Pregenerated sensors for CYBB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015340Ensembl transcript IDs: ENSMUST00000015484.10, ENSMUST00000164685.8, ENSMUST00000170885.2
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCCTCCCTTCAAATGACAGTTGGATGAATACCAGTAGAATGGCCTaGCTCTCCCTATTGGTTCATATCTTTCTCTCTACTCCCAGGGGA | + |
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Preference number: 1 (lower is better) Translates to: LLPSNDSWMNTSRMA*LSLLVHIFLSTPRG Trigger: TCCCCTGGGAGTAGAGAGAAAGATATGAACCAATAGGGAGAGTCAGGCCATTCTACTGGTATTCATCCAACTGTCATTTGAAGGGAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| 3UTR TCA 90 bp | TGGGATTCTTTTTCTCCTCCTGGGTTGCCTCATCCAGCCTTGATATaGGGGTTTGTGCCTAGTCTTATTGCATCTTGTTATGCTGTGTTC | + |
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Preference number: 1 (lower is better) Translates to: WDSFSPPGLPHPALI*GFVPSLIASCYAVF Trigger: GAACACAGCATAACAAGATGCAATAAGACTAGGCACAAACCCTCATATCAAGGCTGGATGAGGCAACCCAGGAGGAGAAAAAGAATCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| 3UTR TCA 90 bp | GCTTATGGGATTCTTTTTCTCCTCCTGGGTTGCCTCATCCAGCCTTaGTATGAGGGTTTGTGCCTAGTCTTATTGCATCTTGTTATGCTG | + |
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Preference number: 1 (lower is better) Translates to: AYGILFLLLGCLIQP*YEGLCLVLLHLVML Trigger: CAGCATAACAAGATGCAATAAGACTAGGCACAAACCCTCATATCAAGGCTGGATGAGGCAACCCAGGAGGAGAAAAAGAATCCCATAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| 3UTR TCA 90 bp | CTAGTAAGGATCTTTGGAATTCCTTTTAGGGGGCCTGTGTCATTGTaGTTTCCTTTCCTCCTTCTCTCCTACAACCAACCAGCATTACTG | + |
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Preference number: 1 (lower is better) Translates to: LVRIFGIPFRGPVSL*FPFLLLSYNQPALL Trigger: CAGTAATGCTGGTTGGTTGTAGGAGAGAAGGAGGAAAGGAAATCACAATGACACAGGCCCCCTAAAAGGAATTCCAAAGATCCTTACTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| 3UTR GCA 90 bp | CTAGATCATCTTCTCCCACTCACCAGACTGTTCATATACAATGGCTaGAAGTATTCAAATTCCATAAACATGATATTGCAAAAGCGGGGA | + |
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Preference number: 1 (lower is better) Translates to: LDHLLPLTRLFIYNG*KYSNSINMILQKRG Trigger: TCCCCGCTTTTGCAATATCATGTTTATGGAATTTGAATACTTGCAGCCATTGTATATGAACAGTCTGGTGAGTGGGAGAAGATGATCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| 3UTR CCA 90 bp | ATCTCTAGATCATCTTCTCCCACTCACCAGACTGTTCATATACAATaGCTGCAAGTATTCAAATTCCATAAACATGATATTGCAAAAGCG | + |
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Preference number: 1 (lower is better) Translates to: ISRSSSPTHQTVHIQ*LQVFKFHKHDIAKA Trigger: CGCTTTTGCAATATCATGTTTATGGAATTTGAATACTTGCAGCCATTGTATATGAACAGTCTGGTGAGTGGGAGAAGATGATCTAGAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| 3UTR CAA 90 bp | AATGACCTAATGCCTAGGGTGCAACACGAAGGTCTGTCTGGACCTTaGTCCCAGGGCAACAATTCTCCTGGTACCATGTGCACATCTAGG | + |
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Preference number: 2 (lower is better) Translates to: NDLMPRVQHEGLSGP*SQGNNSPGTMCTSR Trigger: CCTAGATGTGCACATGGTACCAGGAGAATTGTTGCCCTGGGACAAAGGTCCAGACAGACCTTCGTGTTGCACCCTAGGCATTAGGTCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| 3UTR-3UTR CCA 90 bp | CTTCTCCCACTCACCAGACTGTTCATATACAATGGCTGCAAGTATTCAAATTCCACACGAAGGTCTGTCTaGACCTTTGTCCCAGGGCAA | + |
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Preference number: 2 (lower is better) Translates to: LLPLTRLFIYNGCKYSNSTRRSV*TFVPGQ Trigger: TTGCCCTGGGACAAAGGTCCAGACAGACCTTCGTGT...GGAATTTGAATACTTGCAGCCATTGTATATGAACAGTCTGGTGAGTGGGAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| 3UTR-3UTR CCA 90 bp | GCACAGATATCTAAATTATGCTCTTCCAAACTCTCCGCAGTCTGTCCACGTACAATTCGTTCAGCTCCATaGATGGCAAGGCCGATGAAG | + |
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Preference number: 2 (lower is better) Translates to: AQISKLCSSKLSAVCPRTIRSAP*MARPMK Trigger: CTTCATCGGCCTTGCCATCCATGGAGCTGAACGAAT...TGTACGTGGACAGACTGCGGAGAGTTTGGAAGAGCATAATTTAGATATCTGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164685.8 |
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| 3UTR-3UTR TCA 90 bp | TGGGGGCTTGGGAGCAAAAAGAAGGAAGTTCTCAAACAACAAGCACATGTGCACAGTGCTCTGAAACCATaGAGTTCCATGCAATATGAC | + |
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Preference number: 2 (lower is better) Translates to: WGLGSKKKEVLKQQAHVHSALKP*SSMQYD Trigger: GTCATATTGCATGGAACTTCATGGTTTCAGAGCACT...GTGCACATGTGCTTGTTGTTTGAGAACTTCCTTCTTTTTGCTCCCAAGCCCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| 3UTR-3UTR CCA 90 bp | ACTCTCCCTATTGGTTCATATCTTTCTCTCTACTCCCAGGGGAATCAGGATACTCATTACTGGGACATTTaGCAGCATACACTGGTTTCC | + |
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Preference number: 2 (lower is better) Translates to: TLPIGSYLSLYSQGNQDTHYWDI*QHTLVS Trigger: GGAAACCAGTGTATGCTGCCAAATGTCCCAGTAATG...AGTATCCTGATTCCCCTGGGAGTAGAGAGAAAGATATGAACCAATAGGGAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| 3UTR-3UTR TCA 90 bp | CTGACCTTGAACACCAATTCTGCCAAACACCATGGTAAATGTAGAGTGCTACTTTTAAAGGTGAAAAGGTaGCCACACCCAGAGTCAGAT | + |
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Preference number: 2 (lower is better) Translates to: LTLNTNSAKHHGKCRVLLLKVKR*PHPESD Trigger: ATCTGACTCTGGGTGTGGTCACCTTTTCACCTTTAA...AAGTAGCACTCTACATTTACCATGGTGTTTGGCAGAATTGGTGTTCAAGGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| 3UTR-3UTR GCA 90 bp | CAGTCATCTAGACTCTGTCTTGCATTTCTGGATGCCCATAAAATATCGGATGTGCCCAGAAAATGCTTTTaGCTTACCCTCTTCTGGCAT | + |
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Preference number: 2 (lower is better) Translates to: QSSRLCLAFLDAHKISDVPRKCF*LTLFWH Trigger: ATGCCAGAAGAGGGTAAGGCAAAAGCATTTTCTGGG...CACATCCGATATTTTATGGGCATCCAGAAATGCAAGACAGAGTCTAGATGACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| 3UTR-3UTR GCA 90 bp | TTAGAACACGGTGTTTTCAGAGTCCTTGTAACTGAGATCAAACTTTGCCACAAACTCCATCAAGGCCTCTaGTCTCTACTCTTCCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: LEHGVFRVLVTEIKLCHKLHQGL*SLLFLP Trigger: AGGAAGGAAGAGTAGAGAGCAGAGGCCTTGATGGAG...TTTGTGGCAAAGTTTGATCTCAGTTACAAGGACTCTGAAAACACCGTGTTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| 3UTR-3UTR GCA 90 bp | TTCTCCCACTCACCAGACTGTTCATATACAATGGCTGCAAGTATTCAAATTCCATCTCCTGGTACCATGTaGACATCTAGGAAGGCCTTA | + |
