Pregenerated sensors for CYB5D2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057778Ensembl transcript IDs: ENSMUST00000079681.6, ENSMUST00000156294.8
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAAGAGATGAGAAGAGCTGCGGCTGTGCAGCAGAGAACGGAATTCTaGAGCGGGGGTGAGAAACCTGCAGCGAAGCCTCTTACAGCGTGT | + |
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Preference number: 1 (lower is better) Translates to: KEMRRAAAVQQRTEF*SGGEKPAAKPLTAC Trigger: ACACGCTGTAAGAGGCTTCGCTGCAGGTTTCTCACCCCCGCTGCAGAATTCCGTTCTCTGCTGCACAGCCGCAGCTCTTCTCATCTCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR CCA 90 bp | TCTTGCAGGACATCATGGTCAAAAAGTCAAGAGCGCTGGGCGTGGTaGCACACGCCTTTAATCCTAGCACTTGGGAGGCAGAGACAGGTG | + |
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Preference number: 1 (lower is better) Translates to: SCRTSWSKSQERWAW*HTPLILALGRQRQV Trigger: CACCTGTCTCTGCCTCCCAAGTGCTAGGATTAAAGGCGTGTGCCACCACGCCCAGCGCTCTTGACTTTTTGACCATGATGTCCTGCAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR GCA 90 bp | GGGGATTATGGTGTGCTCCATCTGTGTAAGTCAAGCCCCAGAATCTaGTACTCTAGTTTATTATCTCATCTCACTGGACCATCCCAGTTC | + |
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Preference number: 1 (lower is better) Translates to: GDYGVLHLCKSSPRI*YSSLLSHLTGPSQF Trigger: GAACTGGGATGGTCCAGTGAGATGAGATAATAAACTAGAGTAGCAGATTCTGGGGCTTGACTTACACAGATGGAGCACACCATAATCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR TCA 90 bp | TTTACTAAGGTGCAAAATCTTCTTGGGAAATGTCTGATTTTCCACTaGGAACCACAGTCCTGCTCCAAGTACCAGCAGGACTGGCATGAT | + |
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Preference number: 1 (lower is better) Translates to: FTKVQNLLGKCLIFH*EPQSCSKYQQDWHD Trigger: ATCATGCCAGTCCTGCTGGTACTTGGAGCAGGACTGTGGTTCTCAGTGGAAAATCAGACATTTCCCAAGAAGATTTTGCACCTTAGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR TCA 90 bp | CAATTCTATGTTGATTTCACTTTGTTCATTAATGTCTGCAGGCTCTaGAGGAAGATGAGAGAGGACAGAGGTTCCAAACACTGTCAGAAC | + |
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Preference number: 1 (lower is better) Translates to: QFYVDFTLFINVCRL*RKMREDRGSKHCQN Trigger: GTTCTGACAGTGTTTGGAACCTCTGTCCTCTCTCATCTTCCTTCAGAGCCTGCAGACATTAATGAACAAAGTGAAATCAACATAGAATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR-3UTR CCA 90 bp | TCAAGCTTTTTGATTGGAGATGCTACCTCAGAAGGAACCCCTAAGGGATGGGACAAAAGTCAAGAGCGCTaGGCGTGGTGGCACACGCCT | + |
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Preference number: 2 (lower is better) Translates to: SSFLIGDATSEGTPKGWDKSQER*AWWHTP Trigger: AGGCGTGTGCCACCACGCCCAGCGCTCTTGACTTTT...GTCCCATCCCTTAGGGGTTCCTTCTGAGGTAGCATCTCCAATCAAAAAGCTTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR-3UTR GCA 90 bp | TGGTGCATGTCTTTAATCCCAATACTCGGGAGGCAGAGGCAGGTGGATTTCTGTCAGAGAACGGAATTCTaGAGCGGGGGTGAGAAACCT | + |
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Preference number: 2 (lower is better) Translates to: WCMSLIPILGRQRQVDFCQRTEF*SGGEKP Trigger: AGGTTTCTCACCCCCGCTGCAGAATTCCGTTCTCTG...ACAGAAATCCACCTGCCTCTGCCTCCCGAGTATTGGGATTAAAGACATGCACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR-3UTR CCA 90 bp | TGGTGCATGTCTTTAATCCCAATACTCGGGAGGCAGAGGCAGGTGGATTTCTGTAAGTACCAGCAGGACTaGCATGATGGGCAGAGTGCA | + |
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Preference number: 2 (lower is better) Translates to: WCMSLIPILGRQRQVDFCKYQQD*HDGQSA Trigger: TGCACTCTGCCCATCATGCCAGTCCTGCTGGTACTT...ACAGAAATCCACCTGCCTCTGCCTCCCGAGTATTGGGATTAAAGACATGCACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR-3UTR CCA 90 bp | TCAAGCTTTTTGATTGGAGATGCTACCTCAGAAGGAACCCCTAAGGGATGGGACGGAGGCAGAGGCAGGTaGATTTCTGTGAGTTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: SSFLIGDATSEGTPKGWDGGRGR*ISVSSR Trigger: CCTGGAACTCACAGAAATCCACCTGCCTCTGCCTCC...GTCCCATCCCTTAGGGGTTCCTTCTGAGGTAGCATCTCCAATCAAAAAGCTTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR-3UTR TCA 90 bp | GAAGCTCAAGGACCTAGGGATATAGCTCAGTTGGTAAAGTGCTTGCCTAGCATGGTAAAGAAAGCTGTTTaGTGCACACCAGGGCAGGGG | + |
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Preference number: 2 (lower is better) Translates to: EAQGPRDIAQLVKCLPSMVKKAV*CTPGQG Trigger: CCCCTGCCCTGGTGTGCATCAAACAGCTTTCTTTAC...CATGCTAGGCAAGCACTTTACCAACTGAGCTATATCCCTAGGTCCTTGAGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR-3UTR TCA 90 bp | GAAGCTCAAGGACCTAGGGATATAGCTCAGTTGGTAAAGTGCTTGCCTAGCATGAGAACCAGAAAGAGATaGGAAGAGCTGCGGCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: EAQGPRDIAQLVKCLPSMRTRKR*EELRLC Trigger: GCACAGCCGCAGCTCTTCTCATCTCTTTCTGGTTCT...CATGCTAGGCAAGCACTTTACCAACTGAGCTATATCCCTAGGTCCTTGAGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR-3UTR TCA 90 bp | GAAGCTCAAGGACCTAGGGATATAGCTCAGTTGGTAAAGTGCTTGCCTAGCATGAATGTCTGCAGGCTCTaGAGGAAGATGAGAGAGGAC | + |
