Pregenerated sensors for CYB5R3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018042Ensembl transcript IDs: ENSMUST00000018186.16, ENSMUST00000162178.8, ENSMUST00000162834.3
Found 196 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCTTTGTCCTAGCCCTGGGAAACCAGCCCTGGGACAGCCCAGTCTaGATTTCCACAGACCACCACAAAGGGGCAGCACTGGCCCTGACC | + |
|
Preference number: 1 (lower is better) Translates to: AFVLALGNQPWDSPV*ISTDHHKGAALALT Trigger: GGTCAGGGCCAGTGCTGCCCCTTTGTGGTGGTCTGTGGAAATGCAGACTGGGCTGTCCCAGGGCTGGTTTCCCAGGGCTAGGACAAAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR CCA 90 bp | GGCCCCAGCATGGATGTGGGCATATGTCAGGGTGAGCGACAGTGGTaGGGAAGGAAGGGGTGGACAGGTGGTTGTGGTGAGTGCGTGAGC | + |
|
Preference number: 1 (lower is better) Translates to: GPSMDVGICQGERQW*GRKGWTGGCGECVS Trigger: GCTCACGCACTCACCACAACCACCTGTCCACCCCTTCCTTCCCCACCACTGTCGCTCACCCTGACATATGCCCACATCCATGCTGGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| 3UTR CCA 90 bp | CCAGGCGACTACCCAGCCTTTGTCCTAGCCCTGGGAAACCAGCCCTaGGACAGCCCAGTCTGCATTTCCACAGACCACCACAAAGGGGCA | + |
|
Preference number: 1 (lower is better) Translates to: PGDYPAFVLALGNQP*DSPVCISTDHHKGA Trigger: TGCCCCTTTGTGGTGGTCTGTGGAAATGCAGACTGGGCTGTCCCAGGGCTGGTTTCCCAGGGCTAGGACAAAGGCTGGGTAGTCGCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR GCA 90 bp | AAGTGTGTGGGGAGAGTAGACTCTTCAGTGGAGTTGCCTGCAAGGTaGACGGTCACGAGTGGGCCCATGCTGGGGTGGCTTCTTGCCGAT | + |
|
Preference number: 1 (lower is better) Translates to: KCVGRVDSSVELPAR*TVTSGPMLGWLLAD Trigger: ATCGGCAAGAAGCCACCCCAGCATGGGCCCACTCGTGACCGTGCACCTTGCAGGCAACTCCACTGAAGAGTCTACTCTCCCCACACACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR GCA 90 bp | AGCAGTGAAGTGTGTGGGGAGAGTAGACTCTTCAGTGGAGTTGCCTaGAAGGTGCACGGTCACGAGTGGGCCCATGCTGGGGTGGCTTCT | + |
|
Preference number: 1 (lower is better) Translates to: SSEVCGESRLFSGVA*KVHGHEWAHAGVAS Trigger: AGAAGCCACCCCAGCATGGGCCCACTCGTGACCGTGCACCTTGCAGGCAACTCCACTGAAGAGTCTACTCTCCCCACACACTTCACTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR CCA 90 bp | GGTGGAGAGATAAGCCAGGGACCCCCAAGGTCTACCAAACTCTGTTaGGCTGACAACTTAGGGCACTCAAGACTGCATGGAGTCGGGGGC | + |
|
Preference number: 1 (lower is better) Translates to: GGEISQGPPRSTKLC*ADNLGHSRLHGVGG Trigger: GCCCCCGACTCCATGCAGTCTTGAGTGCCCTAAGTTGTCAGCCCAACAGAGTTTGGTAGACCTTGGGGGTCCCTGGCTTATCTCTCCACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| 3UTR TCA 90 bp | AGAGATAAGCCAGGGACCCCCAAGGTCTACCAAACTCTGTTGGGCTaGCAACTTAGGGCACTCAAGACTGCATGGAGTCGGGGGCAGTGT | + |
|
Preference number: 1 (lower is better) Translates to: RDKPGTPKVYQTLLG*QLRALKTAWSRGQC Trigger: ACACTGCCCCCGACTCCATGCAGTCTTGAGTGCCCTAAGTTGTCAGCCCAACAGAGTTTGGTAGACCTTGGGGGTCCCTGGCTTATCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| 3UTR GCA 90 bp | CCAGCACAGCTCCTCCACAGCACTGTGAACTCAGCCCACAGCTTATaGAAGTGCATGGCAGAGTCAGGGCAACCAGCAGCTATTCAACAG | + |
|
Preference number: 1 (lower is better) Translates to: PAQLLHSTVNSAHSL*KCMAESGQPAAIQQ Trigger: CTGTTGAATAGCTGCTGGTTGCCCTGACTCTGCCATGCACTTGCATAAGCTGTGGGCTGAGTTCACAGTGCTGTGGAGGAGCTGTGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR GCA 90 bp | TGCTCCACTGACTCACACACACATGGCTTGGCCATGTTGAATAGCTaGTCCTTCCCACTGAAACTCCTTCTTGCCAGGGGGAGAAGGGAG | + |
|
Preference number: 1 (lower is better) Translates to: CSTDSHTHGLAMLNS*SFPLKLLLARGRRE Trigger: CTCCCTTCTCCCCCTGGCAAGAAGGAGTTTCAGTGGGAAGGAGCAGCTATTCAACATGGCCAAGCCATGTGTGTGTGAGTCAGTGGAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR TCA 90 bp | ATGACCTTAACGTCTGATCCTCCTGCTCCCACTTTCCCTGACTGCTaGGACTTTGAGTATACGCCACCATGTCCCACGTGGCTGTGCTGT | + |
|
Preference number: 1 (lower is better) Translates to: MTLTSDPPAPTFPDC*DFEYTPPCPTWLCC Trigger: ACAGCACAGCCACGTGGGACATGGTGGCGTATACTCAAAGTCTCAGCAGTCAGGGAAAGTGGGAGCAGGAGGATCAGACGTTAAGGTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR CCA 90 bp | AGGGCTCAAAAAGCTCTAGAAATCTGGGACTTGCCAGGGCCTCCCTaGGGTTACAGAGCAGTGAAGTGTGTGGGGAGAGTAGACTCTTCA | + |
|
Preference number: 1 (lower is better) Translates to: RAQKALEIWDLPGPP*GYRAVKCVGRVDSS Trigger: TGAAGAGTCTACTCTCCCCACACACTTCACTGCTCTGTAACCCCAGGGAGGCCCTGGCAAGTCCCAGATTTCTAGAGCTTTTTGAGCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR GCA 90 bp | CTTTCTTTCCTAGATGAAAAGCAGCCCTTCAGACACCACACCCAGTaGTCCACTGACTCACACACACATGGCTTGGCCATGTTGAATAGC | + |
|
Preference number: 1 (lower is better) Translates to: LSFLDEKQPFRHHTQ*STDSHTHGLAMLNS Trigger: GCTATTCAACATGGCCAAGCCATGTGTGTGTGAGTCAGTGGAGCACTGGGTGTGGTGTCTGAAGGGCTGCTTTTCATCTAGGAAAGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR CCA 90 bp | CTCCGAAACCCCACTAAACTCCTTAGGCACCAAGGTGGACTTGGGTaGAATCATTGCCTCTCTACCAAAGGTAGATACAAAGAGTTGATC | + |
|
Preference number: 1 (lower is better) Translates to: LRNPTKLLRHQGGLG*NHCLSTKGRYKELI Trigger: GATCAACTCTTTGTATCTACCTTTGGTAGAGAGGCAATGATTCCACCCAAGTCCACCTTGGTGCCTAAGGAGTTTAGTGGGGTTTCGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR GCA 90 bp | CCCACTAAACTCCTTAGGCACCAAGGTGGACTTGGGTGGAATCATTaGCTCTCTACCAAAGGTAGATACAAAGAGTTGATCTTTCTGCTC | + |
|
Preference number: 1 (lower is better) Translates to: PTKLLRHQGGLGWNH*LSTKGRYKELIFLL Trigger: GAGCAGAAAGATCAACTCTTTGTATCTACCTTTGGTAGAGAGGCAATGATTCCACCCAAGTCCACCTTGGTGCCTAAGGAGTTTAGTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR-3UTR TCA 90 bp | CCCAAGGGACCCCTGGCCAGCAAGTGGGGGCTGGCCTGTCTCTGCCAGACACCCGCCAGTACAGCTGGATaGCCAGGGCTGGGCAGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: PKGPLASKWGLACLCQTPASTAG*PGLGRP Trigger: TGGCCTGCCCAGCCCTGGTCATCCAGCTGTACTGGC...GGGTGTCTGGCAGAGACAGGCCAGCCCCCACTTGCTGGCCAGGGGTCCCTTGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| 3UTR-3UTR CCA 90 bp | CCCAAGGGACCCCTGGCCAGCAAGTGGGGGCTGGCCTGTCTCTGCCAGACACCCGCCCCAGCATGGATGTaGGCATATGTCAGGGTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: PKGPLASKWGLACLCQTPAPAWM*AYVRVS Trigger: GCTCACCCTGACATATGCCCACATCCATGCTGGGGC...GGGTGTCTGGCAGAGACAGGCCAGCCCCCACTTGCTGGCCAGGGGTCCCTTGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| 3UTR-3UTR CCA 90 bp | CCCAAGGGACCCCTGGCCAGCAAGTGGGGGCTGGCCTGTCTCTGCCAGACACCCCCTAAGGCAGGTAGGTaGTTAGGTGGCAGGCATGGT | + |
|
Preference number: 2 (lower is better) Translates to: PKGPLASKWGLACLCQTPPKAGR*LGGRHG Trigger: ACCATGCCTGCCACCTAACCACCTACCTGCCTTAGG...GGGTGTCTGGCAGAGACAGGCCAGCCCCCACTTGCTGGCCAGGGGTCCCTTGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| 3UTR CAA 90 bp | CGAGTGGGCCCATGCTGGGGTGGCTTCTTGCCGATGCGGCTACTTTaGAGTCACCAGGTCCCAGTAAGAGACCCTCATCAGGCACGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: RVGPCWGGFLPMRLL*SHQVPVRDPHQARS Trigger: GGAGCGTGCCTGATGAGGGTCTCTTACTGGGACCTGGTGACTCAAAAGTAGCCGCATCGGCAAGAAGCCACCCCAGCATGGGCCCACTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR CAA 90 bp | CTGCAAGGTGCACGGTCACGAGTGGGCCCATGCTGGGGTGGCTTCTaGCCGATGCGGCTACTTTTGAGTCACCAGGTCCCAGTAAGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: LQGARSRVGPCWGGF*PMRLLLSHQVPVRD Trigger: GTCTCTTACTGGGACCTGGTGACTCAAAAGTAGCCGCATCGGCAAGAAGCCACCCCAGCATGGGCCCACTCGTGACCGTGCACCTTGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGCACTCAAGACTGCATGGAGTCGGGGGCAGTGTGTATAGTTTTGGAAGGGTCGCCAGTACAGCTGGATaGCCAGGGCTGGGCAGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: GHSRLHGVGGSVYSFGRVASTAG*PGLGRP Trigger: TGGCCTGCCCAGCCCTGGTCATCCAGCTGTACTGGC...GACCCTTCCAAAACTATACACACTGCCCCCGACTCCATGCAGTCTTGAGTGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| 3UTR CAA 90 bp | TACAGAGCAGTGAAGTGTGTGGGGAGAGTAGACTCTTCAGTGGAGTaGCCTGCAAGGTGCACGGTCACGAGTGGGCCCATGCTGGGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: YRAVKCVGRVDSSVE*PARCTVTSGPMLGW Trigger: CCACCCCAGCATGGGCCCACTCGTGACCGTGCACCTTGCAGGCAACTCCACTGAAGAGTCTACTCTCCCCACACACTTCACTGCTCTGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR-3UTR TCA 90 bp | CATGGTACTGACAGCTCACGCTCACGCTCTCCCTCCCTCTCTCTTCCTCTTCTCGTTGTGGTGAGTGCGTaGGCAGCAGGCACAGGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: HGTDSSRSRSPSLSLPLLVVVSA*AAGTGL Trigger: CAAGCCTGTGCCTGCTGCTCACGCACTCACCACAAC...GAGAAGAGGAAGAGAGAGGGAGGGAGAGCGTGAGCGTGAGCTGTCAGTACCATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| 3UTR-3UTR CCA 90 bp | CATGGTACTGACAGCTCACGCTCACGCTCTCCCTCCCTCTCTCTTCCTCTTCTCGGTGAGCGACAGTGGTaGGGAAGGAAGGGGTGGACA | + |
|
Preference number: 2 (lower is better) Translates to: HGTDSSRSRSPSLSLPLLGERQW*GRKGWT Trigger: TGTCCACCCCTTCCTTCCCCACCACTGTCGCTCACC...GAGAAGAGGAAGAGAGAGGGAGGGAGAGCGTGAGCGTGAGCTGTCAGTACCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| 3UTR-3UTR CCA 90 bp | GGGCACTCAAGACTGCATGGAGTCGGGGGCAGTGTGTATAGTTTTGGAAGGGTCCCAGCAAGTGGGGGCTaGCCTGTCTCTGCCAGACAC | + |
