Pregenerated sensors for CYB5R4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032872Ensembl transcript IDs: ENSMUST00000168529.9, ENSMUST00000174294.3
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAACTTGCAGTTCATAACAAAGGCTCCCATATGCACCTGCTGCCATaGCTGACCCTCCAGGTCAGGGTCAGCAGTAAGATAAGTCACGGT | + |
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Preference number: 1 (lower is better) Translates to: KLAVHNKGSHMHLLP*LTLQVRVSSKISHG Trigger: ACCGTGACTTATCTTACTGCTGACCCTGACCTGGAGGGTCAGTCATGGCAGCAGGTGCATATGGGAGCCTTTGTTATGAACTGCAAGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168529.9 ENSMUST00000174294.3 |
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| 3UTR-3UTR TCA 90 bp | ACAACTTCAGTGGTCAGGAAACTTGCAGTTCATAACAAAGGCTCCCATATGCACACCTGCTGCCATGACTaGCCCTCCAGGTCAGGGTCA | + |
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Preference number: 2 (lower is better) Translates to: TTSVVRKLAVHNKGSHMHTCCHD*PSRSGS Trigger: TGACCCTGACCTGGAGGGTCAGTCATGGCAGCAGGT...GTGCATATGGGAGCCTTTGTTATGAACTGCAAGTTTCCTGACCACTGAAGTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168529.9 ENSMUST00000174294.3 |
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| 3UTR-3UTR TCA 90 bp | CGAACAGTGATACAACTTCAGTGGTCAGGAAACTTGCAGTTCATAACAAAGGCTACCTGCTGCCATGACTaGCCCTCCAGGTCAGGGTCA | + |
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Preference number: 2 (lower is better) Translates to: RTVIQLQWSGNLQFITKATCCHD*PSRSGS Trigger: TGACCCTGACCTGGAGGGTCAGTCATGGCAGCAGGT...AGCCTTTGTTATGAACTGCAAGTTTCCTGACCACTGAAGTTGTATCACTGTTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168529.9 ENSMUST00000174294.3 |
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| 3UTR CAA 90 bp | AGTGTTGACTGCCGAACAGTGATACAACTTCAGTGGTCAGGAAACTaGCAGTTCATAACAAAGGCTCCCATATGCACCTGCTGCCATGAC | + |
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Preference number: 2 (lower is better) Translates to: SVDCRTVIQLQWSGN*QFITKAPICTCCHD Trigger: GTCATGGCAGCAGGTGCATATGGGAGCCTTTGTTATGAACTGCAAGTTTCCTGACCACTGAAGTTGTATCACTGTTCGGCAGTCAACACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168529.9 ENSMUST00000174294.3 |
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| 3UTR-3UTR TCA 90 bp | AAAACTGGACCACCAATAGTTACAGCATTCCAAGTTTTAAGACTACTAAGGACAATGCACCTGCTGCCATaGCTGACCCTCCAGGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: KTGPPIVTAFQVLRLLRTMHLLP*LTLQVR Trigger: CCTGACCTGGAGGGTCAGTCATGGCAGCAGGTGCAT...TGTCCTTAGTAGTCTTAAAACTTGGAATGCTGTAACTATTGGTGGTCCAGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168529.9 ENSMUST00000174294.3 |
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| 3UTR-3UTR TCA 90 bp | CAACCACTGTATTTGTTACCTTCAGCCACACGTCCACCACAGGGAGTAAAAAGTCCATCAATTCCTGAGTaGACAGTGCAGTGGAATATT | + |
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Preference number: 2 (lower is better) Translates to: QPLYLLPSATRPPQGVKSPSIPE*TVQWNI Trigger: AATATTCCACTGCACTGTTCACTCAGGAATTGATGG...ACTTTTTACTCCCTGTGGTGGACGTGTGGCTGAAGGTAACAAATACAGTGGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| 3UTR-3UTR GCA 90 bp | CTGACCCTCCAGGTCAGGGTCAGCAGTAAGATAAGTCACGGTACAAAATTAAACGAAAAGTTAAGATCATaGAGCAACCTTATCCCCTCG | + |
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Preference number: 2 (lower is better) Translates to: LTLQVRVSSKISHGTKLNEKLRS*SNLIPS Trigger: CGAGGGGATAAGGTTGCTGCATGATCTTAACTTTTC...GTTTAATTTTGTACCGTGACTTATCTTACTGCTGACCCTGACCTGGAGGGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174294.3 |
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| 3UTR-3UTR CCA 90 bp | CAACCACTGTATTTGTTACCTTCAGCCACACGTCCACCACAGGGAGTAAAAAGTTCCAGTTCACAAAACTaGACCACCAATAGTTACAGC | + |
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Preference number: 2 (lower is better) Translates to: QPLYLLPSATRPPQGVKSSSSQN*TTNSYS Trigger: GCTGTAACTATTGGTGGTCCAGTTTTGTGAACTGGA...ACTTTTTACTCCCTGTGGTGGACGTGTGGCTGAAGGTAACAAATACAGTGGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| 3UTR-3UTR CCA 90 bp | ACCCTCCAGGTCAGGGTCAGCAGTAAGATAAGTCACGGTACAAAATTAAACCAATTGAATAAAAGACAATaGCAGCTTTTTCTTAAGCGG | + |
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Preference number: 2 (lower is better) Translates to: TLQVRVSSKISHGTKLNQLNKRQ*QLFLKR Trigger: CCGCTTAAGAAAAAGCTGCCATTGTCTTTTATTCAA...TTGGTTTAATTTTGTACCGTGACTTATCTTACTGCTGACCCTGACCTGGAGGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000174294.3 |