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Preference number: 2 (lower is better) Translates to: EAQGPRDIAQLVKCLPSMNVCRL*RKMRED Trigger: GTCCTCTCTCATCTTCCTTCAGAGCCTGCAGACATT...CATGCTAGGCAAGCACTTTACCAACTGAGCTATATCCCTAGGTCCTTGAGCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR-3UTR TCA 90 bp | AATGAAGCTCAAGGACCTAGGGATATAGCTCAGTTGGTAAAGTGCTTGCCTAGCGTAAAGAAAGCTGTTTaGTGCACACCAGGGCAGGGG | + |
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Preference number: 2 (lower is better) Translates to: NEAQGPRDIAQLVKCLPSVKKAV*CTPGQG Trigger: CCCCTGCCCTGGTGTGCATCAAACAGCTTTCTTTAC...GCTAGGCAAGCACTTTACCAACTGAGCTATATCCCTAGGTCCTTGAGCTTCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR-3UTR GCA 90 bp | AATGAAGCTCAAGGACCTAGGGATATAGCTCAGTTGGTAAAGTGCTTGCCTAGCAGAGATGAGAAGAGCTaGGGCTGTGCAGCAGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: NEAQGPRDIAQLVKCLPSRDEKS*GCAAEN Trigger: GTTCTCTGCTGCACAGCCGCAGCTCTTCTCATCTCT...GCTAGGCAAGCACTTTACCAACTGAGCTATATCCCTAGGTCCTTGAGCTTCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR CAA 90 bp | AATGAAGCTCAAGGACCTAGGGATATAGCTCAGTTGGTAAAGTGCTaGCCTAGCATGTATGTGGCTCCGGTTCATTCAACCCCTCCTACT | + |
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Preference number: 2 (lower is better) Translates to: NEAQGPRDIAQLVKC*PSMYVAPVHSTPPT Trigger: AGTAGGAGGGGTTGAATGAACCGGAGCCACATACATGCTAGGCAAGCACTTTACCAACTGAGCTATATCCCTAGGTCCTTGAGCTTCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR-3UTR TCA 90 bp | GAAGCTCAAGGACCTAGGGATATAGCTCAGTTGGTAAAGTGCTTGCCTAGCATGCAGCCAGTAGAATTGTaGCCCACATTTGCAGAGTGT | + |
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Preference number: 2 (lower is better) Translates to: EAQGPRDIAQLVKCLPSMQPVEL*PTFAEC Trigger: ACACTCTGCAAATGTGGGTCACAATTCTACTGGCTG...CATGCTAGGCAAGCACTTTACCAACTGAGCTATATCCCTAGGTCCTTGAGCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR-3UTR TCA 90 bp | CCCAGTTCTCATGGAGTCAGTTTGCCCTGGAGTAGAGGTTTTAGAAATGTCACACAGCCAGTAGAATTGTaGCCCACATTTGCAGAGTGT | + |
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Preference number: 2 (lower is better) Translates to: PSSHGVSLPWSRGFRNVTQPVEL*PTFAEC Trigger: ACACTCTGCAAATGTGGGTCACAATTCTACTGGCTG...TGTGACATTTCTAAAACCTCTACTCCAGGGCAAACTGACTCCATGAGAACTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR-3UTR TCA 90 bp | ATCCCAGTTCTCATGGAGTCAGTTTGCCCTGGAGTAGAGGTTTTAGAAATGTCAAATGTCTGCAGGCTCTaGAGGAAGATGAGAGAGGAC | + |
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Preference number: 2 (lower is better) Translates to: IPVLMESVCPGVEVLEMSNVCRL*RKMRED Trigger: GTCCTCTCTCATCTTCCTTCAGAGCCTGCAGACATT...TGACATTTCTAAAACCTCTACTCCAGGGCAAACTGACTCCATGAGAACTGGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR-3UTR TCA 90 bp | TGGTGCATGTCTTTAATCCCAATACTCGGGAGGCAGAGGCAGGTGGATTTCTGTTTCTTGGGAAATGTCTaGTTTTCCACTGAGAACCAC | + |
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Preference number: 2 (lower is better) Translates to: WCMSLIPILGRQRQVDFCFLGNV*FSTENH Trigger: GTGGTTCTCAGTGGAAAATCAGACATTTCCCAAGAA...ACAGAAATCCACCTGCCTCTGCCTCCCGAGTATTGGGATTAAAGACATGCACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR-3UTR GCA 90 bp | GAAGCTCAAGGACCTAGGGATATAGCTCAGTTGGTAAAGTGCTTGCCTAGCATGCTCATGGAGTCAGTTTaGCCTGGAGTAGAGGTTTTA | + |
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Preference number: 2 (lower is better) Translates to: EAQGPRDIAQLVKCLPSMLMESV*PGVEVL Trigger: TAAAACCTCTACTCCAGGGCAAACTGACTCCATGAG...CATGCTAGGCAAGCACTTTACCAACTGAGCTATATCCCTAGGTCCTTGAGCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR-3UTR CCA 90 bp | TGGTGCATGTCTTTAATCCCAATACTCGGGAGGCAGAGGCAGGTGGATTTCTGTGGAGTCAGTTTGCCCTaGAGTAGAGGTTTTAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: WCMSLIPILGRQRQVDFCGVSLP*SRGFRN Trigger: ATTTCTAAAACCTCTACTCCAGGGCAAACTGACTCC...ACAGAAATCCACCTGCCTCTGCCTCCCGAGTATTGGGATTAAAGACATGCACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR-3UTR GCA 90 bp | TCTTCTTGGGAAATGTCTGATTTTCCACTGAGAACCACAGTCCTGCTCCAAGTAATTGTGACCCACATTTaGAGAGTGTGGTTGGAGTCC | + |
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Preference number: 2 (lower is better) Translates to: SSWEMSDFPLRTTVLLQVIVTHI*RVWLES Trigger: GGACTCCAACCACACTCTGCAAATGTGGGTCACAAT...TACTTGGAGCAGGACTGTGGTTCTCAGTGGAAAATCAGACATTTCCCAAGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR CAA 90 bp | TTACAGTGCCTGCAGAACTCACAGACATCTTTATTATCAAGCTTTTaGATTGGAGATGCTACCTCAGAAGGAACCCCTAAGGGATGGGAC | + |
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Preference number: 2 (lower is better) Translates to: LQCLQNSQTSLLSSF*IGDATSEGTPKGWD Trigger: GTCCCATCCCTTAGGGGTTCCTTCTGAGGTAGCATCTCCAATCAAAAAGCTTGATAATAAAGATGTCTGTGAGTTCTGCAGGCACTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079681.6 |