|
Preference number: 2 (lower is better) Translates to: GHSRLHGVGGSVYSFGRVPASGG*PVSARH Trigger: GTGTCTGGCAGAGACAGGCCAGCCCCCACTTGCTGG...GACCCTTCCAAAACTATACACACTGCCCCCGACTCCATGCAGTCTTGAGTGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| 3UTR CAA 90 bp | CATTCGCCGTATGTGTGGGCCTTGTGTCTGGATCTTAAGGGCCTGTaGCTGCTTCTGCGTGGGCCACGGTGGTACTGGATAAAGGGACCG | + |
|
Preference number: 2 (lower is better) Translates to: HSPYVWALCLDLKGL*LLLRGPRWYWIKGP Trigger: CGGTCCCTTTATCCAGTACCACCGTGGCCCACGCAGAAGCAGCAACAGGCCCTTAAGATCCAGACACAAGGCCCACACATACGGCGAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGCACTCAAGACTGCATGGAGTCGGGGGCAGTGTGTATAGTTTTGGAAGGGTCGTTGTGGTGAGTGCGTaGGCAGCAGGCACAGGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: GHSRLHGVGGSVYSFGRVVVVSA*AAGTGL Trigger: CAAGCCTGTGCCTGCTGCTCACGCACTCACCACAAC...GACCCTTCCAAAACTATACACACTGCCCCCGACTCCATGCAGTCTTGAGTGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| 3UTR-3UTR TCA 90 bp | GGGCACTCAAGACTGCATGGAGTCGGGGGCAGTGTGTATAGTTTTGGAAGGGTCGACAGGTGGTTGTGGTaGGTGCGTGAGCAGCAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: GHSRLHGVGGSVYSFGRVDRWLW*VREQQA Trigger: TGCCTGCTGCTCACGCACTCACCACAACCACCTGTC...GACCCTTCCAAAACTATACACACTGCCCCCGACTCCATGCAGTCTTGAGTGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| 3UTR-3UTR GCA 90 bp | CAGCCCTGGGACAGCCCAGTCTGCATTTCCACAGACCACCACAAAGGGGCAGCAAACAGTCTCAGAGTATaGAGGGAAGGGATGGGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: QPWDSPVCISTDHHKGAANSLRV*REGMGA Trigger: AGCCCCCATCCCTTCCCTGCATACTCTGAGACTGTT...TGCTGCCCCTTTGTGGTGGTCTGTGGAAATGCAGACTGGGCTGTCCCAGGGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR-3UTR CCA 90 bp | CCAGCAAGTGGGGGCTGGCCTGTCTCTGCCAGACACCCTCCTAAGAAAACCTTTGCCCCAGCATGGATGTaGGCATATGTCAGGGTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: PASGGWPVSARHPPKKTFAPAWM*AYVRVS Trigger: GCTCACCCTGACATATGCCCACATCCATGCTGGGGC...AAAGGTTTTCTTAGGAGGGTGTCTGGCAGAGACAGGCCAGCCCCCACTTGCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| 3UTR-3UTR CCA 90 bp | TTCATGGCAATGGGTAGACATGGTACTGACAGCTCACGCTCACGCTCTCCCTCCTGGGGAAGGAAGGGGTaGACAGGTGGTTGTGGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: FMAMGRHGTDSSRSRSPSWGRKG*TGGCGE Trigger: CTCACCACAACCACCTGTCCACCCCTTCCTTCCCCA...GGAGGGAGAGCGTGAGCGTGAGCTGTCAGTACCATGTCTACCCATTGCCATGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| 3UTR-3UTR CCA 90 bp | GGGCACTCAAGACTGCATGGAGTCGGGGGCAGTGTGTATAGTTTTGGAAGGGTCTGGGGAAGGAAGGGGTaGACAGGTGGTTGTGGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: GHSRLHGVGGSVYSFGRVWGRKG*TGGCGE Trigger: CTCACCACAACCACCTGTCCACCCCTTCCTTCCCCA...GACCCTTCCAAAACTATACACACTGCCCCCGACTCCATGCAGTCTTGAGTGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| 3UTR-3UTR CCA 90 bp | TTAGGGCACTCAAGACTGCATGGAGTCGGGGGCAGTGTGTATAGTTTTGGAAGGCCAGCAAGTGGGGGCTaGCCTGTCTCTGCCAGACAC | + |
|
Preference number: 2 (lower is better) Translates to: LGHSRLHGVGGSVYSFGRPASGG*PVSARH Trigger: GTGTCTGGCAGAGACAGGCCAGCCCCCACTTGCTGG...CCTTCCAAAACTATACACACTGCCCCCGACTCCATGCAGTCTTGAGTGCCCTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| 3UTR-3UTR CCA 90 bp | AGCTCTAGAAATCTGGGACTTGCCAGGGCCTCCCTGGGGTTACAGAGCAGTGAACCACCATGTCCCACGTaGCTGTGCTGTAGGTCAGAC | + |
|
Preference number: 2 (lower is better) Translates to: SSRNLGLARASLGLQSSEPPCPT*LCCRSD Trigger: GTCTGACCTACAGCACAGCCACGTGGGACATGGTGG...TTCACTGCTCTGTAACCCCAGGGAGGCCCTGGCAAGTCCCAGATTTCTAGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR CAA 90 bp | CACACCCAGTGCTCCACTGACTCACACACACATGGCTTGGCCATGTaGAATAGCTGCTCCTTCCCACTGAAACTCCTTCTTGCCAGGGGG | + |
|
Preference number: 2 (lower is better) Translates to: HTQCSTDSHTHGLAM*NSCSFPLKLLLARG Trigger: CCCCCTGGCAAGAAGGAGTTTCAGTGGGAAGGAGCAGCTATTCAACATGGCCAAGCCATGTGTGTGTGAGTCAGTGGAGCACTGGGTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR-3UTR TCA 90 bp | AGCATTCTGACAGTGCACGGTACACAGGCCAGGCTCACAGGGCCTTTTTGTATGGCTGCTCCTTCCCACTaGAACTCCTTCTTGCCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: SILTVHGTQARLTGPFCMAAPSH*NSFLPG Trigger: CCCTGGCAAGAAGGAGTTTCAGTGGGAAGGAGCAGC...CATACAAAAAGGCCCTGTGAGCCTGGCCTGTGTACCGTGCACTGTCAGAATGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR-3UTR CCA 90 bp | GGACCCCCAAGGTCTACCAAACTCTGTTGGGCTGACAACTTAGGGCACTCAAGAACCCAGGCCCCAGCATaGATGTGGGCATATGTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: GPPRSTKLCWADNLGHSRTQAPA*MWAYVR Trigger: CCTGACATATGCCCACATCCATGCTGGGGCCTGGGT...TCTTGAGTGCCCTAAGTTGTCAGCCCAACAGAGTTTGGTAGACCTTGGGGGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| 3UTR-3UTR GCA 90 bp | CAGCCCTGGGACAGCCCAGTCTGCATTTCCACAGACCACCACAAAGGGGCAGCAATACATTGCCCTCTCTaGCTGGGGCTAATAGAAACA | + |
|
Preference number: 2 (lower is better) Translates to: QPWDSPVCISTDHHKGAAIHCPL*LGLIET Trigger: TGTTTCTATTAGCCCCAGGCAGAGAGGGCAATGTAT...TGCTGCCCCTTTGTGGTGGTCTGTGGAAATGCAGACTGGGCTGTCCCAGGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR-3UTR GCA 90 bp | GTCATTCTCCAGATAGCTGCTCCCTGGCAAGCCCACCTCCCACTCCTTTCTTTCAGACACCACACCCAGTaGTCCACTGACTCACACACA | + |
|
Preference number: 2 (lower is better) Translates to: VILQIAAPWQAHLPLLSFRHHTQ*STDSHT Trigger: TGTGTGTGAGTCAGTGGAGCACTGGGTGTGGTGTCT...GAAAGAAAGGAGTGGGAGGTGGGCTTGCCAGGGAGCAGCTATCTGGAGAATGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR-3UTR CCA 90 bp | TTAGGGCACTCAAGACTGCATGGAGTCGGGGGCAGTGTGTATAGTTTTGGAAGGACCCAGGCCCCAGCATaGATGTGGGCATATGTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: LGHSRLHGVGGSVYSFGRTQAPA*MWAYVR Trigger: CCTGACATATGCCCACATCCATGCTGGGGCCTGGGT...CCTTCCAAAACTATACACACTGCCCCCGACTCCATGCAGTCTTGAGTGCCCTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| 3UTR-3UTR CCA 90 bp | GCTACTTTTGAGTCACCAGGTCCCAGTAAGAGACCCTCATCAGGCACGCTCCTCGCACCAAGGTGGACTTaGGTGGAATCATTGCCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: ATFESPGPSKRPSSGTLLAPRWT*VESLPL Trigger: GAGAGGCAATGATTCCACCCAAGTCCACCTTGGTGC...GAGGAGCGTGCCTGATGAGGGTCTCTTACTGGGACCTGGTGACTCAAAAGTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR-3UTR TCA 90 bp | CTGACTCAGCTCATTAGTCACTGCAAGCTTCCTAGGAATGCTCTGGAGCAAGGCAGCCCAGGCTGGCCTTaGACTTGCTATGTGGTTGAG | + |
|
Preference number: 2 (lower is better) Translates to: LTQLISHCKLPRNALEQGSPGWP*TCYVVE Trigger: CTCAACCACATAGCAAGTTCAAGGCCAGCCTGGGCT...GCCTTGCTCCAGAGCATTCCTAGGAAGCTTGCAGTGACTAATGAGCTGAGTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR-3UTR TCA 90 bp | AGCATTCTGACAGTGCACGGTACACAGGCCAGGCTCACAGGGCCTTTTTGTATGATGGCTTGGCCATGTTaGATAGCTGCTCCTTCCCAC | + |
|
Preference number: 2 (lower is better) Translates to: SILTVHGTQARLTGPFCMMAWPC*IAAPSH Trigger: GTGGGAAGGAGCAGCTATTCAACATGGCCAAGCCAT...CATACAAAAAGGCCCTGTGAGCCTGGCCTGTGTACCGTGCACTGTCAGAATGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCATTCTCCAGATAGCTGCTCCCTGGCAAGCCCACCTCCCACTCCTTTCTTTCTATGCAGGGAAGGGATaGGGGCTGTTTTCTTTACAG | + |
|
Preference number: 2 (lower is better) Translates to: VILQIAAPWQAHLPLLSFYAGKG*GLFSLQ Trigger: CTGTAAAGAAAACAGCCCCCATCCCTTCCCTGCATA...GAAAGAAAGGAGTGGGAGGTGGGCTTGCCAGGGAGCAGCTATCTGGAGAATGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR CAA 90 bp | TTCAGACACCACACCCAGTGCTCCACTGACTCACACACACATGGCTaGGCCATGTTGAATAGCTGCTCCTTCCCACTGAAACTCCTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: FRHHTQCSTDSHTHG*AMLNSCSFPLKLLL Trigger: AAGAAGGAGTTTCAGTGGGAAGGAGCAGCTATTCAACATGGCCAAGCCATGTGTGTGTGAGTCAGTGGAGCACTGGGTGTGGTGTCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR CAA 90 bp | CGCTCCTCCGAAACCCCACTAAACTCCTTAGGCACCAAGGTGGACTaGGGTGGAATCATTGCCTCTCTACCAAAGGTAGATACAAAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: RSSETPLNSLGTKVD*GGIIASLPKVDTKS Trigger: ACTCTTTGTATCTACCTTTGGTAGAGAGGCAATGATTCCACCCAAGTCCACCTTGGTGCCTAAGGAGTTTAGTGGGGTTTCGGAGGAGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTACTTTTGAGTCACCAGGTCCCAGTAAGAGACCCTCATCAGGCACGCTCCTCAGTGTTGGGTTTTGTTaGTTTAAGAGGACAGGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: ATFESPGPSKRPSSGTLLSVGFC*FKRTGS Trigger: AGACCCTGTCCTCTTAAAGCAACAAAACCCAACACT...GAGGAGCGTGCCTGATGAGGGTCTCTTACTGGGACCTGGTGACTCAAAAGTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR CAA 90 bp | AATACATTGCCCTCTCTGCCTGGGGCTAATAGAAACAGTCTATCTTaGCCTTCTCTACCTGGGGTGACTAGAAACAGTCTCAGAGTATGC | + |
|
