGTCTTAAAGGCTaGAGGATGCCAGGAGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: GAVLGQRATASRPRGQAGPGLKG*RMPGEV Trigger: CACCTCTCCTGGCATCCTGCAGCCTTTAAGACCTGG...CCCAGCCTGGCCTCTAGGCCTGGAAGCTGTGGCTCTCTGGCCTAACACAGCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR-3UTR TCA 90 bp | AGGCTTCGAGGAGCTGTGTTAGGCCAGAGAGCCACAGCTTCCAGGCCTAGAGGCCTTCAGGGAAGCCCCTaGCCACTGAGAGTGTCCATC | + |
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Preference number: 2 (lower is better) Translates to: RLRGAVLGQRATASRPRGLQGSP*PLRVSI Trigger: GATGGACACTCTCAGTGGTCAGGGGCTTCCCTGAAG...GCCTCTAGGCCTGGAAGCTGTGGCTCTCTGGCCTAACACAGCTCCTCGAAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGCTGTGTTAGGCCAGAGAGCCACAGCTTCCAGGCCTAGAGGCCAGGCTGGGTACAGTAGCCTGGAGTaGCAAGGTGTCTCCAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: GAVLGQRATASRPRGQAGYSSLE*QGVSKA Trigger: TGCCTTGGAGACACCTTGCCACTCCAGGCTACTGTA...CCCAGCCTGGCCTCTAGGCCTGGAAGCTGTGGCTCTCTGGCCTAACACAGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR-3UTR TCA 90 bp | GGAGCTGTGTTAGGCCAGAGAGCCACAGCTTCCAGGCCTAGAGGCCAGGCTGGGGCACTAGGCCTATGCTaGAGAGAGCTTGGCATTTTC | + |
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Preference number: 2 (lower is better) Translates to: GAVLGQRATASRPRGQAGALGLC*RELGIF Trigger: GAAAATGCCAAGCTCTCTTCAGCATAGGCCTAGTGC...CCCAGCCTGGCCTCTAGGCCTGGAAGCTGTGGCTCTCTGGCCTAACACAGCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCAGGATGCCAGGAGAGGTGATCTTTCCTCTGCTAGCACCTTCTTTCCAGGCGGAGCCACAGGCAGGTaGCCAAGATCTGCCTGTACC | + |
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Preference number: 2 (lower is better) Translates to: LQDARRGDLSSASTFFPGGATGR*PRSACT Trigger: GGTACAGGCAGATCTTGGGCACCTGCCTGTGGCTCC...GCCTGGAAAGAAGGTGCTAGCAGAGGAAAGATCACCTCTCCTGGCATCCTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR-3UTR CCA 90 bp | CCATGGCCCAGGCTGGCCTTGAACGTTCTTCCCGCTGCAGTTCTCAACACTGGGAACCTTTCTGGGTTGTaGCAGAGGTCTAGCCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: PWPRLALNVLPAAVLNTGNLSGL*QRSSPR Trigger: CCTTGGGCTAGACCTCTGCCACAACCCAGAAAGGTT...CCCAGTGTTGAGAACTGCAGCGGGAAGAACGTTCAAGGCCAGCCTGGGCCATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR CAA 90 bp | GGAGAGGTGATCTTTCCTCTGCTAGCACCTTCTTTCCAGGCTGGGTaGGGAGAGCCTTCCATTCCTGACAGCTGGGCTCCAACACTGCTG | + |
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Preference number: 2 (lower is better) Translates to: GEVIFPLLAPSFQAG*GEPSIPDSWAPTLL Trigger: CAGCAGTGTTGGAGCCCAGCTGTCAGGAATGGAAGGCTCTCCCAACCCAGCCTGGAAAGAAGGTGCTAGCAGAGGAAAGATCACCTCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCTTCGAGGAGCTGTGTTAGGCCAGAGAGCCACAGCTTCCAGGCCTAGAGGCGAACAGACATCACTGTaGATAGGAGTGTGTCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: RLRGAVLGQRATASRPRGEQTSL*IGVCLP Trigger: GGGCAGACACACTCCTATGCACAGTGATGTCTGTTC...GCCTCTAGGCCTGGAAGCTGTGGCTCTCTGGCCTAACACAGCTCCTCGAAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGATGCCAGGAGAGGTGATCTTTCCTCTGCTAGCACCTTCTTTCCAGGCTGGTCCATTCCTGACAGCTaGGCTCCAACACTGCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: QDARRGDLSSASTFFPGWSIPDS*APTLLG Trigger: GCCCAGCAGTGTTGGAGCCCAGCTGTCAGGAATGGA...CCAGCCTGGAAAGAAGGTGCTAGCAGAGGAAAGATCACCTCTCCTGGCATCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR CAA 90 bp | CGGATTCCTCTGAGAGTTCTGTGGTCAGGTGTCCAGCATCCAGAGTaGCCTTCAGGGAAGCCCCTGACCACTGAGAGTGTCCATCTTGAG | + |
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Preference number: 2 (lower is better) Translates to: RIPLRVLWSGVQHPE*PSGKPLTTESVHLE Trigger: CTCAAGATGGACACTCTCAGTGGTCAGGGGCTTCCCTGAAGGCAACTCTGGATGCTGGACACCTGACCACAGAACTCTCAGAGGAATCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGCCATGGCCCAGGCTGGCCTTGAACGTTCTTCCCGCTGCAGTTCTCAACACCAAGTCGGTTGGAGATaGATCAGAAGTGGATGGCAT | + |
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Preference number: 2 (lower is better) Translates to: EAMAQAGLERSSRCSSQHQVGWR*IRSGWH Trigger: ATGCCATCCACTTCTGATGCATCTCCAACCGACTTG...GTGTTGAGAACTGCAGCGGGAAGAACGTTCAAGGCCAGCCTGGGCCATGGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGCCATGGCCCAGGCTGGCCTTGAACGTTCTTCCCGCTGCAGTTCTCAACACGGCTGTGTCTCCACATaGCTGTTTTCTTCAGGTCTT | + |
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Preference number: 2 (lower is better) Translates to: EAMAQAGLERSSRCSSQHGCVST*LFSSGL Trigger: AAGACCTGAAGAAAACAGGCATGTGGAGACACAGCC...GTGTTGAGAACTGCAGCGGGAAGAACGTTCAAGGCCAGCCTGGGCCATGGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGCTGTGTTAGGCCAGAGAGCCACAGCTTCCAGGCCTAGAGGCCAGGCTGGGAATTGTCAAGTCGGTTaGAGATGCATCAGAAGTGGA | + |
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Preference number: 2 (lower is better) Translates to: GAVLGQRATASRPRGQAGNCQVG*RCIRSG Trigger: TCCACTTCTGATGCATCTCCAACCGACTTGACAATT...CCCAGCCTGGCCTCTAGGCCTGGAAGCTGTGGCTCTCTGGCCTAACACAGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR-3UTR GCA 90 bp | ACTAGGCCTATGCTGAAGAGAGCTTGGCATTTTCTGCTTCAGATTGCCCTTGGGATCCAGACCAGGCTGTaGTGCCCAACCCAGAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: TRPMLKRAWHFLLQIALGIQTRL*CPTQSC Trigger: GCAGCTCTGGGTTGGGCAGCACAGCCTGGTCTGGAT...CCCAAGGGCAATCTGAAGCAGAAAATGCCAAGCTCTCTTCAGCATAGGCCTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCAGGATGCCAGGAGAGGTGATCTTTCCTCTGCTAGCACCTTCTTTCCAGGCCCTCTGAGAGTTCTGTaGTCAGGTGTCCAGCATCCA | + |