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| 3UTR-3UTR CCA 90 bp | AATGAAGCTCAAGGACCTAGGGATATAGCTCAGTTGGTAAAGTGCTTGCCTAGCATTATCTCATCTCACTaGACCATCCCAGTTCTCATG | + |
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Preference number: 2 (lower is better) Translates to: NEAQGPRDIAQLVKCLPSIISSH*TIPVLM Trigger: CATGAGAACTGGGATGGTCCAGTGAGATGAGATAAT...GCTAGGCAAGCACTTTACCAACTGAGCTATATCCCTAGGTCCTTGAGCTTCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR-3UTR CCA 90 bp | AGCAATGAAGCTCAAGGACCTAGGGATATAGCTCAGTTGGTAAAGTGCTTGCCTATTATCTCATCTCACTaGACCATCCCAGTTCTCATG | + |
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Preference number: 2 (lower is better) Translates to: SNEAQGPRDIAQLVKCLPIISSH*TIPVLM Trigger: CATGAGAACTGGGATGGTCCAGTGAGATGAGATAAT...AGGCAAGCACTTTACCAACTGAGCTATATCCCTAGGTCCTTGAGCTTCATTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR-3UTR GCA 90 bp | AGCAATGAAGCTCAAGGACCTAGGGATATAGCTCAGTTGGTAAAGTGCTTGCCTTCAAGCCCCAGAATCTaGTACTCTAGTTTATTATCT | + |
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Preference number: 2 (lower is better) Translates to: SNEAQGPRDIAQLVKCLPSSPRI*YSSLLS Trigger: AGATAATAAACTAGAGTAGCAGATTCTGGGGCTTGA...AGGCAAGCACTTTACCAACTGAGCTATATCCCTAGGTCCTTGAGCTTCATTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR-3UTR GCA 90 bp | TGGAGCTCTCAGACTCCTTATCTGATCAATTCTATGTTGATTTCACTTTGTTCAATTGTGACCCACATTTaGAGAGTGTGGTTGGAGTCC | + |
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Preference number: 2 (lower is better) Translates to: WSSQTPYLINSMLISLCSIVTHI*RVWLES Trigger: GGACTCCAACCACACTCTGCAAATGTGGGTCACAAT...TGAACAAAGTGAAATCAACATAGAATTGATCAGATAAGGAGTCTGAGAGCTCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR GCA 72 bp | AGAAGAGCTGCGGCTGTGCAGCAGAGAACGGAATTCTaGAGCGGGGGTGAGAAACCTGCAGCGAAGCCTCTT | + |
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Preference number: 3 (lower is better) Translates to: RRAAAVQQRTEF*SGGEKPAAKPL Trigger: AAGAGGCTTCGCTGCAGGTTTCTCACCCCCGCTGCAGAATTCCGTTCTCTGCTGCACAGCCGCAGCTCTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR TCA 72 bp | GAAGGAACCCCTAAGGGATGGGACCAGTGCAGCAAGTaGGGGCTTTATGAGGATCTTGCAGGACATCATGGT | + |
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Preference number: 3 (lower is better) Translates to: EGTPKGWDQCSK*GLYEDLAGHHG Trigger: ACCATGATGTCCTGCAAGATCCTCATAAAGCCCTCACTTGCTGCACTGGTCCCATCCCTTAGGGGTTCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR GCA 72 bp | CTGTTTGATGCACACCAGGGCAGGGGGATTATGGTGTaGTCCATCTGTGTAAGTCAAGCCCCAGAATCTGCT | + |
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Preference number: 3 (lower is better) Translates to: LFDAHQGRGIMV*SICVSQAPESA Trigger: AGCAGATTCTGGGGCTTGACTTACACAGATGGAGCACACCATAATCCCCCTGCCCTGGTGTGCATCAAACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR-3UTR CAA 90 bp | AAGTACCAGCAGGACTGGCATGATGGGCAGAGTGCAAGCTCTGATTCAGGCAACAATTGTGACCCACATTaGCAGAGTGTGGTTGGAGTC | + |
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Preference number: 3 (lower is better) Translates to: KYQQDWHDGQSASSDSGNNCDPH*QSVVGV Trigger: GACTCCAACCACACTCTGCAAATGTGGGTCACAATT...GTTGCCTGAATCAGAGCTTGCACTCTGCCCATCATGCCAGTCCTGCTGGTACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR CCA 72 bp | TCAGCCAGTAGAATTGTGACCCACATTTGCAGAGTGTaGTTGGAGTCCTTGACACTCCTATTTCAGGCCAGG | + |
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Preference number: 3 (lower is better) Translates to: SASRIVTHICRV*LESLTLLFQAR Trigger: CCTGGCCTGAAATAGGAGTGTCAAGGACTCCAACCACACTCTGCAAATGTGGGTCACAATTCTACTGGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR-3UTR CAA 90 bp | TCAAGCTTTTTGATTGGAGATGCTACCTCAGAAGGAACCCCTAAGGGATGGGACAGTAAAGAAAGCTGTTaGATGCACACCAGGGCAGGG | + |
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Preference number: 3 (lower is better) Translates to: SSFLIGDATSEGTPKGWDSKESC*MHTRAG Trigger: CCCTGCCCTGGTGTGCATCAAACAGCTTTCTTTACT...GTCCCATCCCTTAGGGGTTCCTTCTGAGGTAGCATCTCCAATCAAAAAGCTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR-3UTR CAA 90 bp | GAAGCTCAAGGACCTAGGGATATAGCTCAGTTGGTAAAGTGCTTGCCTAGCATGATTTGCAGAGTGTGGTaGGAGTCCTTGACACTCCTA | + |
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Preference number: 3 (lower is better) Translates to: EAQGPRDIAQLVKCLPSMICRVW*ESLTLL Trigger: TAGGAGTGTCAAGGACTCCAACCACACTCTGCAAAT...CATGCTAGGCAAGCACTTTACCAACTGAGCTATATCCCTAGGTCCTTGAGCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR-3UTR CAA 90 bp | AGCAATGAAGCTCAAGGACCTAGGGATATAGCTCAGTTGGTAAAGTGCTTGCCTAATTGTGACCCACATTaGCAGAGTGTGGTTGGAGTC | + |