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| 3UTR-3UTR TCA 90 bp | AAAACTGGACCACCAATAGTTACAGCATTCCAAGTTTTAAGACTACTAAGGACACCATCAATTCCTGAGTaGACAGTGCAGTGGAATATT | + |
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Preference number: 2 (lower is better) Translates to: KTGPPIVTAFQVLRLLRTPSIPE*TVQWNI Trigger: AATATTCCACTGCACTGTTCACTCAGGAATTGATGG...TGTCCTTAGTAGTCTTAAAACTTGGAATGCTGTAACTATTGGTGGTCCAGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168529.9 ENSMUST00000174294.3 |
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| 3UTR-3UTR CCA 90 bp | CCAATAGTTACAGCATTCCAAGTTTTAAGACTACTAAGGACATACACCATCAATGTGATACAACTTCAGTaGTCAGGAAACTTGCAGTTC | + |
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Preference number: 2 (lower is better) Translates to: PIVTAFQVLRLLRTYTINVIQLQ*SGNLQF Trigger: GAACTGCAAGTTTCCTGACCACTGAAGTTGTATCAC...ATTGATGGTGTATGTCCTTAGTAGTCTTAAAACTTGGAATGCTGTAACTATTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168529.9 ENSMUST00000174294.3 |
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| 3UTR TCA 72 bp | GTTCATAACAAAGGCTCCCATATGCACCTGCTGCCATaGCTGACCCTCCAGGTCAGGGTCAGCAGTAAGATA | + |
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Preference number: 3 (lower is better) Translates to: VHNKGSHMHLLP*LTLQVRVSSKI Trigger: TATCTTACTGCTGACCCTGACCTGGAGGGTCAGTCATGGCAGCAGGTGCATATGGGAGCCTTTGTTATGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168529.9 ENSMUST00000174294.3 |
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| 3UTR CCA 72 bp | ACAAGTGTTGACTGCCGAACAGTGATACAACTTCAGTaGTCAGGAAACTTGCAGTTCATAACAAAGGCTCCC | + |
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Preference number: 3 (lower is better) Translates to: TSVDCRTVIQLQ*SGNLQFITKAP Trigger: GGGAGCCTTTGTTATGAACTGCAAGTTTCCTGACCACTGAAGTTGTATCACTGTTCGGCAGTCAACACTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168529.9 ENSMUST00000174294.3 |
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| 3UTR-3UTR CAA 90 bp | ACAACTTCAGTGGTCAGGAAACTTGCAGTTCATAACAAAGGCTCCCATATGCACCAGTGGTCAGGAAACTaGCAGTTCATAACAAAGGCT | + |
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Preference number: 3 (lower is better) Translates to: TTSVVRKLAVHNKGSHMHQWSGN*QFITKA Trigger: AGCCTTTGTTATGAACTGCAAGTTTCCTGACCACTG...GTGCATATGGGAGCCTTTGTTATGAACTGCAAGTTTCCTGACCACTGAAGTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168529.9 ENSMUST00000174294.3 |
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| 3UTR CCA 72 bp | ATTCTAGAGATTATATTTCTTTACTGTCCGTGTTTGTaGGCTGGTGCACTGCCACAGTGTGCACGTGAGAAT | + |
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Preference number: 3 (lower is better) Translates to: ILEIIFLYCPCL*AGALPQCAREN Trigger: ATTCTCACGTGCACACTGTGGCAGTGCACCAGCCCACAAACACGGACAGTAAAGAAATATAATCTCTAGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| 3UTR-3UTR CAA 90 bp | CCAATAGTTACAGCATTCCAAGTTTTAAGACTACTAAGGACATACACCATCAATCAGTGGTCAGGAAACTaGCAGTTCATAACAAAGGCT | + |
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Preference number: 3 (lower is better) Translates to: PIVTAFQVLRLLRTYTINQWSGN*QFITKA Trigger: AGCCTTTGTTATGAACTGCAAGTTTCCTGACCACTG...ATTGATGGTGTATGTCCTTAGTAGTCTTAAAACTTGGAATGCTGTAACTATTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168529.9 ENSMUST00000174294.3 |
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| 3UTR TCA 72 bp | GATTGCTTAGTTTATCATGTCATAAAATACAAGTGTTaGCTGCCGAACAGTGATACAACTTCAGTGGTCAGG | + |
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Preference number: 3 (lower is better) Translates to: DCLVYHVIKYKC*LPNSDTTSVVR Trigger: CCTGACCACTGAAGTTGTATCACTGTTCGGCAGTCAACACTTGTATTTTATGACATGATAAACTAAGCAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168529.9 ENSMUST00000174294.3 |