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Preference number: 2 (lower is better) Translates to: LQDARRGDLSSASTFFPGPLRVL*SGVQHP Trigger: TGGATGCTGGACACCTGACCACAGAACTCTCAGAGG...GCCTGGAAAGAAGGTGCTAGCAGAGGAAAGATCACCTCTCCTGGCATCCTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR-3UTR CCA 90 bp | GCCACAGCTTCCAGGCCTAGAGGCCAGGCTGGGAACTTAGTAAACAATGTACTTTCCATTCCTGACAGCTaGGCTCCAACACTGCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: ATASRPRGQAGNLVNNVLSIPDS*APTLLG Trigger: GCCCAGCAGTGTTGGAGCCCAGCTGTCAGGAATGGA...AAGTACATTGTTTACTAAGTTCCCAGCCTGGCCTCTAGGCCTGGAAGCTGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCAGGATGCCAGGAGAGGTGATCTTTCCTCTGCTAGCACCTTCTTTCCAGGCGTAGCATCCACACCCTaGATCCTGATAGATGCAACC | + |
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Preference number: 2 (lower is better) Translates to: LQDARRGDLSSASTFFPGVASTP*ILIDAT Trigger: GGTTGCATCTATCAGGATGCAGGGTGTGGATGCTAC...GCCTGGAAAGAAGGTGCTAGCAGAGGAAAGATCACCTCTCCTGGCATCCTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCTTCGAGGAGCTGTGTTAGGCCAGAGAGCCACAGCTTCCAGGCCTAGAGGCAATTGTCAAGTCGGTTaGAGATGCATCAGAAGTGGA | + |
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Preference number: 2 (lower is better) Translates to: RLRGAVLGQRATASRPRGNCQVG*RCIRSG Trigger: TCCACTTCTGATGCATCTCCAACCGACTTGACAATT...GCCTCTAGGCCTGGAAGCTGTGGCTCTCTGGCCTAACACAGCTCCTCGAAGCCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR-3UTR CCA 90 bp | GGGCTCTCAGACACATGGTCTAAGAAGGAACTGGGTAGTCAGCAGCACTCGGATTACAGTAGCCTGGAGTaGCAAGGTGTCTCCAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: GLSDTWSKKELGSQQHSDYSSLE*QGVSKA Trigger: TGCCTTGGAGACACCTTGCCACTCCAGGCTACTGTA...ATCCGAGTGCTGCTGACTACCCAGTTCCTTCTTAGACCATGTGTCTGAGAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR-3UTR CCA 90 bp | AGTCAGCAGCACTCGGATTCCTCTGAGAGTTCTGTGGTCAGGTGTCCAGCATCCGTCCATCTTGAGGGATaGTCAGAGGGAACAGACATC | + |
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Preference number: 2 (lower is better) Translates to: SQQHSDSSESSVVRCPASVHLEG*SEGTDI Trigger: GATGTCTGTTCCCTCTGACCATCCCTCAAGATGGAC...GGATGCTGGACACCTGACCACAGAACTCTCAGAGGAATCCGAGTGCTGCTGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR-3UTR GCA 90 bp | GGGATTTATTGGGCTGTGTCTCCACATGCCTGTTTTCTTCAGGTCTTTTCAAGGGGAGCCACAGGCAGGTaGCCAAGATCTGCCTGTACC | + |
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Preference number: 2 (lower is better) Translates to: GIYWAVSPHACFLQVFSRGATGR*PRSACT Trigger: GGTACAGGCAGATCTTGGGCACCTGCCTGTGGCTCC...CCTTGAAAAGACCTGAAGAAAACAGGCATGTGGAGACACAGCCCAATAAATCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR-3UTR TCA 90 bp | GGGATTTATTGGGCTGTGTCTCCACATGCCTGTTTTCTTCAGGTCTTTTCAAGGCTTCAGGGAAGCCCCTaGCCACTGAGAGTGTCCATC | + |
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Preference number: 2 (lower is better) Translates to: GIYWAVSPHACFLQVFSRLQGSP*PLRVSI Trigger: GATGGACACTCTCAGTGGTCAGGGGCTTCCCTGAAG...CCTTGAAAAGACCTGAAGAAAACAGGCATGTGGAGACACAGCCCAATAAATCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCCAGGCTGGGAACTTAGTAAACAATGTACTTTTGAGCAACTTGAGTCCACCGCTGGGCTCCAACACTaGTGGGCTCTCAGACACATG | + |
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Preference number: 2 (lower is better) Translates to: RPGWELSKQCTFEQLESTAGLQH*WALRHM Trigger: CATGTGTCTGAGAGCCCAGCAGTGTTGGAGCCCAGC...GGTGGACTCAAGTTGCTCAAAAGTACATTGTTTACTAAGTTCCCAGCCTGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR-3UTR CCA 90 bp | TTGAGGGATGGTCAGAGGGAACAGACATCACTGTGCATAGGAGTGTGTCTGCCCGAGATGCATCAGAAGTaGATGGCATTTACCTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: LRDGQREQTSLCIGVCLPEMHQK*MAFTCS Trigger: GCTGCAGGTAAATGCCATCCACTTCTGATGCATCTC...GGGCAGACACACTCCTATGCACAGTGATGTCTGTTCCCTCTGACCATCCCTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR-3UTR CCA 90 bp | GGGCTCTCAGACACATGGTCTAAGAAGGAACTGGGTAGTCAGCAGCACTCGGATGAGATGCATCAGAAGTaGATGGCATTTACCTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: GLSDTWSKKELGSQQHSDEMHQK*MAFTCS Trigger: GCTGCAGGTAAATGCCATCCACTTCTGATGCATCTC...ATCCGAGTGCTGCTGACTACCCAGTTCCTTCTTAGACCATGTGTCTGAGAGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGACCATATTCCCCAAGTCAGAACTAGTGGCAGTCACTTCAGAAGACCTGTTAACCTTTCTGGGTTGTaGCAGAGGTCTAGCCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: RDHIPQVRTSGSHFRRPVNLSGL*QRSSPR Trigger: CCTTGGGCTAGACCTCTGCCACAACCCAGAAAGGTT...AACAGGTCTTCTGAAGTGACTGCCACTAGTTCTGACTTGGGGAATATGGTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGACCATATTCCCCAAGTCAGAACTAGTGGCAGTCACTTCAGAAGACCTGTTCCTCTGAGAGTTCTGTaGTCAGGTGTCCAGCATCCA | + |
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Preference number: 2 (lower is better) Translates to: RDHIPQVRTSGSHFRRPVPLRVL*SGVQHP Trigger: TGGATGCTGGACACCTGACCACAGAACTCTCAGAGG...AACAGGTCTTCTGAAGTGACTGCCACTAGTTCTGACTTGGGGAATATGGTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCCAGGCTGGGAACTTAGTAAACAATGTACTTTTGAGCAACTTGAGTCCACCCAAGCAAAAGGCAGGTaGCCCATAGTAGAACTGCCC | + |
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Preference number: 2 (lower is better) Translates to: RPGWELSKQCTFEQLESTQAKGR*PIVELP Trigger: GGGCAGTTCTACTATGGGCCACCTGCCTTTTGCTTG...GGTGGACTCAAGTTGCTCAAAAGTACATTGTTTACTAAGTTCCCAGCCTGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR-3UTR GCA 90 bp | TGTGTCTCCACATGCCTGTTTTCTTCAGGTCTTTTCAAGGCTCGAAAGGCTAAGCAAGTCGGTTGGAGATaGATCAGAAGTGGATGGCAT | + |