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Preference number: 3 (lower is better) Translates to: SNEAQGPRDIAQLVKCLPNCDPH*QSVVGV Trigger: GACTCCAACCACACTCTGCAAATGTGGGTCACAATT...AGGCAAGCACTTTACCAACTGAGCTATATCCCTAGGTCCTTGAGCTTCATTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR-3UTR CAA 90 bp | AGCAATGAAGCTCAAGGACCTAGGGATATAGCTCAGTTGGTAAAGTGCTTGCCTTCTCATGGAGTCAGTTaGCCCTGGAGTAGAGGTTTT | + |
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Preference number: 3 (lower is better) Translates to: SNEAQGPRDIAQLVKCLPSHGVS*PWSRGF Trigger: AAAACCTCTACTCCAGGGCAAACTGACTCCATGAGA...AGGCAAGCACTTTACCAACTGAGCTATATCCCTAGGTCCTTGAGCTTCATTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR-3UTR CAA 90 bp | TCAAGCTTTTTGATTGGAGATGCTACCTCAGAAGGAACCCCTAAGGGATGGGACGGCTTTATGAGGATCTaGCAGGACATCATGGTCAAA | + |
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Preference number: 3 (lower is better) Translates to: SSFLIGDATSEGTPKGWDGFMRI*QDIMVK Trigger: TTTGACCATGATGTCCTGCAAGATCCTCATAAAGCC...GTCCCATCCCTTAGGGGTTCCTTCTGAGGTAGCATCTCCAATCAAAAAGCTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR TCA 72 bp | GTGCAAAATCTTCTTGGGAAATGTCTGATTTTCCACTaGGAACCACAGTCCTGCTCCAAGTACCAGCAGGAC | + |
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Preference number: 3 (lower is better) Translates to: VQNLLGKCLIFH*EPQSCSKYQQD Trigger: GTCCTGCTGGTACTTGGAGCAGGACTGTGGTTCTCAGTGGAAAATCAGACATTTCCCAAGAAGATTTTGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR CCA 72 bp | GATTCAGGCAACACCAAGTCTACGGCAAGTCCCTTCTaGAGCTCTCAGACTCCTTATCTGATCAATTCTATG | + |
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Preference number: 3 (lower is better) Translates to: DSGNTKSTASPF*SSQTPYLINSM Trigger: CATAGAATTGATCAGATAAGGAGTCTGAGAGCTCCAGAAGGGACTTGCCGTAGACTTGGTGTTGCCTGAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR-3UTR CAA 90 bp | ATCCCAGTTCTCATGGAGTCAGTTTGCCCTGGAGTAGAGGTTTTAGAAATGTCAATTTGCAGAGTGTGGTaGGAGTCCTTGACACTCCTA | + |
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Preference number: 3 (lower is better) Translates to: IPVLMESVCPGVEVLEMSICRVW*ESLTLL Trigger: TAGGAGTGTCAAGGACTCCAACCACACTCTGCAAAT...TGACATTTCTAAAACCTCTACTCCAGGGCAAACTGACTCCATGAGAACTGGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR GCA 72 bp | TCTCACTGGACCATCCCAGTTCTCATGGAGTCAGTTTaGCCTGGAGTAGAGGTTTTAGAAATGTCACAAATG | + |
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Preference number: 3 (lower is better) Translates to: SHWTIPVLMESV*PGVEVLEMSQM Trigger: CATTTGTGACATTTCTAAAACCTCTACTCCAGGGCAAACTGACTCCATGAGAACTGGGATGGTCCAGTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR TCA 72 bp | AAATGTCAGAAGTTAAGAGCTCAGTCAATTACCCTGTaGCTTAGAACAGTTACCTTCATTTTACTAAGGTGC | + |
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Preference number: 3 (lower is better) Translates to: KCQKLRAQSITL*LRTVTFILLRC Trigger: GCACCTTAGTAAAATGAAGGTAACTGTTCTAAGTCACAGGGTAATTGACTGAGCTCTTAACTTCTGACATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| CDS-3UTR GCA 90 bp | ACAAGATCGAGGGCTTTCTGTAGATCTGGAAGGTTCTCCATGTGTCAGCCACATGACGCGGCCGAGCAGTaGCAAGTACAGGCCCGGGTC | + |
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Preference number: 4 (lower is better) Translates to: TRSRAFCRSGRFSMCQPHDAAEQ*QVQARV Trigger: GACCCGGGCCTGTACTTGGCACTGCTCGGCCGCGTC...ATGTGGCTGACACATGGAGAACCTTCCAGATCTACAGAAAGCCCTCGATCTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079681.6 |
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| CDS-3UTR CCA 90 bp | CTGTGCAGCAGAGAACGGAATTCTGCAGCGGGGGTGAGAAACCTGCAGCGAAGCACATGTGGTAGCCAGTaGTGGGCAGCCTGTGTATTC | + |
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Preference number: 4 (lower is better) Translates to: LCSRERNSAAGVRNLQRSTCGSQ*WAACVF Trigger: GAATACACAGGCTGCCCACCACTGGCTACCACATGT...GCTTCGCTGCAGGTTTCTCACCCCCGCTGCAGAATTCCGTTCTCTGCTGCACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| CDS-3UTR GCA 90 bp | CTGTGCAGCAGAGAACGGAATTCTGCAGCGGGGGTGAGAAACCTGCAGCGAAGCCCAATCCAGTCTCTGTaGACACCTCCACTCTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LCSRERNSAAGVRNLQRSPIQSL*TPPLFW Trigger: CCAAAAGAGTGGAGGTGTGCACAGAGACTGGATTGG...GCTTCGCTGCAGGTTTCTCACCCCCGCTGCAGAATTCCGTTCTCTGCTGCACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| CDS-3UTR CCA 90 bp | AAGTACCAGCAGGACTGGCATGATGGGCAGAGTGCAAGCTCTGATTCAGGCAACACACCTCCACTCTTTTaGGAGCACCAGAGCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KYQQDWHDGQSASSDSGNTPPLF*EHQSLL Trigger: CAGCAGGCTCTGGTGCTCCCAAAAGAGTGGAGGTGT...GTTGCCTGAATCAGAGCTTGCACTCTGCCCATCATGCCAGTCCTGCTGGTACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| CDS-3UTR CCA 90 bp | AAGTACCAGCAGGACTGGCATGATGGGCAGAGTGCAAGCTCTGATTCAGGCAACTGTGGTAGCCAGTGGTaGGCAGCCTGTGTATTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KYQQDWHDGQSASSDSGNCGSQW*AACVFF Trigger: GAAGAATACACAGGCTGCCCACCACTGGCTACCACA...GTTGCCTGAATCAGAGCTTGCACTCTGCCCATCATGCCAGTCCTGCTGGTACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