Preference number: 2 (lower is better) Translates to: NTLPSLPGANRNSLS*PSLPGVTRNSLRVC Trigger: GCATACTCTGAGACTGTTTCTAGTCACCCCAGGTAGAGAAGGCAAAGATAGACTGTTTCTATTAGCCCCAGGCAGAGAGGGCAATGTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR-3UTR GCA 90 bp | GTGATCTCTCTATCCCCTGATTTTTACACGAAGCAGGAGAAGGAAGAACACTCTTCAGCCCACAGCTTATaGAAGTGCATGGCAGAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: VISLSPDFYTKQEKEEHSSAHSL*KCMAES Trigger: TGACTCTGCCATGCACTTGCATAAGCTGTGGGCTGA...AGAGTGTTCTTCCTTCTCCTGCTTCGTGTAAAAATCAGGGGATAGAGAGATCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR GCA 72 bp | GGGAGAGTAGACTCTTCAGTGGAGTTGCCTGCAAGGTaGACGGTCACGAGTGGGCCCATGCTGGGGTGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: GRVDSSVELPAR*TVTSGPMLGWL Trigger: AAGCCACCCCAGCATGGGCCCACTCGTGACCGTGCACCTTGCAGGCAACTCCACTGAAGAGTCTACTCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR GCA 72 bp | CTAGCCCTGGGAAACCAGCCCTGGGACAGCCCAGTCTaGATTTCCACAGACCACCACAAAGGGGCAGCACTG | + |
|
Preference number: 3 (lower is better) Translates to: LALGNQPWDSPV*ISTDHHKGAAL Trigger: CAGTGCTGCCCCTTTGTGGTGGTCTGTGGAAATGCAGACTGGGCTGTCCCAGGGCTGGTTTCCCAGGGCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR CCA 72 bp | TACCCAGCCTTTGTCCTAGCCCTGGGAAACCAGCCCTaGGACAGCCCAGTCTGCATTTCCACAGACCACCAC | + |
|
Preference number: 3 (lower is better) Translates to: YPAFVLALGNQP*DSPVCISTDHH Trigger: GTGGTGGTCTGTGGAAATGCAGACTGGGCTGTCCCAGGGCTGGTTTCCCAGGGCTAGGACAAAGGCTGGGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR GCA 72 bp | CTGACCCTGCAGGAGGGCAGTCATTCTCCAGATAGCTaGTCCCTGGCAAGCCCACCTCCCACTCCTTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LTLQEGSHSPDS*SLASPPPTPFF Trigger: AAAGAAAGGAGTGGGAGGTGGGCTTGCCAGGGAGCAGCTATCTGGAGAATGACTGCCCTCCTGCAGGGTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR CCA 72 bp | ATGGATGTGGGCATATGTCAGGGTGAGCGACAGTGGTaGGGAAGGAAGGGGTGGACAGGTGGTTGTGGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: MDVGICQGERQW*GRKGWTGGCGE Trigger: CTCACCACAACCACCTGTCCACCCCTTCCTTCCCCACCACTGTCGCTCACCCTGACATATGCCCACATCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCCTGGGACAGCCCAGTCTGCATTTCCACAGACCACCACAAAGGGGCAGCATCACACACACATGGCTaGGCCATGTTGAATAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: QPWDSPVCISTDHHKGAASHTHG*AMLNSC Trigger: GCAGCTATTCAACATGGCCAAGCCATGTGTGTGTGA...TGCTGCCCCTTTGTGGTGGTCTGTGGAAATGCAGACTGGGCTGTCCCAGGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR TCA 72 bp | CCAGGGACCCCCAAGGTCTACCAAACTCTGTTGGGCTaGCAACTTAGGGCACTCAAGACTGCATGGAGTCGG | + |
|
Preference number: 3 (lower is better) Translates to: PGTPKVYQTLLG*QLRALKTAWSR Trigger: CCGACTCCATGCAGTCTTGAGTGCCCTAAGTTGTCAGCCCAACAGAGTTTGGTAGACCTTGGGGGTCCCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| 3UTR CCA 72 bp | AGACCTAGCATTCGCCGTATGTGTGGGCCTTGTGTCTaGATCTTAAGGGCCTGTTGCTGCTTCTGCGTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: RPSIRRMCGPCV*ILRACCCFCVG Trigger: GCCCACGCAGAAGCAGCAACAGGCCCTTAAGATCCAGACACAAGGCCCACACATACGGCGAATGCTAGGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR TCA 72 bp | CTGGCAAGCCCACCTCCCACTCCTTTCTTTCCTAGATaGAAAGCAGCCCTTCAGACACCACACCCAGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: LASPPPTPFFPR*KAALQTPHPVL Trigger: GAGCACTGGGTGTGGTGTCTGAAGGGCTGCTTTTCATCTAGGAAAGAAAGGAGTGGGAGGTGGGCTTGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR CCA 72 bp | TGCAGGAGGGCAGTCATTCTCCAGATAGCTGCTCCCTaGCAAGCCCACCTCCCACTCCTTTCTTTCCTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: CRRAVILQIAAP*QAHLPLLSFLD Trigger: ATCTAGGAAAGAAAGGAGTGGGAGGTGGGCTTGCCAGGGAGCAGCTATCTGGAGAATGACTGCCCTCCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCATTCTGACAGTGCACGGTACACAGGCCAGGCTCACAGGGCCTTTTTGTATGGGCACCAAGGTGGACTaGGGTGGAATCATTGCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SILTVHGTQARLTGPFCMGTKVD*GGIIAS Trigger: AGAGGCAATGATTCCACCCAAGTCCACCTTGGTGCC...CATACAAAAAGGCCCTGTGAGCCTGGCCTGTGTACCGTGCACTGTCAGAATGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR GCA 72 bp | GACTCACACACACATGGCTTGGCCATGTTGAATAGCTaGTCCTTCCCACTGAAACTCCTTCTTGCCAGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: DSHTHGLAMLNS*SFPLKLLLARG Trigger: CCCCCTGGCAAGAAGGAGTTTCAGTGGGAAGGAGCAGCTATTCAACATGGCCAAGCCATGTGTGTGTGAGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR CCA 72 bp | ACTGCAAGCTTCCTAGGAATGCTCTGGAGCAAGGCGTaGTGTAGGCACGGCCTAGGCATAAGCATTCTGACA | + |
|
Preference number: 3 (lower is better) Translates to: TASFLGMLWSKA*CRHGLGISILT Trigger: TGTCAGAATGCTTATGCCTAGGCCGTGCCTACACCACGCCTTGCTCCAGAGCATTCCTAGGAAGCTTGCAGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR CCA 72 bp | AGCTCATTAGTCACTGCAAGCTTCCTAGGAATGCTCTaGAGCAAGGCGTGGTGTAGGCACGGCCTAGGCATA | + |
|
Preference number: 3 (lower is better) Translates to: SSLVTASFLGML*SKAWCRHGLGI Trigger: TATGCCTAGGCCGTGCCTACACCACGCCTTGCTCCAGAGCATTCCTAGGAAGCTTGCAGTGACTAATGAGCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR GCA 72 bp | CACAGCACTGTGAACTCAGCCCACAGCTTATGCAAGTaGATGGCAGAGTCAGGGCAACCAGCAGCTATTCAA | + |
|
Preference number: 3 (lower is better) Translates to: HSTVNSAHSLCK*MAESGQPAAIQ Trigger: TTGAATAGCTGCTGGTTGCCCTGACTCTGCCATGCACTTGCATAAGCTGTGGGCTGAGTTCACAGTGCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR GCA 72 bp | TGCATTTGCACCCCTCTGACTCAGCTCATTAGTCACTaGAAGCTTCCTAGGAATGCTCTGGAGCAAGGCGTG | + |
|
Preference number: 3 (lower is better) Translates to: CICTPLTQLISH*KLPRNALEQGV Trigger: CACGCCTTGCTCCAGAGCATTCCTAGGAAGCTTGCAGTGACTAATGAGCTGAGTCAGAGGGGTGCAAATGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR CCA 72 bp | ATAAGCCAGGGACCCCCAAGGTCTACCAAACTCTGTTaGGCTGACAACTTAGGGCACTCAAGACTGCATGGA | + |
|
Preference number: 3 (lower is better) Translates to: ISQGPPRSTKLC*ADNLGHSRLHG Trigger: TCCATGCAGTCTTGAGTGCCCTAAGTTGTCAGCCCAACAGAGTTTGGTAGACCTTGGGGGTCCCTGGCTTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| 3UTR CCA 72 bp | ACGGTACACAGGCCAGGCTCACAGGGCCTTTTTGTATaGTGTTTCGTTATTCAGGTCCCAAAGGTGACCCTG | + |
|
Preference number: 3 (lower is better) Translates to: TVHRPGSQGLFV*CFVIQVPKVTL Trigger: CAGGGTCACCTTTGGGACCTGAATAACGAAACACCATACAAAAAGGCCCTGTGAGCCTGGCCTGTGTACCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR-3UTR CAA 90 bp | GACTTGCCAGGGCCTCCCTGGGGTTACAGAGCAGTGAAGTGTGTGGGGAGAGTAGAACTTGCTATGTGGTaGAGAATGAATGACCTTAAC | + |
|
Preference number: 3 (lower is better) Translates to: DLPGPPWGYRAVKCVGRVELAMW*RMNDLN Trigger: GTTAAGGTCATTCATTCTCAACCACATAGCAAGTTC...TACTCTCCCCACACACTTCACTGCTCTGTAACCCCAGGGAGGCCCTGGCAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTGTGGGGAGAGTAGACTCTTCAGTGGAGTTGCCTGCAAGGTGCACGGTCACGGGTAGATACAAAGAGTaGATCTTTCTGCTCTTTACC | + |
|
Preference number: 3 (lower is better) Translates to: CVGRVDSSVELPARCTVTGRYKE*IFLLFT Trigger: GGTAAAGAGCAGAAAGATCAACTCTTTGTATCTACC...CGTGACCGTGCACCTTGCAGGCAACTCCACTGAAGAGTCTACTCTCCCCACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR GCA 72 bp | CTCCTTAGGCACCAAGGTGGACTTGGGTGGAATCATTaGCTCTCTACCAAAGGTAGATACAAAGAGTTGATC | + |
|
Preference number: 3 (lower is better) Translates to: LLRHQGGLGWNH*LSTKGRYKELI Trigger: GATCAACTCTTTGTATCTACCTTTGGTAGAGAGGCAATGATTCCACCCAAGTCCACCTTGGTGCCTAAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR CCA 72 bp | TTTCACTTCCTTTCTATAGACCACAGTTCATGGCAATaGGTAGACATGGTACTGACAGCTCACGCTCACGCT | + |
|
Preference number: 3 (lower is better) Translates to: FHFLSIDHSSWQ*VDMVLTAHAHA Trigger: AGCGTGAGCGTGAGCTGTCAGTACCATGTCTACCCATTGCCATGAACTGTGGTCTATAGAAAGGAAGTGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| 3UTR TCA 72 bp | ATAGAAACAGTCTATCTTTGCCTTCTCTACCTGGGGTaGCTAGAAACAGTCTCAGAGTATGCAGGGAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: IETVYLCLLYLG*LETVSEYAGKG Trigger: TCCCTTCCCTGCATACTCTGAGACTGTTTCTAGTCACCCCAGGTAGAGAAGGCAAAGATAGACTGTTTCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR CCA 72 bp | TTTACCTTTCACTTCCTTTCTATAGACCACAGTTCATaGCAATGGGTAGACATGGTACTGACAGCTCACGCT | + |
|
