Pregenerated sensors for CYBA (Mus musculus)

Ensembl gene IDs: ENSMUSG00000006519

Ensembl transcript IDs: ENSMUST00000017604.10, ENSMUST00000212600.2

Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	AATGGCCAAGCAGACGGTCCCCAGGATGGTGGCCAGGAGGAAGCCTaGAGGCACCGACAACAGGAAGTGGAGGGCAGCCCGGACGTAGTA	+
Preference number: 5 (lower is better) Translates to: NGQADGPQDGGQEEA*RHRQQEVEGSPDVV Trigger: TACTACGTCCGGGCTGCCCTCCACTTCCTGTTGTCGGTGCCTGCAGGCTTCCTCCTGGCCACCATCCTGGGGACCGTCTGCTTGGCCATT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017604.10
CDS CCA 90 bp	TTCACCCTCACTCGGCTTCTTTCGGACCTCTGCGGGTGGCCGGGGTaGGGGGTTGGTAGGTGGTTGCTTGATGGTGCCTCCAACCTGTGG	+
Preference number: 5 (lower is better) Translates to: FTLTRLLSDLCGWPG*GVGRWLLDGASNLW Trigger: CCACAGGTTGGAGGCACCATCAAGCAACCACCTACCAACCCCCCACCCCGGCCACCCGCAGAGGTCCGAAAGAAGCCGAGTGAGGGTGAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017604.10 ENSMUST00000212600.2
CDS CCA 90 bp	ACTGCTCACCTCGGATGGCTGCCAGCAGATAGATCACACTGGCAATaGCCAAGCAGACGGTCCCCAGGATGGTGGCCAGGAGGAAGCCTG	+
Preference number: 5 (lower is better) Translates to: TAHLGWLPADRSHWQ*PSRRSPGWWPGGSL Trigger: CAGGCTTCCTCCTGGCCACCATCCTGGGGACCGTCTGCTTGGCCATTGCCAGTGTGATCTATCTGCTGGCAGCCATCCGAGGTGAGCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017604.10 ENSMUST00000212600.2
CDS CCA 90 bp	GAGTCCACTGCTCACCTCGGATGGCTGCCAGCAGATAGATCACACTaGCAATGGCCAAGCAGACGGTCCCCAGGATGGTGGCCAGGAGGA	+
Preference number: 5 (lower is better) Translates to: ESTAHLGWLPADRSH*QWPSRRSPGWWPGG Trigger: TCCTCCTGGCCACCATCCTGGGGACCGTCTGCTTGGCCATTGCCAGTGTGATCTATCTGCTGGCAGCCATCCGAGGTGAGCAGTGGACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017604.10 ENSMUST00000212600.2
CDS CCA 90 bp	GATAGATCACACTGGCAATGGCCAAGCAGACGGTCCCCAGGATGGTaGCCAGGAGGAAGCCTGCAGGCACCGACAACCATCGCTCCATGG	+
Preference number: 5 (lower is better) Translates to: DRSHWQWPSRRSPGW*PGGSLQAPTTIAPW Trigger: CCATGGAGCGATGGTTGTCGGTGCCTGCAGGCTTCCTCCTGGCCACCATCCTGGGGACCGTCTGCTTGGCCATTGCCAGTGTGATCTATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212600.2
CDS TCA 90 bp	CCGACAACAGGAAGTGGAGGGCAGCCCGGACGTAGTAATTCCTGGTaGGGGGCCCGAAAAGCTTCACCACAGAGGTCAGGTACTTCTGTC	+
Preference number: 5 (lower is better) Translates to: PTTGSGGQPGRSNSW*GARKASPQRSGTSV Trigger: GACAGAAGTACCTGACCTCTGTGGTGAAGCTTTTCGGGCCCCTCACCAGGAATTACTACGTCCGGGCTGCCCTCCACTTCCTGTTGTCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017604.10
CDS GCA 90 bp	CTTGGGTTTAGGCTCAATGGGAGTCCACTGCTCACCTCGGATGGCTaGCAGCAGATAGATCACACTGGCAATGGCCAAGCAGACGGTCCC	+
Preference number: 5 (lower is better) Translates to: LGFRLNGSPLLTSDG*QQIDHTGNGQADGP Trigger: GGGACCGTCTGCTTGGCCATTGCCAGTGTGATCTATCTGCTGGCAGCCATCCGAGGTGAGCAGTGGACTCCCATTGAGCCTAAACCCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017604.10 ENSMUST00000212600.2
CDS GCA 90 bp	TTTCCTCTTTCCCCGGGGATACTCCAGCAGACAGATGAGCACACCTaGAGCGATAGAGTAGGCGCCGAAATACCACTGTGTGAAACGTCC	+
Preference number: 5 (lower is better) Translates to: FPLSPGILQQTDEHT*SDRVGAEIPLCETS Trigger: GGACGTTTCACACAGTGGTATTTCGGCGCCTACTCTATCGCTGCAGGTGTGCTCATCTGTCTGCTGGAGTATCCCCGGGGAAAGAGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017604.10 ENSMUST00000212600.2
CDS GCA 72 bp	GCAGACGGTCCCCAGGATGGTGGCCAGGAGGAAGCCTaGAGGCACCGACAACAGGAAGTGGAGGGCAGCCCG	+