||
| CDS-3UTR GCA 90 bp | AATGAAGCTCAAGGACCTAGGGATATAGCTCAGTTGGTAAAGTGCTTGCCTAGCGCTCGTAGTGCCTCCTaGCAGAGGACACGTCGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: NEAQGPRDIAQLVKCLPSARSAS*QRTRRR Trigger: TCTACGACGTGTCCTCTGGCAGGAGGCACTACGAGC...GCTAGGCAAGCACTTTACCAACTGAGCTATATCCCTAGGTCCTTGAGCTTCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079681.6 |
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| 3UTR CAA 72 bp | GGGACCAGTGCAGCAAGTGAGGGCTTTATGAGGATCTaGCAGGACATCATGGTCAAAAAGTCAAGAGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GTSAASEGFMRI*QDIMVKKSRAL Trigger: CAGCGCTCTTGACTTTTTGACCATGATGTCCTGCAAGATCCTCATAAAGCCCTCACTTGCTGCACTGGTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| CDS-3UTR GCA 90 bp | TGGTGCATGTCTTTAATCCCAATACTCGGGAGGCAGAGGCAGGTGGATTTCTGTCCAATCCAGTCTCTGTaGACACCTCCACTCTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: WCMSLIPILGRQRQVDFCPIQSL*TPPLFW Trigger: CCAAAAGAGTGGAGGTGTGCACAGAGACTGGATTGG...ACAGAAATCCACCTGCCTCTGCCTCCCGAGTATTGGGATTAAAGACATGCACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
||
| CDS-3UTR GCA 90 bp | GAAGCTCAAGGACCTAGGGATATAGCTCAGTTGGTAAAGTGCTTGCCTAGCATGTGTCTAGGGTTGTCTTaGTGGTCACTAGGAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EAQGPRDIAQLVKCLPSMCLGLS*WSLGGP Trigger: TGGCCCTCCTAGTGACCAGCAAGACAACCCTAGACA...CATGCTAGGCAAGCACTTTACCAACTGAGCTATATCCCTAGGTCCTTGAGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| CDS-3UTR CCA 90 bp | GCTAGGGCACAAGATCGAGGGCTTTCTGTAGATCTGGAAGGTTCTCCATGTGTCGCTTATACAACTTCCTaGGGACACCAATCCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ARAQDRGLSVDLEGSPCVAYTTS*GHQSSL Trigger: GAGACTGGATTGGTGTCCCCAGGAAGTTGTATAAGC...GACACATGGAGAACCTTCCAGATCTACAGAAAGCCCTCGATCTTGTGCCCTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
||
| CDS-3UTR CCA 90 bp | TCAAGCTTTTTGATTGGAGATGCTACCTCAGAAGGAACCCCTAAGGGATGGGACTGTGGTAGCCAGTGGTaGGCAGCCTGTGTATTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSFLIGDATSEGTPKGWDCGSQW*AACVFF Trigger: GAAGAATACACAGGCTGCCCACCACTGGCTACCACA...GTCCCATCCCTTAGGGGTTCCTTCTGAGGTAGCATCTCCAATCAAAAAGCTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| CDS-3UTR CCA 90 bp | ACAAGATCGAGGGCTTTCTGTAGATCTGGAAGGTTCTCCATGTGTCAGCCACATACATGTGGTAGCCAGTaGTGGGCAGCCTGTGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: TRSRAFCRSGRFSMCQPHTCGSQ*WAACVF Trigger: GAATACACAGGCTGCCCACCACTGGCTACCACATGT...ATGTGGCTGACACATGGAGAACCTTCCAGATCTACAGAAAGCCCTCGATCTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| CDS-3UTR TCA 90 bp | AAGTACCAGCAGGACTGGCATGATGGGCAGAGTGCAAGCTCTGATTCAGGCAACATTTTTCTCGTAGAATaGAAGCCAGTTGTGCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: KYQQDWHDGQSASSDSGNIFLVE*KPVVQR Trigger: ACGCTGCACAACTGGCTTTCATTCTACGAGAAAAAT...GTTGCCTGAATCAGAGCTTGCACTCTGCCCATCATGCCAGTCCTGCTGGTACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079681.6 |
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| CDS-3UTR CCA 90 bp | CCCAGTTCTCATGGAGTCAGTTTGCCCTGGAGTAGAGGTTTTAGAAATGTCACACACAATGGGGCTCCTTaGCCCCTGGCTTATACAACT | + |
|
Preference number: 4 (lower is better) Translates to: PSSHGVSLPWSRGFRNVTHNGAP*PLAYTT Trigger: AGTTGTATAAGCCAGGGGCCAAGGAGCCCCATTGTG...TGTGACATTTCTAAAACCTCTACTCCAGGGCAAACTGACTCCATGAGAACTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
||
| 3UTR CAA 72 bp | CAAGGACCTAGGGATATAGCTCAGTTGGTAAAGTGCTaGCCTAGCATGTATGTGGCTCCGGTTCATTCAACC | + |
|
Preference number: 4 (lower is better) Translates to: QGPRDIAQLVKC*PSMYVAPVHST Trigger: GGTTGAATGAACCGGAGCCACATACATGCTAGGCAAGCACTTTACCAACTGAGCTATATCCCTAGGTCCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| CDS-3UTR GCA 90 bp | TGGTGCATGTCTTTAATCCCAATACTCGGGAGGCAGAGGCAGGTGGATTTCTGTAATGAAAGCCAGTTGTaGAGCGTCAGTATCTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: WCMSLIPILGRQRQVDFCNESQL*SVSISE Trigger: CTCTGAGATACTGACGCTGCACAACTGGCTTTCATT...ACAGAAATCCACCTGCCTCTGCCTCCCGAGTATTGGGATTAAAGACATGCACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079681.6 |
||
| CDS-3UTR GCA 90 bp | ATCCCAGTTCTCATGGAGTCAGTTTGCCCTGGAGTAGAGGTTTTAGAAATGTCATGTCTAGGGTTGTCTTaGTGGTCACTAGGAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IPVLMESVCPGVEVLEMSCLGLS*WSLGGP Trigger: TGGCCCTCCTAGTGACCAGCAAGACAACCCTAGACA...TGACATTTCTAAAACCTCTACTCCAGGGCAAACTGACTCCATGAGAACTGGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