Preference number: 3 (lower is better) Translates to: FTFHFLSIDHSS*QWVDMVLTAHA Trigger: AGCGTGAGCTGTCAGTACCATGTCTACCCATTGCCATGAACTGTGGTCTATAGAAAGGAAGTGAAAGGTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR CCA 90 bp | CCCAAGGGACCCCTGGCCAGCAAGTGGGGGCTGGCCTGTCTCTGCCAGACACCCCATCGCTCCTTGGGATaGCCCACACGCTCCAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PKGPLASKWGLACLCQTPHRSLG*PTRSRF Trigger: AAACCTGGAGCGTGTGGGCCATCCCAAGGAGCGATG...GGGTGTCTGGCAGAGACAGGCCAGCCCCCACTTGCTGGCCAGGGGTCCCTTGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR GCA 90 bp | GGCAGAGTCAGGGCAACCAGCAGCTATTCAACAGCCCAGCCCCTCCCCTGGAGTGCATGGGCTGCCTCCTaGTCCACCAGGGGTTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GRVRATSSYSTAQPLPWSAWAAS*STRGFP Trigger: CGGGAAACCCCTGGTGGAGCAGGAGGCAGCCCATGC...ACTCCAGGGGAGGGGCTGGGCTGTTGAATAGCTGCTGGTTGCCCTGACTCTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS-3UTR CCA 90 bp | CCCAAGGGACCCCTGGCCAGCAAGTGGGGGCTGGCCTGTCTCTGCCAGACACCCCTCCTCCCCAGGAGTTaGAAGGTGGTCCCTGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: PKGPLASKWGLACLCQTPLLPRS*KVVPDH Trigger: ATGATCAGGGACCACCTTCCAACTCCTGGGGAGGAG...GGGTGTCTGGCAGAGACAGGCCAGCCCCCACTTGCTGGCCAGGGGTCCCTTGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR GCA 90 bp | CCCAAGGGACCCCTGGCCAGCAAGTGGGGGCTGGCCTGTCTCTGCCAGACACCCTCCCTCCTGCAATCATaGCTACAGACTTCACCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PKGPLASKWGLACLCQTPSLLQS*LQTSPS Trigger: GGACGGTGAAGTCTGTAGGCATGATTGCAGGAGGGA...GGGTGTCTGGCAGAGACAGGCCAGCCCCCACTTGCTGGCCAGGGGTCCCTTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR CCA 90 bp | CCCAAGGGACCCCTGGCCAGCAAGTGGGGGCTGGCCTGTCTCTGCCAGACACCCCATTTTCCCTCCAGCTaGAAACTTGGGATGGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PKGPLASKWGLACLCQTPHFPSS*KLGMGV Trigger: GACACCCATCCCAAGTTTCCAGCTGGAGGGAAAATG...GGGTGTCTGGCAGAGACAGGCCAGCCCCCACTTGCTGGCCAGGGGTCCCTTGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR CCA 90 bp | CCCAAGGGACCCCTGGCCAGCAAGTGGGGGCTGGCCTGTCTCTGCCAGACACCCTCTTGTCTGCACGGATaGCAAACTTCCCTTTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PKGPLASKWGLACLCQTPSCLHG*QTSLCP Trigger: AGGGCAAAGGGAAGTTTGCCATCCGTGCAGACAAGA...GGGTGTCTGGCAGAGACAGGCCAGCCCCCACTTGCTGGCCAGGGGTCCCTTGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR TCA 90 bp | CAGCCCTGGGACAGCCCAGTCTGCATTTCCACAGACCACCACAAAGGGGCAGCACCTGCAGCATTGGGGTaGTGCCTGTCCCTCCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QPWDSPVCISTDHHKGAAPAALG*CLSLLQ Trigger: TTGCAGGAGGGACAGGCATCACCCCAATGCTGCAGG...TGCTGCCCCTTTGTGGTGGTCTGTGGAAATGCAGACTGGGCTGTCCCAGGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTGGGGAGAGTAGACTCTTCAGTGGAGTTGCCTGCAAGGTGCACGGTCACGCTGGGGTCCCCACCCTaGCTCTGCTGCTCCCTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CVGRVDSSVELPARCTVTLGSPP*LCCSLA Trigger: AGCTAGGGAGCAGCAGAGCCAGGGTGGGGACCCCAG...CGTGACCGTGCACCTTGCAGGCAACTCCACTGAAGAGTCTACTCTCCCCACACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS-3UTR TCA 90 bp | GGACCCCCAAGGTCTACCAAACTCTGTTGGGCTGACAACTTAGGGCACTCAAGACGGGGTTCTCGAGGGTaGTGGCCGGTGTGGAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: GPPRSTKLCWADNLGHSRRGSRG*WPVWSA Trigger: AGCGCTCCACACCGGCCATCACCCTCGAGAACCCCG...TCTTGAGTGCCCTAAGTTGTCAGCCCAACAGAGTTTGGTAGACCTTGGGGGTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR TCA 90 bp | GGCAGAGTCAGGGCAACCAGCAGCTATTCAACAGCCCAGCCCCTCCCCTGGAGTTGGGCACTTCCCCTCTaGGGTTTGATTCCTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GRVRATSSYSTAQPLPWSWALPL*GLIPPQ Trigger: CTGTGGAGGAATCAAACCTCAGAGGGGAAGTGCCCA...ACTCCAGGGGAGGGGCTGGGCTGTTGAATAGCTGCTGGTTGCCCTGACTCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS-3UTR TCA 90 bp | CTGACTCAGCTCATTAGTCACTGCAAGCTTCCTAGGAATGCTCTGGAGCAAGGCCGGGGTTCTCGAGGGTaGTGGCCGGTGTGGAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LTQLISHCKLPRNALEQGRGSRG*WPVWSA Trigger: AGCGCTCCACACCGGCCATCACCCTCGAGAACCCCG...GCCTTGCTCCAGAGCATTCCTAGGAAGCTTGCAGTGACTAATGAGCTGAGTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS-3UTR TCA 90 bp | TTAGGGCACTCAAGACTGCATGGAGTCGGGGGCAGTGTGTATAGTTTTGGAAGGCGGGGTTCTCGAGGGTaGTGGCCGGTGTGGAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGHSRLHGVGGSVYSFGRRGSRG*WPVWSA Trigger: AGCGCTCCACACCGGCCATCACCCTCGAGAACCCCG...CCTTCCAAAACTATACACACTGCCCCCGACTCCATGCAGTCTTGAGTGCCCTAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR GCA 90 bp | GCACAGCTCCTCCACAGCACTGTGAACTCAGCCCACAGCTTATGCAAGTGCATGGGAAGGCCCAGGATGTaGTGGGGTGAAGGGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AQLLHSTVNSAHSLCKCMGRPRM*WGEGRA Trigger: TGCCCTCCCTTCACCCCAGCACATCCTGGGCCTTCC...CATGCACTTGCATAAGCTGTGGGCTGAGTTCACAGTGCTGTGGAGGAGCTGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS-3UTR GCA 90 bp | TTCATGGCAATGGGTAGACATGGTACTGACAGCTCACGCTCACGCTCTCCCTCCGGAAGGCCCAGGATGTaGTGGGGTGAAGGGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FMAMGRHGTDSSRSRSPSGRPRM*WGEGRA Trigger: TGCCCTCCCTTCACCCCAGCACATCCTGGGCCTTCC...GGAGGGAGAGCGTGAGCGTGAGCTGTCAGTACCATGTCTACCCATTGCCATGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR GCA 90 bp | GCACAGCTCCTCCACAGCACTGTGAACTCAGCCCACAGCTTATGCAAGTGCATGGCAGGCCACGAGAACTaGATGGGCTGCCTCCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: AQLLHSTVNSAHSLCKCMAGHEN*MGCLLL Trigger: GAGCAGGAGGCAGCCCATGCAGTTCTCGTGGCCTGC...CATGCACTTGCATAAGCTGTGGGCTGAGTTCACAGTGCTGTGGAGGAGCTGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS-3UTR GCA 90 bp | GTCATTCTCCAGATAGCTGCTCCCTGGCAAGCCCACCTCCCACTCCTTTCTTTCCACTGCTCCAAGGCCTaGCCCAAAGTGAGCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VILQIAAPWQAHLPLLSFHCSKA*PKVSQA Trigger: GGCCTGGCTCACTTTGGGGCAGGCCTTGGAGCAGTG...GAAAGAAAGGAGTGGGAGGTGGGCTTGCCAGGGAGCAGCTATCTGGAGAATGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS-3UTR CCA 90 bp | TGGCCAGCAAGTGGGGGCTGGCCTGTCTCTGCCAGACACCCTCCTAAGAAAACCCTCCTCCCCAGGAGTTaGAAGGTGGTCCCTGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: WPASGGWPVSARHPPKKTLLPRS*KVVPDH Trigger: ATGATCAGGGACCACCTTCCAACTCCTGGGGAGGAG...GGTTTTCTTAGGAGGGTGTCTGGCAGAGACAGGCCAGCCCCCACTTGCTGGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR TCA 90 bp | TTCATGGCAATGGGTAGACATGGTACTGACAGCTCACGCTCACGCTCTCCCTCCCCTGCAGCATTGGGGTaGTGCCTGTCCCTCCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FMAMGRHGTDSSRSRSPSPAALG*CLSLLQ Trigger: TTGCAGGAGGGACAGGCATCACCCCAATGCTGCAGG...GGAGGGAGAGCGTGAGCGTGAGCTGTCAGTACCATGTCTACCCATTGCCATGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR TCA 90 bp | GGGCACTCAAGACTGCATGGAGTCGGGGGCAGTGTGTATAGTTTTGGAAGGGTCCCTGCAGCATTGGGGTaGTGCCTGTCCCTCCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GHSRLHGVGGSVYSFGRVPAALG*CLSLLQ Trigger: TTGCAGGAGGGACAGGCATCACCCCAATGCTGCAGG...GACCCTTCCAAAACTATACACACTGCCCCCGACTCCATGCAGTCTTGAGTGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR TCA 90 bp | GAGACTTTGAGTATACGCCACCATGTCCCACGTGGCTGTGCTGTAGGTCAGACCAGGCCTGCCCCAAAGTaGGCCAGGCCCAAGGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: ETLSIRHHVPRGCAVGQTRPAPK*ARPKEI Trigger: TATCTCCTTGGGCCTGGCTCACTTTGGGGCAGGCCT...GGTCTGACCTACAGCACAGCCACGTGGGACATGGTGGCGTATACTCAAAGTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS-3UTR GCA 90 bp | CCTTCAGACACCACACCCAGTGCTCCACTGACTCACACACACATGGCTTGGCCAACCAGGGGTTTCCCGTaGTCACCATCAGGGGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PSDTTPSAPLTHTHMAWPTRGFP*SPSGAL Trigger: CAAAGCCCCTGATGGTGAGCACGGGAAACCCCTGGT...TGGCCAAGCCATGTGTGTGTGAGTCAGTGGAGCACTGGGTGTGGTGTCTGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS-3UTR CCA 90 bp | GCACAGCTCCTCCACAGCACTGTGAACTCAGCCCACAGCTTATGCAAGTGCATGCAGCCTGGGGCAGTGTaGGAGACCAGGAAGCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: AQLLHSTVNSAHSLCKCMQPGAV*ETRKQG Trigger: ACCTTGCTTCCTGGTCTCCCACACTGCCCCAGGCTG...CATGCACTTGCATAAGCTGTGGGCTGAGTTCACAGTGCTGTGGAGGAGCTGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR CAA 72 bp | GTGAAGTGTGTGGGGAGAGTAGACTCTTCAGTGGAGTaGCCTGCAAGGTGCACGGTCACGAGTGGGCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: VKCVGRVDSSVE*PARCTVTSGPM Trigger: CATGGGCCCACTCGTGACCGTGCACCTTGCAGGCAACTCCACTGAAGAGTCTACTCTCCCCACACACTTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS-3UTR GCA 90 bp | CTGACTCAGCTCATTAGTCACTGCAAGCTTCCTAGGAATGCTCTGGAGCAAGGCGAGAACTGCATGGGCTaGCTCCTGCTCCACCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LTQLISHCKLPRNALEQGENCMG*LLLHQG Trigger: CCCCTGGTGGAGCAGGAGGCAGCCCATGCAGTTCTC...GCCTTGCTCCAGAGCATTCCTAGGAAGCTTGCAGTGACTAATGAGCTGAGTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS-3UTR CCA 90 bp | GAGACTTTGAGTATACGCCACCATGTCCCACGTGGCTGTGCTGTAGGTCAGACCAGGCCCAGGATGTGCTaGGGTGAAGGGAGGGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ETLSIRHHVPRGCAVGQTRPRMC*GEGRAN Trigger: ATTTGCCCTCCCTTCACCCCAGCACATCCTGGGCCT...GGTCTGACCTACAGCACAGCCACGTGGGACATGGTGGCGTATACTCAAAGTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS-3UTR CCA 90 bp | AGCATTCTGACAGTGCACGGTACACAGGCCAGGCTCACAGGGCCTTTTTGTATGACTTCTCTGCCAGCCTaGGGCAGTGTGGGAGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SILTVHGTQARLTGPFCMTSLPA*GSVGDQ Trigger: CTGGTCTCCCACACTGCCCCAGGCTGGCAGAGAAGT...CATACAAAAAGGCCCTGTGAGCCTGGCCTGTGTACCGTGCACTGTCAGAATGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR CAA 72 bp | CCATGCTGGGGTGGCTTCTTGCCGATGCGGCTACTTTaGAGTCACCAGGTCCCAGTAAGAGACCCTCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: PCWGGFLPMRLL*SHQVPVRDPHQ Trigger: CTGATGAGGGTCTCTTACTGGGACCTGGTGACTCAAAAGTAGCCGCATCGGCAAGAAGCCACCCCAGCATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS-3UTR TCA 90 bp | GCTGACAACTTAGGGCACTCAAGACTGCATGGAGTCGGGGGCAGTGTGTATAGTCAGGATGTGCTGGGGTaGAGGGAGGGCAAATCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ADNLGHSRLHGVGGSVYSQDVLG*REGKSE Trigger: TTCCGATTTGCCCTCCCTTCACCCCAGCACATCCTG...ACTATACACACTGCCCCCGACTCCATGCAGTCTTGAGTGCCCTAAGTTGTCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR TCA 90 bp | TGTGTGGGGAGAGTAGACTCTTCAGTGGAGTTGCCTGCAAGGTGCACGGTCACGTTCCCCTCTGAGGTTTaGTTCCTCCACAGCCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: CVGRVDSSVELPARCTVTFPSEV*FLHSHE Trigger: CTCATGGCTGTGGAGGAATCAAACCTCAGAGGGGAA...CGTGACCGTGCACCTTGCAGGCAACTCCACTGAAGAGTCTACTCTCCCCACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS-3UTR GCA 90 bp | AACTTAGGGCACTCAAGACTGCATGGAGTCGGGGGCAGTGTGTATAGTTTTGGAGGAAGGCCCAGGATGTaGTGGGGTGAAGGGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NLGHSRLHGVGGSVYSFGGRPRM*WGEGRA Trigger: TGCCCTCCCTTCACCCCAGCACATCCTGGGCCTTCC...TCCAAAACTATACACACTGCCCCCGACTCCATGCAGTCTTGAGTGCCCTAAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR GCA 90 bp | AGCCTTTGTCCTAGCCCTGGGAAACCAGCCCTGGGACAGCCCAGTCTGCATTTCGATGCCTGTCCCTCCTaGAATCATGCCTACAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: SLCPSPGKPALGQPSLHFDACPS*NHAYRL Trigger: AAGTCTGTAGGCATGATTGCAGGAGGGACAGGCATC...GAAATGCAGACTGGGCTGTCCCAGGGCTGGTTTCCCAGGGCTAGGACAAAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGCACAGCTCCTCCACAGCACTGTGAACTCAGCCCACAGCTTATGCAAGTGATAAGAGGACTTCTCTaGCAGCCTGGGGCAGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSTAPPQHCELSPQLMQVIRGLL*QPGAVW Trigger: CCACACTGCCCCAGGCTGGCAGAGAAGTCCTCTTAT...CACTTGCATAAGCTGTGGGCTGAGTTCACAGTGCTGTGGAGGAGCTGTGCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS-3UTR CCA 90 bp | GGACCCCCAAGGTCTACCAAACTCTGTTGGGCTGACAACTTAGGGCACTCAAGAAGGCCCAGGATGTGCTaGGGTGAAGGGAGGGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GPPRSTKLCWADNLGHSRRPRMC*GEGRAN Trigger: ATTTGCCCTCCCTTCACCCCAGCACATCCTGGGCCT...TCTTGAGTGCCCTAAGTTGTCAGCCCAACAGAGTTTGGTAGACCTTGGGGGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR CCA 90 bp | CCAGCAAGTGGGGGCTGGCCTGTCTCTGCCAGACACCCTCCTAAGAAAACCTTTGGCAAACTGGATCATTaGTGGGGGTCCACACATCAG | + |
|
Preference number: 4 (lower is better) Translates to: PASGGWPVSARHPPKKTFGKLDH*WGSTHQ Trigger: CTGATGTGTGGACCCCCACCAATGATCCAGTTTGCC...AAAGGTTTTCTTAGGAGGGTGTCTGGCAGAGACAGGCCAGCCCCCACTTGCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| 3UTR CAA 72 bp | ATCCTCCTGCTCCCACTTTCCCTGACTGCTGAGACTTaGAGTATACGCCACCATGTCCCACGTGGCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ILLLPLSLTAET*SIRHHVPRGCA Trigger: AGCACAGCCACGTGGGACATGGTGGCGTATACTCAAAGTCTCAGCAGTCAGGGAAAGTGGGAGCAGGAGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR CAA 72 bp | TATGTGTGGGCCTTGTGTCTGGATCTTAAGGGCCTGTaGCTGCTTCTGCGTGGGCCACGGTGGTACTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: YVWALCLDLKGL*LLLRGPRWYWI Trigger: TATCCAGTACCACCGTGGCCCACGCAGAAGCAGCAACAGGCCCTTAAGATCCAGACACAAGGCCCACACATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS-3UTR TCA 90 bp | CAGCCCTGGGACAGCCCAGTCTGCATTTCCACAGACCACCACAAAGGGGCAGCAATGTTTTCCAGGTACTaGGACATTTTCCCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QPWDSPVCISTDHHKGAAMFSRY*DIFPPA Trigger: AGCTGGAGGGAAAATGTCTCAGTACCTGGAAAACAT...TGCTGCCCCTTTGTGGTGGTCTGTGGAAATGCAGACTGGGCTGTCCCAGGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS-3UTR GCA 90 bp | CCAGCAAGTGGGGGCTGGCCTGTCTCTGCCAGACACCCTCCTAAGAAAACCTTTGATGCCTGTCCCTCCTaGAATCATGCCTACAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: PASGGWPVSARHPPKKTFDACPS*NHAYRL Trigger: AAGTCTGTAGGCATGATTGCAGGAGGGACAGGCATC...AAAGGTTTTCTTAGGAGGGTGTCTGGCAGAGACAGGCCAGCCCCCACTTGCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR CCA 90 bp | TGTGTGGGGAGAGTAGACTCTTCAGTGGAGTTGCCTGCAAGGTGCACGGTCACGTCTTGTCTGCACGGATaGCAAACTTCCCTTTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CVGRVDSSVELPARCTVTSCLHG*QTSLCP Trigger: AGGGCAAAGGGAAGTTTGCCATCCGTGCAGACAAGA...CGTGACCGTGCACCTTGCAGGCAACTCCACTGAAGAGTCTACTCTCCCCACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS-3UTR CCA 90 bp | CCAGCAAGTGGGGGCTGGCCTGTCTCTGCCAGACACCCTCCTAAGAAAACCTTTTCTTGTCTGCACGGATaGCAAACTTCCCTTTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PASGGWPVSARHPPKKTFSCLHG*QTSLCP Trigger: AGGGCAAAGGGAAGTTTGCCATCCGTGCAGACAAGA...AAAGGTTTTCTTAGGAGGGTGTCTGGCAGAGACAGGCCAGCCCCCACTTGCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR CCA 90 bp | GGGCACTCAAGACTGCATGGAGTCGGGGGCAGTGTGTATAGTTTTGGAAGGGTCCCAGGAGTTGGAAGGTaGTCCCTGATCATCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GHSRLHGVGGSVYSFGRVPGVGR*SLIISS Trigger: TGAGGAGATGATCAGGGACCACCTTCCAACTCCTGG...GACCCTTCCAAAACTATACACACTGCCCCCGACTCCATGCAGTCTTGAGTGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR CCA 90 bp | CCAGCAAGTGGGGGCTGGCCTGTCTCTGCCAGACACCCTCCTAAGAAAACCTTTCACACGCTCCAGGTTTaGCAAACAGGCAAACTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PASGGWPVSARHPPKKTFHTLQV*QTGKLD Trigger: ATCCAGTTTGCCTGTTTGCCAAACCTGGAGCGTGTG...AAAGGTTTTCTTAGGAGGGTGTCTGGCAGAGACAGGCCAGCCCCCACTTGCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR CCA 90 bp | CATGGTACTGACAGCTCACGCTCACGCTCTCCCTCCCTCTCTCTTCCTCTTCTCCACACGCTCCAGGTTTaGCAAACAGGCAAACTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: HGTDSSRSRSPSLSLPLLHTLQV*QTGKLD Trigger: ATCCAGTTTGCCTGTTTGCCAAACCTGGAGCGTGTG...GAGAAGAGGAAGAGAGAGGGAGGGAGAGCGTGAGCGTGAGCTGTCAGTACCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR CCA 90 bp | TTAGGGCACTCAAGACTGCATGGAGTCGGGGGCAGTGTGTATAGTTTTGGAAGGCATCGCTCCTTGGGATaGCCCACACGCTCCAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LGHSRLHGVGGSVYSFGRHRSLG*PTRSRF Trigger: AAACCTGGAGCGTGTGGGCCATCCCAAGGAGCGATG...CCTTCCAAAACTATACACACTGCCCCCGACTCCATGCAGTCTTGAGTGCCCTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR TCA 90 bp | GGGCACTCAAGACTGCATGGAGTCGGGGGCAGTGTGTATAGTTTTGGAAGGGTCCTGTGTACCAGAGCTTaGAGCGAGCAGAATGTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: GHSRLHGVGGSVYSFGRVLCTRA*SEQNVR Trigger: ACGAACATTCTGCTCGCTTCAAGCTCTGGTACACAG...GACCCTTCCAAAACTATACACACTGCCCCCGACTCCATGCAGTCTTGAGTGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR TCA 90 bp | GCTACTTTTGAGTCACCAGGTCCCAGTAAGAGACCCTCATCAGGCACGCTCCTCCTGTGTACCAGAGCTTaGAGCGAGCAGAATGTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: ATFESPGPSKRPSSGTLLLCTRA*SEQNVR Trigger: ACGAACATTCTGCTCGCTTCAAGCTCTGGTACACAG...GAGGAGCGTGCCTGATGAGGGTCTCTTACTGGGACCTGGTGACTCAAAAGTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS-3UTR CCA 90 bp | GAGACTTTGAGTATACGCCACCATGTCCCACGTGGCTGTGCTGTAGGTCAGACCCATTTTCCCTCCAGCTaGAAACTTGGGATGGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ETLSIRHHVPRGCAVGQTHFPSS*KLGMGV Trigger: GACACCCATCCCAAGTTTCCAGCTGGAGGGAAAATG...GGTCTGACCTACAGCACAGCCACGTGGGACATGGTGGCGTATACTCAAAGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR CAA 72 bp | CACACCCAGTGCTCCACTGACTCACACACACATGGCTaGGCCATGTTGAATAGCTGCTCCTTCCCACTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: HTQCSTDSHTHG*AMLNSCSFPLK Trigger: TTTCAGTGGGAAGGAGCAGCTATTCAACATGGCCAAGCCATGTGTGTGTGAGTCAGTGGAGCACTGGGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS-3UTR TCA 90 bp | AACTTAGGGCACTCAAGACTGCATGGAGTCGGGGGCAGTGTGTATAGTTTTGGAGCCGGTGTGGAGCGCTaGAACAGCTTCATGAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: NLGHSRLHGVGGSVYSFGAGVER*NSFMKR Trigger: TCTCTTCATGAAGCTGTTTCAGCGCTCCACACCGGC...TCCAAAACTATACACACTGCCCCCGACTCCATGCAGTCTTGAGTGCCCTAAGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018186.16 |
||
| CDS-3UTR TCA 90 bp | CCAGCAAGTGGGGGCTGGCCTGTCTCTGCCAGACACCCTCCTAAGAAAACCTTTATGTTTTCCAGGTACTaGGACATTTTCCCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PASGGWPVSARHPPKKTFMFSRY*DIFPPA Trigger: AGCTGGAGGGAAAATGTCTCAGTACCTGGAAAACAT...AAAGGTTTTCTTAGGAGGGTGTCTGGCAGAGACAGGCCAGCCCCCACTTGCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR TCA 90 bp | GCTGACAACTTAGGGCACTCAAGACTGCATGGAGTCGGGGGCAGTGTGTATAGTTTGGAAGGTGGTCCCTaGTCATCTCCTCATTCACGA | + |
