Pregenerated sensors for CYB5R2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048065Ensembl transcript IDs: ENSMUST00000052438.8, ENSMUST00000208217.2
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TACAATTGGGTGAATGAACGTGGGAGTGTCCCTCCCTGGCCTGTTTaGGACGGAGTTTGGTCCCCTGTGGGTGAGATTCAAGGATATAGC | + |
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Preference number: 1 (lower is better) Translates to: YNWVNERGSVPPWPV*DGVWSPVGEIQGYS Trigger: GCTATATCCTTGAATCTCACCCACAGGGGACCAAACTCCGTCTCAAACAGGCCAGGGAGGGACACTCCCACGTTCATTCACCCAATTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052438.8 |
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| 3UTR CCA 90 bp | ATGCAAAGCAGTCCAGTTTATTCCGCTAAGCCATGGAGAAAGTCATaGAGAAAGTGGCTTCCTTCCCAGCCTCCAAACCTGGAAGCTCAA | + |
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Preference number: 1 (lower is better) Translates to: MQSSPVYSAKPWRKS*RKWLPSQPPNLEAQ Trigger: TTGAGCTTCCAGGTTTGGAGGCTGGGAAGGAAGCCACTTTCTCCATGACTTTCTCCATGGCTTAGCGGAATAAACTGGACTGCTTTGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| 3UTR CCA 90 bp | AGTCCAGTTTATTCCGCTAAGCCATGGAGAAAGTCATGGAGAAAGTaGCTTCCTTCCCAGCCTCCAAACCTGGAAGCTCAAAAATCACTT | + |
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Preference number: 1 (lower is better) Translates to: SPVYSAKPWRKSWRK*LPSQPPNLEAQKSL Trigger: AAGTGATTTTTGAGCTTCCAGGTTTGGAGGCTGGGAAGGAAGCCACTTTCTCCATGACTTTCTCCATGGCTTAGCGGAATAAACTGGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| 3UTR TCA 90 bp | GATCCAATGATGTGGAATGAGTCCAGTGGTGAAAGGCTTTGCAGCTaGCCCTGGTGGCACATGCTTGTAATCCTAGTTATTATTAGTTGG | + |
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Preference number: 1 (lower is better) Translates to: DPMMWNESSGERLCS*PWWHMLVILVIISW Trigger: CCAACTAATAATAACTAGGATTACAAGCATGTGCCACCAGGGTCAGCTGCAAAGCCTTTCACCACTGGACTCATTCCACATCATTGGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052438.8 |
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| 3UTR TCA 90 bp | GTGGCAATAGTGGTCCCTGTATCGTCTGGTTTGAATGATGGGATTTaGAGCACAGCTTCTGGGAAATGGGAAATGAAGAAACTTAACCAT | + |
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Preference number: 1 (lower is better) Translates to: VAIVVPVSSGLNDGI*STASGKWEMKKLNH Trigger: ATGGTTAAGTTTCTTCATTTCCCATTTCCCAGAAGCTGTGCTTCAAATCCCATCATTCAAACCAGACGATACAGGGACCACTATTGCCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052438.8 |
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| 3UTR GCA 90 bp | ATTAGGAAGATTATAAGGAATGGAGTTGGGGTGAGCTTTAACCCCTaGAGTAGCAGAGCACCAGTATGTTATTCTTACTTTGACCTGCAG | + |
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Preference number: 1 (lower is better) Translates to: IRKIIRNGVGVSFNP*SSRAPVCYSYFDLQ Trigger: CTGCAGGTCAAAGTAAGAATAACATACTGGTGCTCTGCTACTGCAGGGGTTAAAGCTCACCCCAACTCCATTCCTTATAATCTTCCTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052438.8 |
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| 3UTR-3UTR TCA 90 bp | GCACACACACACACACACACACGCACATTGAGTAGCAAATCCTGCAGCAAGTGCGGAATGGAGTTGGGGTaGGCTTTAACCCCTGCAGTA | + |
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Preference number: 2 (lower is better) Translates to: AHTHTHTRTLSSKSCSKCGMELG*ALTPAV Trigger: TACTGCAGGGGTTAAAGCTCACCCCAACTCCATTCC...GCACTTGCTGCAGGATTTGCTACTCAATGTGCGTGTGTGTGTGTGTGTGTGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052438.8 |
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| 3UTR CAA 90 bp | CAAGTTGCCAGTCACCACTATCCTTGGTCTTCCGTGCAGATGTCATaGGCACCTCCTCTAGCTAGGAAAGCCAAAAGCATCTCCAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: QVASHHYPWSSVQMS*APPLARKAKSISRL Trigger: AAGCCTGGAGATGCTTTTGGCTTTCCTAGCTAGAGGAGGTGCCAATGACATCTGCACGGAAGACCAAGGATAGTGGTGACTGGCAACTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052438.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGTTTATTCCGCTAAGCCATGGAGAAAGTCATGGAGAAAGTGGCTTCCTTCCCATCATGCCCAAGGGTaGGTGGAGAGACACCTTGCA | + |
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Preference number: 2 (lower is better) Translates to: PVYSAKPWRKSWRKWLPSHHAQG*VERHLA Trigger: TGCAAGGTGTCTCTCCACGCACCCTTGGGCATGATG...GGAAGGAAGCCACTTTCTCCATGACTTTCTCCATGGCTTAGCGGAATAAACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCCGCAGAACCTCTGGCCCATTAGGAAGATTATAAGGAATGGAGTTGGGGTGTCAGAAAGGGATTCCTaGAGCCCACCTACTGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: APQNLWPIRKIIRNGVGVSERDS*SPPTVD Trigger: ATCCACAGTAGGTGGGCTCCAGGAATCCCTTTCTGA...CACCCCAACTCCATTCCTTATAATCTTCCTAATGGGCCAGAGGTTCTGCGGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052438.8 |