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Preference number: 2 (lower is better) Translates to: CVSTCLFSSGLFKARKAKQVGWR*IRSGWH Trigger: ATGCCATCCACTTCTGATGCATCTCCAACCGACTTG...CTTAGCCTTTCGAGCCTTGAAAAGACCTGAAGAAAACAGGCATGTGGAGACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR-3UTR CCA 90 bp | GCCACAGCTTCCAGGCCTAGAGGCCAGGCTGGGAACTTAGTAAACAATGTACTTATGCTGAAGAGAGCTTaGCATTTTCTGCTTCAGATT | + |
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Preference number: 2 (lower is better) Translates to: ATASRPRGQAGNLVNNVLMLKRA*HFLLQI Trigger: AATCTGAAGCAGAAAATGCCAAGCTCTCTTCAGCAT...AAGTACATTGTTTACTAAGTTCCCAGCCTGGCCTCTAGGCCTGGAAGCTGTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR CAA 90 bp | AGAGGCCAGGCTGGGAACTTAGTAAACAATGTACTTTTGAGCAACTaGAGTCCACCCAGAAGGAGACTAGAAGAGCAGAAAAGGACCATT | + |
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Preference number: 2 (lower is better) Translates to: RGQAGNLVNNVLLSN*SPPRRRLEEQKRTI Trigger: AATGGTCCTTTTCTGCTCTTCTAGTCTCCTTCTGGGTGGACTCAAGTTGCTCAAAAGTACATTGTTTACTAAGTTCCCAGCCTGGCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR-3UTR GCA 90 bp | TGGGGAGAGAAATCTCTAACTTATCCACTTAAAAAGCTCACTTTGGCATGTTTAGCTGGGCTCCAACACTaGTGGGCTCTCAGACACATG | + |
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Preference number: 2 (lower is better) Translates to: WGEKSLTYPLKKLTLACLAGLQH*WALRHM Trigger: CATGTGTCTGAGAGCCCAGCAGTGTTGGAGCCCAGC...TAAACATGCCAAAGTGAGCTTTTTAAGTGGATAAGTTAGAGATTTCTCTCCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTTTTCTTCAGGTCTTTTCAAGGCTCGAAAGGCTAAGACTGTTTCTGTAAGGGTCCATCTTGAGGGATaGTCAGAGGGAACAGACATC | + |
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Preference number: 2 (lower is better) Translates to: LFSSGLFKARKAKTVSVRVHLEG*SEGTDI Trigger: GATGTCTGTTCCCTCTGACCATCCCTCAAGATGGAC...CCTTACAGAAACAGTCTTAGCCTTTCGAGCCTTGAAAAGACCTGAAGAAAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTTTTCTTCAGGTCTTTTCAAGGCTCGAAAGGCTAAGACTGTTTCTGTAAGGGGGCTCTCAGACACATaGTCTAAGAAGGAACTGGGT | + |
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Preference number: 2 (lower is better) Translates to: LFSSGLFKARKAKTVSVRGLSDT*SKKELG Trigger: ACCCAGTTCCTTCTTAGACCATGTGTCTGAGAGCCC...CCTTACAGAAACAGTCTTAGCCTTTCGAGCCTTGAAAAGACCTGAAGAAAACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGGAGAGAAATCTCTAACTTATCCACTTAAAAAGCTCACTTTGGCATGTTTAGGTCTAAGAAGGAACTaGGTAGTCAGCAGCACTCGG | + |
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Preference number: 2 (lower is better) Translates to: WGEKSLTYPLKKLTLACLGLRRN*VVSSTR Trigger: CCGAGTGCTGCTGACTACCCAGTTCCTTCTTAGACC...TAAACATGCCAAAGTGAGCTTTTTAAGTGGATAAGTTAGAGATTTCTCTCCCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGGAGAGAAATCTCTAACTTATCCACTTAAAAAGCTCACTTTGGCATGTTTAAACACTGGGATTTATTaGGCTGTGTCTCCACATGCC | + |
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Preference number: 2 (lower is better) Translates to: WGEKSLTYPLKKLTLACLNTGIY*AVSPHA Trigger: GGCATGTGGAGACACAGCCCAATAAATCCCAGTGTT...TAAACATGCCAAAGTGAGCTTTTTAAGTGGATAAGTTAGAGATTTCTCTCCCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR-3UTR CAA 90 bp | GGAGCTGTGTTAGGCCAGAGAGCCACAGCTTCCAGGCCTAGAGGCCAGGCTGGGCTGAGAGTGTCCATCTaGAGGGATGGTCAGAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: GAVLGQRATASRPRGQAGLRVSI*RDGQRE Trigger: TTCCCTCTGACCATCCCTCAAGATGGACACTCTCAG...CCCAGCCTGGCCTCTAGGCCTGGAAGCTGTGGCTCTCTGGCCTAACACAGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| 3UTR CCA 72 bp | CAGGCTGGGTTGGGAGAGCCTTCCATTCCTGACAGCTaGGCTCCAACACTGCTGGGCTCTCAGACACATGGT | + |
|
Preference number: 3 (lower is better) Translates to: QAGLGEPSIPDS*APTLLGSQTHG Trigger: ACCATGTGTCTGAGAGCCCAGCAGTGTTGGAGCCCAGCTGTCAGGAATGGAAGGCTCTCCCAACCCAGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGCTTCGAGGAGCTGTGTTAGGCCAGAGAGCCACAGCTTCCAGGCCTAGAGGCTGCAACCTTTCTGGGTaGTGGCAGAGGTCTAGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: RLRGAVLGQRATASRPRGCNLSG*WQRSSP Trigger: TGGGCTAGACCTCTGCCACAACCCAGAAAGGTTGCA...GCCTCTAGGCCTGGAAGCTGTGGCTCTCTGGCCTAACACAGCTCCTCGAAGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| 3UTR-3UTR CAA 90 bp | CCATGGCCCAGGCTGGCCTTGAACGTTCTTCCCGCTGCAGTTCTCAACACTGGGTCTTTCCAGGCTGGGTaGGGAGAGCCTTCCATTCCT | + |
|
Preference number: 3 (lower is better) Translates to: PWPRLALNVLPAAVLNTGSFQAG*GEPSIP Trigger: AGGAATGGAAGGCTCTCCCAACCCAGCCTGGAAAGA...CCCAGTGTTGAGAACTGCAGCGGGAAGAACGTTCAAGGCCAGCCTGGGCCATGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGCTTCGAGGAGCTGTGTTAGGCCAGAGAGCCACAGCTTCCAGGCCTAGAGGCCTGAGAGTGTCCATCTaGAGGGATGGTCAGAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: RLRGAVLGQRATASRPRGLRVSI*RDGQRE Trigger: TTCCCTCTGACCATCCCTCAAGATGGACACTCTCAG...GCCTCTAGGCCTGGAAGCTGTGGCTCTCTGGCCTAACACAGCTCCTCGAAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| 3UTR TCA 72 bp | GTGTCCAGCATCCAGAGTTGCCTTCAGGGAAGCCCCTaGCCACTGAGAGTGTCCATCTTGAGGGATGGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: VSSIQSCLQGSP*PLRVSILRDGQ Trigger: CTGACCATCCCTCAAGATGGACACTCTCAGTGGTCAGGGGCTTCCCTGAAGGCAACTCTGGATGCTGGACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| 3UTR GCA 72 bp | AGATTGCCCTTGGGTGAGCTTATCCAGACCAGGCTGTaGTGCCCAACCCAGAGCTGCAGTGTAACTCTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: RLPLGELIQTRL*CPTQSCSVTLE Trigger: CTCCAGAGTTACACTGCAGCTCTGGGTTGGGCAGCACAGCCTGGTCTGGATAAGCTCACCCAAGGGCAATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| 