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Preference number: 2 (lower is better) Translates to: FSHSPDCSYTMAASIQIPSPGTM*TSRKAL Trigger: TAAGGCCTTCCTAGATGTGCACATGGTACCAGGAGA...TGGAATTTGAATACTTGCAGCCATTGTATATGAACAGTCTGGTGAGTGGGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| 3UTR-3UTR TCA 90 bp | TTAGAACACGGTGTTTTCAGAGTCCTTGTAACTGAGATCAAACTTTGCCACAAAACCAGTAGAATGGCCTaGCTCTCCCTATTGGTTCAT | + |
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Preference number: 2 (lower is better) Translates to: LEHGVFRVLVTEIKLCHKTSRMA*LSLLVH Trigger: ATGAACCAATAGGGAGAGTCAGGCCATTCTACTGGT...TTTGTGGCAAAGTTTGATCTCAGTTACAAGGACTCTGAAAACACCGTGTTCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| 3UTR-3UTR GCA 90 bp | CTTCTCCCACTCACCAGACTGTTCATATACAATGGCTGCAAGTATTCAAATTCCTATTGCATCTTGTTATaGTGTGTTCTCTGGGAGGTC | + |
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Preference number: 2 (lower is better) Translates to: LLPLTRLFIYNGCKYSNSYCILL*CVLWEV Trigger: GACCTCCCAGAGAACACAGCATAACAAGATGCAATA...GGAATTTGAATACTTGCAGCCATTGTATATGAACAGTCTGGTGAGTGGGAGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| 3UTR-3UTR CCA 90 bp | TTAGAACACGGTGTTTTCAGAGTCCTTGTAACTGAGATCAAACTTTGCCACAAATTTGGCAGCATACACTaGTTTCCTGGTGAAAGAGCG | + |
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Preference number: 2 (lower is better) Translates to: LEHGVFRVLVTEIKLCHKFGSIH*FPGERA Trigger: CGCTCTTTCACCAGGAAACCAGTGTATGCTGCCAAA...TTTGTGGCAAAGTTTGATCTCAGTTACAAGGACTCTGAAAACACCGTGTTCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| 3UTR-3UTR CCA 90 bp | TTCTCCCACTCACCAGACTGTTCATATACAATGGCTGCAAGTATTCAAATTCCATGCCTTACCCTCTTCTaGCATGTCAAAGGGAAATGT | + |
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Preference number: 2 (lower is better) Translates to: FSHSPDCSYTMAASIQIPCLTLF*HVKGKC Trigger: ACATTTCCCTTTGACATGCCAGAAGAGGGTAAGGCA...TGGAATTTGAATACTTGCAGCCATTGTATATGAACAGTCTGGTGAGTGGGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| 3UTR-3UTR CCA 90 bp | ACTCTCCCTATTGGTTCATATCTTTCTCTCTACTCCCAGGGGAATCAGGATACTATTGGAAGGAAGGTGTaGAACTCATTTGAGATCCTA | + |
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Preference number: 2 (lower is better) Translates to: TLPIGSYLSLYSQGNQDTIGRKV*NSFEIL Trigger: TAGGATCTCAAATGAGTTCCACACCTTCCTTCCAAT...AGTATCCTGATTCCCCTGGGAGTAGAGAGAAAGATATGAACCAATAGGGAGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| 3UTR CAA 90 bp | ATTGGTTCATATCTTTCTCTCTACTCCCAGGGGAATCAGGATACTTaGGTGTGTAAAAGAAACAGAAGGGTAATTCTGTCTCTGGCCATA | + |
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Preference number: 2 (lower is better) Translates to: IGSYLSLYSQGNQDT*VCKRNRRVILSLAI Trigger: TATGGCCAGAGACAGAATTACCCTTCTGTTTCTTTTACACACCAAAGTATCCTGATTCCCCTGGGAGTAGAGAGAAAGATATGAACCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| 3UTR-3UTR TCA 90 bp | TTCCCCATTCTTCGATTTTGTCTGCACAGATATCTAAATTATGCTCTTCCAAACGGATGGCAAGGCCGATaGAGAAGATCACAAAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: FPILRFCLHRYLNYALPNGWQGR*RRSQRD Trigger: ATCTCTTTGTGATCTTCTTCATCGGCCTTGCCATCC...GTTTGGAAGAGCATAATTTAGATATCTGTGCAGACAAAATCGAAGAATGGGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164685.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCTCCCACTCACCAGACTGTTCATATACAATGGCTGCAAGTATTCAAATTCCTTTCAACTTCTGAATTaGAAGGAAGGTGTGGAACTC | + |
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Preference number: 2 (lower is better) Translates to: LLPLTRLFIYNGCKYSNSFQLLN*KEGVEL Trigger: GAGTTCCACACCTTCCTTCCAATTCAGAAGTTGAAA...GGAATTTGAATACTTGCAGCCATTGTATATGAACAGTCTGGTGAGTGGGAGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| 3UTR-3UTR CCA 90 bp | TTCTCCCACTCACCAGACTGTTCATATACAATGGCTGCAAGTATTCAAATTCCATCTGTCTTGCATTTCTaGATGCCCATAAAATATCGG | + |
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Preference number: 2 (lower is better) Translates to: FSHSPDCSYTMAASIQIPSVLHF*MPIKYR Trigger: CCGATATTTTATGGGCATCCAGAAATGCAAGACAGA...TGGAATTTGAATACTTGCAGCCATTGTATATGAACAGTCTGGTGAGTGGGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| 3UTR-3UTR TCA 90 bp | TTAGAACACGGTGTTTTCAGAGTCCTTGTAACTGAGATCAAACTTTGCCACAAAGGTGTGGAACTCATTTaGGATCCTATTGTTTATCCT | + |
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Preference number: 2 (lower is better) Translates to: LEHGVFRVLVTEIKLCHKGVELI*DPIVYP Trigger: AGGATAAACAATAGGATCTCAAATGAGTTCCACACC...TTTGTGGCAAAGTTTGATCTCAGTTACAAGGACTCTGAAAACACCGTGTTCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| 3UTR-3UTR CCA 90 bp | TTAGAACACGGTGTTTTCAGAGTCCTTGTAACTGAGATCAAACTTTGCCACAAACCTGACTCTCCCTATTaGTTCATATCTTTCTCTCTA | + |
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Preference number: 2 (lower is better) Translates to: LEHGVFRVLVTEIKLCHKPDSPY*FISFSL Trigger: TAGAGAGAAAGATATGAACCAATAGGGAGAGTCAGG...TTTGTGGCAAAGTTTGATCTCAGTTACAAGGACTCTGAAAACACCGTGTTCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| 3UTR-3UTR GCA 90 bp | AAACAGAAGGGTAATTCTGTCTCTGGCCATACATTCCATTATGATATAGTTCTGTGGAATATACTTCTGTaGCGATACTGTCATTTAGGA | + |
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Preference number: 2 (lower is better) Translates to: KQKGNSVSGHTFHYDIVLWNILL*RYCHLG Trigger: TCCTAAATGACAGTATCGGCACAGAAGTATATTCCA...CAGAACTATATCATAATGGAATGTATGGCCAGAGACAGAATTACCCTTCTGTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| 3UTR TCA 72 bp | GGGTGGGTGACCACCTTGGTGATGACCACCTTTTGCTaGGATCGCCAAAACCGAACCAACCTCTCACAAAGG | + |
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Preference number: 3 (lower is better) Translates to: GWVTTLVMTTFC*DRQNRTNLSQR Trigger: CCTTTGTGAGAGGTTGGTTCGGTTTTGGCGATCTCAGCAAAAGGTGGTCATCACCAAGGTGGTCACCCACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164685.8 |
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| 3UTR TCA 72 bp | AGCGAACAAGAGCATAGCAGGAACATAAGGAGAATCTaGGCTCTCCCTTCGTCTAGTCCCTTCAAAATCTTC | + |
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Preference number: 3 (lower is better) Translates to: SEQEHSRNIRRI*ALPSSSPFKIF Trigger: GAAGATTTTGAAGGGACTAGACGAAGGGAGAGCTCAGATTCTCCTTATGTTCCTGCTATGCTCTTGTTCGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| 3UTR TCA 72 bp | AGTGTTAGCCACCATCATCATAGGAGAATAGGTCTCTaGATTCATGCCTCCTCCCTTCAAATGACAGTTGGA | + |
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Preference number: 3 (lower is better) Translates to: SVSHHHHRRIGL*IHASSLQMTVG Trigger: TCCAACTGTCATTTGAAGGGAGGAGGCATGAATTCAGAGACCTATTCTCCTATGATGATGGTGGCTAACACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| 3UTR TCA 72 bp | ATTCTTTTTCTCCTCCTGGGTTGCCTCATCCAGCCTTaGTATGAGGGTTTGTGCCTAGTCTTATTGCATCTT | + |