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| 3UTR-3UTR TCA 90 bp | AGGGTTGTGGGGTTCACAGATGACTTGAGCTACAGAGTGAGTTCAAGGCTAAGCCACACACACGCACATTaGGTAGCAAATCCTGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: RVVGFTDDLSYRVSSRLSHTHAH*VANPAA Trigger: TGCTGCAGGATTTGCTACTCAATGTGCGTGTGTGTG...GCTTAGCCTTGAACTCACTCTGTAGCTCAAGTCATCTGTGAACCCCACAACCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052438.8 |
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| 3UTR-3UTR GCA 90 bp | TGGCTTCCTTCCCAGCCTCCAAACCTGGAAGCTCAAAAATCACTTTTGTCTTCACATCATGCCCAAGGGTaGGTGGAGAGACACCTTGCA | + |
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Preference number: 2 (lower is better) Translates to: WLPSQPPNLEAQKSLLSSHHAQG*VERHLA Trigger: TGCAAGGTGTCTCTCCACGCACCCTTGGGCATGATG...TGAAGACAAAAGTGATTTTTGAGCTTCCAGGTTTGGAGGCTGGGAAGGAAGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| 3UTR-3UTR GCA 90 bp | TTTATTCCGCTAAGCCATGGAGAAAGTCATGGAGAAAGTGGCTTCCTTCCCAGCACCAAAAGAACATCATaGCCAAGGGTGCGTGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: FIPLSHGESHGESGFLPSTKRTS*PRVRGE Trigger: CTCTCCACGCACCCTTGGGCATGATGTTCTTTTGGT...GCTGGGAAGGAAGCCACTTTCTCCATGACTTTCTCCATGGCTTAGCGGAATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCCGCAGAACCTCTGGCCCATTAGGAAGATTATAAGGAATGGAGTTGGGGTGCTATATTGCCGGTTCTaGTCACACCCCTACTCTTTT | + |
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Preference number: 2 (lower is better) Translates to: APQNLWPIRKIIRNGVGVLYCRF*SHPYSF Trigger: AAAAGAGTAGGGGTGTGACCAGAACCGGCAATATAG...CACCCCAACTCCATTCCTTATAATCTTCCTAATGGGCCAGAGGTTCTGCGGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052438.8 |
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| 3UTR-3UTR TCA 90 bp | GTTGTGGGGTTCACAGATGACTTGAGCTACAGAGTGAGTTCAAGGCTAAGCGGGCTGTATCGTCTGGTTTaGATGATGGGATTTGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: VVGFTDDLSYRVSSRLSGLYRLV*MMGFEA Trigger: TGCTTCAAATCCCATCATTCAAACCAGACGATACAG...CCCGCTTAGCCTTGAACTCACTCTGTAGCTCAAGTCATCTGTGAACCCCACAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052438.8 |
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| 3UTR CAA 90 bp | TGGCTTCCTTCCCAGCCTCCAAACCTGGAAGCTCAAAAATCACTTTaGTCTTCAGCCTGTGAAGACTTCTTAGGCCCACAACCAAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: WLPSQPPNLEAQKSL*SSACEDFLGPQPKE Trigger: TTCTTTTGGTTGTGGGCCTAAGAAGTCTTCACAGGCTGAAGACAAAAGTGATTTTTGAGCTTCCAGGTTTGGAGGCTGGGAAGGAAGCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGCTAGGAAAGCCAAAAGCATCTCCAGGCTTTGTCCAGTGACGAGTGAAATCCCCAGCCTCCAAACCTaGAAGCTCAAAAATCACTTT | + |
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Preference number: 2 (lower is better) Translates to: LARKAKSISRLCPVTSEIPSLQT*KLKNHF Trigger: AAAGTGATTTTTGAGCTTCCAGGTTTGGAGGCTGGG...GATTTCACTCGTCACTGGACAAAGCCTGGAGATGCTTTTGGCTTTCCTAGCTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052438.8 |
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| 3UTR-3UTR GCA 90 bp | ATCCTAGTTATTATTAGTTGGAAAGCTGAGATAGAAGGGTTGTGGGGTTCACAGACCAAAAGAACATCATaGCCAAGGGTGCGTGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: ILVIISWKAEIEGLWGSQTKRTS*PRVRGE Trigger: CTCTCCACGCACCCTTGGGCATGATGTTCTTTTGGT...CTGTGAACCCCACAACCCTTCTATCTCAGCTTTCCAACTAATAATAACTAGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052438.8 |
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| 3UTR-3UTR TCA 90 bp | ATCCTAGTTATTATTAGTTGGAAAGCTGAGATAGAAGGGTTGTGGGGTTCACAGATGTTATTCTTACTTTaGCCTGCAGGTGGCAATAGT | + |
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Preference number: 2 (lower is better) Translates to: ILVIISWKAEIEGLWGSQMLFLL*PAGGNS Trigger: ACTATTGCCACCTGCAGGTCAAAGTAAGAATAACAT...CTGTGAACCCCACAACCCTTCTATCTCAGCTTTCCAACTAATAATAACTAGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052438.8 |
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| 3UTR CAA 90 bp | CCTTTATTCTTTCTTTTGGTTCCAAATCCACTTTGCCCTTCAGCATaGTATGCCTCTGAGATGTTCACAGTTCACTTTAAGGTTATATGC | + |
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Preference number: 2 (lower is better) Translates to: PLFFLLVPNPLCPSA*YASEMFTVHFKVIC Trigger: GCATATAACCTTAAAGTGAACTGTGAACATCTCAGAGGCATACAATGCTGAAGGGCAAAGTGGATTTGGAACCAAAAGAAAGAATAAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052438.8 |
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| 3UTR TCA 72 bp | GTGAATGAACGTGGGAGTGTCCCTCCCTGGCCTGTTTaGGACGGAGTTTGGTCCCCTGTGGGTGAGATTCAA | + |
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Preference number: 3 (lower is better) Translates to: VNERGSVPPWPV*DGVWSPVGEIQ Trigger: TTGAATCTCACCCACAGGGGACCAAACTCCGTCTCAAACAGGCCAGGGAGGGACACTCCCACGTTCATTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052438.8 |