3UTR GCA 72 bp | GCCATGGCCCAGGCTGGCCTTGAACGTTCTTCCCGCTaGAGTTCTCAACACTGGGATTTATTGGGCTGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: AMAQAGLERSSR*SSQHWDLLGCV Trigger: GACACAGCCCAATAAATCCCAGTGTTGAGAACTGCAGCGGGAAGAACGTTCAAGGCCAGCCTGGGCCATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTTGGGAGAGCCTTCCATTCCTGACAGCTGGGCTCCAACACTGCTGGGCTCTCCAATTGTCAAGTCGGTaGGAGATGCATCAGAAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: GWESLPFLTAGLQHCWALQLSSR*EMHQKW Trigger: CCACTTCTGATGCATCTCCAACCGACTTGACAATTG...GAGAGCCCAGCAGTGTTGGAGCCCAGCTGTCAGGAATGGAAGGCTCTCCCAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| 3UTR CCA 72 bp | GTAGTCAGCAGCACTCGGATTCCTCTGAGAGTTCTGTaGTCAGGTGTCCAGCATCCAGAGTTGCCTTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: VVSSTRIPLRVL*SGVQHPELPSG Trigger: CCCTGAAGGCAACTCTGGATGCTGGACACCTGACCACAGAACTCTCAGAGGAATCCGAGTGCTGCTGACTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGAGGGATGGTCAGAGGGAACAGACATCACTGTGCATAGGAGTGTGTCTGCCCTGCAACCTTTCTGGGTaGTGGCAGAGGTCTAGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LRDGQREQTSLCIGVCLPCNLSG*WQRSSP Trigger: TGGGCTAGACCTCTGCCACAACCCAGAAAGGTTGCA...GGGCAGACACACTCCTATGCACAGTGATGTCTGTTCCCTCTGACCATCCCTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| 3UTR TCA 72 bp | AGAGCTTGGCATTTTCTGCTTCAGATTGCCCTTGGGTaGGCTTATCCAGACCAGGCTGTGCTGCCCAACCCA | + |
|
Preference number: 3 (lower is better) Translates to: RAWHFLLQIALG*AYPDQAVLPNP Trigger: TGGGTTGGGCAGCACAGCCTGGTCTGGATAAGCTCACCCAAGGGCAATCTGAAGCAGAAAATGCCAAGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| 3UTR GCA 72 bp | GCCCATAGTAGAACTGCCCAAGGAGCCACAGGCAGGTaGCCAAGATCTGCCTGTACCCTTACAATTGTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: AHSRTAQGATGR*PRSACTLTIVK Trigger: CTTGACAATTGTAAGGGTACAGGCAGATCTTGGGCACCTGCCTGTGGCTCCTTGGGCAGTTCTACTATGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| 3UTR GCA 72 bp | CTTATCCAGACCAGGCTGTGCTGCCCAACCCAGAGCTaGAGTGTAACTCTGGAGAAGGCACTCATTTCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: LIQTRLCCPTQS*SVTLEKALISE Trigger: CTCAGAAATGAGTGCCTTCTCCAGAGTTACACTGCAGCTCTGGGTTGGGCAGCACAGCCTGGTCTGGATAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGGCCATGGCCCAGGCTGGCCTTGAACGTTCTTCCCGCTGCAGTTCTCAACACTATGCTGAAGAGAGCTaGGCATTTTCTGCTTCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: EAMAQAGLERSSRCSSQHYAEES*AFSASD Trigger: ATCTGAAGCAGAAAATGCCAAGCTCTCTTCAGCATA...GTGTTGAGAACTGCAGCGGGAAGAACGTTCAAGGCCAGCCTGGGCCATGGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| 3UTR GCA 72 bp | CCTAGATGTAGCATCCACACCCTGCATCCTGATAGATaGAACCTTTCTGGGTTGTGGCAGAGGTCTAGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: PRCSIHTLHPDR*NLSGLWQRSSP Trigger: TGGGCTAGACCTCTGCCACAACCCAGAAAGGTTGCATCTATCAGGATGCAGGGTGTGGATGCTACATCTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| 3UTR CCA 72 bp | GAAGAGAGCTTGGCATTTTCTGCTTCAGATTGCCCTTaGGTGAGCTTATCCAGACCAGGCTGTGCTGCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: EESLAFSASDCP*VSLSRPGCAAQ Trigger: TTGGGCAGCACAGCCTGGTCTGGATAAGCTCACCCAAGGGCAATCTGAAGCAGAAAATGCCAAGCTCTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| 3UTR CCA 72 bp | AAGCCCCTGACCACTGAGAGTGTCCATCTTGAGGGATaGTCAGAGGGAACAGACATCACTGTGCATAGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: KPLTTESVHLEG*SEGTDITVHRS Trigger: ACTCCTATGCACAGTGATGTCTGTTCCCTCTGACCATCCCTCAAGATGGACACTCTCAGTGGTCAGGGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTGTCTCCACATGCCTGTTTTCTTCAGGTCTTTTCAAGGCTCGAAAGGCTAAGGTCCAGCATCCAGAGTaGCCTTCAGGGAAGCCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: CVSTCLFSSGLFKARKAKVQHPE*PSGKPL Trigger: CAGGGGCTTCCCTGAAGGCAACTCTGGATGCTGGAC...CTTAGCCTTTCGAGCCTTGAAAAGACCTGAAGAAAACAGGCATGTGGAGACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGATAGATGCAACCTTTCTGGGTTGTGGCAGAGGTCTAGCCCAAGGTTCTGCACAATTGTCAAGTCGGTaGGAGATGCATCAGAAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LIDATFLGCGRGLAQGSAQLSSR*EMHQKW Trigger: CCACTTCTGATGCATCTCCAACCGACTTGACAATTG...TGCAGAACCTTGGGCTAGACCTCTGCCACAACCCAGAAAGGTTGCATCTATCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGATTTATTGGGCTGTGTCTCCACATGCCTGTTTTCTTCAGGTCTTTTCAAGGTCTTTCCAGGCTGGGTaGGGAGAGCCTTCCATTCCT | + |
|
Preference number: 3 (lower is better) Translates to: GIYWAVSPHACFLQVFSRSFQAG*GEPSIP Trigger: AGGAATGGAAGGCTCTCCCAACCCAGCCTGGAAAGA...CCTTGAAAAGACCTGAAGAAAACAGGCATGTGGAGACACAGCCCAATAAATCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| 3UTR CCA 72 bp | GTTCTTCCCGCTGCAGTTCTCAACACTGGGATTTATTaGGCTGTGTCTCCACATGCCTGTTTTCTTCAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: VLPAAVLNTGIY*AVSPHACFLQV Trigger: GACCTGAAGAAAACAGGCATGTGGAGACACAGCCCAATAAATCCCAGTGTTGAGAACTGCAGCGGGAAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| 3UTR GCA 72 bp | AAGGCCTTTGTCTATGTAACTTCAATTCCCCAGTTCTaGCTGATGAGGTATGCGTATGAGGCTTCGAGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: KAFVYVTSIPQF*LMRYAYEASRS Trigger: GCTCCTCGAAGCCTCATACGCATACCTCATCAGGCAGAACTGGGGAATTGAAGTTACATAGACAAAGGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGGGAGAGAAATCTCTAACTTATCCACTTAAAAAGCTCACTTTGGCATGTTTATGGCCCAGGCTGGCCTaGAACGTTCTTCCCGCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: WGEKSLTYPLKKLTLACLWPRLA*NVLPAA Trigger: TGCAGCGGGAAGAACGTTCAAGGCCAGCCTGGGCCA...TAAACATGCCAAAGTGAGCTTTTTAAGTGGATAAGTTAGAGATTTCTCTCCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| 3UTR CCA 72 bp | AGGAGACTAGAAGAGCAGAAAAGGACCATTAGTGGTTaGTACCAACTTTTCTTAGAAGAGGCCATGGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: RRLEEQKRTISG*YQLFLEEAMAQ Trigger: CTGGGCCATGGCCTCTTCTAAGAAAAGTTGGTACCAACCACTAATGGTCCTTTTCTGCTCTTCTAGTCTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGCCAGGCTGGGAACTTAGTAAACAATGTACTTTTGAGCAACTTGAGTCCACCATTTTCTGCTTCAGATaGCCCTTGGGTGAGCTTATC | + |