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| CDS-3UTR CCA 90 bp | AGTGATACAACTTCAGTGGTCAGGAAACTTGCAGTTCATAACAAAGGCTCCCATGAGGAGACGCGCTGCTaGGAGCCGGGGGCCGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: SDTTSVVRKLAVHNKGSHEETRC*EPGAGK Trigger: TTTCCCGGCCCCCGGCTCCCAGCAGCGCGTCTCCTC...ATGGGAGCCTTTGTTATGAACTGCAAGTTTCCTGACCACTGAAGTTGTATCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS-3UTR CCA 90 bp | TTTTATTCTATCTGTCCAGTTCACAAAACTGGACCACCAATAGTTACAGCATTCACCTTGCTGCGCCCCTaGGAGGAGACGCGCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: FYSICPVHKTGPPIVTAFTLLRP*EETRCW Trigger: CCAGCAGCGCGTCTCCTCCCAGGGGCGCAGCAAGGT...GAATGCTGTAACTATTGGTGGTCCAGTTTTGTGAACTGGACAGATAGAATAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS-3UTR GCA 90 bp | AATAAAACTCCCTTTAAGACAACCACTGTATTTGTTACCTTCAGCCACACGTCCTTAAAGGTACCTTGCTaGGCCCCTGGGAGGAGACGC | + |
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Preference number: 4 (lower is better) Translates to: NKTPFKTTTVFVTFSHTSLKVPC*APGRRR Trigger: GCGTCTCCTCCCAGGGGCGCAGCAAGGTACCTTTAA...GGACGTGTGGCTGAAGGTAACAAATACAGTGGTTGTCTTAAAGGGAGTTTTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS-3UTR CCA 90 bp | ACTCCCTTTAAGACAACCACTGTATTTGTTACCTTCAGCCACACGTCCACCACAAAGACGATCAAGCTCTaGTGTGAAGAGTCCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: TPFKTTTVFVTFSHTSTTKTIKL*CEESSR Trigger: CCTGCTGGACTCTTCACACCAGAGCTTGATCGTCTT...TGTGGTGGACGTGTGGCTGAAGGTAACAAATACAGTGGTTGTCTTAAAGGGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS-3UTR TCA 90 bp | GTGGTCAGGAAACTTGCAGTTCATAACAAAGGCTCCCATATGCACCTGCTGCCAACTCTCTTTCCTTCATaGCAGTCTTTTGGAACAGCA | + |
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Preference number: 4 (lower is better) Translates to: VVRKLAVHNKGSHMHLLPTLFPS*QSFGTA Trigger: TGCTGTTCCAAAAGACTGTCATGAAGGAAAGAGAGT...TGGCAGCAGGTGCATATGGGAGCCTTTGTTATGAACTGCAAGTTTCCTGACCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS-3UTR GCA 90 bp | GTGGTCAGGAAACTTGCAGTTCATAACAAAGGCTCCCATATGCACCTGCTGCCAGAAAAGTTAAGATCATaGAGCAACCTTATCCCCTCG | + |
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Preference number: 4 (lower is better) Translates to: VVRKLAVHNKGSHMHLLPEKLRS*SNLIPS Trigger: CGAGGGGATAAGGTTGCTGCATGATCTTAACTTTTC...TGGCAGCAGGTGCATATGGGAGCCTTTGTTATGAACTGCAAGTTTCCTGACCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| 3UTR CAA 72 bp | TGCCGAACAGTGATACAACTTCAGTGGTCAGGAAACTaGCAGTTCATAACAAAGGCTCCCATATGCACCTGC | + |
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Preference number: 4 (lower is better) Translates to: CRTVIQLQWSGN*QFITKAPICTC Trigger: GCAGGTGCATATGGGAGCCTTTGTTATGAACTGCAAGTTTCCTGACCACTGAAGTTGTATCACTGTTCGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168529.9 ENSMUST00000174294.3 |
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| CDS-3UTR TCA 90 bp | GTGGTCAGGAAACTTGCAGTTCATAACAAAGGCTCCCATATGCACCTGCTGCCAAAAAGTCTCGTGTCATaGGTGACATCTTCCTTAGAT | + |
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Preference number: 4 (lower is better) Translates to: VVRKLAVHNKGSHMHLLPKSLVS*VTSSLD Trigger: ATCTAAGGAAGATGTCACTCATGACACGAGACTTTT...TGGCAGCAGGTGCATATGGGAGCCTTTGTTATGAACTGCAAGTTTCCTGACCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS-3UTR GCA 90 bp | CTGACCCTCCAGGTCAGGGTCAGCAGTAAGATAAGTCACGGTACAAAATTAAACGGCTCTTGGGAAGCATaGCATTTAAGACTCTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: LTLQVRVSSKISHGTKLNGSWEA*HLRLSF Trigger: GAAAGAGAGTCTTAAATGGCATGCTTCCCAAGAGCC...GTTTAATTTTGTACCGTGACTTATCTTACTGCTGACCCTGACCTGGAGGGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| 3UTR CAA 72 bp | AACATTCTAGAGATTATATTTCTTTACTGTCCGTGTTaGTGGGCTGGTGCACTGCCACAGTGTGCACGTGAG | + |
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Preference number: 4 (lower is better) Translates to: NILEIIFLYCPC*WAGALPQCARE Trigger: CTCACGTGCACACTGTGGCAGTGCACCAGCCCACAAACACGGACAGTAAAGAAATATAATCTCTAGAATGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS-3UTR TCA 90 bp | ACAACTTCAGTGGTCAGGAAACTTGCAGTTCATAACAAAGGCTCCCATATGCACACTCCATATAAGGGCTaGCGTTGTAAACAAACCCTC | + |
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Preference number: 4 (lower is better) Translates to: TTSVVRKLAVHNKGSHMHTPYKG*RCKQTL Trigger: GAGGGTTTGTTTACAACGTCAGCCCTTATATGGAGT...GTGCATATGGGAGCCTTTGTTATGAACTGCAAGTTTCCTGACCACTGAAGTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS-3UTR TCA 90 bp | TTTTATTCTATCTGTCCAGTTCACAAAACTGGACCACCAATAGTTACAGCATTCCCTGGGCAGTGTGTCTaGCATTTGGCTCTTGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: FYSICPVHKTGPPIVTAFPGQCV*HLALGK Trigger: CTTCCCAAGAGCCAAATGTCAGACACACTGCCCAGG...GAATGCTGTAACTATTGGTGGTCCAGTTTTGTGAACTGGACAGATAGAATAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS-3UTR GCA 90 bp | ACTCCCTTTAAGACAACCACTGTATTTGTTACCTTCAGCCACACGTCCACCACAATATGTGTCCCTGTTTaGCATTCCATTCTGGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: TPFKTTTVFVTFSHTSTTICVPV*HSILEK Trigger: CTTCTCCAGAATGGAATGGCAAACAGGGACACATAT...TGTGGTGGACGTGTGGCTGAAGGTAACAAATACAGTGGTTGTCTTAAAGGGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS-3UTR CCA 90 bp | ACTCCCTTTAAGACAACCACTGTATTTGTTACCTTCAGCCACACGTCCACCACACTGACATTTGGCTCTTaGGAAGCATGCCATTTAAGA | + |