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| 3UTR-3UTR CAA 90 bp | GTTGTGGGGTTCACAGATGACTTGAGCTACAGAGTGAGTTCAAGGCTAAGCGGGGACCACACAAGGCCTTaGCCCTCTTGTGAGTTTGTC | + |
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Preference number: 3 (lower is better) Translates to: VVGFTDDLSYRVSSRLSGDHTRP*PSCEFV Trigger: GACAAACTCACAAGAGGGCAAAGGCCTTGTGTGGTC...CCCGCTTAGCCTTGAACTCACTCTGTAGCTCAAGTCATCTGTGAACCCCACAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052438.8 |
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| 3UTR TCA 72 bp | GCCCAAGGGTGCGTGGAGAGACACCTTGCAAATACCTaGCTTGAACAGGGTGAAGCCAAACTCACTCTAAAG | + |
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Preference number: 3 (lower is better) Translates to: AQGCVERHLANT*LEQGEAKLTLK Trigger: CTTTAGAGTGAGTTTGGCTTCACCCTGTTCAAGTCAGGTATTTGCAAGGTGTCTCTCCACGCACCCTTGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| 3UTR TCA 72 bp | TCCCGTATGCACACACACACACACACACACGCACATTaGGTAGCAAATCCTGCAGCAAGTGCTAACACTGCA | + |
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Preference number: 3 (lower is better) Translates to: SRMHTHTHTHAH*VANPAASANTA Trigger: TGCAGTGTTAGCACTTGCTGCAGGATTTGCTACTCAATGTGCGTGTGTGTGTGTGTGTGTGTGCATACGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052438.8 |
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| 3UTR CCA 72 bp | GAGGAGGTCATTATGAAAGAATACACTGAGTACAATTaGGTGAATGAACGTGGGAGTGTCCCTCCCTGGCCT | + |
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Preference number: 3 (lower is better) Translates to: EEVIMKEYTEYN*VNERGSVPPWP Trigger: AGGCCAGGGAGGGACACTCCCACGTTCATTCACCCAATTGTACTCAGTGTATTCTTTCATAATGACCTCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052438.8 |
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| 3UTR GCA 72 bp | ATAAATATCCCCAATGTTGCCATCTGCTGTACAAAATaGAGGGAGTCAGAAAGGGATTCCTGGAGCCCACCT | + |
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Preference number: 3 (lower is better) Translates to: INIPNVAICCTK*RESERDSWSPP Trigger: AGGTGGGCTCCAGGAATCCCTTTCTGACTCCCTGCATTTTGTACAGCAGATGGCAACATTGGGGATATTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052438.8 |
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| 3UTR CCA 72 bp | TGGTGGCACATGCTTGTAATCCTAGTTATTATTAGTTaGAAAGCTGAGATAGAAGGGTTGTGGGGTTCACAG | + |
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Preference number: 3 (lower is better) Translates to: WWHMLVILVIIS*KAEIEGLWGSQ Trigger: CTGTGAACCCCACAACCCTTCTATCTCAGCTTTCCAACTAATAATAACTAGGATTACAAGCATGTGCCACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052438.8 |
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| 3UTR-3UTR CAA 90 bp | AAATGCAAAGCAGTCCAGTTTATTCCGCTAAGCCATGGAGAAAGTCATGGAGAAGCTCAAAAATCACTTTaGTCTTCAGCCTGTGAAGAC | + |
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Preference number: 3 (lower is better) Translates to: KCKAVQFIPLSHGESHGEAQKSL*SSACED Trigger: GTCTTCACAGGCTGAAGACAAAAGTGATTTTTGAGC...TTCTCCATGACTTTCTCCATGGCTTAGCGGAATAAACTGGACTGCTTTGCATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| 3UTR TCA 72 bp | GACTGCCCAGTGTATTTTCTACATATCCACACATTGTaGGCTAAATGCAAAGCAGTCCAGTTTATTCCGCTA | + |
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Preference number: 3 (lower is better) Translates to: DCPVYFLHIHTL*AKCKAVQFIPL Trigger: TAGCGGAATAAACTGGACTGCTTTGCATTTAGCTCACAATGTGTGGATATGTAGAAAATACACTGGGCAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052438.8 |
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| 3UTR GCA 72 bp | ATTATAAGGAATGGAGTTGGGGTGAGCTTTAACCCCTaGAGTAGCAGAGCACCAGTATGTTATTCTTACTTT | + |
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Preference number: 3 (lower is better) Translates to: IIRNGVGVSFNP*SSRAPVCYSYF Trigger: AAAGTAAGAATAACATACTGGTGCTCTGCTACTGCAGGGGTTAAAGCTCACCCCAACTCCATTCCTTATAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052438.8 |
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| 3UTR GCA 72 bp | CAAATCCTGCAGCAAGTGCTAACACTGCAGCTACTTTaGCAGTTCTTCCGAAAGGACATAAAATTAAACAGA | + |
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Preference number: 3 (lower is better) Translates to: QILQQVLTLQLL*QFFRKDIKLNR Trigger: TCTGTTTAATTTTATGTCCTTTCGGAAGAACTGGCAAAGTAGCTGCAGTGTTAGCACTTGCTGCAGGATTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052438.8 |
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| 3UTR CCA 72 bp | AAACTTAACCATGCCAACTTTGACACAGTGCCAAGGTaGAGGATACTAAAATATAAATATCCCCAATGTTGC | + |