|
Preference number: 3 (lower is better) Translates to: RPGWELSKQCTFEQLESTIFCFR*PLGELI Trigger: GATAAGCTCACCCAAGGGCAATCTGAAGCAGAAAAT...GGTGGACTCAAGTTGCTCAAAAGTACATTGTTTACTAAGTTCCCAGCCTGGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGATTTATTGGGCTGTGTCTCCACATGCCTGTTTTCTTCAGGTCTTTTCAAGGTATGCTGAAGAGAGCTaGGCATTTTCTGCTTCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: GIYWAVSPHACFLQVFSRYAEES*AFSASD Trigger: ATCTGAAGCAGAAAATGCCAAGCTCTCTTCAGCATA...CCTTGAAAAGACCTGAAGAAAACAGGCATGTGGAGACACAGCCCAATAAATCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| 3UTR TCA 72 bp | AGAAACTCTAATCAGCTTTTTACCACCATAGAGAATTaGATGCTGTCACCCAGGAGTGAGTCTATGACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: RNSNQLFTTIEN*MLSPRSESMTA Trigger: TGCTGTCATAGACTCACTCCTGGGTGACAGCATTCAATTCTCTATGGTGGTAAAAAGCTGATTAGAGTTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| 3UTR CCA 72 bp | AGCCAAAACCCAACAAGCTATACTTCACGTTTCATCTaGGGAGAGAAATCTCTAACTTATCCACTTAAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SQNPTSYTSRFI*GEKSLTYPLKK Trigger: CTTTTTAAGTGGATAAGTTAGAGATTTCTCTCCCCAGATGAAACGTGAAGTATAGCTTGTTGGGTTTTGGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| CDS-3UTR GCA 90 bp | GGAGCTGTGTTAGGCCAGAGAGCCACAGCTTCCAGGCCTAGAGGCCAGGCTGGGGGAGGCGGGTGCTGGTaGGTGTCTCCACCTGCATAT | + |
|
Preference number: 4 (lower is better) Translates to: GAVLGQRATASRPRGQAGGGGCW*VSPPAY Trigger: ATATGCAGGTGGAGACACGCACCAGCACCCGCCTCC...CCCAGCCTGGCCTCTAGGCCTGGAAGCTGTGGCTCTCTGGCCTAACACAGCTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTTCGAGGAGCTGTGTTAGGCCAGAGAGCCACAGCTTCCAGGCCTAGAGGCGATGGAGGCGGGTGCTaGTGCGTGTCTCCACCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RLRGAVLGQRATASRPRGDGGGC*CVSPPA Trigger: TGCAGGTGGAGACACGCACCAGCACCCGCCTCCATC...GCCTCTAGGCCTGGAAGCTGTGGCTCTCTGGCCTAACACAGCTCCTCGAAGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTTCGAGGAGCTGTGTTAGGCCAGAGAGCCACAGCTTCCAGGCCTAGAGGCGGAGCCCTCTTCAGATaGAGGCGGGTGCTGGTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: RLRGAVLGQRATASRPRGGALFR*RRVLVR Trigger: ACGCACCAGCACCCGCCTCCATCTGAAGAGGGCTCC...GCCTCTAGGCCTGGAAGCTGTGGCTCTCTGGCCTAACACAGCTCCTCGAAGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTTCGAGGAGCTGTGTTAGGCCAGAGAGCCACAGCTTCCAGGCCTAGAGGCTCAGATGGAGGCGGGTaGTGGTGCGTGTCTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: RLRGAVLGQRATASRPRGSDGGG*WCVSPP Trigger: AGGTGGAGACACGCACCAGCACCCGCCTCCATCTGA...GCCTCTAGGCCTGGAAGCTGTGGCTCTCTGGCCTAACACAGCTCCTCGAAGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| CDS-3UTR TCA 90 bp | AGGCTTCGAGGAGCTGTGTTAGGCCAGAGAGCCACAGCTTCCAGGCCTAGAGGCCCCATGACTGCACTCTaGGTGAGAGGGTGGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RLRGAVLGQRATASRPRGPMTAL*VRGWEK Trigger: CTTCTCCCACCCTCTCACTCAGAGTGCAGTCATGGG...GCCTCTAGGCCTGGAAGCTGTGGCTCTCTGGCCTAACACAGCTCCTCGAAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| CDS-3UTR TCA 90 bp | GGAGCTGTGTTAGGCCAGAGAGCCACAGCTTCCAGGCCTAGAGGCCAGGCTGGGTCCCAGTGTTCTTGTTaGAAATGGCCTCCTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GAVLGQRATASRPRGQAGSQCSC*KWPPPS Trigger: ACTGGGAGGAGGCCATTTTCAACAAGAACACTGGGA...CCCAGCCTGGCCTCTAGGCCTGGAAGCTGTGGCTCTCTGGCCTAACACAGCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| CDS-3UTR TCA 90 bp | CAGGATGCCAGGAGAGGTGATCTTTCCTCTGCTAGCACCTTCTTTCCAGGCTGGGATCGTGGCCCGCTCTaGGAAGAGTCAGCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QDARRGDLSSASTFFPGWDRGPL*EESAAS Trigger: AGAAGCTGCTGACTCTTCTCAGAGCGGGCCACGATC...CCAGCCTGGAAAGAAGGTGCTAGCAGAGGAAAGATCACCTCTCCTGGCATCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| CDS-3UTR GCA 90 bp | GGGCTCTCAGACACATGGTCTAAGAAGGAACTGGGTAGTCAGCAGCACTCGGATGGGACCAAGACCGGATaGCTGGAGCCCTCTTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GLSDTWSKKELGSQQHSDGTKTG*LEPSSD Trigger: ATCTGAAGAGGGCTCCAGGCATCCGGTCTTGGTCCC...ATCCGAGTGCTGCTGACTACCCAGTTCCTTCTTAGACCATGTGTCTGAGAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| CDS-3UTR GCA 90 bp | GCCACAGCTTCCAGGCCTAGAGGCCAGGCTGGGAACTTAGTAAACAATGTACTTGCGTCGGCCCATGACTaGACTCTGAGTGAGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ATASRPRGQAGNLVNNVLASAHD*TLSERV Trigger: CACCCTCTCACTCAGAGTGCAGTCATGGGCCGACGC...AAGTACATTGTTTACTAAGTTCCCAGCCTGGCCTCTAGGCCTGGAAGCTGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| CDS-3UTR CCA 90 bp | ACAAGCAAAAGGCAGGTGGCCCATAGTAGAACTGCCCAAGGAGCCACAGGCAGGCAGCAGCCAGGCCAGTaGATAATATTCCGACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TSKRQVAHSRTAQGATGRQQPGQ*IIFRPA Trigger: TGCTGGTCGGAATATTATCCACTGGCCTGGCTGCTG...CCTGCCTGTGGCTCCTTGGGCAGTTCTACTATGGGCCACCTGCCTTTTGCTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| 3UTR CAA 72 bp | ATCTTTCCTCTGCTAGCACCTTCTTTCCAGGCTGGGTaGGGAGAGCCTTCCATTCCTGACAGCTGGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IFPLLAPSFQAG*GEPSIPDSWAP Trigger: TGGAGCCCAGCTGTCAGGAATGGAAGGCTCTCCCAACCCAGCCTGGAAAGAAGGTGCTAGCAGAGGAAAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| CDS-3UTR GCA 90 bp | ACTAGGCCTATGCTGAAGAGAGCTTGGCATTTTCTGCTTCAGATTGCCCTTGGGTCAGATGGAGGCGGGTaGTGGTGCGTGTCTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: TRPMLKRAWHFLLQIALGSDGGG*WCVSPP Trigger: AGGTGGAGACACGCACCAGCACCCGCCTCCATCTGA...CCCAAGGGCAATCTGAAGCAGAAAATGCCAAGCTCTCTTCAGCATAGGCCTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| CDS-3UTR GCA 90 bp | AGGGACCATATTCCCCAAGTCAGAACTAGTGGCAGTCACTTCAGAAGACCTGTTGGAGGCGGGTGCTGGTaGGTGTCTCCACCTGCATAT | + |
