Pregenerated sensors for CYB5D1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044795Ensembl transcript IDs: ENSMUST00000051620.5, ENSMUST00000108660.8
Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTTTCCTAGAGCTCTGTGAGGTCATCATTGAAGTAGAGCAGTATTaGAGGTGTGTGAAGTTTACCATCCATGTTAAGATAGTCAAACTC | + |
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Preference number: 1 (lower is better) Translates to: PFLELCEVIIEVEQY*RCVKFTIHVKIVKL Trigger: GAGTTTGACTATCTTAACATGGATGGTAAACTTCACACACCTGCAATACTGCTCTACTTCAATGATGACCTCACAGAGCTCTAGGAAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108660.8 |
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| 3UTR-3UTR TCA 90 bp | GGCACAGAAAGAGGCAAACTCCAACATCTTGAGTCTACACGCACATCTCCTTTCAGTATTGCAGGTGTGTaGAGTTTACCATCCATGTTA | + |
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Preference number: 2 (lower is better) Translates to: GTERGKLQHLESTRTSPFSIAGV*SLPSML Trigger: TAACATGGATGGTAAACTTCACACACCTGCAATACT...GAAAGGAGATGTGCGTGTAGACTCAAGATGTTGGAGTTTGCCTCTTTCTGTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108660.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGAAAGAGGCAAACTCCAACATCTTGAGTCTACACGCACATCTCCTTTCCTAGAAGTAGAGCAGTATTaGAGGTGTGTGAAGTTTACC | + |
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Preference number: 2 (lower is better) Translates to: TERGKLQHLESTRTSPFLEVEQY*RCVKFT Trigger: GGTAAACTTCACACACCTGCAATACTGCTCTACTTC...TAGGAAAGGAGATGTGCGTGTAGACTCAAGATGTTGGAGTTTGCCTCTTTCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108660.8 |
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| 3UTR TCA 72 bp | CCCTCAAGGCACAGAAAGAGGCAAACTCCAACATCTTaGGTCTACACGCACATCTCCTTTCCTAGAGCTCTG | + |
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Preference number: 3 (lower is better) Translates to: PSRHRKRQTPTS*VYTHISFPRAL Trigger: CAGAGCTCTAGGAAAGGAGATGTGCGTGTAGACTCAAGATGTTGGAGTTTGCCTCTTTCTGTGCCTTGAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108660.8 |
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| 3UTR TCA 72 bp | AAGTTTTGCCTGAGCCTTACTTCCTCCTCATATTCCTaGGAGACTCTAGCTCTCTTACAGGGATTCTTTCTA | + |
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Preference number: 3 (lower is better) Translates to: KFCLSLTSSSYS*ETLALLQGFFL Trigger: TAGAAAGAATCCCTGTAAGAGAGCTAGAGTCTCTCAGGAATATGAGGAGGAAGTAAGGCTCAGGCAAAACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108660.8 |
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| CDS-3UTR TCA 90 bp | CTCATATTCCTGAGAGACTCTAGCTCTCTTACAGGGATTCTTTCTAGGACCCCTTGTGGATCAAACCAGTaGCTTATGTCCTGGCCTGCG | + |
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Preference number: 4 (lower is better) Translates to: LIFLRDSSSLTGILSRTPCGSNQ*LMSWPA Trigger: CGCAGGCCAGGACATAAGTCACTGGTTTGATCCACA...AGGGGTCCTAGAAAGAATCCCTGTAAGAGAGCTAGAGTCTCTCAGGAATATGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108660.8 |
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| CDS-3UTR GCA 90 bp | CTCATATTCCTGAGAGACTCTAGCTCTCTTACAGGGATTCTTTCTAGGACCCCTTGTAGCTGCAGTGTGTaGTCCTGCGTTGCAAGAGTG | + |
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Preference number: 4 (lower is better) Translates to: LIFLRDSSSLTGILSRTPCSCSV*SCVARV Trigger: CACTCTTGCAACGCAGGAGCACACACTGCAGCTACA...AGGGGTCCTAGAAAGAATCCCTGTAAGAGAGCTAGAGTCTCTCAGGAATATGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108660.8 |