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Preference number: 3 (lower is better) Translates to: ILFLLLGCLIQP*YEGLCLVLLHL Trigger: AAGATGCAATAAGACTAGGCACAAACCCTCATATCAAGGCTGGATGAGGCAACCCAGGAGGAGAAAAAGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| 3UTR GCA 72 bp | GATCCTATTGTTTATCCTAGAGAGAGTCCCAGAAAATaGTTTTGCCTTACCCTCTTCTGGCATGTCAAAGGG | + |
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Preference number: 3 (lower is better) Translates to: DPIVYPRESPRK*FCLTLFWHVKG Trigger: CCCTTTGACATGCCAGAAGAGGGTAAGGCAAAAGCATTTTCTGGGACTCTCTCTAGGATAAACAATAGGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| 3UTR-3UTR CAA 90 bp | TGGGGGCTTGGGAGCAAAAAGAAGGAAGTTCTCAAACAACAAGCACATGTGCACTCATTTGAGATCCTATaGTTTATCCTAGAGAGAGTC | + |
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Preference number: 3 (lower is better) Translates to: WGLGSKKKEVLKQQAHVHSFEIL*FILERV Trigger: GACTCTCTCTAGGATAAACAATAGGATCTCAAATGA...GTGCACATGTGCTTGTTGTTTGAGAACTTCCTTCTTTTTGCTCCCAAGCCCCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| 3UTR GCA 72 bp | TCTATTTTGGGAACTATGTTGATATCAACCCTAGCCTaGTTATGGGATTCTTTTTCTCCTCCTGGGTTGCCT | + |
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Preference number: 3 (lower is better) Translates to: SILGTMLISTLA*LWDSFSPPGLP Trigger: AGGCAACCCAGGAGGAGAAAAAGAATCCCATAAGCAGGCTAGGGTTGATATCAACATAGTTCCCAAAATAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| 3UTR CCA 72 bp | GAGAGTCCCAGAAAATGCTTTTGCCTTACCCTCTTCTaGCATGTCAAAGGGAAATGTGAAACAATGCATAAC | + |
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Preference number: 3 (lower is better) Translates to: ESPRKCFCLTLF*HVKGKCETMHN Trigger: GTTATGCATTGTTTCACATTTCCCTTTGACATGCCAGAAGAGGGTAAGGCAAAAGCATTTTCTGGGACTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| 3UTR TCA 72 bp | CAACTTCTGAATTGGAAGGAAGGTGTGGAACTCATTTaGGATCCTATTGTTTATCCTAGAGAGAGTCCCAGA | + |
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Preference number: 3 (lower is better) Translates to: QLLNWKEGVELI*DPIVYPRESPR Trigger: TCTGGGACTCTCTCTAGGATAAACAATAGGATCTCAAATGAGTTCCACACCTTCCTTCCAATTCAGAAGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| 3UTR GCA 72 bp | CATTCTTCGATTTTGTCTGCACAGATATCTAAATTATaGTCTTCCAAACTCTCCGCAGTCTGTCCACGTACA | + |
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Preference number: 3 (lower is better) Translates to: HSSILSAQISKL*SSKLSAVCPRT Trigger: TGTACGTGGACAGACTGCGGAGAGTTTGGAAGAGCATAATTTAGATATCTGTGCAGACAAAATCGAAGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164685.8 |
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| 3UTR-3UTR CAA 90 bp | CAGTCATCTAGACTCTGTCTTGCATTTCTGGATGCCCATAAAATATCGGATGTGAGGTGTGGAACTCATTaGAGATCCTATTGTTTATCC | + |
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Preference number: 3 (lower is better) Translates to: QSSRLCLAFLDAHKISDVRCGTH*RSYCLS Trigger: GGATAAACAATAGGATCTCAAATGAGTTCCACACCT...CACATCCGATATTTTATGGGCATCCAGAAATGCAAGACAGAGTCTAGATGACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| 3UTR TCA 72 bp | TCAAATGACAGTTGGATGAATACCAGTAGAATGGCCTaGCTCTCCCTATTGGTTCATATCTTTCTCTCTACT | + |
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Preference number: 3 (lower is better) Translates to: SNDSWMNTSRMA*LSLLVHIFLST Trigger: AGTAGAGAGAAAGATATGAACCAATAGGGAGAGTCAGGCCATTCTACTGGTATTCATCCAACTGTCATTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| 3UTR GCA 72 bp | CTTCTCCCACTCACCAGACTGTTCATATACAATGGCTaGAAGTATTCAAATTCCATAAACATGATATTGCAA | + |
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Preference number: 3 (lower is better) Translates to: LLPLTRLFIYNG*KYSNSINMILQ Trigger: TTGCAATATCATGTTTATGGAATTTGAATACTTGCAGCCATTGTATATGAACAGTCTGGTGAGTGGGAGAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| 3UTR TCA 72 bp | AAAAAGTGCTCTGAAACCATGAAGTTCCATGCAATATaGCAGATGACTAGTAAGGATCTTTGGAATTCCTTT | + |
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Preference number: 3 (lower is better) Translates to: KKCSETMKFHAI*QMTSKDLWNSF Trigger: AAAGGAATTCCAAAGATCCTTACTAGTCATCTGTCATATTGCATGGAACTTCATGGTTTCAGAGCACTTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| 3UTR GCA 72 bp | ACACCAATTCTGCCAAACACCATGGTAAATGTAGAGTaGTACTTTAACTCCAATCAGTCTAATATTTCTTAC | + |
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Preference number: 3 (lower is better) Translates to: TPILPNTMVNVE*YFNSNQSNISY Trigger: GTAAGAAATATTAGACTGATTGGAGTTAAAGTAGCACTCTACATTTACCATGGTGTTTGGCAGAATTGGTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| 3UTR CCA 72 bp | TCATCTTCTCCCACTCACCAGACTGTTCATATACAATaGCTGCAAGTATTCAAATTCCATAAACATGATATT | + |
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Preference number: 3 (lower is better) Translates to: SSSPTHQTVHIQ*LQVFKFHKHDI Trigger: AATATCATGTTTATGGAATTTGAATACTTGCAGCCATTGTATATGAACAGTCTGGTGAGTGGGAGAAGATGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS-3UTR GCA 90 bp | CAAGTCATAGGAGGGTTTCCAGCGAACTTTGGTACTGGGCACTCCTTTATTTTTCAGGCAGGCTGCAGGTaGCCGGGCCAGAGCCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: QVIGGFPANFGTGHSFIFQAGCR*PGQSQC Trigger: GCACTGGCTCTGGCCCGGGCACCTGCAGCCTGCCTG...AAAAATAAAGGAGTGCCCAGTACCAAAGTTCGCTGGAAACCCTCCTATGACTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164685.8 |
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| CDS-3UTR GCA 90 bp | GACCACCTTTTGCTGAGATCGCCAAAACCGAACCAACCTCTCACAAAGGTACAGGAAATTCAGGCAGGCTaGAGGTGCCCGGGCCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: DHLLLRSPKPNQPLTKVQEIQAG*RCPGQS Trigger: GCTCTGGCCCGGGCACCTGCAGCCTGCCTGAATTTC...CTGTACCTTTGTGAGAGGTTGGTTCGGTTTTGGCGATCTCAGCAAAAGGTGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164685.8 |
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| 3UTR CAA 72 bp | GAAAGGGTGGGTGACCACCTTGGTGATGACCACCTTTaGCTGAGATCGCCAAAACCGAACCAACCTCTCACA | + |
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Preference number: 4 (lower is better) Translates to: ERVGDHLGDDHL*LRSPKPNQPLT Trigger: TGTGAGAGGTTGGTTCGGTTTTGGCGATCTCAGCAAAAGGTGGTCATCACCAAGGTGGTCACCCACCCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164685.8 |