|
Preference number: 4 (lower is better) Translates to: RDHIPQVRTSGSHFRRPVGGGCW*VSPPAY Trigger: ATATGCAGGTGGAGACACGCACCAGCACCCGCCTCC...AACAGGTCTTCTGAAGTGACTGCCACTAGTTCTGACTTGGGGAATATGGTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCAGGCTGGGAACTTAGTAAACAATGTACTTTTGAGCAACTTGAGTCCACCGGAGCCCTCTTCAGATaGAGGCGGGTGCTGGTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: RPGWELSKQCTFEQLESTGALFR*RRVLVR Trigger: ACGCACCAGCACCCGCCTCCATCTGAAGAGGGCTCC...GGTGGACTCAAGTTGCTCAAAAGTACATTGTTTACTAAGTTCCCAGCCTGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| CDS-3UTR CCA 90 bp | GGTTGGGAGAGCCTTCCATTCCTGACAGCTGGGCTCCAACACTGCTGGGCTCTCTCCACATTCACATCCTaGATGTCTTTCAACAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: GWESLPFLTAGLQHCWALSTFTS*MSFNRT Trigger: GGTTCTGTTGAAAGACATCCAGGATGTGAATGTGGA...GAGAGCCCAGCAGTGTTGGAGCCCAGCTGTCAGGAATGGAAGGCTCTCCCAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| 3UTR CAA 72 bp | CACACCCTGCATCCTGATAGATGCAACCTTTCTGGGTaGTGGCAGAGGTCTAGCCCAAGGTTCTGCAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: HTLHPDRCNLSG*WQRSSPRFCKV Trigger: CACTTTGCAGAACCTTGGGCTAGACCTCTGCCACAACCCAGAAAGGTTGCATCTATCAGGATGCAGGGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
||
| CDS-3UTR TCA 90 bp | TTGAGGGATGGTCAGAGGGAACAGACATCACTGTGCATAGGAGTGTGTCTGCCCCAAATAGGCAGCCTGTaGCATAGAAGAGCTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LRDGQREQTSLCIGVCLPQIGSL*HRRASS Trigger: GCTGGAAGCTCTTCTATGTCACAGGCTGCCTATTTG...GGGCAGACACACTCCTATGCACAGTGATGTCTGTTCCCTCTGACCATCCCTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| CDS-3UTR GCA 90 bp | TGTGTCTCCACATGCCTGTTTTCTTCAGGTCTTTTCAAGGCTCGAAAGGCTAAGGCGTCGGCCCATGACTaGACTCTGAGTGAGAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: CVSTCLFSSGLFKARKAKASAHD*TLSERV Trigger: CACCCTCTCACTCAGAGTGCAGTCATGGGCCGACGC...CTTAGCCTTTCGAGCCTTGAAAAGACCTGAAGAAAACAGGCATGTGGAGACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| CDS-3UTR CCA 90 bp | AGGGACCATATTCCCCAAGTCAGAACTAGTGGCAGTCACTTCAGAAGACCTGTTCCAAGACCGGATGCCTaGAGCCCTCTTCAGATGGAG | + |
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Preference number: 4 (lower is better) Translates to: RDHIPQVRTSGSHFRRPVPRPDA*SPLQME Trigger: CTCCATCTGAAGAGGGCTCCAGGCATCCGGTCTTGG...AACAGGTCTTCTGAAGTGACTGCCACTAGTTCTGACTTGGGGAATATGGTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| CDS-3UTR CCA 90 bp | CTGATAGATGCAACCTTTCTGGGTTGTGGCAGAGGTCTAGCCCAAGGTTCTGCACAGCAGCCAGGCCAGTaGATAATATTCCGACCAGCA | + |
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Preference number: 4 (lower is better) Translates to: LIDATFLGCGRGLAQGSAQQPGQ*IIFRPA Trigger: TGCTGGTCGGAATATTATCCACTGGCCTGGCTGCTG...TGCAGAACCTTGGGCTAGACCTCTGCCACAACCCAGAAAGGTTGCATCTATCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| CDS-3UTR CCA 90 bp | ACAAGCAAAAGGCAGGTGGCCCATAGTAGAACTGCCCAAGGAGCCACAGGCAGGTCCACATTCACATCCTaGATGTCTTTCAACAGAACC | + |
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Preference number: 4 (lower is better) Translates to: TSKRQVAHSRTAQGATGRSTFTS*MSFNRT Trigger: GGTTCTGTTGAAAGACATCCAGGATGTGAATGTGGA...CCTGCCTGTGGCTCCTTGGGCAGTTCTACTATGGGCCACCTGCCTTTTGCTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR CAA 72 bp | CAGGCAGGTGCCCAAGATCTGCCTGTACCCTTACAATaGTCAAGTCGGTTGGAGATGCATCAGAAGTGGATG | + |
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Preference number: 4 (lower is better) Translates to: QAGAQDLPVPLQ*SSRLEMHQKWM Trigger: CATCCACTTCTGATGCATCTCCAACCGACTTGACAATTGTAAGGGTACAGGCAGATCTTGGGCACCTGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| CDS-3UTR GCA 90 bp | GGGATTTATTGGGCTGTGTCTCCACATGCCTGTTTTCTTCAGGTCTTTTCAAGGGTGGGAGAAGCCTGTTaGAAACCGGAGCACCACCAT | + |
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Preference number: 4 (lower is better) Translates to: GIYWAVSPHACFLQVFSRVGEAC*KPEHHH Trigger: ATGGTGGTGCTCCGGTTTGCAACAGGCTTCTCCCAC...CCTTGAAAAGACCTGAAGAAAACAGGCATGTGGAGACACAGCCCAATAAATCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR CAA 72 bp | CGTTCTTCCCGCTGCAGTTCTCAACACTGGGATTTATaGGGCTGTGTCTCCACATGCCTGTTTTCTTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: RSSRCSSQHWDL*GCVSTCLFSSG Trigger: ACCTGAAGAAAACAGGCATGTGGAGACACAGCCCAATAAATCCCAGTGTTGAGAACTGCAGCGGGAAGAACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| CDS-3UTR TCA 90 bp | AGGGACCATATTCCCCAAGTCAGAACTAGTGGCAGTCACTTCAGAAGACCTGTTTCCCAGTGTTCTTGTTaGAAATGGCCTCCTCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: RDHIPQVRTSGSHFRRPVSQCSC*KWPPPS Trigger: ACTGGGAGGAGGCCATTTTCAACAAGAACACTGGGA...AACAGGTCTTCTGAAGTGACTGCCACTAGTTCTGACTTGGGGAATATGGTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| CDS-3UTR TCA 90 bp | CTGTTTTCTTCAGGTCTTTTCAAGGCTCGAAAGGCTAAGACTGTTTCTGTAAGGCCCATGACTGCACTCTaGGTGAGAGGGTGGGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: LFSSGLFKARKAKTVSVRPMTAL*VRGWEK