Preference number: 6 (lower is better) Translates to: ADGPQDGGQEEA*RHRQQEVEGSP Trigger: CGGGCTGCCCTCCACTTCCTGTTGTCGGTGCCTGCAGGCTTCCTCCTGGCCACCATCCTGGGGACCGTCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017604.10
CDS GCA 72 bp	GCAGACGGTCCCCAGGATGGTGGCCAGGAGGAAGCCTaGAGGCACCGACAACCATCGCTCCATGGTGGACCC	+
Preference number: 6 (lower is better) Translates to: ADGPQDGGQEEA*RHRQPSLHGGP Trigger: GGGTCCACCATGGAGCGATGGTTGTCGGTGCCTGCAGGCTTCCTCCTGGCCACCATCCTGGGGACCGTCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212600.2
CDS CCA 72 bp	ACTCGGCTTCTTTCGGACCTCTGCGGGTGGCCGGGGTaGGGGGTTGGTAGGTGGTTGCTTGATGGTGCCTCC	+
Preference number: 6 (lower is better) Translates to: TRLLSDLCGWPG*GVGRWLLDGAS Trigger: GGAGGCACCATCAAGCAACCACCTACCAACCCCCCACCCCGGCCACCCGCAGAGGTCCGAAAGAAGCCGAGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017604.10 ENSMUST00000212600.2
CDS CCA 72 bp	CTCGGATGGCTGCCAGCAGATAGATCACACTGGCAATaGCCAAGCAGACGGTCCCCAGGATGGTGGCCAGGA	+
Preference number: 6 (lower is better) Translates to: LGWLPADRSHWQ*PSRRSPGWWPG Trigger: TCCTGGCCACCATCCTGGGGACCGTCTGCTTGGCCATTGCCAGTGTGATCTATCTGCTGGCAGCCATCCGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017604.10 ENSMUST00000212600.2
CDS CCA 72 bp	GCTCACCTCGGATGGCTGCCAGCAGATAGATCACACTaGCAATGGCCAAGCAGACGGTCCCCAGGATGGTGG	+
Preference number: 6 (lower is better) Translates to: AHLGWLPADRSH*QWPSRRSPGWW Trigger: CCACCATCCTGGGGACCGTCTGCTTGGCCATTGCCAGTGTGATCTATCTGCTGGCAGCCATCCGAGGTGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017604.10 ENSMUST00000212600.2
CDS TCA 72 bp	GGAAGTGGAGGGCAGCCCGGACGTAGTAATTCCTGGTaGGGGGCCCGAAAAGCTTCACCACAGAGGTCAGGT	+
Preference number: 6 (lower is better) Translates to: GSGGQPGRSNSW*GARKASPQRSG Trigger: ACCTGACCTCTGTGGTGAAGCTTTTCGGGCCCCTCACCAGGAATTACTACGTCCGGGCTGCCCTCCACTTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017604.10
CDS CAA 90 bp	TTGGTAGGTGGTTGCTTGATGGTGCCTCCAACCTGTGGCCGCTCCTaGGGTTTAGGCTCAATGGGAGTCCACTGCTCACCTCGGATGGCT	+
Preference number: 6 (lower is better) Translates to: LVGGCLMVPPTCGRS*GLGSMGVHCSPRMA Trigger: AGCCATCCGAGGTGAGCAGTGGACTCCCATTGAGCCTAAACCCAAGGAGCGGCCACAGGTTGGAGGCACCATCAAGCAACCACCTACCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017604.10 ENSMUST00000212600.2
CDS TCA 72 bp	TGTCACTGGCATTGGGTTAACCTGGGGTCCTCCAGCTaGGGCTGCCTCCTCTTCACCCTCACTCGGCTTCTT	+
Preference number: 6 (lower is better) Translates to: CHWHWVNLGSSS*GCLLFTLTRLL Trigger: AAGAAGCCGAGTGAGGGTGAAGAGGAGGCAGCCTCAGCTGGAGGACCCCAGGTTAACCCAATGCCAGTGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017604.10 ENSMUST00000212600.2
CDS CAA 72 bp	GGTTGCTTGATGGTGCCTCCAACCTGTGGCCGCTCCTaGGGTTTAGGCTCAATGGGAGTCCACTGCTCACCT	+
Preference number: 6 (lower is better) Translates to: GCLMVPPTCGRS*GLGSMGVHCSP Trigger: AGGTGAGCAGTGGACTCCCATTGAGCCTAAACCCAAGGAGCGGCCACAGGTTGGAGGCACCATCAAGCAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017604.10 ENSMUST00000212600.2
CDS CCA 72 bp	GTTGGTAGGTGGTTGCTTGATGGTGCCTCCAACCTGTaGCCGCTCCTTGGGTTTAGGCTCAATGGGAGTCCA	+
Preference number: 6 (lower is better) Translates to: VGRWLLDGASNL*PLLGFRLNGSP Trigger: TGGACTCCCATTGAGCCTAAACCCAAGGAGCGGCCACAGGTTGGAGGCACCATCAAGCAACCACCTACCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017604.10 ENSMUST00000212600.2

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