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| CDS-3UTR GCA 90 bp | TTAGAACACGGTGTTTTCAGAGTCCTTGTAACTGAGATCAAACTTTGCCACAAACAGGCAGGCTGCAGGTaGCCGGGCCAGAGCCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: LEHGVFRVLVTEIKLCHKQAGCR*PGQSQC Trigger: GCACTGGCTCTGGCCCGGGCACCTGCAGCCTGCCTG...TTTGTGGCAAAGTTTGATCTCAGTTACAAGGACTCTGAAAACACCGTGTTCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS-3UTR GCA 90 bp | ACTCTCCCTATTGGTTCATATCTTTCTCTCTACTCCCAGGGGAATCAGGATACTGAAATTCAGGCAGGCTaGAGGTGCCCGGGCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TLPIGSYLSLYSQGNQDTEIQAG*RCPGQS Trigger: GCTCTGGCCCGGGCACCTGCAGCCTGCCTGAATTTC...AGTATCCTGATTCCCCTGGGAGTAGAGAGAAAGATATGAACCAATAGGGAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS-3UTR TCA 90 bp | CTGCACAGATATCTAAATTATGCTCTTCCAAACTCTCCGCAGTCTGTCCACGTAGGCCAGAGCCAGTGCTaGCCCAAGGAGTTTTCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LHRYLNYALPNSPQSVHVGQSQC*PKEFSS Trigger: ACTCGAAAACTCCTTGGGTCAGCACTGGCTCTGGCC...TACGTGGACAGACTGCGGAGAGTTTGGAAGAGCATAATTTAGATATCTGTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164685.8 |
||
| CDS-3UTR TCA 90 bp | GCCTCTGACACTTCCCTTGTGAGTGTGGTGCTTTCCTTTCTCTCCTGTTGGCTTGGTAGATATTGTAGCTaGGGAAGTTGGCATTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ASDTSLVSVVLSFLSCWLGRYCS*GSWHCS Trigger: GGAACAATGCCAACTTCCTCAGCTACAATATCTACC...AAGCCAACAGGAGAGAAAGGAAAGCACCACACTCACAAGGGAAGTGTCAGAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
||
| CDS-3UTR TCA 90 bp | GCCTCTGACACTTCCCTTGTGAGTGTGGTGCTTTCCTTTCTCTCCTGTTGGCTTAGATGCTCTGTTTACTaGGAGTTTCAGCCAAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ASDTSLVSVVLSFLSCWLRCSVY*EFQPRL Trigger: AAGCCTTGGCTGAAACTCTCAGTAAACAGAGCATCT...AAGCCAACAGGAGAGAAAGGAAAGCACCACACTCACAAGGGAAGTGTCAGAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
||
| CDS-3UTR GCA 90 bp | GAATTCCTTTTAGGGGGCCTGTGTCATTGTGATTTCCTTTCCTCCTTCTCTCCTAGGCATGCGTGTCCCTaGACAGCCAGTAGAAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: EFLLGGLCHCDFLSSFSPRHACP*TASRSR Trigger: TCTACTTCTACTGGCTGTGCAGGGACACGCATGCCT...AGGAGAGAAGGAGGAAAGGAAATCACAATGACACAGGCCCCCTAAAAGGAATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
||
| CDS-3UTR TCA 90 bp | TTTTGCCTTACCCTCTTCTGGCATGTCAAAGGGAAATGTGAAACAATGCATAACGGCCAGAGCCAGTGCTaGCCCAAGGAGTTTTCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FCLTLFWHVKGKCETMHNGQSQC*PKEFSS Trigger: ACTCGAAAACTCCTTGGGTCAGCACTGGCTCTGGCC...GTTATGCATTGTTTCACATTTCCCTTTGACATGCCAGAAGAGGGTAAGGCAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
||
| CDS-3UTR CCA 90 bp | TGGGGGCTTGGGAGCAAAAAGAAGGAAGTTCTCAAACAACAAGCACATGTGCACCAGAAATCCCGACTCTaGCATTCACACACCACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: WGLGSKKKEVLKQQAHVHQKSRL*HSHTTQ Trigger: TTGAGTGGTGTGTGAATGCCAGAGTCGGGATTTCTG...GTGCACATGTGCTTGTTGTTTGAGAACTTCCTTCTTTTTGCTCCCAAGCCCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS-3UTR CCA 90 bp | GAATTCCTTTTAGGGGGCCTGTGTCATTGTGATTTCCTTTCCTCCTTCTCTCCTACTCGTTATCCCAGTTaGGCCGTCCATACAGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: EFLLGGLCHCDFLSSFSPTRYPS*AVHTES Trigger: AGACTCTGTATGGACGGCCCAACTGGGATAACGAGT...AGGAGAGAAGGAGGAAAGGAAATCACAATGACACAGGCCCCCTAAAAGGAATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
||
| CDS-3UTR TCA 90 bp | ACTCTCCCTATTGGTTCATATCTTTCTCTCTACTCCCAGGGGAATCAGGATACTTCACCACCTCATAGCTaGACACATCTTCACTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TLPIGSYLSLYSQGNQDTSPPHS*THLHWL Trigger: CAGCCAGTGAAGATGTGTTCAGCTATGAGGTGGTGA...AGTATCCTGATTCCCCTGGGAGTAGAGAGAAAGATATGAACCAATAGGGAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
||
| CDS-3UTR GCA 90 bp | TTCTCCCACTCACCAGACTGTTCATATACAATGGCTGCAAGTATTCAAATTCCAAACCACTCAAAGGCATaGGTGTCCCTGCACAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FSHSPDCSYTMAASIQIPNHSKA*VSLHSQ Trigger: CTGGCTGTGCAGGGACACGCATGCCTTTGAGTGGTT...TGGAATTTGAATACTTGCAGCCATTGTATATGAACAGTCTGGTGAGTGGGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
||
| CDS-3UTR GCA 90 bp | CTTCTCCCACTCACCAGACTGTTCATATACAATGGCTGCAAGTATTCAAATTCCCAGCTGCAGCAGGTCTaGAAACCACTCAAAGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: LLPLTRLFIYNGCKYSNSQLQQV*KPLKGM Trigger: CATGCCTTTGAGTGGTTTGCAGACCTGCTGCAGCTG...GGAATTTGAATACTTGCAGCCATTGTATATGAACAGTCTGGTGAGTGGGAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
||
| CDS-3UTR CCA 90 bp | TGGGGGCTTGGGAGCAAAAAGAAGGAAGTTCTCAAACAACAAGCACATGTGCACCAAGCTACCATCTTATaGAAAGTGAGGTTCCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WGLGSKKKEVLKQQAHVHQATIL*KVRFLS Trigger: GGACAGGAACCTCACTTTCCATAAGATGGTAGCTTG...GTGCACATGTGCTTGTTGTTTGAGAACTTCCTTCTTTTTGCTCCCAAGCCCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
||
| CDS-3UTR CCA 90 bp | ACTCTCCCTATTGGTTCATATCTTTCTCTCTACTCCCAGGGGAATCAGGATACTATTCGTTCAGCTCCATaGATGGCAAGGCCGATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TLPIGSYLSLYSQGNQDTIRSAP*MARPMK Trigger: CTTCATCGGCCTTGCCATCCATGGAGCTGAACGAAT...AGTATCCTGATTCCCCTGGGAGTAGAGAGAAAGATATGAACCAATAGGGAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
||
| CDS-3UTR CCA 90 bp | GAATTCCTTTTAGGGGGCCTGTGTCATTGTGATTTCCTTTCCTCCTTCTCTCCTATGGTTTTGAAAGGGTaGGTGACCACCTTGGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: EFLLGGLCHCDFLSSFSPMVLKG*VTTLVM Trigger: CATCACCAAGGTGGTCACCCACCCTTTCAAAACCAT...AGGAGAGAAGGAGGAAAGGAAATCACAATGACACAGGCCCCCTAAAAGGAATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
||
| CDS-3UTR TCA 90 bp | CTGACCTTGAACACCAATTCTGCCAAACACCATGGTAAATGTAGAGTGCTACTTGGATCAGCATACAGTTaGAATTCAGGCAGGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LTLNTNSAKHHGKCRVLLGSAYS*NSGRLQ Trigger: CTGCAGCCTGCCTGAATTTCAACTGTATGCTGATCC...AAGTAGCACTCTACATTTACCATGGTGTTTGGCAGAATTGGTGTTCAAGGTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
||
| CDS-3UTR TCA 90 bp | GACCTCCGAATGGTTTTGGTAGAGGATGTGATAATCAATATGAGACACAGTGTGGGATCAGCATACAGTTaGAATTCAGGCAGGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DLRMVLVEDVIINMRHSVGSAYS*NSGRLQ Trigger: CTGCAGCCTGCCTGAATTTCAACTGTATGCTGATCC...CACACTGTGTCTCATATTGATTATCACATCCTCTACCAAAACCATTCGGAGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164685.8 |
||
| CDS-3UTR TCA 90 bp | ACTCTCCCTATTGGTTCATATCTTTCTCTCTACTCCCAGGGGAATCAGGATACTCCATCTTATGGAAAGTaGGGTTCCTGTCCAGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TLPIGSYLSLYSQGNQDTPSYGK*GSCPVV Trigger: GACAACTGGACAGGAACCTCACTTTCCATAAGATGG...AGTATCCTGATTCCCCTGGGAGTAGAGAGAAAGATATGAACCAATAGGGAGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