Trigger: CTTCTCCCACCCTCTCACTCAGAGTGCAGTCATGGG...CCTTACAGAAACAGTCTTAGCCTTTCGAGCCTTGAAAAGACCTGAAGAAAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| CDS-3UTR TCA 90 bp | AGGCCAGGCTGGGAACTTAGTAAACAATGTACTTTTGAGCAACTTGAGTCCACCCAAATAGGCAGCCTGTaGCATAGAAGAGCTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RPGWELSKQCTFEQLESTQIGSL*HRRASS Trigger: GCTGGAAGCTCTTCTATGTCACAGGCTGCCTATTTG...GGTGGACTCAAGTTGCTCAAAAGTACATTGTTTACTAAGTTCCCAGCCTGGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| CDS-3UTR CCA 90 bp | TGGGGAGAGAAATCTCTAACTTATCCACTTAAAAAGCTCACTTTGGCATGTTTAGATGGAGGCGGGTGCTaGTGCGTGTCTCCACCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: WGEKSLTYPLKKLTLACLDGGGC*CVSPPA Trigger: TGCAGGTGGAGACACGCACCAGCACCCGCCTCCATC...TAAACATGCCAAAGTGAGCTTTTTAAGTGGATAAGTTAGAGATTTCTCTCCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR CAA 72 bp | AGAGGCCAGGCTGGGAACTTAGTAAACAATGTACTTTaGAGCAACTTGAGTCCACCCAGAAGGAGACTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RGQAGNLVNNVL*SNLSPPRRRLE Trigger: TTCTAGTCTCCTTCTGGGTGGACTCAAGTTGCTCAAAAGTACATTGTTTACTAAGTTCCCAGCCTGGCCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| CDS-3UTR GCA 90 bp | TGGGGAGAGAAATCTCTAACTTATCCACTTAAAAAGCTCACTTTGGCATGTTTAGTGGGAGAAGCCTGTTaGAAACCGGAGCACCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: WGEKSLTYPLKKLTLACLVGEAC*KPEHHH Trigger: ATGGTGGTGCTCCGGTTTGCAACAGGCTTCTCCCAC...TAAACATGCCAAAGTGAGCTTTTTAAGTGGATAAGTTAGAGATTTCTCTCCCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR CAA 72 bp | GCTGGGAACTTAGTAAACAATGTACTTTTGAGCAACTaGAGTCCACCCAGAAGGAGACTAGAAGAGCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: AGNLVNNVLLSN*SPPRRRLEEQK Trigger: TTTCTGCTCTTCTAGTCTCCTTCTGGGTGGACTCAAGTTGCTCAAAAGTACATTGTTTACTAAGTTCCCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| 3UTR CAA 72 bp | GAGAAATCTCTAACTTATCCACTTAAAAAGCTCACTTaGGCATGTTTAAGGGACCATATTCCCCAAGTCAGA | + |
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Preference number: 4 (lower is better) Translates to: EKSLTYPLKKLT*ACLRDHIPQVR Trigger: TCTGACTTGGGGAATATGGTCCCTTAAACATGCCAAAGTGAGCTTTTTAAGTGGATAAGTTAGAGATTTCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| CDS GCA 90 bp | CCAGGCCAGTGGATAATATTCCGACCAGCAGGGACCAAGACCGGATaGCTGGAGCCCTCTTCAGATGGAGGCGGGTGCTGGTGCGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PGQWIIFRPAGTKTG*LEPSSDGGGCWCVS Trigger: AGACACGCACCAGCACCCGCCTCCATCTGAAGAGGGCTCCAGGCATCCGGTCTTGGTCCCTGCTGGTCGGAATATTATCCACTGGCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 ENSMUST00000137299.8 ENSMUST00000147490.6 ENSMUST00000169393.8 |
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| CDS-3UTR CAA 90 bp | GGTTGGGAGAGCCTTCCATTCCTGACAGCTGGGCTCCAACACTGCTGGGCTCTCGGTGGGAGAAGCCTGTaGCAAACCGGAGCACCACCA | + |
|
Preference number: 5 (lower is better) Translates to: GWESLPFLTAGLQHCWALGGRSL*QTGAPP Trigger: TGGTGGTGCTCCGGTTTGCAACAGGCTTCTCCCACC...GAGAGCCCAGCAGTGTTGGAGCCCAGCTGTCAGGAATGGAAGGCTCTCCCAACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| CDS-3UTR CAA 90 bp | GGTTGGGAGAGCCTTCCATTCCTGACAGCTGGGCTCCAACACTGCTGGGCTCTCCAACAGAACCACCACTaGATCGTGGCCCGCTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GWESLPFLTAGLQHCWALQQNHH*IVARSE Trigger: CTCAGAGCGGGCCACGATCAAGTGGTGGTTCTGTTG...GAGAGCCCAGCAGTGTTGGAGCCCAGCTGTCAGGAATGGAAGGCTCTCCCAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| CDS TCA 90 bp | TTGGCAATGGCTTCCACATCACTGCGTCGGCCCATGACTGCACTCTaGGTGAGAGGGTGGGAGAAGCCTGTTGCAAACCGGAGCACCACC | + |
|
Preference number: 5 (lower is better) Translates to: LAMASTSLRRPMTAL*VRGWEKPVANRSTT Trigger: GGTGGTGCTCCGGTTTGCAACAGGCTTCTCCCACCCTCTCACTCAGAGTGCAGTCATGGGCCGACGCAGTGATGTGGAAGCCATTGCCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| CDS GCA 90 bp | TCACTGTCGCTGCTCTGTGACCGTTCTGAGGGGCTCTCCAGGCGGTaGAGCTCCAAGAAGCTAGTGATGAGTTTGGCAATGGCTTCCACA | + |
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Preference number: 5 (lower is better) Translates to: SLSLLCDRSEGLSRR*SSKKLVMSLAMAST Trigger: TGTGGAAGCCATTGCCAAACTCATCACTAGCTTCTTGGAGCTGCACCGCCTGGAGAGCCCCTCAGAACGGTCACAGAGCAGCGACAGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| CDS-3UTR CAA 90 bp | GGTTGGGAGAGCCTTCCATTCCTGACAGCTGGGCTCCAACACTGCTGGGCTCTCTTCCCAGTGTTCTTGTaGAAAATGGCCTCCTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GWESLPFLTAGLQHCWALFPVFL*KMASSQ Trigger: CTGGGAGGAGGCCATTTTCAACAAGAACACTGGGAA...GAGAGCCCAGCAGTGTTGGAGCCCAGCTGTCAGGAATGGAAGGCTCTCCCAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| CDS-3UTR CAA 90 bp | TTGAGGGATGGTCAGAGGGAACAGACATCACTGTGCATAGGAGTGTGTCTGCCCCAACAGAACCACCACTaGATCGTGGCCCGCTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LRDGQREQTSLCIGVCLPQQNHH*IVARSE Trigger: CTCAGAGCGGGCCACGATCAAGTGGTGGTTCTGTTG...GGGCAGACACACTCCTATGCACAGTGATGTCTGTTCCCTCTGACCATCCCTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| CDS-3UTR CAA 90 bp | GGTTGGGAGAGCCTTCCATTCCTGACAGCTGGGCTCCAACACTGCTGGGCTCTCAAGCTAGTGATGAGTTaGGCAATGGCTTCCACATCA | + |
|
Preference number: 5 (lower is better) Translates to: GWESLPFLTAGLQHCWALKLVMS*AMASTS Trigger: TGATGTGGAAGCCATTGCCAAACTCATCACTAGCTT...GAGAGCCCAGCAGTGTTGGAGCCCAGCTGTCAGGAATGGAAGGCTCTCCCAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| CDS-3UTR CAA 90 bp | AGTCAGCAGCACTCGGATTCCTCTGAGAGTTCTGTGGTCAGGTGTCCAGCATCCTTCCCAGTGTTCTTGTaGAAAATGGCCTCCTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SQQHSDSSESSVVRCPASFPVFL*KMASSQ Trigger: CTGGGAGGAGGCCATTTTCAACAAGAACACTGGGAA...GGATGCTGGACACCTGACCACAGAACTCTCAGAGGAATCCGAGTGCTGCTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| CDS TCA 90 bp | CCTCCCAGTCTTCCAAGTTCTGTACAGCCACAAATAGGCAGCCTGTaGCATAGAAGAGCTTCCAGCCCAGACTATCTCCACTGTAATAGG | + |