||
| CDS-3UTR CCA 90 bp | TCTTCTTGGGAAATGTCTGATTTTCCACTGAGAACCACAGTCCTGCTCCAAGTACACAATGGGGCTCCTTaGCCCCTGGCTTATACAACT | + |
|
Preference number: 4 (lower is better) Translates to: SSWEMSDFPLRTTVLLQVHNGAP*PLAYTT Trigger: AGTTGTATAAGCCAGGGGCCAAGGAGCCCCATTGTG...TACTTGGAGCAGGACTGTGGTTCTCAGTGGAAAATCAGACATTTCCCAAGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
||
| CDS-3UTR GCA 90 bp | GAAGCTCAAGGACCTAGGGATATAGCTCAGTTGGTAAAGTGCTTGCCTAGCATGTTGTTCCTGTTCATTTaGCTCCATGCCTTTAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: EAQGPRDIAQLVKCLPSMLFLFI*LHAFSH Trigger: GTGACTAAAGGCATGGAGGCAAATGAACAGGAACAA...CATGCTAGGCAAGCACTTTACCAACTGAGCTATATCCCTAGGTCCTTGAGCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
||
| CDS-3UTR GCA 90 bp | ACAAGATCGAGGGCTTTCTGTAGATCTGGAAGGTTCTCCATGTGTCAGCCACATTTGTTCCTGTTCATTTaGCTCCATGCCTTTAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TRSRAFCRSGRFSMCQPHLFLFI*LHAFSH Trigger: GTGACTAAAGGCATGGAGGCAAATGAACAGGAACAA...ATGTGGCTGACACATGGAGAACCTTCCAGATCTACAGAAAGCCCTCGATCTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| CDS-3UTR CCA 90 bp | GCAAAATCTTCTTGGGAAATGTCTGATTTTCCACTGAGAACCACAGTCCTGCTCCCACTCGGAATTGCATaGTGGGAACTTCTGCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: AKSSWEMSDFPLRTTVLLPLGIA*WELLLF Trigger: GAAAAGCAGAAGTTCCCACCATGCAATTCCGAGTGG...GAGCAGGACTGTGGTTCTCAGTGGAAAATCAGACATTTCCCAAGAAGATTTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
||
| CDS-3UTR CCA 90 bp | TCTTCTTGGGAAATGTCTGATTTTCCACTGAGAACCACAGTCCTGCTCCAAGTAGCTTATACAACTTCCTaGGGACACCAATCCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSWEMSDFPLRTTVLLQVAYTTS*GHQSSL Trigger: GAGACTGGATTGGTGTCCCCAGGAAGTTGTATAAGC...TACTTGGAGCAGGACTGTGGTTCTCAGTGGAAAATCAGACATTTCCCAAGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| CDS-3UTR CCA 90 bp | CCCAGTTCTCATGGAGTCAGTTTGCCCTGGAGTAGAGGTTTTAGAAATGTCACATGTATTCTTCCAAGTTaGGGTTGTCCAAGTCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PSSHGVSLPWSRGFRNVTCILPS*GCPSPH Trigger: ATGGGGACTTGGACAACCCCAACTTGGAAGAATACA...TGTGACATTTCTAAAACCTCTACTCCAGGGCAAACTGACTCCATGAGAACTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
||
| CDS-3UTR GCA 90 bp | AGCAATGAAGCTCAAGGACCTAGGGATATAGCTCAGTTGGTAAAGTGCTTGCCTCATGGTGGGAACTTCTaGTTTTCTCTTTGTTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SNEAQGPRDIAQLVKCLPHGGNF*FSLCSC Trigger: ACAGGAACAAAGAGAAAAGCAGAAGTTCCCACCATG...AGGCAAGCACTTTACCAACTGAGCTATATCCCTAGGTCCTTGAGCTTCATTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| CDS-3UTR CCA 90 bp | TCTTCTTGGGAAATGTCTGATTTTCCACTGAGAACCACAGTCCTGCTCCAAGTACTCGGAATTGCATGGTaGGAACTTCTGCTTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSWEMSDFPLRTTVLLQVLGIAW*ELLLFS Trigger: AGAGAAAAGCAGAAGTTCCCACCATGCAATTCCGAG...TACTTGGAGCAGGACTGTGGTTCTCAGTGGAAAATCAGACATTTCCCAAGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| CDS-3UTR CCA 90 bp | GCAAAATCTTCTTGGGAAATGTCTGATTTTCCACTGAGAACCACAGTCCTGCTCCTCGGAATTGCATGGTaGGAACTTCTGCTTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AKSSWEMSDFPLRTTVLLLGIAW*ELLLFS Trigger: AGAGAAAAGCAGAAGTTCCCACCATGCAATTCCGAG...GAGCAGGACTGTGGTTCTCAGTGGAAAATCAGACATTTCCCAAGAAGATTTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR CAA 72 bp | ATCTCACTGGACCATCCCAGTTCTCATGGAGTCAGTTaGCCCTGGAGTAGAGGTTTTAGAAATGTCACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ISLDHPSSHGVS*PWSRGFRNVTN Trigger: ATTTGTGACATTTCTAAAACCTCTACTCCAGGGCAAACTGACTCCATGAGAACTGGGATGGTCCAGTGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| 3UTR CAA 72 bp | CAACTTTTCACTAGCAATATGAGTAAAGAAAGCTGTTaGATGCACACCAGGGCAGGGGGATTATGGTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QLFTSNMSKESC*MHTRAGGLWCA Trigger: AGCACACCATAATCCCCCTGCCCTGGTGTGCATCAAACAGCTTTCTTTACTCATATTGCTAGTGAAAAGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| CDS-3UTR GCA 90 bp | ATCCCAGTTCTCATGGAGTCAGTTTGCCCTGGAGTAGAGGTTTTAGAAATGTCACATGGTGGGAACTTCTaGTTTTCTCTTTGTTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IPVLMESVCPGVEVLEMSHGGNF*FSLCSC Trigger: ACAGGAACAAAGAGAAAAGCAGAAGTTCCCACCATG...TGACATTTCTAAAACCTCTACTCCAGGGCAAACTGACTCCATGAGAACTGGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| CDS-3UTR CCA 90 bp | TGGAGCTCTCAGACTCCTTATCTGATCAATTCTATGTTGATTTCACTTTGTTCACTAGGGTTGTCTTGCTaGTCACTAGGAGGGCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: WSSQTPYLINSMLISLCSLGLSC*SLGGPV Trigger: AACTGGCCCTCCTAGTGACCAGCAAGACAACCCTAG...TGAACAAAGTGAAATCAACATAGAATTGATCAGATAAGGAGTCTGAGAGCTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| CDS-3UTR CCA 90 bp | TGGAGCTCTCAGACTCCTTATCTGATCAATTCTATGTTGATTTCACTTTGTTCACCACTCGGAATTGCATaGTGGGAACTTCTGCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: WSSQTPYLINSMLISLCSPLGIA*WELLLF Trigger: GAAAAGCAGAAGTTCCCACCATGCAATTCCGAGTGG...TGAACAAAGTGAAATCAACATAGAATTGATCAGATAAGGAGTCTGAGAGCTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| CDS-3UTR CCA 90 bp | TGGAGCTCTCAGACTCCTTATCTGATCAATTCTATGTTGATTTCACTTTGTTCATGTATTCTTCCAAGTTaGGGTTGTCCAAGTCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: WSSQTPYLINSMLISLCSCILPS*GCPSPH Trigger: ATGGGGACTTGGACAACCCCAACTTGGAAGAATACA...TGAACAAAGTGAAATCAACATAGAATTGATCAGATAAGGAGTCTGAGAGCTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| CDS GCA 90 bp | GTAGTGCCTCCTGCCAGAGGACACGTCGTAGACGCGGCCGAGCAGTaGCAAGTACAGGCCCGGGTCCCCTGGGCCGCCGCGATAGCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VVPPARGHVVDAAEQ*QVQARVPWAAAIAG Trigger: GCCCGCTATCGCGGCGGCCCAGGGGACCCGGGCCTGTACTTGGCACTGCTCGGCCGCGTCTACGACGTGTCCTCTGGCAGGAGGCACTAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079681.6 |
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| CDS GCA 90 bp | GGCCTGCGAAGCCGCTATAGTGCGCCCCAGGCTCGTAGTGCCTCCTaGCAGAGGACACGTCGTAGACGCGGCCGAGCAGTGCCAAGTACA | + |
|
Preference number: 5 (lower is better) Translates to: GLRSRYSAPQARSAS*QRTRRRRGRAVPST Trigger: TGTACTTGGCACTGCTCGGCCGCGTCTACGACGTGTCCTCTGGCAGGAGGCACTACGAGCCTGGGGCGCACTATAGCGGCTTCGCAGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079681.6 |
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| CDS GCA 90 bp | CACAAGACCGGCTTCAGAATAGTCTCCTGTCACAAATGCTCTGGATaGATCCCGGCCTGCGAAGCCGCTATAGTGCGCCCCAGGCTCGTA | + |
|
Preference number: 5 (lower is better) Translates to: HKTGFRIVSCHKCSG*IPACEAAIVRPRLV Trigger: TACGAGCCTGGGGCGCACTATAGCGGCTTCGCAGGCCGGGATGCATCCAGAGCATTTGTGACAGGAGACTATTCTGAAGCCGGTCTTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079681.6 |
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| CDS CCA 90 bp | CATCCACAAGACCGGCTTCAGAATAGTCTCCTGTCACAAATGCTCTaGATGCATCCCGGCCTGCGAAGCCGCTATAGTGCGCCCCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: HPQDRLQNSLLSQML*MHPGLRSRYSAPQA Trigger: AGCCTGGGGCGCACTATAGCGGCTTCGCAGGCCGGGATGCATCCAGAGCATTTGTGACAGGAGACTATTCTGAAGCCGGTCTTGTGGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079681.6 |
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| CDS-3UTR CAA 90 bp | CTGTGCAGCAGAGAACGGAATTCTGCAGCGGGGGTGAGAAACCTGCAGCGAAGCACACAATGGGGCTCCTaGGCCCCTGGCTTATACAAC | + |
|
Preference number: 5 (lower is better) Translates to: LCSRERNSAAGVRNLQRSTQWGS*APGLYN Trigger: GTTGTATAAGCCAGGGGCCAAGGAGCCCCATTGTGT...GCTTCGCTGCAGGTTTCTCACCCCCGCTGCAGAATTCCGTTCTCTGCTGCACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| CDS CCA 90 bp | TCTTGCTGGTCACTAGGAGGGCCAGTTGTTCTCACACACACACAATaGGGCTCCTTGGCCCCTGGCTTATACAACTTCCTGGGGACACCA | + |
|
Preference number: 5 (lower is better) Translates to: SCWSLGGPVVLTHTQ*GSLAPGLYNFLGTP Trigger: TGGTGTCCCCAGGAAGTTGTATAAGCCAGGGGCCAAGGAGCCCCATTGTGTGTGTGTGAGAACAACTGGCCCTCCTAGTGACCAGCAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| CDS GCA 90 bp | TATATCATCCACAAGACCGGCTTCAGAATAGTCTCCTGTCACAAATaGTCTGGATGCATCCCGGCCTGCGAAGCCGCTATAGTGCGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: YIIHKTGFRIVSCHK*SGCIPACEAAIVRP Trigger: GGGGCGCACTATAGCGGCTTCGCAGGCCGGGATGCATCCAGAGCATTTGTGACAGGAGACTATTCTGAAGCCGGTCTTGTGGATGATATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079681.6 |
||
| CDS TCA 90 bp | GGGCAGCCTGTGTATTCTTCCAAGTTGGGGTTGTCCAAGTCCCCATaGTTTGAGTGTCTAGGGTTGTCTTGCTGGTCACTAGGAGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GQPVYSSKLGLSKSP*FECLGLSCWSLGGP Trigger: TGGCCCTCCTAGTGACCAGCAAGACAACCCTAGACACTCAAATCATGGGGACTTGGACAACCCCAACTTGGAAGAATACACAGGCTGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
||
| CDS-3UTR CAA 90 bp | TGGTGCATGTCTTTAATCCCAATACTCGGGAGGCAGAGGCAGGTGGATTTCTGTCACACCTCCACTCTTTaGGGAGCACCAGAGCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: WCMSLIPILGRQRQVDFCHTSTL*GAPEPA Trigger: AGCAGGCTCTGGTGCTCCCAAAAGAGTGGAGGTGTG...ACAGAAATCCACCTGCCTCTGCCTCCCGAGTATTGGGATTAAAGACATGCACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
||
| CDS CCA 90 bp | GCACCAGAGCCTGCTGCCCTTAGCAGAGCTCCACTCGGAATTGCATaGTGGGAACTTCTGCTTTTCTCTTTGTTCCTGTTCATTTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: APEPAALSRAPLGIA*WELLLFSLFLFICL Trigger: GAGGCAAATGAACAGGAACAAAGAGAAAAGCAGAAGTTCCCACCATGCAATTCCGAGTGGAGCTCTGCTAAGGGCAGCAGGCTCTGGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
||
| CDS CCA 90 bp | CCAGAGCCTGCTGCCCTTAGCAGAGCTCCACTCGGAATTGCATGGTaGGAACTTCTGCTTTTCTCTTTGTTCCTGTTCATTTGCCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PEPAALSRAPLGIAW*ELLLFSLFLFICLH Trigger: ATGGAGGCAAATGAACAGGAACAAAGAGAAAAGCAGAAGTTCCCACCATGCAATTCCGAGTGGAGCTCTGCTAAGGGCAGCAGGCTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