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| CDS-3UTR TCA 90 bp | CCTTGCATGTCAGAAAGGCCCAAGAACCACGGACTGATTCTCAGAAGGGAACAGGTGAAATACCGACGTTaGAAATTATCCAAGTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: PCMSERPKNHGLILRREQVKYRR*KLSKSG Trigger: GCCAGACTTGGATAATTTTCAACGTCGGTATTTCAC...CTGTTCCCTTCTGAGAATCAGTCCGTGGTTCTTGGGCCTTTCTGACATGCAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108660.8 |
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| CDS-3UTR GCA 90 bp | CTTTCCCTCAAGGCACAGAAAGAGGCAAACTCCAACATCTTGAGTCTACACGCATGCAGTGTGTGCTCCTaGGTTGCAAGAGTGTTAATA | + |
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Preference number: 4 (lower is better) Translates to: LSLKAQKEANSNILSLHACSVCS*VARVLI Trigger: TATTAACACTCTTGCAACGCAGGAGCACACACTGCA...TGCGTGTAGACTCAAGATGTTGGAGTTTGCCTCTTTCTGTGCCTTGAGGGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108660.8 |
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| CDS-3UTR TCA 90 bp | TATTGCAGGTGTGTGAAGTTTACCATCCATGTTAAGATAGTCAAACTCTTCTTCACAGTAGGTCCCCTTTaGATTCCTCGACAAGCGGTG | + |
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Preference number: 4 (lower is better) Translates to: YCRCVKFTIHVKIVKLFFTVGPL*IPRQAV Trigger: CACCGCTTGTCGAGGAATTCAAAGGGGACCTACTGT...GAAGAAGAGTTTGACTATCTTAACATGGATGGTAAACTTCACACACCTGCAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108660.8 |
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| CDS-3UTR CAA 90 bp | CACGGACTGATTCTCAGAAGGGAACAGAGGTGTAGGCCAGGCCCCACAGACCCAGTCCCACCTGGTAATTaGCCCCCTTCCACCAGGGTA | + |
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Preference number: 5 (lower is better) Translates to: HGLILRREQRCRPGPTDPVPPGN*PPSTRV Trigger: TACCCTGGTGGAAGGGGGCAAATTACCAGGTGGGAC...TGGGTCTGTGGGGCCTGGCCTACACCTCTGTTCCCTTCTGAGAATCAGTCCGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108660.8 |
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| CDS TCA 90 bp | AGCTGGTTGTGTTCCGCTACTTCTGACGGCGTGAAATACCGACGTTaGAAATTATCCAAGTCTGGCCCGGCTACTAGGCCCCGGCGCGGC | + |
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Preference number: 5 (lower is better) Translates to: SWLCSATSDGVKYRR*KLSKSGPATRPRRG Trigger: GCCGCGCCGGGGCCTAGTAGCCGGGCCAGACTTGGATAATTTTCAACGTCGGTATTTCACGCCGTCAGAAGTAGCGGAACACAACCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051620.5 ENSMUST00000108660.8 |
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| CDS TCA 90 bp | CCCATAGGTCCTCGAGCTGGTTGTGTTCCGCTACTTCTGACGGCGTaGAATACCGACGTTGAAAATTATCCAAGTCTGGCCCGGCTACTA | + |
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Preference number: 5 (lower is better) Translates to: PIGPRAGCVPLLLTA*NTDVENYPSLARLL Trigger: TAGTAGCCGGGCCAGACTTGGATAATTTTCAACGTCGGTATTTCACGCCGTCAGAAGTAGCGGAACACAACCAGCTCGAGGACCTATGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051620.5 ENSMUST00000108660.8 |
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| CDS CCA 90 bp | TACGAAGCGGCCCCGCGGGGTACGGTATCTCATGCAACCAGTGAGTaGATCTATATGCTTGCGAATGTCTCTAGTCTGTGGATCAAACCA | + |