|
Preference number: 4 (lower is better) Translates to: ADNLGHSRLHGVGGSVYSLEGGP*SSPHSR Trigger: TCGTGAATGAGGAGATGATCAGGGACCACCTTCCAA...ACTATACACACTGCCCCCGACTCCATGCAGTCTTGAGTGCCCTAAGTTGTCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR TCA 90 bp | GGACCCCCAAGGTCTACCAAACTCTGTTGGGCTGACAACTTAGGGCACTCAAGATTGGAAGGTGGTCCCTaGTCATCTCCTCATTCACGA | + |
|
Preference number: 4 (lower is better) Translates to: GPPRSTKLCWADNLGHSRLEGGP*SSPHSR Trigger: TCGTGAATGAGGAGATGATCAGGGACCACCTTCCAA...TCTTGAGTGCCCTAAGTTGTCAGCCCAACAGAGTTTGGTAGACCTTGGGGGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR CCA 90 bp | CATGGTACTGACAGCTCACGCTCACGCTCTCCCTCCCTCTCTCTTCCTCTTCTCGACCCCGGAATTCAATaGTGTCTCCAATCTTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: HGTDSSRSRSPSLSLPLLDPGIQ*CLQSSC Trigger: ACATGAAGATTGGAGACACCATTGAATTCCGGGGTC...GAGAAGAGGAAGAGAGAGGGAGGGAGAGCGTGAGCGTGAGCTGTCAGTACCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR CCA 90 bp | TTAGGGCACTCAAGACTGCATGGAGTCGGGGGCAGTGTGTATAGTTTTGGAAGGCCAGGAGTTGGAAGGTaGTCCCTGATCATCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGHSRLHGVGGSVYSFGRPGVGR*SLIISS Trigger: TGAGGAGATGATCAGGGACCACCTTCCAACTCCTGG...CCTTCCAAAACTATACACACTGCCCCCGACTCCATGCAGTCTTGAGTGCCCTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR TCA 90 bp | TTCATGGCAATGGGTAGACATGGTACTGACAGCTCACGCTCACGCTCTCCCTCCATGTTTTCCAGGTACTaGGACATTTTCCCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FMAMGRHGTDSSRSRSPSMFSRY*DIFPPA Trigger: AGCTGGAGGGAAAATGTCTCAGTACCTGGAAAACAT...GGAGGGAGAGCGTGAGCGTGAGCTGTCAGTACCATGTCTACCCATTGCCATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR GCA 90 bp | TTAGGGCACTCAAGACTGCATGGAGTCGGGGGCAGTGTGTATAGTTTTGGAAGGGATGCCTGTCCCTCCTaGAATCATGCCTACAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: LGHSRLHGVGGSVYSFGRDACPS*NHAYRL Trigger: AAGTCTGTAGGCATGATTGCAGGAGGGACAGGCATC...CCTTCCAAAACTATACACACTGCCCCCGACTCCATGCAGTCTTGAGTGCCCTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR CCA 90 bp | TTAGGGCACTCAAGACTGCATGGAGTCGGGGGCAGTGTGTATAGTTTTGGAAGGCATTTTCCCTCCAGCTaGAAACTTGGGATGGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LGHSRLHGVGGSVYSFGRHFPSS*KLGMGV Trigger: GACACCCATCCCAAGTTTCCAGCTGGAGGGAAAATG...CCTTCCAAAACTATACACACTGCCCCCGACTCCATGCAGTCTTGAGTGCCCTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR CCA 90 bp | GCACAGCTCCTCCACAGCACTGTGAACTCAGCCCACAGCTTATGCAAGTGCATGGACCCCGGAATTCAATaGTGTCTCCAATCTTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: AQLLHSTVNSAHSLCKCMDPGIQ*CLQSSC Trigger: ACATGAAGATTGGAGACACCATTGAATTCCGGGGTC...CATGCACTTGCATAAGCTGTGGGCTGAGTTCACAGTGCTGTGGAGGAGCTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS-3UTR CCA 90 bp | AACTTAGGGCACTCAAGACTGCATGGAGTCGGGGGCAGTGTGTATAGTTTTGGAGGCAAACTGGATCATTaGTGGGGGTCCACACATCAG | + |
|
Preference number: 4 (lower is better) Translates to: NLGHSRLHGVGGSVYSFGGKLDH*WGSTHQ Trigger: CTGATGTGTGGACCCCCACCAATGATCCAGTTTGCC...TCCAAAACTATACACACTGCCCCCGACTCCATGCAGTCTTGAGTGCCCTAAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| 3UTR CAA 72 bp | CCCTCTCTGCCTGGGGCTAATAGAAACAGTCTATCTTaGCCTTCTCTACCTGGGGTGACTAGAAACAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PSLPGANRNSLS*PSLPGVTRNSL Trigger: GAGACTGTTTCTAGTCACCCCAGGTAGAGAAGGCAAAGATAGACTGTTTCTATTAGCCCCAGGCAGAGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| 3UTR CAA 72 bp | TGCTCCACTGACTCACACACACATGGCTTGGCCATGTaGAATAGCTGCTCCTTCCCACTGAAACTCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CSTDSHTHGLAM*NSCSFPLKLLL Trigger: AAGAAGGAGTTTCAGTGGGAAGGAGCAGCTATTCAACATGGCCAAGCCATGTGTGTGTGAGTCAGTGGAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS-3UTR GCA 90 bp | GTGATCTCTCTATCCCCTGATTTTTACACGAAGCAGGAGAAGGAAGAACACTCTTCCCTCCTGCAATCATaGCTACAGACTTCACCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VISLSPDFYTKQEKEEHSSLLQS*LQTSPS Trigger: GGACGGTGAAGTCTGTAGGCATGATTGCAGGAGGGA...AGAGTGTTCTTCCTTCTCCTGCTTCGTGTAAAAATCAGGGGATAGAGAGATCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS-3UTR CCA 90 bp | AACTTAGGGCACTCAAGACTGCATGGAGTCGGGGGCAGTGTGTATAGTTTTGGAGACCCCGGAATTCAATaGTGTCTCCAATCTTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: NLGHSRLHGVGGSVYSFGDPGIQ*CLQSSC Trigger: ACATGAAGATTGGAGACACCATTGAATTCCGGGGTC...TCCAAAACTATACACACTGCCCCCGACTCCATGCAGTCTTGAGTGCCCTAAGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR CAA 90 bp | CCCAAGGGACCCCTGGCCAGCAAGTGGGGGCTGGCCTGTCTCTGCCAGACACCCCCTCCAGCTGGAAACTaGGGATGGGTGTCCTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PKGPLASKWGLACLCQTPPPAGN*GWVSLK Trigger: CTTCAAGGACACCCATCCCAAGTTTCCAGCTGGAGG...GGGTGTCTGGCAGAGACAGGCCAGCCCCCACTTGCTGGCCAGGGGTCCCTTGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS TCA 90 bp | AGCAGCCATCCAACCCTCAGCACTGCTCCAAGGCCTGCCCCAAAGTaGGCCAGGCCCAAGGAGATAAGAGGACTTCTCTGCCAGCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SSHPTLSTAPRPAPK*ARPKEIRGLLCQPG Trigger: CCCAGGCTGGCAGAGAAGTCCTCTTATCTCCTTGGGCCTGGCTCACTTTGGGGCAGGCCTTGGAGCAGTGCTGAGGGTTGGATGGCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS CCA 90 bp | AAAGTGAGCCAGGCCCAAGGAGATAAGAGGACTTCTCTGCCAGCCTaGGGCAGTGTGGGAGACCAGGAAGCAAGGTCTGGGGTCCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: KVSQAQGDKRTSLPA*GSVGDQEARSGVPT Trigger: GGTGGGGACCCCAGACCTTGCTTCCTGGTCTCCCACACTGCCCCAGGCTGGCAGAGAAGTCCTCTTATCTCCTTGGGCCTGGCTCACTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS-3UTR CAA 90 bp | TGGCCAGCAAGTGGGGGCTGGCCTGTCTCTGCCAGACACCCTCCTAAGAAAACCGGACTGATGACCTCCTaGTCGATGAGCCTCAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: WPASGGWPVSARHPPKKTGLMTS*SMSLRG Trigger: CCCTCTGAGGCTCATCGACAAGGAGGTCATCAGTCC...GGTTTTCTTAGGAGGGTGTCTGGCAGAGACAGGCCAGCCCCCACTTGCTGGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR CAA 90 bp | GGCAGAGTCAGGGCAACCAGCAGCTATTCAACAGCCCAGCCCCTCCCCTGGAGTTCACCATCAGGGGCTTaGTCCACTGTGTACCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GRVRATSSYSTAQPLPWSSPSGA*STVYQS Trigger: GCTCTGGTACACAGTGGACAAAGCCCCTGATGGTGA...ACTCCAGGGGAGGGGCTGGGCTGTTGAATAGCTGCTGGTTGCCCTGACTCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS CCA 90 bp | GCCCACACGCTCCAGGTTTGGCAAACAGGCAAACTGGATCATTGGTaGGGGTCCACACATCAGTATCAGCGGCTCCTCCCCAGGAGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: AHTLQVWQTGKLDHW*GSTHQYQRLLPRSW Trigger: CCAACTCCTGGGGAGGAGCCGCTGATACTGATGTGTGGACCCCCACCAATGATCCAGTTTGCCTGTTTGCCAAACCTGGAGCGTGTGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS CCA 90 bp | ATGGCCCACACGCTCCAGGTTTGGCAAACAGGCAAACTGGATCATTaGTGGGGGTCCACACATCAGTATCAGCGGCTCCTCCCCAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: MAHTLQVWQTGKLDH*WGSTHQYQRLLPRS Trigger: ACTCCTGGGGAGGAGCCGCTGATACTGATGTGTGGACCCCCACCAATGATCCAGTTTGCCTGTTTGCCAAACCTGGAGCGTGTGGGCCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS CCA 90 bp | TCCTTGGGATGGCCCACACGCTCCAGGTTTGGCAAACAGGCAAACTaGATCATTGGTGGGGGTCCACACATCAGTATCAGCGGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLGWPTRSRFGKQAN*IIGGGPHISISGSS Trigger: GGAGGAGCCGCTGATACTGATGTGTGGACCCCCACCAATGATCCAGTTTGCCTGTTTGCCAAACCTGGAGCGTGTGGGCCATCCCAAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR CAA 90 bp | GCTGACAACTTAGGGCACTCAAGACTGCATGGAGTCGGGGGCAGTGTGTATAGTGTGAAGCATCGCTCCTaGGGATGGCCCACACGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ADNLGHSRLHGVGGSVYSVKHRS*GWPTRS Trigger: GGAGCGTGTGGGCCATCCCAAGGAGCGATGCTTCAC...ACTATACACACTGCCCCCGACTCCATGCAGTCTTGAGTGCCCTAAGTTGTCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR CAA 90 bp | GGACCCCCAAGGTCTACCAAACTCTGTTGGGCTGACAACTTAGGGCACTCAAGAGTGAAGCATCGCTCCTaGGGATGGCCCACACGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GPPRSTKLCWADNLGHSRVKHRS*GWPTRS Trigger: GGAGCGTGTGGGCCATCCCAAGGAGCGATGCTTCAC...TCTTGAGTGCCCTAAGTTGTCAGCCCAACAGAGTTTGGTAGACCTTGGGGGTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS TCA 90 bp | TCCCGTGCTCACCATCAGGGGCTTTGTCCACTGTGTACCAGAGCTTaGAGCGAGCAGAATGTTCGTTCCTCAGTTCCTCCAGCTCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SRAHHQGLCPLCTRA*SEQNVRSSVPPAQA Trigger: GGCCTGAGCTGGAGGAACTGAGGAACGAACATTCTGCTCGCTTCAAGCTCTGGTACACAGTGGACAAAGCCCCTGATGGTGAGCACGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS GCA 90 bp | ACTACACAGAAGCAGCCATCCAACCCTCAGCACTGCTCCAAGGCCTaGCCCAAAGTGAGCCAGGCCCAAGGAGATAAGAGGACTTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TTQKQPSNPQHCSKA*PKVSQAQGDKRTSL Trigger: CAGAGAAGTCCTCTTATCTCCTTGGGCCTGGCTCACTTTGGGGCAGGCCTTGGAGCAGTGCTGAGGGTTGGATGGCTGCTTCTGTGTAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS CCA 90 bp | GAAGGTGAAGCATCGCTCCTTGGGATGGCCCACACGCTCCAGGTTTaGCAAACAGGCAAACTGGATCATTGGTGGGGGTCCACACATCAG | + |