||
| CDS-3UTR TCA 90 bp | CAGTCATCTAGACTCTGTCTTGCATTTCTGGATGCCCATAAAATATCGGATGTGGAGCAGAGGTCAGTGTaGATGGGTGCCATTCTAACT | + |
|
Preference number: 4 (lower is better) Translates to: QSSRLCLAFLDAHKISDVEQRSV*MGAILT Trigger: AGTTAGAATGGCACCCATTCACACTGACCTCTGCTC...CACATCCGATATTTTATGGGCATCCAGAAATGCAAGACAGAGTCTAGATGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
||
| CDS-3UTR GCA 90 bp | TTTTGCCTTACCCTCTTCTGGCATGTCAAAGGGAAATGTGAAACAATGCATAACGCATTGTTCCTTTCCTaGATCTGGGTCTCCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FCLTLFWHVKGKCETMHNALFLS*IWVSSS Trigger: GCTGCTGGAGACCCAGATGCAGGAAAGGAACAATGC...GTTATGCATTGTTTCACATTTCCCTTTGACATGCCAGAAGAGGGTAAGGCAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
||
| CDS-3UTR CCA 90 bp | CAGTCATCTAGACTCTGTCTTGCATTTCTGGATGCCCATAAAATATCGGATGTGTTGTTGAAAATGAAGTaGACTCCACGCGGGCCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QSSRLCLAFLDAHKISDVLLKMK*TPRGPD Trigger: ATCCGGCCCGCGTGGAGTCCACTTCATTTTCAACAA...CACATCCGATATTTTATGGGCATCCAGAAATGCAAGACAGAGTCTAGATGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
||
| CDS-3UTR TCA 90 bp | CCCAGAAAATGCTTTTGCCTTACCCTCTTCTGGCATGTCAAAGGGAAATGTGAACACACCACTCAACGTTaGAGAGATGTGCAATTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PRKCFCLTLFWHVKGKCEHTTQR*RDVQLC Trigger: ACACAATTGCACATCTCTTCAACGTTGAGTGGTGTG...TTCACATTTCCCTTTGACATGCCAGAAGAGGGTAAGGCAAAAGCATTTTCTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
||
| CDS-3UTR TCA 90 bp | CTTCTCCCACTCACCAGACTGTTCATATACAATGGCTGCAAGTATTCAAATTCCGGATGGCAAGGCCGATaGAGAAGATCACAAAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLPLTRLFIYNGCKYSNSGWQGR*RRSQRD Trigger: ATCTCTTTGTGATCTTCTTCATCGGCCTTGCCATCC...GGAATTTGAATACTTGCAGCCATTGTATATGAACAGTCTGGTGAGTGGGAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS-3UTR TCA 90 bp | AAACAGAAGGGTAATTCTGTCTCTGGCCATACATTCCATTATGATATAGTTCTGCACAGCCACAAGCATTaGATAGCCCCTCCGTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KQKGNSVSGHTFHYDIVLHSHKH*IAPPSS Trigger: ACTGGACGGAGGGGCTATTCAATGCTTGTGGCTGTG...CAGAACTATATCATAATGGAATGTATGGCCAGAGACAGAATTACCCTTCTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
||
| CDS-3UTR TCA 90 bp | CTTCTCCCACTCACCAGACTGTTCATATACAATGGCTGCAAGTATTCAAATTCCCACTTGCAATGGTCTTaGACTCGTTATCCCAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLPLTRLFIYNGCKYSNSHLQWS*TRYPSW Trigger: CCAACTGGGATAACGAGTTCAAGACCATTGCAAGTG...GGAATTTGAATACTTGCAGCCATTGTATATGAACAGTCTGGTGAGTGGGAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS-3UTR TCA 90 bp | TTAGAACACGGTGTTTTCAGAGTCCTTGTAACTGAGATCAAACTTTGCCACAAAATGACCACCTTTTGCTaGGATCGCCAAAACCGAACC | + |
|
Preference number: 4 (lower is better) Translates to: LEHGVFRVLVTEIKLCHKMTTFC*DRQNRT Trigger: GGTTCGGTTTTGGCGATCTCAGCAAAAGGTGGTCAT...TTTGTGGCAAAGTTTGATCTCAGTTACAAGGACTCTGAAAACACCGTGTTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS-3UTR GCA 90 bp | TTTTGCCTTACCCTCTTCTGGCATGTCAAAGGGAAATGTGAAACAATGCATAACGCATCTTGGAACTCCTaGTTATCACAGCCACAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FCLTLFWHVKGKCETMHNASWNS*LSQPQA Trigger: TGCTTGTGGCTGTGATAAGCAGGAGTTCCAAGATGC...GTTATGCATTGTTTCACATTTCCCTTTGACATGCCAGAAGAGGGTAAGGCAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| 3UTR CAA 72 bp | GAGTCAGATGGCTTAGGTGTGGTTTCAACTTCTGAATaGGAAGGAAGGTGTGGAACTCATTTGAGATCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: ESDGLGVVSTSE*EGRCGTHLRSY Trigger: ATAGGATCTCAAATGAGTTCCACACCTTCCTTCCAATTCAGAAGTTGAAACCACACCTAAGCCATCTGACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS-3UTR TCA 90 bp | TTAGAACACGGTGTTTTCAGAGTCCTTGTAACTGAGATCAAACTTTGCCACAAAGTCAGAGAGAGCTATTaGATACCGGTCAGAAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: LEHGVFRVLVTEIKLCHKVRESY*IPVRNP Trigger: GGGATTTCTGACCGGTATTCAATAGCTCTCTCTGAC...TTTGTGGCAAAGTTTGATCTCAGTTACAAGGACTCTGAAAACACCGTGTTCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS-3UTR TCA 90 bp | TTTTGCCTTACCCTCTTCTGGCATGTCAAAGGGAAATGTGAAACAATGCATAACATACCTTGGGGCACTTaGCAAAAATGTACTGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FCLTLFWHVKGKCETMHNIPWGT*QKCTVP Trigger: TGGGACAGTACATTTTTGTCAAGTGCCCCAAGGTAT...GTTATGCATTGTTTCACATTTCCCTTTGACATGCCAGAAGAGGGTAAGGCAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS-3UTR GCA 90 bp | GAATTCCTTTTAGGGGGCCTGTGTCATTGTGATTTCCTTTCCTCCTTCTCTCCTCAGATATCTAAATTATaGTCTTCCAAACTCTCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: EFLLGGLCHCDFLSSFSPQISKL*SSKLSA Trigger: TGCGGAGAGTTTGGAAGAGCATAATTTAGATATCTG...AGGAGAGAAGGAGGAAAGGAAATCACAATGACACAGGCCCCCTAAAAGGAATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS-3UTR GCA 90 bp | CAGTCATCTAGACTCTGTCTTGCATTTCTGGATGCCCATAAAATATCGGATGTGGTTAGGGTGTTCACTTaGAATGGTCTTGAACTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: QSSRLCLAFLDAHKISDVVRVFT*NGLELV Trigger: AACGAGTTCAAGACCATTGCAAGTGAACACCCTAAC...CACATCCGATATTTTATGGGCATCCAGAAATGCAAGACAGAGTCTAGATGACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS-3UTR CCA 90 bp | CCTCCGAATGGTTTTGGTAGAGGATGTGATAATCAATATGAGACACAGTGTGATCAAGCTACCATCTTATaGAAAGTGAGGTTCCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PPNGFGRGCDNQYETQCDQATIL*KVRFLS Trigger: GGACAGGAACCTCACTTTCCATAAGATGGTAGCTTG...ATCACACTGTGTCTCATATTGATTATCACATCCTCTACCAAAACCATTCGGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164685.8 |
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| 3UTR CAA 72 bp | TATCTTTCTCTCTACTCCCAGGGGAATCAGGATACTTaGGTGTGTAAAAGAAACAGAAGGGTAATTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: YLSLYSQGNQDT*VCKRNRRVILS Trigger: AGACAGAATTACCCTTCTGTTTCTTTTACACACCAAAGTATCCTGATTCCCCTGGGAGTAGAGAGAAAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
||
| CDS-3UTR CCA 90 bp | TTCTCCCACTCACCAGACTGTTCATATACAATGGCTGCAAGTATTCAAATTCCAAAGATCACAAAGAGATaGTGTGTATACCAGAACACT | + |
|
Preference number: 4 (lower is better) Translates to: FSHSPDCSYTMAASIQIPKITKR*CVYQNT Trigger: AGTGTTCTGGTATACACACCATCTCTTTGTGATCTT...TGGAATTTGAATACTTGCAGCCATTGTATATGAACAGTCTGGTGAGTGGGAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| 3UTR CAA 72 bp | ATTGGAAGGAAGGTGTGGAACTCATTTGAGATCCTATaGTTTATCCTAGAGAGAGTCCCAGAAAATGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: IGRKVWNSFEIL*FILERVPENAF Trigger: AAAAGCATTTTCTGGGACTCTCTCTAGGATAAACAATAGGATCTCAAATGAGTTCCACACCTTCCTTCCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS-3UTR TCA 90 bp | AAACAGAAGGGTAATTCTGTCTCTGGCCATACATTCCATTATGATATAGTTCTGAGAAGTAGATCTTTTTaGGTTTCAGACTGGTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KQKGNSVSGHTFHYDIVLRSRSF*VSDWWH Trigger: ATGCCACCAGTCTGAAACTCAAAAAGATCTACTTCT...CAGAACTATATCATAATGGAATGTATGGCCAGAGACAGAATTACCCTTCTGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
||
| CDS TCA 90 bp | GGACTCCACGCGGGCCGGATTCTGAGTTGGAGATGCTCTGTTTACTaGGAGTTTCAGCCAAGGCTTCAGGGCCACACAGGAAAACGCCTA | + |
|
Preference number: 5 (lower is better) Translates to: GLHAGRILSWRCSVY*EFQPRLQGHTGKRL Trigger: TAGGCGTTTTCCTGTGTGGCCCTGAAGCCTTGGCTGAAACTCTCAGTAAACAGAGCATCTCCAACTCAGAATCCGGCCCGCGTGGAGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
||
| CDS GCA 90 bp | ATTGTTCCTTTCCTGCATCTGGGTCTCCAGCAGCTGCAGCAGGTCTaGAAACCACTCAAAGGCATGCGTGTCCCTGCACAGCCAGTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: IVPFLHLGLQQLQQV*KPLKGMRVPAQPVE Trigger: TTCTACTGGCTGTGCAGGGACACGCATGCCTTTGAGTGGTTTGCAGACCTGCTGCAGCTGCTGGAGACCCAGATGCAGGAAAGGAACAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
||
| CDS TCA 90 bp | GTTGAAATTCAGGCAGGCTGCAGGTGCCCGGGCCAGAGCCAGTGCTaGCCCAAGGAGTTTTCGAGTATAATTATACTTAGGCCCATCATC | + |
|
Preference number: 5 (lower is better) Translates to: VEIQAGCRCPGQSQC*PKEFSSIIILRPII Trigger: GATGATGGGCCTAAGTATAATTATACTCGAAAACTCCTTGGGTCAGCACTGGCTCTGGCCCGGGCACCTGCAGCCTGCCTGAATTTCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015484.10 ENSMUST00000164685.8 ENSMUST00000170885.2 |
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| CDS TCA 90 bp | GTTTCCAGGCATCTTGGAACTCCTGCTTATCACAGCCACAAGCATTaGATAGCCCCTCCGTCCAGTCTCCCACAATACGGATATGGATGC | + |
|
Preference number: 5 (lower is better) Translates to: VSRHLGTPAYHSHKH*IAPPSSLPQYGYGC Trigger: GCATCCATATCCGTATTGTGGGAGACTGGACGGAGGGGCTATTCAATGCTTGTGGCTGTGATAAGCAGGAGTTCCAAGATGCCTGGAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
||
| CDS GCA 90 bp | AGGGCCACACAGGAAAACGCCTATTGTGGTGTTAGGGTGTTCACTTaGAATGGTCTTGAACTCGTTATCCCAGTTGGGCCGTCCATACAG | + |
|
Preference number: 5 (lower is better) Translates to: RATQENAYCGVRVFT*NGLELVIPVGPSIQ Trigger: CTGTATGGACGGCCCAACTGGGATAACGAGTTCAAGACCATTGCAAGTGAACACCCTAACACCACAATAGGCGTTTTCCTGTGTGGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
||
| CDS TCA 90 bp | TGGCGGTGTGCAGTGCTATCATCCAAGCTACCATCTTATGGAAAGTaGGGTTCCTGTCCAGTTGTCTTCGAATCCTTGTCGAGCAACACG | + |
|
Preference number: 5 (lower is better) Translates to: WRCAVLSSKLPSYGK*GSCPVVFESLSSNT Trigger: CGTGTTGCTCGACAAGGATTCGAAGACAACTGGACAGGAACCTCACTTTCCATAAGATGGTAGCTTGGATGATAGCACTGCACACCGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
||
| CDS GCA 90 bp | AATCCCGACTCTGGCATTCACACACCACTCAACGTTGAAGAGATGTaGAATTGTGTGGATGGCGGTGTGCAGTGCTATCATCCAAGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: NPDSGIHTPLNVEEM*NCVDGGVQCYHPSY Trigger: GTAGCTTGGATGATAGCACTGCACACCGCCATCCACACAATTGCACATCTCTTCAACGTTGAGTGGTGTGTGAATGCCAGAGTCGGGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
||
| CDS CCA 90 bp | GTGTGGATGGCGGTGTGCAGTGCTATCATCCAAGCTACCATCTTATaGAAAGTGAGGTTCCTGTCCAGTTGTCTTCGAATCCTTGTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: VWMAVCSAIIQATIL*KVRFLSSCLRILVE Trigger: CTCGACAAGGATTCGAAGACAACTGGACAGGAACCTCACTTTCCATAAGATGGTAGCTTGGATGATAGCACTGCACACCGCCATCCACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
||
| CDS-3UTR CAA 90 bp | GCCTCTGACACTTCCCTTGTGAGTGTGGTGCTTTCCTTTCTCTCCTGTTGGCTTGATACCTTGGGGCACTaGACAAAAATGTACTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: ASDTSLVSVVLSFLSCWLDTLGH*TKMYCP Trigger: GGGACAGTACATTTTTGTCAAGTGCCCCAAGGTATC...AAGCCAACAGGAGAGAAAGGAAAGCACCACACTCACAAGGGAAGTGTCAGAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
||
| CDS TCA 90 bp | GTTCGGTGTGCAGTGCTATCATCCAAGCTACCATCTTATGGAAAGTaGGGTTCCTGTCCAGTTGTCTTCGAATCCTTGTCGAGCAACACG | + |
|
Preference number: 5 (lower is better) Translates to: VRCAVLSSKLPSYGK*GSCPVVFESLSSNT Trigger: CGTGTTGCTCGACAAGGATTCGAAGACAACTGGACAGGAACCTCACTTTCCATAAGATGGTAGCTTGGATGATAGCACTGCACACCGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164685.8 |
||
| CDS GCA 90 bp | CCATCAACTGCTATCTTAGGTAGTTTCCAGGCATCTTGGAACTCCTaGTTATCACAGCCACAAGCATTGAATAGCCCCTCCGTCCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PSTAILGSFQASWNS*LSQPQALNSPSVQS Trigger: AGACTGGACGGAGGGGCTATTCAATGCTTGTGGCTGTGATAAGCAGGAGTTCCAAGATGCCTGGAAACTACCTAAGATAGCAGTTGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS CCA 90 bp | CTGGCATTCACACACCACTCAACGTTGAAGAGATGTGCAATTGTGTaGATGGCGGTGTGCAGTGCTATCATCCAAGCTACCATCTTATGG | + |
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Preference number: 5 (lower is better) Translates to: LAFTHHSTLKRCAIV*MAVCSAIIQATILW Trigger: CCATAAGATGGTAGCTTGGATGATAGCACTGCACACCGCCATCCACACAATTGCACATCTCTTCAACGTTGAGTGGTGTGTGAATGCCAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS GCA 90 bp | CACCACTCAACGTTGAAGAGATGTGCAATTGTGTGGATGGCGGTGTaGAGTGCTATCATCCAAGCTACCATCTTATGGAAAGTGAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: HHSTLKRCAIVWMAV*SAIIQATILWKVRF Trigger: GAACCTCACTTTCCATAAGATGGTAGCTTGGATGATAGCACTGCACACCGCCATCCACACAATTGCACATCTCTTCAACGTTGAGTGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS-3UTR CAA 90 bp | ACTCTCCCTATTGGTTCATATCTTTCTCTCTACTCCCAGGGGAATCAGGATACTGGTGATGACCACCTTTaGCTGAGATCGCCAAAACCG | + |
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Preference number: 5 (lower is better) Translates to: TLPIGSYLSLYSQGNQDTGDDHL*LRSPKP Trigger: CGGTTTTGGCGATCTCAGCAAAAGGTGGTCATCACC...AGTATCCTGATTCCCCTGGGAGTAGAGAGAAAGATATGAACCAATAGGGAGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS-3UTR CAA 90 bp | CAAGTCATAGGAGGGTTTCCAGCGAACTTTGGTACTGGGCACTCCTTTATTTTTGAGGTTCCTGTCCAGTaGTCTTCGAATCCTTGTCGA | + |
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Preference number: 5 (lower is better) Translates to: QVIGGFPANFGTGHSFIFEVPVQ*SSNPCR Trigger: TCGACAAGGATTCGAAGACAACTGGACAGGAACCTC...AAAAATAAAGGAGTGCCCAGTACCAAAGTTCGCTGGAAACCCTCCTATGACTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164685.8 |
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| CDS-3UTR CAA 90 bp | CCCAGAAAATGCTTTTGCCTTACCCTCTTCTGGCATGTCAAAGGGAAATGTGAACTGAGGAAGTTGGCATaGTTCCTTTCCTGCATCTGG | + |