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Preference number: 4 (lower is better) Translates to: TPFKTTTVFVTFSHTSTTLTFGS*EACHLR Trigger: TCTTAAATGGCATGCTTCCCAAGAGCCAAATGTCAG...TGTGGTGGACGTGTGGCTGAAGGTAACAAATACAGTGGTTGTCTTAAAGGGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS-3UTR CCA 90 bp | ACAACTTCAGTGGTCAGGAAACTTGCAGTTCATAACAAAGGCTCCCATATGCACAACATGTTGTCCAACTaGCACCTGAAGGTGAGTACT | + |
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Preference number: 4 (lower is better) Translates to: TTSVVRKLAVHNKGSHMHNMLSN*HLKVST Trigger: AGTACTCACCTTCAGGTGCCAGTTGGACAACATGTT...GTGCATATGGGAGCCTTTGTTATGAACTGCAAGTTTCCTGACCACTGAAGTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS-3UTR TCA 90 bp | ACCCTCCAGGTCAGGGTCAGCAGTAAGATAAGTCACGGTACAAAATTAAACCAATACAACAATGGTGACTaGAGACTCTGTTTGGAACCA | + |
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Preference number: 4 (lower is better) Translates to: TLQVRVSSKISHGTKLNQYNNGD*RLCLEP Trigger: TGGTTCCAAACAGAGTCTTCAGTCACCATTGTTGTA...TTGGTTTAATTTTGTACCGTGACTTATCTTACTGCTGACCCTGACCTGGAGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS-3UTR TCA 90 bp | GTGTCTTTAAAAACTCCTTTAAGCTCAAGAATGGTAGCACATACCTGTAATCCCAGAGAGAAGAGCTCGTaGTATGTGTCCCTGTTTGCC | + |
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Preference number: 4 (lower is better) Translates to: VSLKTPLSSRMVAHTCNPREKSS*YVSLFA Trigger: GGCAAACAGGGACACATATCACGAGCTCTTCTCTCT...GGGATTACAGGTATGTGCTACCATTCTTGAGCTTAAAGGAGTTTTTAAAGACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS-3UTR TCA 90 bp | ATAAAAGACAATGGCAGCTTTTTCTTAAGCGGTGAATCCGTGAATCTCATCATCAGAGAGAAGAGCTCGTaGTATGTGTCCCTGTTTGCC | + |
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Preference number: 4 (lower is better) Translates to: IKDNGSFFLSGESVNLIIREKSS*YVSLFA Trigger: GGCAAACAGGGACACATATCACGAGCTCTTCTCTCT...GATGATGAGATTCACGGATTCACCGCTTAAGAAAAAGCTGCCATTGTCTTTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174294.3 |
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| CDS-3UTR GCA 90 bp | GTGGTCAGGAAACTTGCAGTTCATAACAAAGGCTCCCATATGCACCTGCTGCCATCTTCTTTCTTGTTGTaGTTCTTAAGCTCTTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: VVRKLAVHNKGSHMHLLPSSFLL*FLSSSS Trigger: TGAAGAAGAGCTTAAGAAGCACAACAAGAAAGAAGA...TGGCAGCAGGTGCATATGGGAGCCTTTGTTATGAACTGCAAGTTTCCTGACCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS-3UTR GCA 90 bp | ACAACTTCAGTGGTCAGGAAACTTGCAGTTCATAACAAAGGCTCCCATATGCACTGGCTTTACTATTTCTaGACCTGTGACACTGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: TTSVVRKLAVHNKGSHMHWLYYF*TCDTEL Trigger: AAGCTCAGTGTCACAGGTGCAGAAATAGTAAAGCCA...GTGCATATGGGAGCCTTTGTTATGAACTGCAAGTTTCCTGACCACTGAAGTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS-3UTR CCA 90 bp | CGAACAGTGATACAACTTCAGTGGTCAGGAAACTTGCAGTTCATAACAAAGGCTTTCATGACAGTCTTTTaGAACAGCAGGCTTCACAGC | + |
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Preference number: 4 (lower is better) Translates to: RTVIQLQWSGNLQFITKAFMTVF*NSRLHS Trigger: GCTGTGAAGCCTGCTGTTCCAAAAGACTGTCATGAA...AGCCTTTGTTATGAACTGCAAGTTTCCTGACCACTGAAGTTGTATCACTGTTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS-3UTR CCA 90 bp | AATAAAACTCCCTTTAAGACAACCACTGTATTTGTTACCTTCAGCCACACGTCCAGTGTGTCTGACATTTaGCTCTTGGGAAGCATGCCA | + |
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Preference number: 4 (lower is better) Translates to: NKTPFKTTTVFVTFSHTSSVSDI*LLGSMP Trigger: TGGCATGCTTCCCAAGAGCCAAATGTCAGACACACT...GGACGTGTGGCTGAAGGTAACAAATACAGTGGTTGTCTTAAAGGGAGTTTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS-3UTR CCA 90 bp | AATAAAACTCCCTTTAAGACAACCACTGTATTTGTTACCTTCAGCCACACGTCCCTGAAGGTGAGTACTTaGAGGCAGCATCAGACAGAA | + |