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Preference number: 3 (lower is better) Translates to: KLNHANFDTVPR*RILKYKYPQCC Trigger: GCAACATTGGGGATATTTATATTTTAGTATCCTCCACCTTGGCACTGTGTCAAAGTTGGCATGGTTAAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052438.8 |
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| CDS-3UTR TCA 90 bp | GCCTGTGAAGACTTCTTAGGCCCACAACCAAAAGAACATCATGCCCAAGGGTGCTGCTCCAGGCTGGGGTaGGCTGCCGCCTGGATCAGA | + |
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Preference number: 4 (lower is better) Translates to: ACEDFLGPQPKEHHAQGCCSRLG*AAAWIR Trigger: TCTGATCCAGGCGGCAGCTCACCCCAGCCTGGAGCA...GCACCCTTGGGCATGATGTTCTTTTGGTTGTGGGCCTAAGAAGTCTTCACAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| CDS-3UTR TCA 90 bp | CAACCAAAAGAACATCATGCCCAAGGGTGCGTGGAGAGACACCTTGCAAATACCGGCCACACACCAGGATaGGCGTGTCCTCCCCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: QPKEHHAQGCVERHLANTGHTPG*ACPPQE Trigger: CTCCTGGGGAGGACACGCTCATCCTGGTGTGTGGCC...GGTATTTGCAAGGTGTCTCTCCACGCACCCTTGGGCATGATGTTCTTTTGGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| CDS-3UTR TCA 90 bp | GCACACACACACACACACACACGCACATTGAGTAGCAAATCCTGCAGCAAGTGCCAGGACATGGTCTGGTaGGGGCAGCCCAAAGCGGAA | + |
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Preference number: 4 (lower is better) Translates to: AHTHTHTRTLSSKSCSKCQDMVW*GQPKAE Trigger: TTCCGCTTTGGGCTGCCCTCACCAGACCATGTCCTG...GCACTTGCTGCAGGATTTGCTACTCAATGTGCGTGTGTGTGTGTGTGTGTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052438.8 |
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| CDS-3UTR TCA 90 bp | TGGAGAGACACCTTGCAAATACCTGACTTGAACAGGGTGAAGCCAAACTCACTCGGCCACACACCAGGATaGGCGTGTCCTCCCCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: WRDTLQIPDLNRVKPNSLGHTPG*ACPPQE Trigger: CTCCTGGGGAGGACACGCTCATCCTGGTGTGTGGCC...GAGTGAGTTTGGCTTCACCCTGTTCAAGTCAGGTATTTGCAAGGTGTCTCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| CDS-3UTR TCA 90 bp | TTTATTCCGCTAAGCCATGGAGAAAGTCATGGAGAAAGTGGCTTCCTTCCCAGCTGCTCCAGGCTGGGGTaGGCTGCCGCCTGGATCAGA | + |
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Preference number: 4 (lower is better) Translates to: FIPLSHGESHGESGFLPSCSRLG*AAAWIR Trigger: TCTGATCCAGGCGGCAGCTCACCCCAGCCTGGAGCA...GCTGGGAAGGAAGCCACTTTCTCCATGACTTTCTCCATGGCTTAGCGGAATAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| CDS-3UTR GCA 90 bp | CCCAAGGGTGCGTGGAGAGACACCTTGCAAATACCTGACTTGAACAGGGTGAAGCCAGGAGGAGGGAGGTaGTCCTTGATCATGTCAGCG | + |
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Preference number: 4 (lower is better) Translates to: PKGAWRDTLQIPDLNRVKPGGGR*SLIMSA Trigger: CGCTGACATGATCAAGGAGCACCTCCCTCCTCCTGG...CTTCACCCTGTTCAAGTCAGGTATTTGCAAGGTGTCTCTCCACGCACCCTTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| CDS-3UTR TCA 90 bp | ATCATGCCCAAGGGTGCGTGGAGAGACACCTTGCAAATACCTGACTTGAACAGGTGTCCTTGGTATAGCTaGGCTGCTCCAGGCTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: IMPKGAWRDTLQIPDLNRCPWYS*AAPGWG Trigger: ACCCCAGCCTGGAGCAGCTCAGCTATACCAAGGACA...CCTGTTCAAGTCAGGTATTTGCAAGGTGTCTCTCCACGCACCCTTGGGCATGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| CDS-3UTR CCA 90 bp | ATCATGCCCAAGGGTGCGTGGAGAGACACCTTGCAAATACCTGACTTGAACAGGAGGGCAGCGGGTACTTaGCTTCAGGGTCCTGTAAGG | + |
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Preference number: 4 (lower is better) Translates to: IMPKGAWRDTLQIPDLNRRAAGT*LQGPVR Trigger: CCTTACAGGACCCTGAAGCCAAGTACCCGCTGCCCT...CCTGTTCAAGTCAGGTATTTGCAAGGTGTCTCTCCACGCACCCTTGGGCATGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| CDS-3UTR TCA 90 bp | GTTTATTCCGCTAAGCCATGGAGAAAGTCATGGAGAAAGTGGCTTCCTTCCCAGCAGGACATGGTCTGGTaGGGGCAGCCCAAAGCGGAA | + |
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Preference number: 4 (lower is better) Translates to: VYSAKPWRKSWRKWLPSQQDMVW*GQPKAE Trigger: TTCCGCTTTGGGCTGCCCTCACCAGACCATGTCCTG...CTGGGAAGGAAGCCACTTTCTCCATGACTTTCTCCATGGCTTAGCGGAATAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| CDS-3UTR CCA 90 bp | AACATCATGCCCAAGGGTGCGTGGAGAGACACCTTGCAAATACCTGACTTGAACAGGGCAGCGGGTACTTaGCTTCAGGGTCCTGTAAGG | + |
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Preference number: 4 (lower is better) Translates to: NIMPKGAWRDTLQIPDLNRAAGT*LQGPVR Trigger: CCTTACAGGACCCTGAAGCCAAGTACCCGCTGCCCT...GTTCAAGTCAGGTATTTGCAAGGTGTCTCTCCACGCACCCTTGGGCATGATGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| CDS-3UTR CCA 90 bp | AATGGAGTTGGGGTGAGCTTTAACCCCTGCAGTAGCAGAGCACCAGTATGTTATCGCCTGGATCAGAGGTaGTGGGCCACACACCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: NGVGVSFNPCSSRAPVCYRLDQR*WATHQD Trigger: ATCCTGGTGTGTGGCCCACCACCTCTGATCCAGGCG...ATAACATACTGGTGCTCTGCTACTGCAGGGGTTAAAGCTCACCCCAACTCCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052438.8 |