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Preference number: 5 (lower is better) Translates to: YEAAPRGTVSHATSE*IYMLANVSSLWIKP Trigger: TGGTTTGATCCACAGACTAGAGACATTCGCAAGCATATAGATCCACTCACTGGTTGCATGAGATACCGTACCCCGCGGGGCCGCTTCGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051620.5 ENSMUST00000108660.8 |
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| CDS TCA 90 bp | CCTGGCCTGCGACCTCCAGGATGGGTTTCAACAGTAGGTCCCCTTTaGATTCCTCGACAAGCGGTGTTAGATTGTAAACAAATCCCAGGT | + |
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Preference number: 5 (lower is better) Translates to: PGLRPPGWVSTVGPL*IPRQAVLDCKQIPG Trigger: ACCTGGGATTTGTTTACAATCTAACACCGCTTGTCGAGGAATTCAAAGGGGACCTACTGTTGAAACCCATCCTGGAGGTCGCAGGCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051620.5 ENSMUST00000108660.8 |
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| CDS CCA 90 bp | GCAACCAGTGAGTGGATCTATATGCTTGCGAATGTCTCTAGTCTGTaGATCAAACCAGTGACTTATGTCCTGGCCTGCGACCTCCAGGAT | + |
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Preference number: 5 (lower is better) Translates to: ATSEWIYMLANVSSL*IKPVTYVLACDLQD Trigger: ATCCTGGAGGTCGCAGGCCAGGACATAAGTCACTGGTTTGATCCACAGACTAGAGACATTCGCAAGCATATAGATCCACTCACTGGTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051620.5 ENSMUST00000108660.8 |
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| CDS TCA 90 bp | GGATCTATATGCTTGCGAATGTCTCTAGTCTGTGGATCAAACCAGTaGCTTATGTCCTGGCCTGCGACCTCCAGGATGGGTTTCAACAGT | + |
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Preference number: 5 (lower is better) Translates to: GSICLRMSLVCGSNQ*LMSWPATSRMGFNS Trigger: ACTGTTGAAACCCATCCTGGAGGTCGCAGGCCAGGACATAAGTCACTGGTTTGATCCACAGACTAGAGACATTCGCAAGCATATAGATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051620.5 ENSMUST00000108660.8 |
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| CDS GCA 90 bp | AATTCTTCCCATCGTATTTCCATGTGTAGCTGCAGTGTGTGCTCCTaGGTTGCAAGAGTGTTAATAATACGGATGTTCCGGGTCCGAGCA | + |
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Preference number: 5 (lower is better) Translates to: NSSHRISMCSCSVCS*VARVLIIRMFRVRA Trigger: TGCTCGGACCCGGAACATCCGTATTATTAACACTCTTGCAACGCAGGAGCACACACTGCAGCTACACATGGAAATACGATGGGAAGAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108660.8 |
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| CDS GCA 90 bp | TGTTCAAATTCTTCCCATCGTATTTCCATGTGTAGCTGCAGTGTGTaGTCCTGCGTTGCAAGAGTGTTAATAATACGGATGTTCCGGGTC | + |
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Preference number: 5 (lower is better) Translates to: CSNSSHRISMCSCSV*SCVARVLIIRMFRV Trigger: GACCCGGAACATCCGTATTATTAACACTCTTGCAACGCAGGAGCACACACTGCAGCTACACATGGAAATACGATGGGAAGAATTTGAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108660.8 |
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| CDS CCA 90 bp | TTTGATCCATGTTCAAATTCTTCCCATCGTATTTCCATGTGTAGCTaGCAGCATGTGCATTATAGGGGAGATAGCGGTGTAGGATTTCCC | + |
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Preference number: 5 (lower is better) Translates to: FDPCSNSSHRISMCS*QHVHYRGDSGVGFP Trigger: GGGAAATCCTACACCGCTATCTCCCCTATAATGCACATGCTGCCAGCTACACATGGAAATACGATGGGAAGAATTTGAACATGGATCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051620.5 |
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| CDS-3UTR CAA 90 bp | TATTGCAGGTGTGTGAAGTTTACCATCCATGTTAAGATAGTCAAACTCTTCTTCCGTGAAATACCGACGTaGAAAATTATCCAAGTCTGG | + |