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Preference number: 4 (lower is better) Translates to: NKTPFKTTTVFVTFSHTSLKVST*RQHQTE Trigger: TTCTGTCTGATGCTGCCTCCAAGTACTCACCTTCAG...GGACGTGTGGCTGAAGGTAACAAATACAGTGGTTGTCTTAAAGGGAGTTTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS-3UTR TCA 90 bp | ATACAACTTCAGTGGTCAGGAAACTTGCAGTTCATAACAAAGGCTCCCATATGCGCATGGATTCATAATTaGCCCAACGATGAACCTCAT | + |
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Preference number: 4 (lower is better) Translates to: IQLQWSGNLQFITKAPICAWIHN*PNDEPH Trigger: ATGAGGTTCATCGTTGGGTCAATTATGAATCCATGC...GCATATGGGAGCCTTTGTTATGAACTGCAAGTTTCCTGACCACTGAAGTTGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS-3UTR TCA 90 bp | AAAACTGGACCACCAATAGTTACAGCATTCCAAGTTTTAAGACTACTAAGGACAGATCAAGCTCTGGTGTaGAGAGTCCAGCAGGATAGA | + |
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Preference number: 4 (lower is better) Translates to: KTGPPIVTAFQVLRLLRTDQALV*RVQQDR Trigger: TCTATCCTGCTGGACTCTTCACACCAGAGCTTGATC...TGTCCTTAGTAGTCTTAAAACTTGGAATGCTGTAACTATTGGTGGTCCAGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS-3UTR TCA 90 bp | ACAACTTCAGTGGTCAGGAAACTTGCAGTTCATAACAAAGGCTCCCATATGCACATAAAATCTCCAATCTaGAGACGATCAAGCTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: TTSVVRKLAVHNKGSHMHIKSPI*RRSSSG Trigger: ACCAGAGCTTGATCGTCTTCAGATTGGAGATTTTAT...GTGCATATGGGAGCCTTTGTTATGAACTGCAAGTTTCCTGACCACTGAAGTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS-3UTR CCA 90 bp | AATAAAACTCCCTTTAAGACAACCACTGTATTTGTTACCTTCAGCCACACGTCCAGACACGGGTGTATATaGCTTTACTATTTCTGCACC | + |
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Preference number: 4 (lower is better) Translates to: NKTPFKTTTVFVTFSHTSRHGCI*LYYFCT Trigger: GGTGCAGAAATAGTAAAGCCATATACACCCGTGTCT...GGACGTGTGGCTGAAGGTAACAAATACAGTGGTTGTCTTAAAGGGAGTTTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS-3UTR CCA 90 bp | CCAATAGTTACAGCATTCCAAGTTTTAAGACTACTAAGGACATACACCATCAATTTTGCCATTCCATTCTaGAGAAGGTGCCGAGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: PIVTAFQVLRLLRTYTINFAIPF*RRCREN Trigger: GTTCTCTCGGCACCTTCTCCAGAATGGAATGGCAAA...ATTGATGGTGTATGTCCTTAGTAGTCTTAAAACTTGGAATGCTGTAACTATTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS-3UTR TCA 90 bp | CCAATAGTTACAGCATTCCAAGTTTTAAGACTACTAAGGACATACACCATCAATGGCCCTAGAGTTTTCTaGACTTCTTTGCAAAAATTC | + |
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Preference number: 4 (lower is better) Translates to: PIVTAFQVLRLLRTYTINGPRVF*TSLQKF Trigger: GAATTTTTGCAAAGAAGTTCAGAAAACTCTAGGGCC...ATTGATGGTGTATGTCCTTAGTAGTCTTAAAACTTGGAATGCTGTAACTATTGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS CCA 90 bp | TTCTGCACCTGTGACACTGAGCTTGAGGTAAACATGTTGTCCAACTaGCACCTGAAGGTGAGTACTTGGAGGCAGCATCAGACAGAAAAG | + |
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Preference number: 5 (lower is better) Translates to: FCTCDTELEVNMLSN*HLKVSTWRQHQTEK Trigger: CTTTTCTGTCTGATGCTGCCTCCAAGTACTCACCTTCAGGTGCCAGTTGGACAACATGTTTACCTCAAGCTCAGTGTCACAGGTGCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS-3UTR CAA 90 bp | GTGGTCAGGAAACTTGCAGTTCATAACAAAGGCTCCCATATGCACCTGCTGCCACTTCATGACAGTCTTTaGGAACAGCAGGCTTCACAG | + |
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Preference number: 5 (lower is better) Translates to: VVRKLAVHNKGSHMHLLPLHDSL*EQQASQ Trigger: CTGTGAAGCCTGCTGTTCCAAAAGACTGTCATGAAG...TGGCAGCAGGTGCATATGGGAGCCTTTGTTATGAACTGCAAGTTTCCTGACCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS TCA 90 bp | ATTTGGCTCTTGGGAAGCATGCCATTTAAGACTCTCTTTCCTTCATaGCAGTCTTTTGGAACAGCAGGCTTCACAGCCATCCTGCCAACC | + |
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Preference number: 5 (lower is better) Translates to: IWLLGSMPFKTLFPS*QSFGTAGFTAILPT Trigger: GGTTGGCAGGATGGCTGTGAAGCCTGCTGTTCCAAAAGACTGTCATGAAGGAAAGAGAGTCTTAAATGGCATGCTTCCCAAGAGCCAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS CCA 90 bp | CTTGAGGTAAACATGTTGTCCAACTGGCACCTGAAGGTGAGTACTTaGAGGCAGCATCAGACAGAAAAGTCTCGTGTCATGAGTGACATC | + |
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Preference number: 5 (lower is better) Translates to: LEVNMLSNWHLKVST*RQHQTEKSRVMSDI Trigger: GATGTCACTCATGACACGAGACTTTTCTGTCTGATGCTGCCTCCAAGTACTCACCTTCAGGTGCCAGTTGGACAACATGTTTACCTCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS-3UTR CAA 90 bp | CTGACCCTCCAGGTCAGGGTCAGCAGTAAGATAAGTCACGGTACAAAATTAAACAAGTCCTTTCCACTCTaGGTCAGTCGGATCCAATCC | + |