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| CDS-3UTR CCA 90 bp | TGGAGAGACACCTTGCAAATACCTGACTTGAACAGGGTGAAGCCAAACTCACTCCGCCTGGATCAGAGGTaGTGGGCCACACACCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: WRDTLQIPDLNRVKPNSLRLDQR*WATHQD Trigger: ATCCTGGTGTGTGGCCCACCACCTCTGATCCAGGCG...GAGTGAGTTTGGCTTCACCCTGTTCAAGTCAGGTATTTGCAAGGTGTCTCTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| CDS-3UTR GCA 90 bp | TGGAGAGACACCTTGCAAATACCTGACTTGAACAGGGTGAAGCCAAACTCACTCCCAGGAGGAGGGAGGTaGTCCTTGATCATGTCAGCG | + |
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Preference number: 4 (lower is better) Translates to: WRDTLQIPDLNRVKPNSLPGGGR*SLIMSA Trigger: CGCTGACATGATCAAGGAGCACCTCCCTCCTCCTGG...GAGTGAGTTTGGCTTCACCCTGTTCAAGTCAGGTATTTGCAAGGTGTCTCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| CDS-3UTR CCA 90 bp | CTTGAACAGGGTGAAGCCAAACTCACTCTAAAGCAGAGAGAGGGACCCGCTAAGTGTACTTCCAGTCACTaGGAGGCCTGTCCAGGGTAT | + |
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Preference number: 4 (lower is better) Translates to: LEQGEAKLTLKQREGPAKCTSSH*EACPGY Trigger: ATACCCTGGACAGGCCTCCCAGTGACTGGAAGTACA...CTTAGCGGGTCCCTCTCTCTGCTTTAGAGTGAGTTTGGCTTCACCCTGTTCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| CDS-3UTR CCA 90 bp | AATGGAGTTGGGGTGAGCTTTAACCCCTGCAGTAGCAGAGCACCAGTATGTTATCTGGATCAGAGGTGGTaGGCCACACACCAGGATGAG | + |
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Preference number: 4 (lower is better) Translates to: NGVGVSFNPCSSRAPVCYLDQRW*ATHQDE Trigger: CTCATCCTGGTGTGTGGCCCACCACCTCTGATCCAG...ATAACATACTGGTGCTCTGCTACTGCAGGGGTTAAAGCTCACCCCAACTCCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052438.8 |
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| CDS-3UTR CCA 90 bp | TTTATTCCGCTAAGCCATGGAGAAAGTCATGGAGAAAGTGGCTTCCTTCCCAGCCTGGATCAGAGGTGGTaGGCCACACACCAGGATGAG | + |
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Preference number: 4 (lower is better) Translates to: FIPLSHGESHGESGFLPSLDQRW*ATHQDE Trigger: CTCATCCTGGTGTGTGGCCCACCACCTCTGATCCAG...GCTGGGAAGGAAGCCACTTTCTCCATGACTTTCTCCATGGCTTAGCGGAATAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| CDS-3UTR TCA 90 bp | AGTGGCTTCCTTCCCAGCCTCCAAACCTGGAAGCTCAAAAATCACTTTTGTCTTTGTCCTTGGTATAGCTaGGCTGCTCCAGGCTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: SGFLPSLQTWKLKNHFCLCPWYS*AAPGWG Trigger: ACCCCAGCCTGGAGCAGCTCAGCTATACCAAGGACA...AAGACAAAAGTGATTTTTGAGCTTCCAGGTTTGGAGGCTGGGAAGGAAGCCACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| CDS-3UTR CCA 90 bp | CTTGAACAGGGTGAAGCCAAACTCACTCTAAAGCAGAGAGAGGGACCCGCTAAGGTGTCCTTGGTGATGTaGCGAATCAGCTGTAGCATG | + |
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Preference number: 4 (lower is better) Translates to: LEQGEAKLTLKQREGPAKVSLVM*RISCSM Trigger: CATGCTACAGCTGATTCGCCACATCACCAAGGACAC...CTTAGCGGGTCCCTCTCTCTGCTTTAGAGTGAGTTTGGCTTCACCCTGTTCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| CDS-3UTR CCA 90 bp | ATCATGCCCAAGGGTGCGTGGAGAGACACCTTGCAAATACCTGACTTGAACAGGGTGTCCTTGGTGATGTaGCGAATCAGCTGTAGCATG | + |
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Preference number: 4 (lower is better) Translates to: IMPKGAWRDTLQIPDLNRVSLVM*RISCSM Trigger: CATGCTACAGCTGATTCGCCACATCACCAAGGACAC...CCTGTTCAAGTCAGGTATTTGCAAGGTGTCTCTCCACGCACCCTTGGGCATGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| 3UTR CAA 72 bp | AAGAACATCATGCCCAAGGGTGCGTGGAGAGACACCTaGCAAATACCTGACTTGAACAGGGTGAAGCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: KNIMPKGAWRDT*QIPDLNRVKPN Trigger: GTTTGGCTTCACCCTGTTCAAGTCAGGTATTTGCAAGGTGTCTCTCCACGCACCCTTGGGCATGATGTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| CDS-3UTR CCA 90 bp | CAAAGCAGTCCAGTTTATTCCGCTAAGCCATGGAGAAAGTCATGGAGAAAGTGGTGTACTTCCAGTCACTaGGAGGCCTGTCCAGGGTAT | + |
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Preference number: 4 (lower is better) Translates to: QSSPVYSAKPWRKSWRKWCTSSH*EACPGY Trigger: ATACCCTGGACAGGCCTCCCAGTGACTGGAAGTACA...CCACTTTCTCCATGACTTTCTCCATGGCTTAGCGGAATAAACTGGACTGCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| CDS-3UTR TCA 90 bp | CTTGAACAGGGTGAAGCCAAACTCACTCTAAAGCAGAGAGAGGGACCCGCTAAGTTCTGGTGTTGTGACTaGTTTGCTCCTTCTCAATCA | + |