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Preference number: 5 (lower is better) Translates to: YCRCVKFTIHVKIVKLFFREIPT*KIIQVW Trigger: CCAGACTTGGATAATTTTCAACGTCGGTATTTCACG...GAAGAAGAGTTTGACTATCTTAACATGGATGGTAAACTTCACACACCTGCAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108660.8 |
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| CDS CAA 72 bp | TCCGGGTCCGAGCAGACAGTCGTCCCACCTGGTAATTaGCCCCCTTCCACCAGGGTACTCCGAAATCATTGG | + |
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Preference number: 6 (lower is better) Translates to: SGSEQTVVPPGN*PPSTRVLRNHW Trigger: CCAATGATTTCGGAGTACCCTGGTGGAAGGGGGCAAATTACCAGGTGGGACGACTGTCTGCTCGGACCCGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051620.5 ENSMUST00000108660.8 |
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| CDS CAA 90 bp | TACGGATGTTCCGGGTCCGAGCAGACAGTCGTCCCACCTGGTAATTaGCCCCCTTCCACCAGGGTACTCCGAAATCATTGGCCCAATCTG | + |
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Preference number: 6 (lower is better) Translates to: YGCSGSEQTVVPPGN*PPSTRVLRNHWPNL Trigger: CAGATTGGGCCAATGATTTCGGAGTACCCTGGTGGAAGGGGGCAAATTACCAGGTGGGACGACTGTCTGCTCGGACCCGGAACATCCGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051620.5 ENSMUST00000108660.8 |
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| CDS CCA 72 bp | AATTTGCCCCCTTCCACCAGGGTACTCCGAAATCATTaGCCCAATCTGAACGGGGCAGTGGCGGCGGGATAT | + |
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Preference number: 6 (lower is better) Translates to: NLPPSTRVLRNH*PNLNGAVAAGY Trigger: ATATCCCGCCGCCACTGCCCCGTTCAGATTGGGCCAATGATTTCGGAGTACCCTGGTGGAAGGGGGCAAATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051620.5 ENSMUST00000108660.8 |
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| CDS CCA 72 bp | GCCCCGCGGGGTACGGTATCTCATGCAACCAGTGAGTaGATCTATATGCTTGCGAATGTCTCTAGTCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: APRGTVSHATSE*IYMLANVSSLW Trigger: CCACAGACTAGAGACATTCGCAAGCATATAGATCCACTCACTGGTTGCATGAGATACCGTACCCCGCGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051620.5 ENSMUST00000108660.8 |
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| CDS TCA 72 bp | TGTTCCGCTACTTCTGACGGCGTGAAATACCGACGTTaGAAATTATCCAAGTCTGGCCCGGCTACTAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: CSATSDGVKYRR*KLSKSGPATRP Trigger: GGGCCTAGTAGCCGGGCCAGACTTGGATAATTTTCAACGTCGGTATTTCACGCCGTCAGAAGTAGCGGAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051620.5 ENSMUST00000108660.8 |
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| CDS TCA 72 bp | TGCTTGCGAATGTCTCTAGTCTGTGGATCAAACCAGTaGCTTATGTCCTGGCCTGCGACCTCCAGGATGGGT | + |
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Preference number: 6 (lower is better) Translates to: CLRMSLVCGSNQ*LMSWPATSRMG Trigger: ACCCATCCTGGAGGTCGCAGGCCAGGACATAAGTCACTGGTTTGATCCACAGACTAGAGACATTCGCAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051620.5 ENSMUST00000108660.8 |
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| CDS TCA 72 bp | CCTCGAGCTGGTTGTGTTCCGCTACTTCTGACGGCGTaGAATACCGACGTTGAAAATTATCCAAGTCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: PRAGCVPLLLTA*NTDVENYPSLA Trigger: GGCCAGACTTGGATAATTTTCAACGTCGGTATTTCACGCCGTCAGAAGTAGCGGAACACAACCAGCTCGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051620.5 ENSMUST00000108660.8 |