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Preference number: 5 (lower is better) Translates to: LTLQVRVSSKISHGTKLNKSFPL*VSRIQS Trigger: GGATTGGATCCGACTGACCAAGAGTGGAAAGGACTT...GTTTAATTTTGTACCGTGACTTATCTTACTGCTGACCCTGACCTGGAGGGTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS GCA 90 bp | TCACATCCCTGGGCAGTGTGTCTGACATTTGGCTCTTGGGAAGCATaGCATTTAAGACTCTCTTTCCTTCATGACAGTCTTTTGGAACAG | + |
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Preference number: 5 (lower is better) Translates to: SHPWAVCLTFGSWEA*HLRLSFLHDSLLEQ Trigger: CTGTTCCAAAAGACTGTCATGAAGGAAAGAGAGTCTTAAATGGCATGCTTCCCAAGAGCCAAATGTCAGACACACTGCCCAGGGATGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS-3UTR CAA 90 bp | CTGACCCTCCAGGTCAGGGTCAGCAGTAAGATAAGTCACGGTACAAAATTAAACGATATGTGTCCCTGTTaGCCATTCCATTCTGGAGAA | + |
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Preference number: 5 (lower is better) Translates to: LTLQVRVSSKISHGTKLNDMCPC*PFHSGE Trigger: TTCTCCAGAATGGAATGGCAAACAGGGACACATATC...GTTTAATTTTGTACCGTGACTTATCTTACTGCTGACCCTGACCTGGAGGGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS CCA 90 bp | GTGAATCCTGTTCCGGCTGCCAATAGAAAGAGATCTTCTACTTCCTaGAGTTTGGATACTTTAAAATCGCCTTCAGGTCCGCTTACAGAA | + |
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Preference number: 5 (lower is better) Translates to: VNPVPAANRKRSSTS*SLDTLKSPSGPLTE Trigger: TTCTGTAAGCGGACCTGAAGGCGATTTTAAAGTATCCAAACTCCAGGAAGTAGAAGATCTCTTTCTATTGGCAGCCGGAACAGGATTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS-3UTR CAA 90 bp | ATACAACTTCAGTGGTCAGGAAACTTGCAGTTCATAACAAAGGCTCCCATATGCCTTGAGGTAAACATGTaGTCCAACTGGCACCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: IQLQWSGNLQFITKAPICLEVNM*SNWHLK Trigger: CTTCAGGTGCCAGTTGGACAACATGTTTACCTCAAG...GCATATGGGAGCCTTTGTTATGAACTGCAAGTTTCCTGACCACTGAAGTTGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS-3UTR CAA 90 bp | CGAACAGTGATACAACTTCAGTGGTCAGGAAACTTGCAGTTCATAACAAAGGCTTCTGACATTTGGCTCTaGGGAAGCATGCCATTTAAG | + |
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Preference number: 5 (lower is better) Translates to: RTVIQLQWSGNLQFITKASDIWL*GSMPFK Trigger: CTTAAATGGCATGCTTCCCAAGAGCCAAATGTCAGA...AGCCTTTGTTATGAACTGCAAGTTTCCTGACCACTGAAGTTGTATCACTGTTCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS GCA 90 bp | TTTGCAAAAATTCAGAGAGAAGAGCTCGTGATATGTGTCCCTGTTTaGCATTCCATTCTGGAGAAGGTGCCGAGAGAACAAATTCAACAT | + |
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Preference number: 5 (lower is better) Translates to: FAKIQREELVICVPV*HSILEKVPREQIQH Trigger: ATGTTGAATTTGTTCTCTCGGCACCTTCTCCAGAATGGAATGGCAAACAGGGACACATATCACGAGCTCTTCTCTCTGAATTTTTGCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS-3UTR CAA 90 bp | AATAAAACTCCCTTTAAGACAACCACTGTATTTGTTACCTTCAGCCACACGTCCGTGATCACCAAGACATaGCCAAGAAACACTTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: NKTPFKTTTVFVTFSHTSVITKT*PRNTFF Trigger: AAAGAAAGTGTTTCTTGGCAATGTCTTGGTGATCAC...GGACGTGTGGCTGAAGGTAACAAATACAGTGGTTGTCTTAAAGGGAGTTTTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS-3UTR CAA 90 bp | AAAACTGGACCACCAATAGTTACAGCATTCCAAGTTTTAAGACTACTAAGGACACAACAATCTTCTTTCTaGTTGTGCTTCTTAAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: KTGPPIVTAFQVLRLLRTQQSSF*LCFLSS Trigger: AGAGCTTAAGAAGCACAACAAGAAAGAAGATTGTTG...TGTCCTTAGTAGTCTTAAAACTTGGAATGCTGTAACTATTGGTGGTCCAGTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS CCA 72 bp | GGTACCTTGCTGCGCCCCTGGGAGGAGACGCGCTGCTaGGAGCCGGGGGCCGGGAAAGCCTGGGAAGGGACG | + |
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Preference number: 6 (lower is better) Translates to: GTLLRPWEETRC*EPGAGKAWEGT Trigger: CGTCCCTTCCCAGGCTTTCCCGGCCCCCGGCTCCCAGCAGCGCGTCTCCTCCCAGGGGCGCAGCAAGGTACC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS GCA 72 bp | AAAGGTACCTTGCTGCGCCCCTGGGAGGAGACGCGCTaGTGGGAGCCGGGGGCCGGGAAAGCCTGGGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: KGTLLRPWEETR*WEPGAGKAWEG Trigger: CCCTTCCCAGGCTTTCCCGGCCCCCGGCTCCCAGCAGCGCGTCTCCTCCCAGGGGCGCAGCAAGGTACCTTT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS CAA 72 bp | CAATCCATAAGACTCCTGCCTTGTTTTAAAGGTACCTaGCTGCGCCCCTGGGAGGAGACGCGCTGCTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: QSIRLLPCFKGT*LRPWEETRCWE Trigger: CTCCCAGCAGCGCGTCTCCTCCCAGGGGCGCAGCAAGGTACCTTTAAAACAAGGCAGGAGTCTTATGGATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS GCA 72 bp | ATGAACCTCATTAAAAAGATCTGTTCCATCGGCTCCTaGGGCTCTCATGAGTTCATCCTCCCCACCCGGATG | + |