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Preference number: 4 (lower is better) Translates to: LEQGEAKLTLKQREGPAKFWCCD*FAPSQS Trigger: TGATTGAGAAGGAGCAAATCAGTCACAACACCAGAA...CTTAGCGGGTCCCTCTCTCTGCTTTAGAGTGAGTTTGGCTTCACCCTGTTCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| CDS-3UTR GCA 90 bp | CAAAGCAGTCCAGTTTATTCCGCTAAGCCATGGAGAAAGTCATGGAGAAAGTGGGATGTTTTTGACTTCTaGAGCCCTTGTCTGGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: QSSPVYSAKPWRKSWRKWDVFDF*SPCLAA Trigger: GGCTGCCAGACAAGGGCTGCAGAAGTCAAAAACATC...CCACTTTCTCCATGACTTTCTCCATGGCTTAGCGGAATAAACTGGACTGCTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052438.8 |
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| CDS-3UTR CCA 90 bp | AGGGTTGTGGGGTTCACAGATGACTTGAGCTACAGAGTGAGTTCAAGGCTAAGCATATCCTCTTCTGTCTaGTTAGCAAAGAGGAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: RVVGFTDDLSYRVSSRLSISSSV*LAKRRD Trigger: GTCCCTCCTCTTTGCTAACCAGACAGAAGAGGATAT...GCTTAGCCTTGAACTCACTCTGTAGCTCAAGTCATCTGTGAACCCCACAACCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052438.8 |
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| CDS-3UTR TCA 90 bp | CCAGTTTATTCCGCTAAGCCATGGAGAAAGTCATGGAGAAAGTGGCTTCCTTCCTTCTGGTGTTGTGACTaGTTTGCTCCTTCTCAATCA | + |
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Preference number: 4 (lower is better) Translates to: PVYSAKPWRKSWRKWLPSFWCCD*FAPSQS Trigger: TGATTGAGAAGGAGCAAATCAGTCACAACACCAGAA...GGAAGGAAGCCACTTTCTCCATGACTTTCTCCATGGCTTAGCGGAATAAACTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| CDS-3UTR TCA 90 bp | TTCCAAATCCACTTTGCCCTTCAGCATTGTATGCCTCTGAGATGTTCACAGTTCAAGTCCACAAAGCCTTaGTCATCGTCACTGGAGACA | + |
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Preference number: 4 (lower is better) Translates to: FQIHFALQHCMPLRCSQFKSTKP*SSSLET Trigger: TGTCTCCAGTGACGATGATCAAGGCTTTGTGGACTT...GAACTGTGAACATCTCAGAGGCATACAATGCTGAAGGGCAAAGTGGATTTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052438.8 |
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| CDS-3UTR TCA 90 bp | ATCATGCCCAAGGGTGCGTGGAGAGACACCTTGCAAATACCTGACTTGAACAGGTTGTTTTGTTTGCTTTaGTTAAAAGGGTTCCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: IMPKGAWRDTLQIPDLNRLFCLL*LKGFLA Trigger: AGCCAGGAACCCTTTTAATCAAAGCAAACAAAACAA...CCTGTTCAAGTCAGGTATTTGCAAGGTGTCTCTCCACGCACCCTTGGGCATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208217.2 |
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| 3UTR CAA 72 bp | AGGAAGACCACACAAGGCCTTTGCCCTCTTGTGAGTTaGTCCTTCAAAGCAGAGAAATGTAAAGAAGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: RKTTQGLCPLVS*SFKAEKCKEGS Trigger: TGAACCTTCTTTACATTTCTCTGCTTTGAAGGACAAACTCACAAGAGGGCAAAGGCCTTGTGTGGTCTTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052438.8 |
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| 3UTR CAA 72 bp | GCAAATCCTGCAGCAAGTGCTAACACTGCAGCTACTTaGCCAGTTCTTCCGAAAGGACATAAAATTAAACAG | + |
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Preference number: 4 (lower is better) Translates to: ANPAASANTAAT*PVLPKGHKIKQ Trigger: CTGTTTAATTTTATGTCCTTTCGGAAGAACTGGCAAAGTAGCTGCAGTGTTAGCACTTGCTGCAGGATTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052438.8 |
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| CDS-3UTR TCA 90 bp | AAATGCAAAGCAGTCCAGTTTATTCCGCTAAGCCATGGAGAAAGTCATGGAGAAATGTTCTCCAAGTACTaGGTCATCTTTCCTCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: KCKAVQFIPLSHGESHGEMFSKY*VIFPPS Trigger: TGAAGGAGGAAAGATGACTCAGTACTTGGAGAACAT...TTCTCCATGACTTTCTCCATGGCTTAGCGGAATAAACTGGACTGCTTTGCATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| 3UTR CAA 72 bp | TTTCTTTTGGTTCCAAATCCACTTTGCCCTTCAGCATaGTATGCCTCTGAGATGTTCACAGTTCACTTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: FLLVPNPLCPSA*YASEMFTVHFK Trigger: CTTAAAGTGAACTGTGAACATCTCAGAGGCATACAATGCTGAAGGGCAAAGTGGATTTGGAACCAAAAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052438.8 |
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| CDS GCA 90 bp | AATCATGTCCTTGGTATAGCTGAGCTGCTCCAGGCTGGGGTGAGCTaGCGCCTGGATCAGAGGTGGTGGGCCACACACCAGGATGAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: NHVLGIAELLQAGVS*RLDQRWWATHQDER Trigger: ACGCTCATCCTGGTGTGTGGCCCACCACCTCTGATCCAGGCGGCAGCTCACCCCAGCCTGGAGCAGCTCAGCTATACCAAGGACATGATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| CDS GCA 90 bp | GGGCCACACACCAGGATGAGCGTGTCCTCCCCAGGAGGAGGGAGGTaGTCCTTGATCATGTCAGCGCTAACAAAGCCTGAGCTGTACTTC | + |
|