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Preference number: 5 (lower is better) Translates to: PPSLPSSVQPQIGSL*HRRASSPDYLHCNR Trigger: CCTATTACAGTGGAGATAGTCTGGGCTGGAAGCTCTTCTATGTCACAGGCTGCCTATTTGTGGCTGTACAGAACTTGGAAGACTGGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 ENSMUST00000137299.8 ENSMUST00000147490.6 |
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| CDS-3UTR CAA 90 bp | GCCACAGCTTCCAGGCCTAGAGGCCAGGCTGGGAACTTAGTAAACAATGTACTTAAGCTAGTGATGAGTTaGGCAATGGCTTCCACATCA | + |
|
Preference number: 5 (lower is better) Translates to: ATASRPRGQAGNLVNNVLKLVMS*AMASTS Trigger: TGATGTGGAAGCCATTGCCAAACTCATCACTAGCTT...AAGTACATTGTTTACTAAGTTCCCAGCCTGGCCTCTAGGCCTGGAAGCTGTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| CDS GCA 72 bp | AACTCTGGCCACCAGGGCCATCAGGTTCACTGTCGCTaGTCTGTGACCGTTCTGAGGGGCTCTCCAGGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: NSGHQGHQVHCR*SVTVLRGSPGG Trigger: ACCGCCTGGAGAGCCCCTCAGAACGGTCACAGAGCAGCGACAGTGAACCTGATGGCCCTGGTGGCCAGAGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| CDS CCA 72 bp | AGGGACCAAGACCGGATGCCTGGAGCCCTCTTCAGATaGAGGCGGGTGCTGGTGCGTGTCTCCACCTGCATA | + |
|
Preference number: 6 (lower is better) Translates to: RDQDRMPGALFR*RRVLVRVSTCI Trigger: TATGCAGGTGGAGACACGCACCAGCACCCGCCTCCATCTGAAGAGGGCTCCAGGCATCCGGTCTTGGTCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 ENSMUST00000137299.8 ENSMUST00000147490.6 ENSMUST00000169393.8 |
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| CDS TCA 72 bp | GCTTCCACATCACTGCGTCGGCCCATGACTGCACTCTaGGTGAGAGGGTGGGAGAAGCCTGTTGCAAACCGG | + |
|
Preference number: 6 (lower is better) Translates to: ASTSLRRPMTAL*VRGWEKPVANR Trigger: CCGGTTTGCAACAGGCTTCTCCCACCCTCTCACTCAGAGTGCAGTCATGGGCCGACGCAGTGATGTGGAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| CDS GCA 72 bp | TGGATAATATTCCGACCAGCAGGGACCAAGACCGGATaGCTGGAGCCCTCTTCAGATGGAGGCGGGTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: WIIFRPAGTKTG*LEPSSDGGGCW Trigger: CCAGCACCCGCCTCCATCTGAAGAGGGCTCCAGGCATCCGGTCTTGGTCCCTGCTGGTCGGAATATTATCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 ENSMUST00000137299.8 ENSMUST00000147490.6 ENSMUST00000169393.8 |
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| CDS GCA 72 bp | GGCAATGGCTTCCACATCACTGCGTCGGCCCATGACTaGACTCTGAGTGAGAGGGTGGGAGAAGCCTGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: GNGFHITASAHD*TLSERVGEACC Trigger: GCAACAGGCTTCTCCCACCCTCTCACTCAGAGTGCAGTCATGGGCCGACGCAGTGATGTGGAAGCCATTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| CDS CAA 90 bp | GAGGGGCTCTCCAGGCGGTGCAGCTCCAAGAAGCTAGTGATGAGTTaGGCAATGGCTTCCACATCACTGCGTCGGCCCATGACTGCACTC | + |
|
Preference number: 6 (lower is better) Translates to: EGLSRRCSSKKLVMS*AMASTSLRRPMTAL Trigger: GAGTGCAGTCATGGGCCGACGCAGTGATGTGGAAGCCATTGCCAAACTCATCACTAGCTTCTTGGAGCTGCACCGCCTGGAGAGCCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| CDS CAA 72 bp | TCCAGGCGGTGCAGCTCCAAGAAGCTAGTGATGAGTTaGGCAATGGCTTCCACATCACTGCGTCGGCCCATG | + |
|
Preference number: 6 (lower is better) Translates to: SRRCSSKKLVMS*AMASTSLRRPM Trigger: CATGGGCCGACGCAGTGATGTGGAAGCCATTGCCAAACTCATCACTAGCTTCTTGGAGCTGCACCGCCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 |
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| CDS CAA 90 bp | CTCCTCCACATTCACATCCTGGATGTCTTTCAACAGAACCACCACTaGATCGTGGCCCGCTCTGAGAAGAGTCAGCAGCTTCTTGTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: LLHIHILDVFQQNHH*IVARSEKSQQLLVE Trigger: CTCTACAAGAAGCTGCTGACTCTTCTCAGAGCGGGCCACGATCAAGTGGTGGTTCTGTTGAAAGACATCCAGGATGTGAATGTGGAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 ENSMUST00000137299.8 ENSMUST00000147490.6 ENSMUST00000169393.8 |
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| CDS TCA 72 bp | TTCACATCCTGGATGTCTTTCAACAGAACCACCACTTaGTCGTGGCCCGCTCTGAGAAGAGTCAGCAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: FTSWMSFNRTTT*SWPALRRVSSF Trigger: GAAGCTGCTGACTCTTCTCAGAGCGGGCCACGATCAAGTGGTGGTTCTGTTGAAAGACATCCAGGATGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 ENSMUST00000137299.8 ENSMUST00000147490.6 ENSMUST00000169393.8 |
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| CDS CAA 72 bp | ATTCACATCCTGGATGTCTTTCAACAGAACCACCACTaGATCGTGGCCCGCTCTGAGAAGAGTCAGCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: IHILDVFQQNHH*IVARSEKSQQL Trigger: AAGCTGCTGACTCTTCTCAGAGCGGGCCACGATCAAGTGGTGGTTCTGTTGAAAGACATCCAGGATGTGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000038709.14 ENSMUST00000106115.8 ENSMUST00000137299.8 ENSMUST00000147490.6 ENSMUST00000169393.8 |
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| CDS CAA 72 bp | AGGCTGAATGTTTTTAAGATGACCTTCCCAGTGTTCTaGTTGAAAATGGCCTCCTCCACTGTAATAGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RLNVFKMTFPVF*LKMASSTVIGS Trigger: GCTGCCTATTACAGTGGAGGAGGCCATTTTCAACAAGAACACTGGGAAGGTCATCTTAAAAACATTCAGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169393.8 |
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