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Preference number: 6 (lower is better) Translates to: MNLIKKICSIGS*GSHEFILPTRM Trigger: CATCCGGGTGGGGAGGATGAACTCATGAGAGCCGCAGGAGCCGATGGAACAGATCTTTTTAATGAGGTTCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS TCA 72 bp | AAGACTCTGTTTGGAACCAATCATAGCTTGGAGAACTaGGGTCTTCCCTGGGCAGTGTGTCTGTCACATCCC | + |
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Preference number: 6 (lower is better) Translates to: KTLFGTNHSLEN*GLPWAVCLSHP Trigger: GGGATGTGACAGACACACTGCCCAGGGAAGACCTCAGTTCTCCAAGCTATGATTGGTTCCAAACAGAGTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS CCA 72 bp | TGTGACACTGAGCTTGAGGTAAACATGTTGTCCAACTaGCACCTGAAGGTGAGTACTTGGAGGCAGCATCAG | + |
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Preference number: 6 (lower is better) Translates to: CDTELEVNMLSN*HLKVSTWRQHQ Trigger: CTGATGCTGCCTCCAAGTACTCACCTTCAGGTGCCAGTTGGACAACATGTTTACCTCAAGCTCAGTGTCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS CAA 72 bp | AACCCGCCCTTCAATCCTGTTAAGTCCTTTCCACTCTaGGTCAGTCGGATCCAATCCATAAGACTCCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: NPPFNPVKSFPL*VSRIQSIRLLP Trigger: AGGCAGGAGTCTTATGGATTGGATCCGACTGACCAAGAGTGGAAAGGACTTAACAGGATTGAAGGGCGGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS CAA 72 bp | TTCTGCACCTGTGACACTGAGCTTGAGGTAAACATGTaGTCCAACTGGCACCTGAAGGTGAGTACTTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: FCTCDTELEVNM*SNWHLKVSTWR Trigger: CCTCCAAGTACTCACCTTCAGGTGCCAGTTGGACAACATGTTTACCTCAAGCTCAGTGTCACAGGTGCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS TCA 72 bp | CATCCTCCCCACCCGGATGGTACTCCATATAAGGGCTaGCGTTGTAAACAAACCCTCTTATGCATATCCAAC | + |
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Preference number: 6 (lower is better) Translates to: HPPHPDGTPYKG*RCKQTLLCISN Trigger: GTTGGATATGCATAAGAGGGTTTGTTTACAACGTCAGCCCTTATATGGAGTACCATCCGGGTGGGGAGGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS CCA 72 bp | GTGTCTGTCACATCCCTGGGCAGTGTGTCTGACATTTaGCTCTTGGGAAGCATGCCATTTAAGACTCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: VSVTSLGSVSDI*LLGSMPFKTLF Trigger: AAAGAGAGTCTTAAATGGCATGCTTCCCAAGAGCCAAATGTCAGACACACTGCCCAGGGATGTGACAGACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS CCA 72 bp | AACATGTTGTCCAACTGGCACCTGAAGGTGAGTACTTaGAGGCAGCATCAGACAGAAAAGTCTCGTGTCATG | + |
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Preference number: 6 (lower is better) Translates to: NMLSNWHLKVST*RQHQTEKSRVM Trigger: CATGACACGAGACTTTTCTGTCTGATGCTGCCTCCAAGTACTCACCTTCAGGTGCCAGTTGGACAACATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS CAA 72 bp | GTCACATCCCTGGGCAGTGTGTCTGACATTTGGCTCTaGGGAAGCATGCCATTTAAGACTCTCTTTCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: VTSLGSVSDIWL*GSMPFKTLFPS Trigger: TGAAGGAAAGAGAGTCTTAAATGGCATGCTTCCCAAGAGCCAAATGTCAGACACACTGCCCAGGGATGTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS CAA 90 bp | CTTTACTATTTCTGCACCTGTGACACTGAGCTTGAGGTAAACATGTaGTCCAACTGGCACCTGAAGGTGAGTACTTGGAGGCAGCATCAG | + |
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Preference number: 6 (lower is better) Translates to: LYYFCTCDTELEVNM*SNWHLKVSTWRQHQ Trigger: CTGATGCTGCCTCCAAGTACTCACCTTCAGGTGCCAGTTGGACAACATGTTTACCTCAAGCTCAGTGTCACAGGTGCAGAAATAGTAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS GCA 72 bp | ATTCAGAGAGAAGAGCTCGTGATATGTGTCCCTGTTTaGCATTCCATTCTGGAGAAGGTGCCGAGAGAACAA | + |
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Preference number: 6 (lower is better) Translates to: IQREELVICVPV*HSILEKVPREQ Trigger: TTGTTCTCTCGGCACCTTCTCCAGAATGGAATGGCAAACAGGGACACATATCACGAGCTCTTCTCTCTGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS CAA 72 bp | TGCCATTTAAGACTCTCTTTCCTTCATGACAGTCTTTaGGAACAGCAGGCTTCACAGCCATCCTGCCAACCA | + |
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Preference number: 6 (lower is better) Translates to: CHLRLSFLHDSL*EQQASQPSCQP Trigger: TGGTTGGCAGGATGGCTGTGAAGCCTGCTGTTCCAAAAGACTGTCATGAAGGAAAGAGAGTCTTAAATGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS CAA 72 bp | AATTCAGAGAGAAGAGCTCGTGATATGTGTCCCTGTTaGCCATTCCATTCTGGAGAAGGTGCCGAGAGAACA | + |