Preference number: 5 (lower is better) Translates to: GPHTRMSVSSPGGGR*SLIMSALTKPELYF Trigger: GAAGTACAGCTCAGGCTTTGTTAGCGCTGACATGATCAAGGAGCACCTCCCTCCTCCTGGGGAGGACACGCTCATCCTGGTGTGTGGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| CDS CCA 90 bp | AAGAGGAGGGACATCCTGGTCTCATCGCTGGTGTCCTTGGTGATGTaGCGAATCAGCTGTAGCATGGGCGTAATGCCTGTGCCTCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: KRRDILVSSLVSLVM*RISCSMGVMPVPPA Trigger: TGCTGGAGGCACAGGCATTACGCCCATGCTACAGCTGATTCGCCACATCACCAAGGACACCAGCGATGAGACCAGGATGTCCCTCCTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| CDS-3UTR CAA 90 bp | GTCTTACAAGGCAAGGAAGACCACACAAGGCCTTTGCCCTCTTGTGAGTTTGTCTCATCGCTGGTGTCCTaGGTGATGTGGCGAATCAGC | + |
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Preference number: 5 (lower is better) Translates to: VLQGKEDHTRPLPSCEFVSSLVS*VMWRIS Trigger: GCTGATTCGCCACATCACCAAGGACACCAGCGATGA...GACAAACTCACAAGAGGGCAAAGGCCTTGTGTGGTCTTCCTTGCCTTGTAAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052438.8 |
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| CDS TCA 90 bp | TGTACTTCCAGTCACTGGGAGGCCTGTCCAGGGTATACCACAGGTTaGACTGTTTGTGATGAGTCGTGGCGACTTCTTCTAGCTCCTTTC | + |
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Preference number: 5 (lower is better) Translates to: CTSSHWEACPGYTTG*TVCDESWRLLLAPF Trigger: GAAAGGAGCTAGAAGAAGTCGCCACGACTCATCACAAACAGTTCAACCTGTGGTATACCCTGGACAGGCCTCCCAGTGACTGGAAGTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| CDS-3UTR CAA 90 bp | TTAGGCCCACAACCAAAAGAACATCATGCCCAAGGGTGCGTGGAGAGACACCTTGGTGTTGTGACTGATTaGCTCCTTCTCAATCAAGGG | + |
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Preference number: 5 (lower is better) Translates to: LGPQPKEHHAQGCVERHLGVVTD*LLLNQG Trigger: CCCTTGATTGAGAAGGAGCAAATCAGTCACAACACC...AAGGTGTCTCTCCACGCACCCTTGGGCATGATGTTCTTTTGGTTGTGGGCCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| CDS-3UTR CAA 90 bp | AAGGGTGCGTGGAGAGACACCTTGCAAATACCTGACTTGAACAGGGTGAAGCCACCTCCTTCAGGATACTaGGGGTGCACATTTTTGAAG | + |
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Preference number: 5 (lower is better) Translates to: KGAWRDTLQIPDLNRVKPPPSGY*GCTFLK Trigger: CTTCAAAAATGTGCACCCCAAGTATCCTGAAGGAGG...TGGCTTCACCCTGTTCAAGTCAGGTATTTGCAAGGTGTCTCTCCACGCACCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| CDS-3UTR CAA 90 bp | CAAAGCAGTCCAGTTTATTCCGCTAAGCCATGGAGAAAGTCATGGAGAAAGTGGTCATCGCTGGTGTCCTaGGTGATGTGGCGAATCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QSSPVYSAKPWRKSWRKWSSLVS*VMWRIS Trigger: GCTGATTCGCCACATCACCAAGGACACCAGCGATGA...CCACTTTCTCCATGACTTTCTCCATGGCTTAGCGGAATAAACTGGACTGCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| CDS-3UTR CAA 90 bp | AAATGCAAAGCAGTCCAGTTTATTCCGCTAAGCCATGGAGAAAGTCATGGAGAAAAGGGCAGCGGGTACTaGGCTTCAGGGTCCTGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: KCKAVQFIPLSHGESHGEKGSGY*ASGSCK Trigger: CTTACAGGACCCTGAAGCCAAGTACCCGCTGCCCTT...TTCTCCATGACTTTCTCCATGGCTTAGCGGAATAAACTGGACTGCTTTGCATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| CDS-3UTR CAA 90 bp | TCACCCTCACCTCACATCAGCAAGTCCTGGACTGCCCAGTGTATTTTCTACATAGGTGTTGTGACTGATTaGCTCCTTCTCAATCAAGGG | + |
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Preference number: 5 (lower is better) Translates to: SPSPHISKSWTAQCIFYIGVVTD*LLLNQG Trigger: CCCTTGATTGAGAAGGAGCAAATCAGTCACAACACC...TATGTAGAAAATACACTGGGCAGTCCAGGACTTGCTGATGTGAGGTGAGGGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052438.8 |
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| CDS-3UTR CAA 90 bp | CAGTTTATTCCGCTAAGCCATGGAGAAAGTCATGGAGAAAGTGGCTTCCTTCCCCCTCCTTCAGGATACTaGGGGTGCACATTTTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QFIPLSHGESHGESGFLPPPSGY*GCTFLK Trigger: CTTCAAAAATGTGCACCCCAAGTATCCTGAAGGAGG...GGGAAGGAAGCCACTTTCTCCATGACTTTCTCCATGGCTTAGCGGAATAAACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| CDS-3UTR CAA 90 bp | GCCTGTGAAGACTTCTTAGGCCCACAACCAAAAGAACATCATGCCCAAGGGTGCAATATAAAGATGTTTTaGACTTCTGCAGCCCTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: ACEDFLGPQPKEHHAQGCNIKMF*TSAALV Trigger: GACAAGGGCTGCAGAAGTCAAAAACATCTTTATATT...GCACCCTTGGGCATGATGTTCTTTTGGTTGTGGGCCTAAGAAGTCTTCACAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052438.8 |