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Preference number: 5 (lower is better) Translates to: PRKCFCLTLFWHVKGKCELRKLA*FLSCIW Trigger: CCAGATGCAGGAAAGGAACAATGCCAACTTCCTCAG...TTCACATTTCCCTTTGACATGCCAGAAGAGGGTAAGGCAAAAGCATTTTCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS-3UTR CAA 90 bp | CAGTCATCTAGACTCTGTCTTGCATTTCTGGATGCCCATAAAATATCGGATGTGAACTCGTTATCCCAGTaGGGCCGTCCATACAGAGTC | + |
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Preference number: 5 (lower is better) Translates to: QSSRLCLAFLDAHKISDVNSLSQ*GRPYRV Trigger: GACTCTGTATGGACGGCCCAACTGGGATAACGAGTT...CACATCCGATATTTTATGGGCATCCAGAAATGCAAGACAGAGTCTAGATGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS-3UTR CAA 90 bp | CCCAGAAAATGCTTTTGCCTTACCCTCTTCTGGCATGTCAAAGGGAAATGTGAATGTCCCACCTCCATCTaGAATCCCTTCTTCTTCATC | + |
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Preference number: 5 (lower is better) Translates to: PRKCFCLTLFWHVKGKCECPTSI*NPFFFI Trigger: GATGAAGAAGAAGGGATTCAAGATGGAGGTGGGACA...TTCACATTTCCCTTTGACATGCCAGAAGAGGGTAAGGCAAAAGCATTTTCTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS-3UTR CAA 90 bp | CAGTCATCTAGACTCTGTCTTGCATTTCTGGATGCCCATAAAATATCGGATGTGTTGTACCAGACAGACTaGAGAATGGAGGCAAAGGGC | + |
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Preference number: 5 (lower is better) Translates to: QSSRLCLAFLDAHKISDVLYQTD*RMEAKG Trigger: GCCCTTTGCCTCCATTCTCAAGTCTGTCTGGTACAA...CACATCCGATATTTTATGGGCATCCAGAAATGCAAGACAGAGTCTAGATGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS-3UTR CAA 90 bp | TTTTGCCTTACCCTCTTCTGGCATGTCAAAGGGAAATGTGAAACAATGCATAACGAGGTTCCTGTCCAGTaGTCTTCGAATCCTTGTCGA | + |
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Preference number: 5 (lower is better) Translates to: FCLTLFWHVKGKCETMHNEVPVQ*SSNPCR Trigger: TCGACAAGGATTCGAAGACAACTGGACAGGAACCTC...GTTATGCATTGTTTCACATTTCCCTTTGACATGCCAGAAGAGGGTAAGGCAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS-3UTR CAA 90 bp | AAACAGAAGGGTAATTCTGTCTCTGGCCATACATTCCATTATGATATAGTTCTGTCACAGCCACAAGCATaGAATAGCCCCTCCGTCCAG | + |
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Preference number: 5 (lower is better) Translates to: KQKGNSVSGHTFHYDIVLSQPQA*NSPSVQ Trigger: CTGGACGGAGGGGCTATTCAATGCTTGTGGCTGTGA...CAGAACTATATCATAATGGAATGTATGGCCAGAGACAGAATTACCCTTCTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS-3UTR CAA 90 bp | CCCAGAAAATGCTTTTGCCTTACCCTCTTCTGGCATGTCAAAGGGAAATGTGAATCTAACTTGGATACCTaGGGGCACTTGACAAAAATG | + |
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Preference number: 5 (lower is better) Translates to: PRKCFCLTLFWHVKGKCESNLDT*GHLTKM Trigger: CATTTTTGTCAAGTGCCCCAAGGTATCCAAGTTAGA...TTCACATTTCCCTTTGACATGCCAGAAGAGGGTAAGGCAAAAGCATTTTCTGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS-3UTR CAA 90 bp | CTGACCTTGAACACCAATTCTGCCAAACACCATGGTAAATGTAGAGTGCTACTTTCACTTGCAATGGTCTaGAACTCGTTATCCCAGTTG | + |
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Preference number: 5 (lower is better) Translates to: LTLNTNSAKHHGKCRVLLSLAMV*NSLSQL Trigger: CAACTGGGATAACGAGTTCAAGACCATTGCAAGTGA...AAGTAGCACTCTACATTTACCATGGTGTTTGGCAGAATTGGTGTTCAAGGTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS-3UTR CAA 90 bp | TTCTCCCACTCACCAGACTGTTCATATACAATGGCTGCAAGTATTCAAATTCCAACACACCACTCAACGTaGAAGAGATGTGCAATTGTG | + |
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Preference number: 5 (lower is better) Translates to: FSHSPDCSYTMAASIQIPTHHST*KRCAIV Trigger: CACAATTGCACATCTCTTCAACGTTGAGTGGTGTGT...TGGAATTTGAATACTTGCAGCCATTGTATATGAACAGTCTGGTGAGTGGGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS TCA 72 bp | GCGGGCCGGATTCTGAGTTGGAGATGCTCTGTTTACTaGGAGTTTCAGCCAAGGCTTCAGGGCCACACAGGA | + |
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Preference number: 6 (lower is better) Translates to: AGRILSWRCSVY*EFQPRLQGHTG Trigger: TCCTGTGTGGCCCTGAAGCCTTGGCTGAAACTCTCAGTAAACAGAGCATCTCCAACTCAGAATCCGGCCCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS CAA 72 bp | GCATCTTGGAACTCCTGCTTATCACAGCCACAAGCATaGAATAGCCCCTCCGTCCAGTCTCCCACAATACGG | + |
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Preference number: 6 (lower is better) Translates to: ASWNSCLSQPQA*NSPSVQSPTIR Trigger: CCGTATTGTGGGAGACTGGACGGAGGGGCTATTCAATGCTTGTGGCTGTGATAAGCAGGAGTTCCAAGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS CAA 90 bp | TACCGGTCAGAAATCCCGACTCTGGCATTCACACACCACTCAACGTaGAAGAGATGTGCAATTGTGTGGATGGCGGTGTGCAGTGCTATC | + |
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Preference number: 6 (lower is better) Translates to: YRSEIPTLAFTHHST*KRCAIVWMAVCSAI Trigger: GATAGCACTGCACACCGCCATCCACACAATTGCACATCTCTTCAACGTTGAGTGGTGTGTGAATGCCAGAGTCGGGATTTCTGACCGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS TCA 72 bp | CATCTTGGAACTCCTGCTTATCACAGCCACAAGCATTaGATAGCCCCTCCGTCCAGTCTCCCACAATACGGA | + |
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Preference number: 6 (lower is better) Translates to: HLGTPAYHSHKH*IAPPSSLPQYG Trigger: TCCGTATTGTGGGAGACTGGACGGAGGGGCTATTCAATGCTTGTGGCTGTGATAAGCAGGAGTTCCAAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS CAA 72 bp | GAAATCCCGACTCTGGCATTCACACACCACTCAACGTaGAAGAGATGTGCAATTGTGTGGATGGCGGTGTGC | + |
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Preference number: 6 (lower is better) Translates to: EIPTLAFTHHST*KRCAIVWMAVC Trigger: GCACACCGCCATCCACACAATTGCACATCTCTTCAACGTTGAGTGGTGTGTGAATGCCAGAGTCGGGATTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS CAA 90 bp | AGTTTCCAGGCATCTTGGAACTCCTGCTTATCACAGCCACAAGCATaGAATAGCCCCTCCGTCCAGTCTCCCACAATACGGATATGGATG | + |
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Preference number: 6 (lower is better) Translates to: SFQASWNSCLSQPQA*NSPSVQSPTIRIWM Trigger: CATCCATATCCGTATTGTGGGAGACTGGACGGAGGGGCTATTCAATGCTTGTGGCTGTGATAAGCAGGAGTTCCAAGATGCCTGGAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS TCA 72 bp | GTTGAAAATGAAGTGGACTCCACGCGGGCCGGATTCTaGGTTGGAGATGCTCTGTTTACTGAGAGTTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: VENEVDSTRAGF*VGDALFTESFS Trigger: GCTGAAACTCTCAGTAAACAGAGCATCTCCAACTCAGAATCCGGCCCGCGTGGAGTCCACTTCATTTTCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS GCA 72 bp | CAGGAAAACGCCTATTGTGGTGTTAGGGTGTTCACTTaGAATGGTCTTGAACTCGTTATCCCAGTTGGGCCG | + |