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| CDS CCA 72 bp | GAGTGGATCTATATGCTTGCGAATGTCTCTAGTCTGTaGATCAAACCAGTGACTTATGTCCTGGCCTGCGAC | + |
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Preference number: 6 (lower is better) Translates to: EWIYMLANVSSL*IKPVTYVLACD Trigger: GTCGCAGGCCAGGACATAAGTCACTGGTTTGATCCACAGACTAGAGACATTCGCAAGCATATAGATCCACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051620.5 ENSMUST00000108660.8 |
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| CDS GCA 72 bp | CATCGTATTTCCATGTGTAGCTGCAGTGTGTGCTCCTaGGTTGCAAGAGTGTTAATAATACGGATGTTCCGG | + |
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Preference number: 6 (lower is better) Translates to: HRISMCSCSVCS*VARVLIIRMFR Trigger: CCGGAACATCCGTATTATTAACACTCTTGCAACGCAGGAGCACACACTGCAGCTACACATGGAAATACGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108660.8 |
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| CDS GCA 72 bp | GTACGGTATCTCATGCAACCAGTGAGTGGATCTATATaGTTGCGAATGTCTCTAGTCTGTGGATCAAACCAG | + |
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Preference number: 6 (lower is better) Translates to: VRYLMQPVSGSI*LRMSLVCGSNQ Trigger: CTGGTTTGATCCACAGACTAGAGACATTCGCAAGCATATAGATCCACTCACTGGTTGCATGAGATACCGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051620.5 ENSMUST00000108660.8 |
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| CDS GCA 72 bp | TCTTCCCATCGTATTTCCATGTGTAGCTGCAGTGTGTaGTCCTGCGTTGCAAGAGTGTTAATAATACGGATG | + |
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Preference number: 6 (lower is better) Translates to: SSHRISMCSCSV*SCVARVLIIRM Trigger: CATCCGTATTATTAACACTCTTGCAACGCAGGAGCACACACTGCAGCTACACATGGAAATACGATGGGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108660.8 |
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| CDS CAA 90 bp | GTCAAACTCTTCTTCCTCATCCCGGATCCCGTTTTCTTCCAGGGTTaGATCCATGTTCAAATTCTTCCCATCGTATTTCCATGTGTAGCT | + |
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Preference number: 6 (lower is better) Translates to: VKLFFLIPDPVFFQG*IHVQILPIVFPCVA Trigger: AGCTACACATGGAAATACGATGGGAAGAATTTGAACATGGATCAAACCCTGGAAGAAAACGGGATCCGGGATGAGGAAGAAGAGTTTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051620.5 |
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| CDS CCA 72 bp | TGTTCAAATTCTTCCCATCGTATTTCCATGTGTAGCTaGCAGCATGTGCATTATAGGGGAGATAGCGGTGTA | + |
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Preference number: 6 (lower is better) Translates to: CSNSSHRISMCS*QHVHYRGDSGV Trigger: TACACCGCTATCTCCCCTATAATGCACATGCTGCCAGCTACACATGGAAATACGATGGGAAGAATTTGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051620.5 |
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| CDS GCA 72 bp | TGTTCAAATTCTTCCCATCGTATTTCCATGTGTAGCTaGAGTGTGTGCTCCTGCGTTGCAAGAGTGTTAATA | + |
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Preference number: 6 (lower is better) Translates to: CSNSSHRISMCS*SVCSCVARVLI Trigger: TATTAACACTCTTGCAACGCAGGAGCACACACTGCAGCTACACATGGAAATACGATGGGAAGAATTTGAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108660.8 |
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