|
Preference number: 5 (lower is better) Translates to: EGEASLLGMAHTLQV*QTGKLDHWWGSTHQ Trigger: CTGATGTGTGGACCCCCACCAATGATCCAGTTTGCCTGTTTGCCAAACCTGGAGCGTGTGGGCCATCCCAAGGAGCGATGCTTCACCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR CAA 90 bp | GAGACTTTGAGTATACGCCACCATGTCCCACGTGGCTGTGCTGTAGGTCAGACCGGACTGATGACCTCCTaGTCGATGAGCCTCAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ETLSIRHHVPRGCAVGQTGLMTS*SMSLRG Trigger: CCCTCTGAGGCTCATCGACAAGGAGGTCATCAGTCC...GGTCTGACCTACAGCACAGCCACGTGGGACATGGTGGCGTATACTCAAAGTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS-3UTR CAA 90 bp | GGACCCCCAAGGTCTACCAAACTCTGTTGGGCTGACAACTTAGGGCACTCAAGAACACGGTGTGGTCGTTaGGGTCCTTCAGGACGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GPPRSTKLCWADNLGHSRTRCGR*GPSGRL Trigger: GAGCCGTCCTGAAGGACCCAAACGACCACACCGTGT...TCTTGAGTGCCCTAAGTTGTCAGCCCAACAGAGTTTGGTAGACCTTGGGGGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR CAA 90 bp | CCAGCAAGTGGGGGCTGGCCTGTCTCTGCCAGACACCCTCCTAAGAAAACCTTTCCACACGCTCCAGGTTaGGCAAACAGGCAAACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PASGGWPVSARHPPKKTFPHAPG*ANRQTG Trigger: TCCAGTTTGCCTGTTTGCCAAACCTGGAGCGTGTGG...AAAGGTTTTCTTAGGAGGGTGTCTGGCAGAGACAGGCCAGCCCCCACTTGCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS TCA 90 bp | ACATCAGTATCAGCGGCTCCTCCCCAGGAGTTGGAAGGTGGTCCCTaGTCATCTCCTCATTCACGAAGCCCTGGCTATAGTCCCAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: TSVSAAPPQELEGGP*SSPHSRSPGYSPRH Trigger: ATGCCTGGGACTATAGCCAGGGCTTCGTGAATGAGGAGATGATCAGGGACCACCTTCCAACTCCTGGGGAGGAGCCGCTGATACTGATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR CAA 90 bp | GCTGACAACTTAGGGCACTCAAGACTGCATGGAGTCGGGGGCAGTGTGTATAGTGGACTGATGACCTCCTaGTCGATGAGCCTCAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ADNLGHSRLHGVGGSVYSGLMTS*SMSLRG Trigger: CCCTCTGAGGCTCATCGACAAGGAGGTCATCAGTCC...ACTATACACACTGCCCCCGACTCCATGCAGTCTTGAGTGCCCTAAGTTGTCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR CAA 90 bp | GGGCACTCAAGACTGCATGGAGTCGGGGGCAGTGTGTATAGTTTTGGAAGGGTCCGAGAGGTAGATGTGTaGGCCAATAGGAAGGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GHSRLHGVGGSVYSFGRVREVDV*ANRKAQ Trigger: CTGGGCCTTCCTATTGGCCAACACATCTACCTCTCG...GACCCTTCCAAAACTATACACACTGCCCCCGACTCCATGCAGTCTTGAGTGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR CAA 90 bp | AGCTCTAGAAATCTGGGACTTGCCAGGGCCTCCCTGGGGTTACAGAGCAGTGAACCTCCAGCTGGAAACTaGGGATGGGTGTCCTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSRNLGLARASLGLQSSEPPAGN*GWVSLK Trigger: CTTCAAGGACACCCATCCCAAGTTTCCAGCTGGAGG...TTCACTGCTCTGTAACCCCAGGGAGGCCCTGGCAAGTCCCAGATTTCTAGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS-3UTR CAA 90 bp | TTCATGGCAATGGGTAGACATGGTACTGACAGCTCACGCTCACGCTCTCCCTCCCCTCCAGCTGGAAACTaGGGATGGGTGTCCTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FMAMGRHGTDSSRSRSPSPPAGN*GWVSLK Trigger: CTTCAAGGACACCCATCCCAAGTTTCCAGCTGGAGG...GGAGGGAGAGCGTGAGCGTGAGCTGTCAGTACCATGTCTACCCATTGCCATGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS TCA 90 bp | TATAGTCCCAGGCATCAGGGGCTTTGTCCACTGTGTACCAGAGCTTaGAGCGAGCAGAATGTTCGTTCCTCAGTTCCTCCAGCTCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: YSPRHQGLCPLCTRA*SEQNVRSSVPPAQA Trigger: GGCCTGAGCTGGAGGAACTGAGGAACGAACATTCTGCTCGCTTCAAGCTCTGGTACACAGTGGACAAAGCCCCTGATGCCTGGGACTATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR CAA 90 bp | AGCATTCTGACAGTGCACGGTACACAGGCCAGGCTCACAGGGCCTTTTTGTATGCGAGAGGTAGATGTGTaGGCCAATAGGAAGGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SILTVHGTQARLTGPFCMREVDV*ANRKAQ Trigger: CTGGGCCTTCCTATTGGCCAACACATCTACCTCTCG...CATACAAAAAGGCCCTGTGAGCCTGGCCTGTGTACCGTGCACTGTCAGAATGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS-3UTR CAA 90 bp | AACTTAGGGCACTCAAGACTGCATGGAGTCGGGGGCAGTGTGTATAGTTTTGGAACACGGTGTGGTCGTTaGGGTCCTTCAGGACGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: NLGHSRLHGVGGSVYSFGTRCGR*GPSGRL Trigger: GAGCCGTCCTGAAGGACCCAAACGACCACACCGTGT...TCCAAAACTATACACACTGCCCCCGACTCCATGCAGTCTTGAGTGCCCTAAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR CAA 90 bp | CCTTCAGACACCACACCCAGTGCTCCACTGACTCACACACACATGGCTTGGCCAACTGTGTACCAGAGCTaGAAGCGAGCAGAATGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: PSDTTPSAPLTHTHMAWPTVYQS*KRAECS Trigger: CGAACATTCTGCTCGCTTCAAGCTCTGGTACACAGT...TGGCCAAGCCATGTGTGTGTGAGTCAGTGGAGCACTGGGTGTGGTGTCTGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS-3UTR CAA 90 bp | GGGCACTCAAGACTGCATGGAGTCGGGGGCAGTGTGTATAGTTTTGGAAGGGTCACTGTGTACCAGAGCTaGAAGCGAGCAGAATGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: GHSRLHGVGGSVYSFGRVTVYQS*KRAECS Trigger: CGAACATTCTGCTCGCTTCAAGCTCTGGTACACAGT...GACCCTTCCAAAACTATACACACTGCCCCCGACTCCATGCAGTCTTGAGTGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS-3UTR CAA 90 bp | AACTTAGGGCACTCAAGACTGCATGGAGTCGGGGGCAGTGTGTATAGTTTTGGACAGGCATCAGGGGCTTaGTCCACTGTGTACCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: NLGHSRLHGVGGSVYSFGQASGA*STVYQS Trigger: GCTCTGGTACACAGTGGACAAAGCCCCTGATGCCTG...TCCAAAACTATACACACTGCCCCCGACTCCATGCAGTCTTGAGTGCCCTAAGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS CCA 90 bp | CACGGATGGCAAACTTCCCTTTGCCCTGGTAGACCAGTAGCCCATTaGGACCCCGGAATTCAATGGTGTCTCCAATCTTCATGTTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: HGWQTSLCPGRPVAH*DPGIQWCLQSSCFP Trigger: TGGAAAACATGAAGATTGGAGACACCATTGAATTCCGGGGTCCCAATGGGCTACTGGTCTACCAGGGCAAAGGGAAGTTTGCCATCCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018186.16 ENSMUST00000162178.8 ENSMUST00000162834.3 |
||
| CDS-3UTR CAA 90 bp | GTGATCTCTCTATCCCCTGATTTTTACACGAAGCAGGAGAAGGAAGAACACTCTACACGGTGTGGTCGTTaGGGTCCTTCAGGACGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VISLSPDFYTKQEKEEHSTRCGR*GPSGRL Trigger: GAGCCGTCCTGAAGGACCCAAACGACCACACCGTGT...AGAGTGTTCTTCCTTCTCCTGCTTCGTGTAAAAATCAGGGGATAGAGAGATCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS-3UTR CAA 90 bp | TTAGGGCACTCAAGACTGCATGGAGTCGGGGGCAGTGTGTATAGTTTTGGAAGGACTGTGTACCAGAGCTaGAAGCGAGCAGAATGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: LGHSRLHGVGGSVYSFGRTVYQS*KRAECS Trigger: CGAACATTCTGCTCGCTTCAAGCTCTGGTACACAGT...CCTTCCAAAACTATACACACTGCCCCCGACTCCATGCAGTCTTGAGTGCCCTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS GCA 72 bp | CATGAGCAGGCCACGAGAACTGCATGGGCTGCCTCCTaGTCCACCAGGGGTTTCCCGTGCTCACCATCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: HEQATRTAWAAS*STRGFPCSPSG Trigger: CCCTGATGGTGAGCACGGGAAACCCCTGGTGGAGCAGGAGGCAGCCCATGCAGTTCTCGTGGCCTGCTCATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS CCA 72 bp | CAGGCCCAAGGAGATAAGAGGACTTCTCTGCCAGCCTaGGGCAGTGTGGGAGACCAGGAAGCAAGGTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: QAQGDKRTSLPA*GSVGDQEARSG Trigger: CCCAGACCTTGCTTCCTGGTCTCCCACACTGCCCCAGGCTGGCAGAGAAGTCCTCTTATCTCCTTGGGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS TCA 72 bp | CCAACCCTCAGCACTGCTCCAAGGCCTGCCCCAAAGTaGGCCAGGCCCAAGGAGATAAGAGGACTTCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PTLSTAPRPAPK*ARPKEIRGLLC Trigger: GCAGAGAAGTCCTCTTATCTCCTTGGGCCTGGCTCACTTTGGGGCAGGCCTTGGAGCAGTGCTGAGGGTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS GCA 72 bp | CCAACTACACAGAAGCAGCCATCCAACCCTCAGCACTaGTCCAAGGCCTGCCCCAAAGTGAGCCAGGCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: PTTQKQPSNPQH*SKACPKVSQAQ Trigger: TTGGGCCTGGCTCACTTTGGGGCAGGCCTTGGAGCAGTGCTGAGGGTTGGATGGCTGCTTCTGTGTAGTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS CCA 72 bp | TGGGTCCTTCAGGACGGCTCGGATCACCTGCAGCATTaGGGTGATGCCTGTCCCTCCTGCAATCATGCCTAC | + |
|
Preference number: 6 (lower is better) Translates to: WVLQDGSDHLQH*GDACPSCNHAY Trigger: GTAGGCATGATTGCAGGAGGGACAGGCATCACCCCAATGCTGCAGGTGATCCGAGCCGTCCTGAAGGACCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018186.16 ENSMUST00000162178.8 ENSMUST00000162834.3 |
||