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Preference number: 6 (lower is better) Translates to: QENAYCGVRVFT*NGLELVIPVGP Trigger: CGGCCCAACTGGGATAACGAGTTCAAGACCATTGCAAGTGAACACCCTAACACCACAATAGGCGTTTTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS CCA 72 bp | ACACACCACTCAACGTTGAAGAGATGTGCAATTGTGTaGATGGCGGTGTGCAGTGCTATCATCCAAGCTACC | + |
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Preference number: 6 (lower is better) Translates to: THHSTLKRCAIV*MAVCSAIIQAT Trigger: GGTAGCTTGGATGATAGCACTGCACACCGCCATCCACACAATTGCACATCTCTTCAACGTTGAGTGGTGTGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS CAA 72 bp | AAAATGAAGTGGACTCCACGCGGGCCGGATTCTGAGTaGGAGATGCTCTGTTTACTGAGAGTTTCAGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: KMKWTPRGPDSE*EMLCLLRVSAK Trigger: CTTGGCTGAAACTCTCAGTAAACAGAGCATCTCCAACTCAGAATCCGGCCCGCGTGGAGTCCACTTCATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS CAA 90 bp | TATCATCCAAGCTACCATCTTATGGAAAGTGAGGTTCCTGTCCAGTaGTCTTCGAATCCTTGTCGAGCAACACGCACTGGAACCCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: YHPSYHLMESEVPVQ*SSNPCRATRTGTPE Trigger: CTCAGGGGTTCCAGTGCGTGTTGCTCGACAAGGATTCGAAGACAACTGGACAGGAACCTCACTTTCCATAAGATGGTAGCTTGGATGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015484.10 ENSMUST00000164685.8 |
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| CDS GCA 72 bp | TCTGGCATTCACACACCACTCAACGTTGAAGAGATGTaGAATTGTGTGGATGGCGGTGTGCAGTGCTATCAT | + |
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Preference number: 6 (lower is better) Translates to: SGIHTPLNVEEM*NCVDGGVQCYH Trigger: ATGATAGCACTGCACACCGCCATCCACACAATTGCACATCTCTTCAACGTTGAGTGGTGTGTGAATGCCAGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS CCA 72 bp | GCGGTGTGCAGTGCTATCATCCAAGCTACCATCTTATaGAAAGTGAGGTTCCTGTCCAGTTGTCTTCGAATC | + |
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Preference number: 6 (lower is better) Translates to: AVCSAIIQATIL*KVRFLSSCLRI Trigger: GATTCGAAGACAACTGGACAGGAACCTCACTTTCCATAAGATGGTAGCTTGGATGATAGCACTGCACACCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS CAA 72 bp | AGCTACCATCTTATGGAAAGTGAGGTTCCTGTCCAGTaGTCTTCGAATCCTTGTCGAGCAACACGCACTGGA | + |
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Preference number: 6 (lower is better) Translates to: SYHLMESEVPVQ*SSNPCRATRTG Trigger: TCCAGTGCGTGTTGCTCGACAAGGATTCGAAGACAACTGGACAGGAACCTCACTTTCCATAAGATGGTAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015484.10 ENSMUST00000164685.8 |
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| CDS CAA 72 bp | GTCAGTGTGAATGGGTGCCATTCTAACTTGGATACCTaGGGGCACTTGACAAAAATGTACTGTCCCACCTCC | + |
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Preference number: 6 (lower is better) Translates to: VSVNGCHSNLDT*GHLTKMYCPTS Trigger: GGAGGTGGGACAGTACATTTTTGTCAAGTGCCCCAAGGTATCCAAGTTAGAATGGCACCCATTCACACTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS CAA 72 bp | CCTATTGTGGTGTTAGGGTGTTCACTTGCAATGGTCTaGAACTCGTTATCCCAGTTGGGCCGTCCATACAGA | + |
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Preference number: 6 (lower is better) Translates to: PIVVLGCSLAMV*NSLSQLGRPYR Trigger: TCTGTATGGACGGCCCAACTGGGATAACGAGTTCAAGACCATTGCAAGTGAACACCCTAACACCACAATAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS CAA 90 bp | GTGTTAGGGTGTTCACTTGCAATGGTCTTGAACTCGTTATCCCAGTaGGGCCGTCCATACAGAGTCTTCTGTTTTAGGCCTGTGATCACA | + |
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Preference number: 6 (lower is better) Translates to: VLGCSLAMVLNSLSQ*GRPYRVFCFRPVIT Trigger: TGTGATCACAGGCCTAAAACAGAAGACTCTGTATGGACGGCCCAACTGGGATAACGAGTTCAAGACCATTGCAAGTGAACACCCTAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS CAA 90 bp | GTCAGTGTGAATGGGTGCCATTCTAACTTGGATACCTTGGGGCACTaGACAAAAATGTACTGTCCCACCTCCATCTTGAATCCCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: VSVNGCHSNLDTLGH*TKMYCPTSILNPFF Trigger: GAAGAAGGGATTCAAGATGGAGGTGGGACAGTACATTTTTGTCAAGTGCCCCAAGGTATCCAAGTTAGAATGGCACCCATTCACACTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS TCA 72 bp | GCAGTGCTATCATCCAAGCTACCATCTTATGGAAAGTaGGGTTCCTGTCCAGTTGTCTTCGAATCCTTGTCG | + |
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Preference number: 6 (lower is better) Translates to: AVLSSKLPSYGK*GSCPVVFESLS Trigger: CGACAAGGATTCGAAGACAACTGGACAGGAACCTCACTTTCCATAAGATGGTAGCTTGGATGATAGCACTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015484.10 ENSMUST00000164685.8 |
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| CDS TCA 72 bp | TTCGTTCTCATTGTCACCGATGTCAGAGAGAGCTATTaGATACCGGTCAGAAATCCCGACTCTGGCATTCAC | + |
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Preference number: 6 (lower is better) Translates to: FVLIVTDVRESY*IPVRNPDSGIH Trigger: GTGAATGCCAGAGTCGGGATTTCTGACCGGTATTCAATAGCTCTCTCTGACATCGGTGACAATGAGAACGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS CCA 72 bp | TCGGTGTGCAGTGCTATCATCCAAGCTACCATCTTATaGAAAGTGAGGTTCCTGTCCAGTTGTCTTCGAATC | + |
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Preference number: 6 (lower is better) Translates to: SVCSAIIQATIL*KVRFLSSCLRI Trigger: GATTCGAAGACAACTGGACAGGAACCTCACTTTCCATAAGATGGTAGCTTGGATGATAGCACTGCACACCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164685.8 |
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| CDS CAA 72 bp | TGTTCACTTGCAATGGTCTTGAACTCGTTATCCCAGTaGGGCCGTCCATACAGAGTCTTCTGTTTTAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: CSLAMVLNSLSQ*GRPYRVFCFRP Trigger: AGGCCTAAAACAGAAGACTCTGTATGGACGGCCCAACTGGGATAACGAGTTCAAGACCATTGCAAGTGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS CAA 72 bp | TTTTTGAGTTTCAGACTGGTGGCATTATCACAATATTaGTACCAGACAGACTTGAGAATGGAGGCAAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: FLSFRLVALSQY*YQTDLRMEAKG Trigger: GCCCTTTGCCTCCATTCTCAAGTCTGTCTGGTACAAATATTGTGATAATGCCACCAGTCTGAAACTCAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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| CDS CAA 72 bp | TTTTCTCTAGCAAAATTGAGATACTCTTCGTTCTCATaGTCACCGATGTCAGAGAGAGCTATTGAATACCGG | + |
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Preference number: 6 (lower is better) Translates to: FSLAKLRYSSFS*SPMSERAIEYR Trigger: CCGGTATTCAATAGCTCTCTCTGACATCGGTGACAATGAGAACGAAGAGTATCTCAATTTTGCTAGAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015484.10 |
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