||
| CDS-3UTR CAA 90 bp | AGCAATGAAGCTCAAGGACCTAGGGATATAGCTCAGTTGGTAAAGTGCTTGCCTCACACCTCCACTCTTTaGGGAGCACCAGAGCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SNEAQGPRDIAQLVKCLPHTSTL*GAPEPA Trigger: AGCAGGCTCTGGTGCTCCCAAAAGAGTGGAGGTGTG...AGGCAAGCACTTTACCAACTGAGCTATATCCCTAGGTCCTTGAGCTTCATTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
||
| CDS-3UTR CAA 90 bp | AATGAAGCTCAAGGACCTAGGGATATAGCTCAGTTGGTAAAGTGCTTGCCTAGCACACAATGGGGCTCCTaGGCCCCTGGCTTATACAAC | + |
|
Preference number: 5 (lower is better) Translates to: NEAQGPRDIAQLVKCLPSTQWGS*APGLYN Trigger: GTTGTATAAGCCAGGGGCCAAGGAGCCCCATTGTGT...GCTAGGCAAGCACTTTACCAACTGAGCTATATCCCTAGGTCCTTGAGCTTCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
||
| CDS GCA 90 bp | CTGCCCTTAGCAGAGCTCCACTCGGAATTGCATGGTGGGAACTTCTaGTTTTCTCTTTGTTCCTGTTCATTTGCCTCCATGCCTTTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LPLAELHSELHGGNF*FSLCSCSFASMPLV Trigger: GACTAAAGGCATGGAGGCAAATGAACAGGAACAAAGAGAAAAGCAGAAGTTCCCACCATGCAATTCCGAGTGGAGCTCTGCTAAGGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
||
| CDS TCA 90 bp | CCTTCCAACCAGTCTTCCGACAAATACATAATTTTTCTCGTAGAATaGAAGCCAGTTGTGCAGCGTCAGTATCTCAGAGGAGGACAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PSNQSSDKYIIFLVE*KPVVQRQYLRGGQA Trigger: GGCTTGTCCTCCTCTGAGATACTGACGCTGCACAACTGGCTTTCATTCTACGAGAAAAATTATGTATTTGTCGGAAGACTGGTTGGAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079681.6 |
||
| CDS GCA 72 bp | CCTGCCAGAGGACACGTCGTAGACGCGGCCGAGCAGTaGCAAGTACAGGCCCGGGTCCCCTGGGCCGCCGCG | + |
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Preference number: 6 (lower is better) Translates to: PARGHVVDAAEQ*QVQARVPWAAA Trigger: CGCGGCGGCCCAGGGGACCCGGGCCTGTACTTGGCACTGCTCGGCCGCGTCTACGACGTGTCCTCTGGCAGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079681.6 |
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| CDS GCA 72 bp | AGCCGCTATAGTGCGCCCCAGGCTCGTAGTGCCTCCTaGCAGAGGACACGTCGTAGACGCGGCCGAGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: SRYSAPQARSAS*QRTRRRRGRAV Trigger: CACTGCTCGGCCGCGTCTACGACGTGTCCTCTGGCAGGAGGCACTACGAGCCTGGGGCGCACTATAGCGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079681.6 |
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| CDS GCA 72 bp | GGCTTCAGAATAGTCTCCTGTCACAAATGCTCTGGATaGATCCCGGCCTGCGAAGCCGCTATAGTGCGCCCC | + |
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Preference number: 6 (lower is better) Translates to: GFRIVSCHKCSG*IPACEAAIVRP Trigger: GGGGCGCACTATAGCGGCTTCGCAGGCCGGGATGCATCCAGAGCATTTGTGACAGGAGACTATTCTGAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079681.6 |
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| CDS CCA 72 bp | GACCGGCTTCAGAATAGTCTCCTGTCACAAATGCTCTaGATGCATCCCGGCCTGCGAAGCCGCTATAGTGCG | + |
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Preference number: 6 (lower is better) Translates to: DRLQNSLLSQML*MHPGLRSRYSA Trigger: CGCACTATAGCGGCTTCGCAGGCCGGGATGCATCCAGAGCATTTGTGACAGGAGACTATTCTGAAGCCGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079681.6 |
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| CDS CCA 72 bp | AATGGGGCTCCTTGGCCCCTGGCTTATACAACTTCCTaGGGACACCAATCCAGTCTCTGTGCACACCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: NGAPWPLAYTTS*GHQSSLCAHLH Trigger: GTGGAGGTGTGCACAGAGACTGGATTGGTGTCCCCAGGAAGTTGTATAAGCCAGGGGCCAAGGAGCCCCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| CDS CCA 72 bp | TCACTAGGAGGGCCAGTTGTTCTCACACACACACAATaGGGCTCCTTGGCCCCTGGCTTATACAACTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: SLGGPVVLTHTQ*GSLAPGLYNFL Trigger: CAGGAAGTTGTATAAGCCAGGGGCCAAGGAGCCCCATTGTGTGTGTGTGAGAACAACTGGCCCTCCTAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| CDS CAA 90 bp | TGGGAGCACCAGAGCCTGCTGCCCTTAGCAGAGCTCCACTCGGAATaGCATGGTGGGAACTTCTGCTTTTCTCTTTGTTCCTGTTCATTT | + |
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Preference number: 6 (lower is better) Translates to: WEHQSLLPLAELHSE*HGGNFCFSLCSCSF Trigger: AAATGAACAGGAACAAAGAGAAAAGCAGAAGTTCCCACCATGCAATTCCGAGTGGAGCTCTGCTAAGGGCAGCAGGCTCTGGTGCTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079681.6 ENSMUST00000156294.8 |
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| CDS TCA 72 bp | CAGTCTTCCGACAAATACATAATTTTTCTCGTAGAATaGAAGCCAGTTGTGCAGCGTCAGTATCTCAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: QSSDKYIIFLVE*KPVVQRQYLRG Trigger: TCCTCTGAGATACTGACGCTGCACAACTGGCTTTCATTCTACGAGAAAAATTATGTATTTGTCGGAAGACTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079681.6 |
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