| CDS CAA 90 bp | GATGGCCCACACGCTCCAGGTTTGGCAAACAGGCAAACTGGATCATaGGTGGGGGTCCACACATCAGTATCAGCGGCTCCTCCCCAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: DGPHAPGLANRQTGS*VGVHTSVSAAPPQE Trigger: CTCCTGGGGAGGAGCCGCTGATACTGATGTGTGGACCCCCACCAATGATCCAGTTTGCCTGTTTGCCAAACCTGGAGCGTGTGGGCCATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS CAA 90 bp | GCCTCCTGCTCCACCAGGGGTTTCCCGTGCTCACCATCAGGGGCTTaGTCCACTGTGTACCAGAGCTTGAAGCGAGCAGAATGTTCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: ASCSTRGFPCSPSGA*STVYQSLKRAECSF Trigger: GAACGAACATTCTGCTCGCTTCAAGCTCTGGTACACAGTGGACAAAGCCCCTGATGGTGAGCACGGGAAACCCCTGGTGGAGCAGGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS CAA 72 bp | CTGATGACCTCCTTGTCGATGAGCCTCAGAGGGTACTaGATGTCGGGGTTCTCGAGGGTGATGGCCGGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LMTSLSMSLRGY*MSGFSRVMAGV Trigger: CACACCGGCCATCACCCTCGAGAACCCCGACATCAAGTACCCTCTGAGGCTCATCGACAAGGAGGTCATCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018186.16 ENSMUST00000162178.8 ENSMUST00000162834.3 |
||
| CDS CAA 72 bp | GGTTGGCAAAGAGCAGATAGCACACGGTGTGGTCGTTaGGGTCCTTCAGGACGGCTCGGATCACCTGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GWQRADSTRCGR*GPSGRLGSPAA Trigger: TGCTGCAGGTGATCCGAGCCGTCCTGAAGGACCCAAACGACCACACCGTGTGCTATCTGCTCTTTGCCAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018186.16 ENSMUST00000162178.8 ENSMUST00000162834.3 |
||
| CDS CAA 72 bp | AGCATCGCTCCTTGGGATGGCCCACACGCTCCAGGTTaGGCAAACAGGCAAACTGGATCATTGGTGGGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SIAPWDGPHAPG*ANRQTGSLVGV Trigger: GACCCCCACCAATGATCCAGTTTGCCTGTTTGCCAAACCTGGAGCGTGTGGGCCATCCCAAGGAGCGATGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS TCA 72 bp | TCAGCGGCTCCTCCCCAGGAGTTGGAAGGTGGTCCCTaGTCATCTCCTCATTCACGAAGCCCTGGCTATAGT | + |
|
Preference number: 6 (lower is better) Translates to: SAAPPQELEGGP*SSPHSRSPGYS Trigger: ACTATAGCCAGGGCTTCGTGAATGAGGAGATGATCAGGGACCACCTTCCAACTCCTGGGGAGGAGCCGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS GCA 72 bp | TGGACTTCTTGTCTGCACGGATGGCAAACTTCCCTTTaGCCTGGTAGACCAGTAGCCCATTGGGACCCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: WTSCLHGWQTSL*PGRPVAHWDPG Trigger: TCCGGGGTCCCAATGGGCTACTGGTCTACCAGGGCAAAGGGAAGTTTGCCATCCGTGCAGACAAGAAGTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018186.16 ENSMUST00000162178.8 ENSMUST00000162834.3 |
||
| CDS CCA 72 bp | GTTGGCAAAGAGCAGATAGCACACGGTGTGGTCGTTTaGGTCCTTCAGGACGGCTCGGATCACCTGCAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: VGKEQIAHGVVV*VLQDGSDHLQH Trigger: ATGCTGCAGGTGATCCGAGCCGTCCTGAAGGACCCAAACGACCACACCGTGTGCTATCTGCTCTTTGCCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018186.16 ENSMUST00000162178.8 ENSMUST00000162834.3 |
||
| CDS CCA 72 bp | CTCCAGGTTTGGCAAACAGGCAAACTGGATCATTGGTaGGGGTCCACACATCAGTATCAGCGGCTCCTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LQVWQTGKLDHW*GSTHQYQRLLP Trigger: GGGGAGGAGCCGCTGATACTGATGTGTGGACCCCCACCAATGATCCAGTTTGCCTGTTTGCCAAACCTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS CAA 72 bp | TCCACCAGGGGTTTCCCGTGCTCACCATCAGGGGCTTaGTCCACTGTGTACCAGAGCTTGAAGCGAGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: STRGFPCSPSGA*STVYQSLKRAE Trigger: TTCTGCTCGCTTCAAGCTCTGGTACACAGTGGACAAAGCCCCTGATGGTGAGCACGGGAAACCCCTGGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS CAA 90 bp | CCTCCTGCAATCATGCCTACAGACTTCACCGTCCTGACAACGGGGTaGGACTTCTTGTCTGCACGGATGGCAAACTTCCCTTTGCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PPAIMPTDFTVLTTG*DFLSARMANFPLPW Trigger: CCAGGGCAAAGGGAAGTTTGCCATCCGTGCAGACAAGAAGTCCAACCCCGTTGTCAGGACGGTGAAGTCTGTAGGCATGATTGCAGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018186.16 ENSMUST00000162178.8 ENSMUST00000162834.3 |
||
| CDS CAA 90 bp | TTCCCGTGCTCACCATCAGGGGCTTTGTCCACTGTGTACCAGAGCTaGAAGCGAGCAGAATGTTCGTTCCTCAGTTCCTCCAGCTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: FPCSPSGALSTVYQS*KRAECSFLSSSSSG Trigger: GCCTGAGCTGGAGGAACTGAGGAACGAACATTCTGCTCGCTTCAAGCTCTGGTACACAGTGGACAAAGCCCCTGATGGTGAGCACGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS TCA 72 bp | TCCCTCCTGCAATCATGCCTACAGACTTCACCGTCCTaGCAACGGGGTTGGACTTCTTGTCTGCACGGATGG | + |
|
Preference number: 6 (lower is better) Translates to: SLLQSCLQTSPS*QRGWTSCLHGW Trigger: CCATCCGTGCAGACAAGAAGTCCAACCCCGTTGTCAGGACGGTGAAGTCTGTAGGCATGATTGCAGGAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018186.16 ENSMUST00000162178.8 ENSMUST00000162834.3 |
||
| CDS GCA 72 bp | CTTCACCGTCCTGACAACGGGGTTGGACTTCTTGTCTaGACGGATGGCAAACTTCCCTTTGCCCTGGTAGAC | + |
|
Preference number: 6 (lower is better) Translates to: LHRPDNGVGLLV*TDGKLPFALVD Trigger: GTCTACCAGGGCAAAGGGAAGTTTGCCATCCGTGCAGACAAGAAGTCCAACCCCGTTGTCAGGACGGTGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018186.16 ENSMUST00000162178.8 ENSMUST00000162834.3 |
||
| CDS CCA 72 bp | ACGCTCCAGGTTTGGCAAACAGGCAAACTGGATCATTaGTGGGGGTCCACACATCAGTATCAGCGGCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: TLQVWQTGKLDH*WGSTHQYQRLL Trigger: GAGGAGCCGCTGATACTGATGTGTGGACCCCCACCAATGATCCAGTTTGCCTGTTTGCCAAACCTGGAGCGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS CCA 72 bp | TGGCCCACACGCTCCAGGTTTGGCAAACAGGCAAACTaGATCATTGGTGGGGGTCCACACATCAGTATCAGC | + |
|
Preference number: 6 (lower is better) Translates to: WPTRSRFGKQAN*IIGGGPHISIS Trigger: GCTGATACTGATGTGTGGACCCCCACCAATGATCCAGTTTGCCTGTTTGCCAAACCTGGAGCGTGTGGGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS CAA 72 bp | ACAGACTTCACCGTCCTGACAACGGGGTTGGACTTCTaGTCTGCACGGATGGCAAACTTCCCTTTGCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: TDFTVLTTGLDF*SARMANFPLPW Trigger: CCAGGGCAAAGGGAAGTTTGCCATCCGTGCAGACAAGAAGTCCAACCCCGTTGTCAGGACGGTGAAGTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018186.16 ENSMUST00000162178.8 ENSMUST00000162834.3 |
||
| CDS CAA 72 bp | CACGCTCCAGGTTTGGCAAACAGGCAAACTGGATCATaGGTGGGGGTCCACACATCAGTATCAGCGGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: HAPGLANRQTGS*VGVHTSVSAAP Trigger: AGGAGCCGCTGATACTGATGTGTGGACCCCCACCAATGATCCAGTTTGCCTGTTTGCCAAACCTGGAGCGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS CAA 72 bp | CAGGCATCAGGGGCTTTGTCCACTGTGTACCAGAGCTaGAAGCGAGCAGAATGTTCGTTCCTCAGTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: QASGALSTVYQS*KRAECSFLSSS Trigger: GGAGGAACTGAGGAACGAACATTCTGCTCGCTTCAAGCTCTGGTACACAGTGGACAAAGCCCCTGATGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS TCA 72 bp | AGGCATCAGGGGCTTTGTCCACTGTGTACCAGAGCTTaGAGCGAGCAGAATGTTCGTTCCTCAGTTCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RHQGLCPLCTRA*SEQNVRSSVPP Trigger: TGGAGGAACTGAGGAACGAACATTCTGCTCGCTTCAAGCTCTGGTACACAGTGGACAAAGCCCCTGATGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018186.16 ENSMUST00000162834.3 |
||
| CDS TCA 72 bp | CACCATCAGGGGCTTTGTCCACTGTGTACCAGAGCTTaGAGCGAGCAGAATGTTCGTTCCTCAGTTCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: HHQGLCPLCTRA*SEQNVRSSVPP Trigger: TGGAGGAACTGAGGAACGAACATTCTGCTCGCTTCAAGCTCTGGTACACAGTGGACAAAGCCCCTGATGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS CAA 72 bp | ATCATGCCTACAGACTTCACCGTCCTGACAACGGGGTaGGACTTCTTGTCTGCACGGATGGCAAACTTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: IMPTDFTVLTTG*DFLSARMANFP Trigger: AGGGAAGTTTGCCATCCGTGCAGACAAGAAGTCCAACCCCGTTGTCAGGACGGTGAAGTCTGTAGGCATGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018186.16 ENSMUST00000162178.8 ENSMUST00000162834.3 |
||
| CDS CAA 72 bp | TCACCATCAGGGGCTTTGTCCACTGTGTACCAGAGCTaGAAGCGAGCAGAATGTTCGTTCCTCAGTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SPSGALSTVYQS*KRAECSFLSSS Trigger: GGAGGAACTGAGGAACGAACATTCTGCTCGCTTCAAGCTCTGGTACACAGTGGACAAAGCCCCTGATGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162178.8 |
||
| CDS CCA 72 bp | CAAACTTCCCTTTGCCCTGGTAGACCAGTAGCCCATTaGGACCCCGGAATTCAATGGTGTCTCCAATCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: QTSLCPGRPVAH*DPGIQWCLQSS Trigger: TGAAGATTGGAGACACCATTGAATTCCGGGGTCCCAATGGGCTACTGGTCTACCAGGGCAAAGGGAAGTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000018186.16 ENSMUST00000162178.8 ENSMUST00000162834.3 |
||
| CDS CCA 72 bp | GGTAGACCAGTAGCCCATTGGGACCCCGGAATTCAATaGTGTCTCCAATCTTCATGTTTTCCAGGTACTGAG | + |
|
Preference number: 6 (lower is better) Translates to: GRPVAHWDPGIQ*CLQSSCFPGTE Trigger: CTCAGTACCTGGAAAACATGAAGATTGGAGACACCATTGAATTCCGGGGTCCCAATGGGCTACTGGTCTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018186.16 ENSMUST00000162178.8 ENSMUST00000162834.3 |
||
| CDS TCA 72 bp | TCAATGGTGTCTCCAATCTTCATGTTTTCCAGGTACTaGGACATTTTCCCTCCAGCTGGAAACTTGGGATGG | + |
|
Preference number: 6 (lower is better) Translates to: SMVSPIFMFSRY*DIFPPAGNLGW Trigger: CCATCCCAAGTTTCCAGCTGGAGGGAAAATGTCTCAGTACCTGGAAAACATGAAGATTGGAGACACCATTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000018186.16 ENSMUST00000162178.8 ENSMUST00000162834.3 |
||