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| CDS-3UTR CAA 90 bp | AACATCATGCCCAAGGGTGCGTGGAGAGACACCTTGCAAATACCTGACTTGAACCTGATCACCAATTCATaGTTAATTTGTGCCAAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: NIMPKGAWRDTLQIPDLNLITNS*LICAKR Trigger: TCTCTTGGCACAAATTAACAATGAATTGGTGATCAG...GTTCAAGTCAGGTATTTGCAAGGTGTCTCTCCACGCACCCTTGGGCATGATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| CDS-3UTR CAA 90 bp | AACATCATGCCCAAGGGTGCGTGGAGAGACACCTTGCAAATACCTGACTTGAACTCAGGCTCACTTGTTTaGTTTGCTTTGATTAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: NIMPKGAWRDTLQIPDLNSGSLV*FALIKR Trigger: CCTTTTAATCAAAGCAAACAAAACAAGTGAGCCTGA...GTTCAAGTCAGGTATTTGCAAGGTGTCTCTCCACGCACCCTTGGGCATGATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| CDS-3UTR CAA 90 bp | TGGCTTCCTTCCCAGCCTCCAAACCTGGAAGCTCAAAAATCACTTTTGTCTTCACTGATCACCAATTCATaGTTAATTTGTGCCAAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: WLPSQPPNLEAQKSLLSSLITNS*LICAKR Trigger: TCTCTTGGCACAAATTAACAATGAATTGGTGATCAG...TGAAGACAAAAGTGATTTTTGAGCTTCCAGGTTTGGAGGCTGGGAAGGAAGCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| CDS-3UTR CAA 90 bp | AGTGGCTTCCTTCCCAGCCTCCAAACCTGGAAGCTCAAAAATCACTTTTGTCTTTCAGGCTCACTTGTTTaGTTTGCTTTGATTAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SGFLPSLQTWKLKNHFCLSGSLV*FALIKR Trigger: CCTTTTAATCAAAGCAAACAAAACAAGTGAGCCTGA...AAGACAAAAGTGATTTTTGAGCTTCCAGGTTTGGAGGCTGGGAAGGAAGCCACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| CDS GCA 72 bp | ACCAGGATGAGCGTGTCCTCCCCAGGAGGAGGGAGGTaGTCCTTGATCATGTCAGCGCTAACAAAGCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: TRMSVSSPGGGR*SLIMSALTKPE Trigger: CTCAGGCTTTGTTAGCGCTGACATGATCAAGGAGCACCTCCCTCCTCCTGGGGAGGACACGCTCATCCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| CDS CCA 72 bp | GATGTTTTTGACTTCTGCAGCCCTTGTCTGGCAGCCTaGCTCATTGTAGAACAGGCGCCCTGTTGGCCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: DVFDFCSPCLAA*LIVEQAPCWPP Trigger: CGGGGGCCAACAGGGCGCCTGTTCTACAATGAGCCAGGCTGCCAGACAAGGGCTGCAGAAGTCAAAAACATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000052438.8 |
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| CDS CAA 90 bp | CACACCAGGATGAGCGTGTCCTCCCCAGGAGGAGGGAGGTGCTCCTaGATCATGTCAGCGCTAACAAAGCCTGAGCTGTACTTCCAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: HTRMSVSSPGGGRCS*IMSALTKPELYFQS Trigger: TGACTGGAAGTACAGCTCAGGCTTTGTTAGCGCTGACATGATCAAGGAGCACCTCCCTCCTCCTGGGGAGGACACGCTCATCCTGGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| CDS CAA 72 bp | ATGAGCGTGTCCTCCCCAGGAGGAGGGAGGTGCTCCTaGATCATGTCAGCGCTAACAAAGCCTGAGCTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: MSVSSPGGGRCS*IMSALTKPELY Trigger: GTACAGCTCAGGCTTTGTTAGCGCTGACATGATCAAGGAGCACCTCCCTCCTCCTGGGGAGGACACGCTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| CDS TCA 72 bp | GAGGTGCTCCTTGATCATGTCAGCGCTAACAAAGCCTaGGCTGTACTTCCAGTCACTGGGAGGCCTGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: EVLLDHVSANKA*AVLPVTGRPVQ Trigger: CTGGACAGGCCTCCCAGTGACTGGAAGTACAGCTCAGGCTTTGTTAGCGCTGACATGATCAAGGAGCACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| CDS CCA 72 bp | GACATCCTGGTCTCATCGCTGGTGTCCTTGGTGATGTaGCGAATCAGCTGTAGCATGGGCGTAATGCCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: DILVSSLVSLVM*RISCSMGVMPV Trigger: CACAGGCATTACGCCCATGCTACAGCTGATTCGCCACATCACCAAGGACACCAGCGATGAGACCAGGATGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| CDS CAA 72 bp | AAGAGGAGGGACATCCTGGTCTCATCGCTGGTGTCCTaGGTGATGTGGCGAATCAGCTGTAGCATGGGCGTA | + |
|
Preference number: 6 (lower is better) Translates to: KRRDILVSSLVS*VMWRISCSMGV Trigger: TACGCCCATGCTACAGCTGATTCGCCACATCACCAAGGACACCAGCGATGAGACCAGGATGTCCCTCCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| CDS CAA 90 bp | TGGTTAGCAAAGAGGAGGGACATCCTGGTCTCATCGCTGGTGTCCTaGGTGATGTGGCGAATCAGCTGTAGCATGGGCGTAATGCCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: WLAKRRDILVSSLVS*VMWRISCSMGVMPV Trigger: CACAGGCATTACGCCCATGCTACAGCTGATTCGCCACATCACCAAGGACACCAGCGATGAGACCAGGATGTCCCTCCTCTTTGCTAACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| CDS TCA 72 bp | AGTCACTGGGAGGCCTGTCCAGGGTATACCACAGGTTaGACTGTTTGTGATGAGTCGTGGCGACTTCTTCTA | + |
|
Preference number: 6 (lower is better) Translates to: SHWEACPGYTTG*TVCDESWRLLL Trigger: TAGAAGAAGTCGCCACGACTCATCACAAACAGTTCAACCTGTGGTATACCCTGGACAGGCCTCCCAGTGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| CDS CAA 72 bp | CTGATTTGCTCCTTCTCAATCAAGGGCAGCGGGTACTaGGCTTCAGGGTCCTGTAAGGTGATAAGATCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LICSFSIKGSGY*ASGSCKVIRSF Trigger: GAAAGATCTTATCACCTTACAGGACCCTGAAGCCAAGTACCCGCTGCCCTTGATTGAGAAGGAGCAAATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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| CDS CAA 90 bp | ACTGGAGACAGGTGTGTAAGCCCTGATCACCAATTCATTGTTAATTaGTGCCAAGAGATGGACATAGTTACCGACAGGAAGCCCCAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: TGDRCVSPDHQFIVN*CQEMDIVTDRKPQD Trigger: GTCCTGGGGCTTCCTGTCGGTAACTATGTCCATCTCTTGGCACAAATTAACAATGAATTGGTGATCAGGGCTTACACACCTGTCTCCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052438.8 ENSMUST00000208217.2 |
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