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Preference number: 6 (lower is better) Translates to: NSERRARDMCPC*PFHSGEGAERT Trigger: TGTTCTCTCGGCACCTTCTCCAGAATGGAATGGCAAACAGGGACACATATCACGAGCTCTTCTCTCTGAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS TCA 72 bp | CTTGGAGGCAGCATCAGACAGAAAAGTCTCGTGTCATaGGTGACATCTTCCTTAGATATTAACTGGCACCGT | + |
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Preference number: 6 (lower is better) Translates to: LGGSIRQKSLVS*VTSSLDINWHR Trigger: ACGGTGCCAGTTAATATCTAAGGAAGATGTCACTCATGACACGAGACTTTTCTGTCTGATGCTGCCTCCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS GCA 72 bp | TGGGCAGTGTGTCTGACATTTGGCTCTTGGGAAGCATaGCATTTAAGACTCTCTTTCCTTCATGACAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: WAVCLTFGSWEA*HLRLSFLHDSL Trigger: AAGACTGTCATGAAGGAAAGAGAGTCTTAAATGGCATGCTTCCCAAGAGCCAAATGTCAGACACACTGCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS GCA 72 bp | ATGTACAAGGTAAGAGTGATCCTTGATGACTGCTTCTaGTCTCAAGGAGTCATCCTGGAGGTCAACGATTAC | + |
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Preference number: 6 (lower is better) Translates to: MYKVRVILDDCF*SQGVILEVNDY Trigger: GTAATCGTTGACCTCCAGGATGACTCCTTGAGAGCAGAAGCAGTCATCAAGGATCACTCTTACCTTGTACAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS CCA 72 bp | TCCTTGATGACTGCTTCTGCTCTCAAGGAGTCATCCTaGAGGTCAACGATTACTGAGTCTAAACTGATATTC | + |
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Preference number: 6 (lower is better) Translates to: SLMTASALKESS*RSTITESKLIF Trigger: GAATATCAGTTTAGACTCAGTAATCGTTGACCTCCAGGATGACTCCTTGAGAGCAGAAGCAGTCATCAAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS CAA 90 bp | ACTTCAATTAACCCGCCCTTCAATCCTGTTAAGTCCTTTCCACTCTaGGTCAGTCGGATCCAATCCATAAGACTCCTGCCTTGTTTTAAA | + |
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Preference number: 6 (lower is better) Translates to: TSINPPFNPVKSFPL*VSRIQSIRLLPCFK Trigger: TTTAAAACAAGGCAGGAGTCTTATGGATTGGATCCGACTGACCAAGAGTGGAAAGGACTTAACAGGATTGAAGGGCGGGTTAATTGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS CAA 90 bp | CTTTGCAAAAATTCAGAGAGAAGAGCTCGTGATATGTGTCCCTGTTaGCCATTCCATTCTGGAGAAGGTGCCGAGAGAACAAATTCAACA | + |
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Preference number: 6 (lower is better) Translates to: LCKNSERRARDMCPC*PFHSGEGAERTNST Trigger: TGTTGAATTTGTTCTCTCGGCACCTTCTCCAGAATGGAATGGCAAACAGGGACACATATCACGAGCTCTTCTCTCTGAATTTTTGCAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS CAA 72 bp | GCTGCCAATAGAAAGAGATCTTCTACTTCCTGGAGTTaGGATACTTTAAAATCGCCTTCAGGTCCGCTTACA | + |
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Preference number: 6 (lower is better) Translates to: AANRKRSSTSWS*DTLKSPSGPLT Trigger: TGTAAGCGGACCTGAAGGCGATTTTAAAGTATCCAAACTCCAGGAAGTAGAAGATCTCTTTCTATTGGCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS CAA 90 bp | CCTGTTCCGGCTGCCAATAGAAAGAGATCTTCTACTTCCTGGAGTTaGGATACTTTAAAATCGCCTTCAGGTCCGCTTACAGAAATAAAA | + |
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Preference number: 6 (lower is better) Translates to: PVPAANRKRSSTSWS*DTLKSPSGPLTEIK Trigger: TTTTATTTCTGTAAGCGGACCTGAAGGCGATTTTAAAGTATCCAAACTCCAGGAAGTAGAAGATCTCTTTCTATTGGCAGCCGGAACAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS CCA 72 bp | AGAAATAAAATCTCCAATCTGAAGACGATCAAGCTCTaGTGTGAAGAGTCCAGCAGGATAGATTTTGATCAA | + |
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Preference number: 6 (lower is better) Translates to: RNKISNLKTIKL*CEESSRIDFDQ Trigger: TTGATCAAAATCTATCCTGCTGGACTCTTCACACCAGAGCTTGATCGTCTTCAGATTGGAGATTTTATTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS TCA 72 bp | TCTTTCTTTGGAATGAAAGAATCATGTTTCTCCAGGTaGTCACCAAGACATTGCCAAGAAACACTTTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: SFFGMKESCFSR*SPRHCQETLSF Trigger: GAAAGAAAGTGTTTCTTGGCAATGTCTTGGTGATCACCTGGAGAAACATGATTCTTTCATTCCAAAGAAAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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| CDS CAA 72 bp | AACCCTCTTATGCATATCCAACAATCTTCTTTCTTGTaGTGCTTCTTAAGCTCTTCTTCAGTTACTTCAATT | + |
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Preference number: 6 (lower is better) Translates to: NPLMHIQQSSFL*CFLSSSSVTSI Trigger: AATTGAAGTAACTGAAGAAGAGCTTAAGAAGCACAACAAGAAAGAAGATTGTTGGATATGCATAAGAGGGTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168529.9 |
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